AIH curated blacklist: matched 6 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 117
Pass (FILTER=PASS): 18 (15.4%)
Fail (FILTER=FAIL): 99 (84.6%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 6
All 6 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high): 10
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 10
confidence_below_min(medium<high): 9
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 8
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 1
aih_curated_blacklist: 1
Breakdown by confidence:
high: 18 pass, 1 fail (total: 19)
low: 0 pass, 77 fail (total: 77)
medium: 0 pass, 21 fail (total: 21)
Arriba filter: 117 rows -> 18 PASS; wrote V4_0001_RNA_0005_23H5VFLT4_s17.arriba.fusions.filtered.tsv and V4_0001_RNA_0005_23H5VFLT4_s17.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0005_23H5VFLT4_s17.arriba.fusions.filter_summary.txt