AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 170
Pass (FILTER=PASS): 8 (4.7%)
Fail (FILTER=FAIL): 162 (95.3%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 75
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 18
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 10
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 8
confidence_below_min(low<high): 6
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
aih_curated_blacklist: 1
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 8 pass, 5 fail (total: 13)
low: 0 pass, 64 fail (total: 64)
medium: 0 pass, 93 fail (total: 93)
Arriba filter: 170 rows -> 8 PASS; wrote tih_rna_sample_00220_23H5VFLT4_s16.arriba.fusions.filtered.tsv and tih_rna_sample_00220_23H5VFLT4_s16.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00220_23H5VFLT4_s16.arriba.fusions.filter_summary.txt