Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/d0d6add0619ce5804c4647bdd5cfc6/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/dc47c0b35562882cea0f8b7d155270/tih_rna_sample_00220_23H5VFLT4_s16.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d2/d0d6add0619ce5804c4647bdd5cfc6/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory