-ctat genome lib [/tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir] validates. CMD: mkdir -p /tmp/nxf.sDIpBicufv/./_starF_checkpoints CMD: mkdir -p /tmp/nxf.sDIpBicufv/./star-fusion.preliminary -sample contains 55119781 rnaseq fragments * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.map_chimeric_reads_to_genes --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir -J /tmp/nxf.sDIpBicufv/tih_rna_sample_00105_23H5VFLT4_s21.Chimeric.out.junction -O /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --CPU 4 -parsing fusion evidence: /tmp/nxf.sDIpBicufv/tih_rna_sample_00105_23H5VFLT4_s21.Chimeric.out.junction -building interval tree based on /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.10 min). -mapping reads to genes [10000], rate=54545.45/min [20000], rate=57142.86/min [30000], rate=62068.97/min [40000], rate=63157.89/min [50000], rate=61224.49/min [60000], rate=65454.55/min [70000], rate=68852.46/min [80000], rate=72727.27/min [90000], rate=75000.00/min [100000], rate=66666.67/min [110000], rate=61682.24/min [120000], rate=58536.59/min [130000], rate=54545.45/min [140000], rate=53164.56/min [150000], rate=51724.14/min [160000], rate=50793.65/min [170000], rate=50000.00/min [180000], rate=49541.28/min [190000], rate=49350.65/min [200000], rate=49180.33/min [210000], rate=49218.75/min [220000], rate=49253.73/min [230000], rate=49285.71/min [240000], rate=49484.54/min [250000], rate=49833.89/min [260000], rate=49840.26/min [270000], rate=49846.15/min [280000], rate=50000.00/min [290000], rate=50289.02/min [300000], rate=50561.80/min [310000], rate=51098.90/min [320000], rate=51752.02/min [330000], rate=52380.95/min [340000], rate=52987.01/min [350000], rate=53708.44/min [360000], rate=54271.36/min [370000], rate=54411.76/min [380000], rate=54807.69/min [390000], rate=55058.82/min [400000], rate=55555.56/min [410000], rate=56036.45/min [420000], rate=56629.21/min [430000], rate=57206.21/min [440000], rate=58149.78/min [450000], rate=58823.53/min [460000], rate=59611.23/min [470000], rate=60385.44/min [480000], rate=61016.95/min [490000], rate=61506.28/min [500000], rate=61983.47/min [510000], rate=62704.92/min [520000], rate=62903.23/min [530000], rate=63600.00/min [540000], rate=64031.62/min [550000], rate=64579.26/min [560000], rate=65242.72/min [570000], rate=65391.97/min [580000], rate=65909.09/min [590000], rate=66168.22/min [600000], rate=66914.50/min [610000], rate=67403.31/min [620000], rate=67513.61/min [630000], rate=67620.75/min [640000], rate=67964.60/min [650000], rate=68301.23/min [660000], rate=68275.86/min [670000], rate=68367.35/min [680000], rate=68571.43/min [690000], rate=68885.19/min [700000], rate=69306.93/min [710000], rate=69607.84/min [720000], rate=69677.42/min [730000], rate=68867.92/min [740000], rate=68307.69/min [750000], rate=67873.30/min [760000], rate=67355.98/min [770000], rate=66956.52/min [780000], rate=66571.83/min [790000], rate=66386.55/min [800000], rate=66298.34/min [810000], rate=66212.53/min [820000], rate=66129.03/min [830000], rate=66047.75/min [840000], rate=65968.59/min [850000], rate=65976.71/min [860000], rate=65984.65/min [870000], rate=66159.70/min [880000], rate=66331.66/min [890000], rate=66500.62/min [900000], rate=66831.68/min [910000], rate=66504.26/min [920000], rate=66187.05/min [930000], rate=65957.45/min [940000], rate=65810.97/min [950000], rate=65743.94/min [960000], rate=65753.42/min [970000], rate=65688.49/min [980000], rate=65478.84/min [990000], rate=65490.63/min -building interval tree based on /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=85714.29/min [20000], rate=80000.00/min [30000], rate=85714.29/min [40000], rate=72727.27/min [50000], rate=61224.49/min [60000], rate=57142.86/min [70000], rate=54545.45/min [80000], rate=52747.25/min [90000], rate=51923.08/min [100000], rate=51282.05/min [110000], rate=50769.23/min [120000], rate=50349.65/min [130000], rate=50322.58/min [140000], rate=50602.41/min [150000], rate=51136.36/min [160000], rate=52173.91/min [170000], rate=52849.74/min [180000], rate=53465.35/min [190000], rate=54028.44/min [200000], rate=54794.52/min [210000], rate=55752.21/min [220000], rate=56170.21/min [230000], rate=55200.00/min [240000], rate=54752.85/min [250000], rate=54744.53/min [260000], rate=54736.84/min [270000], rate=54545.45/min [280000], rate=54723.13/min [290000], rate=55063.29/min [300000], rate=55214.72/min [310000], rate=55357.14/min [320000], rate=55652.17/min [330000], rate=55774.65/min [340000], rate=56198.35/min [350000], rate=56603.77/min [360000], rate=57142.86/min [370000], rate=57662.34/min [380000], rate=58163.27/min [390000], rate=58064.52/min [400000], rate=57831.33/min [410000], rate=57476.64/min [420000], rate=57142.86/min [430000], rate=57079.65/min [440000], rate=56896.55/min [450000], rate=56842.11/min [460000], rate=56790.12/min [470000], rate=56969.70/min [480000], rate=56917.00/min [490000], rate=56866.54/min [500000], rate=56926.00/min [510000], rate=57089.55/min [520000], rate=57352.94/min [530000], rate=57504.52/min [540000], rate=57754.01/min [550000], rate=58201.06/min [560000], rate=58638.74/min [570000], rate=59067.36/min [580000], rate=58883.25/min [590000], rate=58609.27/min [600000], rate=58536.59/min [610000], rate=58466.45/min [620000], rate=58398.74/min [630000], rate=58423.49/min [640000], rate=58625.95/min [650000], rate=58912.39/min [660000], rate=59016.39/min [670000], rate=59292.04/min [680000], rate=59475.22/min [690000], rate=59826.59/min [700000], rate=60344.83/min [710000], rate=61031.52/min [720000], rate=61714.29/min [730000], rate=62039.66/min [740000], rate=61924.69/min [750000], rate=61813.19/min [760000], rate=61621.62/min [770000], rate=61764.71/min [780000], rate=61660.08/min [790000], rate=61799.22/min [800000], rate=62015.50/min [810000], rate=62148.34/min [820000], rate=62357.41/min [830000], rate=62799.50/min [840000], rate=63000.00/min [850000], rate=63354.04/min [860000], rate=63703.70/min [870000], rate=64049.08/min [880000], rate=63845.22/min [890000], rate=63723.15/min [900000], rate=63679.25/min [910000], rate=63562.28/min [920000], rate=63594.47/min [930000], rate=63626.00/min [940000], rate=63585.12/min [950000], rate=63616.07/min [960000], rate=63716.81/min [970000], rate=63885.84/min [980000], rate=64122.14/min [990000], rate=64355.36/min -building interval tree based on /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=27272.73/min [20000], rate=30769.23/min [30000], rate=32142.86/min [40000], rate=33802.82/min [50000], rate=35294.12/min [60000], rate=36363.64/min [70000], rate=36842.11/min [80000], rate=38400.00/min [90000], rate=40909.09/min [100000], rate=43165.47/min [110000], rate=45205.48/min [120000], rate=47368.42/min [130000], rate=49367.09/min [140000], rate=50299.40/min [150000], rate=51724.14/min [160000], rate=52747.25/min [170000], rate=53684.21/min [180000], rate=55384.62/min [190000], rate=56716.42/min [200000], rate=56603.77/min [210000], rate=56250.00/min [220000], rate=56410.26/min [230000], rate=56557.38/min [240000], rate=56692.91/min [250000], rate=57034.22/min [260000], rate=57352.94/min [270000], rate=57857.14/min [280000], rate=58741.26/min [290000], rate=59589.04/min [300000], rate=60402.68/min [310000], rate=60983.61/min [320000], rate=60567.82/min [330000], rate=60182.37/min [340000], rate=60176.99/min [350000], rate=60000.00/min [360000], rate=60335.20/min [370000], rate=60821.92/min [380000], rate=61126.01/min [390000], rate=61578.95/min [400000], rate=61855.67/min [410000], rate=61346.63/min [420000], rate=61165.05/min [430000], rate=60992.91/min [440000], rate=60829.49/min [450000], rate=60810.81/min [460000], rate=60792.95/min [470000], rate=60775.86/min [480000], rate=61016.95/min [490000], rate=60869.57/min [500000], rate=60851.93/min [510000], rate=61077.84/min [520000], rate=61056.75/min [530000], rate=61036.47/min [540000], rate=61132.08/min [550000], rate=61338.29/min [560000], rate=61202.19/min [570000], rate=61180.68/min [580000], rate=61375.66/min [590000], rate=61565.22/min [600000], rate=61855.67/min [610000], rate=61824.32/min [620000], rate=61794.02/min [630000], rate=61865.79/min [640000], rate=62035.54/min [650000], rate=62200.96/min [660000], rate=62559.24/min [670000], rate=62910.80/min [680000], rate=62385.32/min [690000], rate=61883.41/min [700000], rate=61493.41/min [710000], rate=61383.29/min [720000], rate=61363.64/min [730000], rate=61258.74/min [740000], rate=61241.38/min [750000], rate=61058.34/min [760000], rate=61208.05/min [770000], rate=61436.17/min [780000], rate=61498.03/min [790000], rate=61398.96/min [800000], rate=61459.67/min [810000], rate=61675.13/min [820000], rate=61731.49/min [830000], rate=62017.43/min [840000], rate=62299.13/min [850000], rate=62347.19/min [860000], rate=62697.45/min [870000], rate=62815.88/min [880000], rate=62932.06/min [890000], rate=63120.57/min [900000], rate=63380.28/min [910000], rate=63341.07/min [920000], rate=63013.70/min [930000], rate=62696.63/min [940000], rate=62320.44/min [950000], rate=62023.94/min [960000], rate=61868.96/min [970000], rate=61717.92/min [980000], rate=61506.28/min [990000], rate=61363.64/min -building interval tree based on /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir/ref_annot.gtf.mini.sortu -done building interval tree (0.12 min). -mapping reads to genes [10000], rate=120000.00/min [20000], rate=109090.91/min [30000], rate=105882.35/min [40000], rate=120000.00/min [50000], rate=125000.00/min [60000], rate=112500.00/min [70000], rate=110526.32/min [80000], rate=109090.91/min [90000], rate=110204.08/min [100000], rate=117647.06/min [110000], rate=115789.47/min [120000], rate=116129.03/min [130000], rate=114705.88/min [140000], rate=112000.00/min [150000], rate=115384.62/min [160000], rate=115662.65/min [170000], rate=114606.74/min [180000], rate=114893.62/min [190000], rate=112871.29/min [200000], rate=114285.71/min [210000], rate=106779.66/min [220000], rate=92957.75/min [230000], rate=85714.29/min [240000], rate=79558.01/min [250000], rate=74257.43/min [260000], rate=71232.88/min [270000], rate=68354.43/min [280000], rate=65882.35/min [290000], rate=63970.59/min [300000], rate=62500.00/min [310000], rate=60983.61/min [320000], rate=60000.00/min [330000], rate=59281.44/min [340000], rate=58620.69/min [350000], rate=58171.75/min [360000], rate=57600.00/min [370000], rate=57216.49/min [380000], rate=56716.42/min [390000], rate=56521.74/min [400000], rate=56074.77/min [410000], rate=55909.09/min [420000], rate=55752.21/min [430000], rate=55723.54/min [440000], rate=55696.20/min [450000], rate=55785.12/min [460000], rate=55870.45/min [470000], rate=55952.38/min [480000], rate=56140.35/min [490000], rate=56321.84/min [500000], rate=56603.77/min [510000], rate=56983.24/min [520000], rate=57352.94/min [530000], rate=57713.25/min [540000], rate=58168.76/min [550000], rate=58098.59/min [560000], rate=58031.09/min [570000], rate=57770.27/min [580000], rate=57711.44/min [590000], rate=57560.98/min [600000], rate=57507.99/min [610000], rate=57637.80/min [620000], rate=57943.93/min [630000], rate=58064.52/min [640000], rate=58270.11/min [650000], rate=58646.62/min [660000], rate=59016.39/min [670000], rate=59379.62/min [680000], rate=59736.46/min [690000], rate=60000.00/min [700000], rate=60258.25/min [710000], rate=60597.44/min [720000], rate=60167.13/min [730000], rate=59754.43/min [740000], rate=59597.32/min [750000], rate=59445.18/min [760000], rate=59297.79/min [770000], rate=59230.77/min [780000], rate=59165.61/min [790000], rate=58881.99/min [800000], rate=58679.71/min [810000], rate=58413.46/min [820000], rate=58224.85/min [830000], rate=58041.96/min [840000], rate=57997.70/min [850000], rate=57888.76/min [860000], rate=57847.53/min [870000], rate=57871.40/min [880000], rate=57768.05/min [890000], rate=57917.57/min [900000], rate=58002.15/min [910000], rate=58085.11/min [920000], rate=58350.95/min [930000], rate=58429.32/min [940000], rate=58627.86/min [950000], rate=58823.53/min [960000], rate=58715.60/min [970000], rate=58375.13/min [980000], rate=58217.82/min [990000], rate=58064.52/min * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.handle_multimapping_reads -J /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir --filt_file /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.fail -M 50 > /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -parsing /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt, organizing read mapping info. 6000000.00 reads per min processed... 6000000.00 reads per min processed... 4500000.00 reads per min processed... 4800000.00 reads per min processed... 4285714.29 reads per min processed... 4000000.00 reads per min processed... 4200000.00 reads per min processed... 4000000.00 reads per min processed... 4153846.15 reads per min processed... 4000000.00 reads per min processed... 4125000.00 reads per min processed... 4000000.00 reads per min processed... 3714285.71 reads per min processed... 3818181.82 reads per min processed... 3750000.00 reads per min processed... 3692307.69 reads per min processed... 3777777.78 reads per min processed... 3724137.93 reads per min processed... 3800000.00 reads per min processed... 3870967.74 reads per min processed... 3937500.00 reads per min processed... 3882352.94 reads per min processed... 3942857.14 reads per min processed... 4000000.00 reads per min processed... 3947368.42 reads per min processed... 4000000.00 reads per min processed... 4050000.00 reads per min processed... 4000000.00 reads per min processed... 4046511.63 reads per min processed... 4000000.00 reads per min processed... 4043478.26 reads per min processed... done. * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.predict -J /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -O /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion -parsing fusion evidence: /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.junction_breakpts_to_genes.txt.pass -outputting fusion candidates to file: /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary * Running CMD: /usr/local/src/STAR-Fusion/util/STAR-Fusion.filter --fusion_preds /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary -J /tmp/nxf.sDIpBicufv/tih_rna_sample_00105_23H5VFLT4_s21.Chimeric.out.junction --tmpdir /tmp --min_junction_reads 0 --min_sum_frags 1 --require_LDAS 0 --max_promiscuity 10 --min_pct_dom_promiscuity 20 --min_novel_junction_support 1 --min_alt_pct_junction 10 --aggregate_novel_junction_dist 5 --min_spanning_frags_only 1 --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir --out_prefix /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion CMD: mkdir -p /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir EM: Starting log likelihood: -96835.864977 EM: Round [1] log likelihood: -96782.783770 EM: Round [2] log likelihood: -96760.453339 EM: Round [3] log likelihood: -96749.072209 EM: Round [4] log likelihood: -96742.826459 EM: Round [5] log likelihood: -96739.265714 EM: Round [6] log likelihood: -96737.164944 EM: Round [7] log likelihood: -96735.879219 EM: Round [8] log likelihood: -96735.062223 EM: Round [9] log likelihood: -96734.524062 EM: Round [10] log likelihood: -96734.157719 EM: Round [11] log likelihood: -96733.900938 EM: Round [12] log likelihood: -96733.716278 EM: Round [13] log likelihood: -96733.580464 EM: Round [14] log likelihood: -96733.478575 EM: Round [15] log likelihood: -96733.400769 EM: Round [16] log likelihood: -96733.340389 EM: Round [17] log likelihood: -96733.292834 EM: Round [18] log likelihood: -96733.254861 EM: Round [19] log likelihood: -96733.224146 EM: Round [20] log likelihood: -96733.199001 EM: Round [21] log likelihood: -96733.178182 EM: Round [22] log likelihood: -96733.160764 EM: Round [23] log likelihood: -96733.146048 EM: Round [24] log likelihood: -96733.133504 EM: Round [25] log likelihood: -96733.122723 EM: Round [26] log likelihood: -96733.113390 EM: Round [27] log likelihood: -96733.105255 EM: Round [28] log likelihood: -96733.098124 EM: Round [29] log likelihood: -96733.091838 EM: Round [30] log likelihood: -96733.086272 EM: Round [31] log likelihood: -96733.081324 EM: Round [32] log likelihood: -96733.076909 EM: Round [33] log likelihood: -96733.072957 EM: Round [34] log likelihood: -96733.069409 EM: Round [35] log likelihood: -96733.066218 EM: Round [36] log likelihood: -96733.063341 EM: Round [37] log likelihood: -96733.060742 EM: Round [38] log likelihood: -96733.058391 EM: Round [39] log likelihood: -96733.056262 EM: Round [40] log likelihood: -96733.054331 EM: Round [41] log likelihood: -96733.052577 EM: Round [42] log likelihood: -96733.050984 EM: Round [43] log likelihood: -96733.049535 EM: Round [44] log likelihood: -96733.048216 EM: Round [45] log likelihood: -96733.047015 EM: Round [46] log likelihood: -96733.045921 EM: Round [47] log likelihood: -96733.044924 EM: Round [48] log likelihood: -96733.044014 EM: Round [49] log likelihood: -96733.043183 EM: Round [50] log likelihood: -96733.042426 EM: Round [51] log likelihood: -96733.041733 EM: Round [52] log likelihood: -96733.041101 EM: Round [53] log likelihood: -96733.040523 EM: Round [54] log likelihood: -96733.039995 EM: Round [55] log likelihood: -96733.039513 EM: Round [56] log likelihood: -96733.039071 EM: Round [57] log likelihood: -96733.038667 EM: Round [58] log likelihood: -96733.038297 EM: Round [59] log likelihood: -96733.037959 EM: Round [60] log likelihood: -96733.037649 EM: Round [61] log likelihood: -96733.037365 EM: Round [62] log likelihood: -96733.037105 EM: Round [63] log likelihood: -96733.036867 EM: Round [64] log likelihood: -96733.036649 EM: Round [65] log likelihood: -96733.036449 EM: Round [66] log likelihood: -96733.036265 EM: Round [67] log likelihood: -96733.036097 EM: Round [68] log likelihood: -96733.035943 EM: Round [69] log likelihood: -96733.035801 EM: Round [70] log likelihood: -96733.035671 EM: Round [71] log likelihood: -96733.035551 EM: Round [72] log likelihood: -96733.035441 EM: Round [73] log likelihood: -96733.035340 EM: Round [74] log likelihood: -96733.035248 EM: Stopping iterations at round 74 due to insufficient improvement in likelihood. EM: Starting log likelihood: -96797.859715 EM: Round [1] log likelihood: -96752.224921 EM: Round [2] log likelihood: -96733.813872 EM: Round [3] log likelihood: -96724.696667 EM: Round [4] log likelihood: -96719.792681 EM: Round [5] log likelihood: -96717.046948 EM: Round [6] log likelihood: -96715.458094 EM: Round [7] log likelihood: -96714.505933 EM: Round [8] log likelihood: -96713.913835 EM: Round [9] log likelihood: -96713.531754 EM: Round [10] log likelihood: -96713.276308 EM: Round [11] log likelihood: -96713.099823 EM: Round [12] log likelihood: -96712.974192 EM: Round [13] log likelihood: -96712.882321 EM: Round [14] log likelihood: -96712.813491 EM: Round [15] log likelihood: -96712.760785 EM: Round [16] log likelihood: -96712.719620 EM: Round [17] log likelihood: -96712.686887 EM: Round [18] log likelihood: -96712.660431 EM: Round [19] log likelihood: -96712.638731 EM: Round [20] log likelihood: -96712.620693 EM: Round [21] log likelihood: -96712.605518 EM: Round [22] log likelihood: -96712.592614 EM: Round [23] log likelihood: -96712.581538 EM: Round [24] log likelihood: -96712.571950 EM: Round [25] log likelihood: -96712.563589 EM: Round [26] log likelihood: -96712.556252 EM: Round [27] log likelihood: -96712.549778 EM: Round [28] log likelihood: -96712.544038 EM: Round [29] log likelihood: -96712.538928 EM: Round [30] log likelihood: -96712.534362 EM: Round [31] log likelihood: -96712.530270 EM: Round [32] log likelihood: -96712.526593 EM: Round [33] log likelihood: -96712.523281 EM: Round [34] log likelihood: -96712.520293 EM: Round [35] log likelihood: -96712.517593 EM: Round [36] log likelihood: -96712.515148 EM: Round [37] log likelihood: -96712.512933 EM: Round [38] log likelihood: -96712.510923 EM: Round [39] log likelihood: -96712.509098 EM: Round [40] log likelihood: -96712.507439 EM: Round [41] log likelihood: -96712.505931 EM: Round [42] log likelihood: -96712.504558 EM: Round [43] log likelihood: -96712.503308 EM: Round [44] log likelihood: -96712.502170 EM: Round [45] log likelihood: -96712.501132 EM: Round [46] log likelihood: -96712.500186 EM: Round [47] log likelihood: -96712.499324 EM: Round [48] log likelihood: -96712.498537 EM: Round [49] log likelihood: -96712.497819 EM: Round [50] log likelihood: -96712.497163 EM: Round [51] log likelihood: -96712.496565 EM: Round [52] log likelihood: -96712.496018 EM: Round [53] log likelihood: -96712.495519 EM: Round [54] log likelihood: -96712.495063 EM: Round [55] log likelihood: -96712.494647 EM: Round [56] log likelihood: -96712.494266 EM: Round [57] log likelihood: -96712.493919 EM: Round [58] log likelihood: -96712.493601 EM: Round [59] log likelihood: -96712.493310 EM: Round [60] log likelihood: -96712.493045 EM: Round [61] log likelihood: -96712.492802 EM: Round [62] log likelihood: -96712.492580 EM: Round [63] log likelihood: -96712.492376 EM: Round [64] log likelihood: -96712.492191 EM: Round [65] log likelihood: -96712.492021 EM: Round [66] log likelihood: -96712.491865 EM: Round [67] log likelihood: -96712.491723 EM: Round [68] log likelihood: -96712.491593 EM: Round [69] log likelihood: -96712.491474 EM: Round [70] log likelihood: -96712.491365 EM: Round [71] log likelihood: -96712.491265 EM: Stopping iterations at round 71 due to insufficient improvement in likelihood. CMD: /usr/local/src/STAR-Fusion/util/../FusionFilter/blast_and_promiscuity_filter.pl --out_prefix /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion --max_promiscuity 10 --min_pct_dom_promiscuity 20 --fusion_preds /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/blast_filter.pl --fusion_preds /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/promiscuity_filter.pl --fusion_preds /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir --max_promiscuity 10 --min_pct_dom_promiscuity 20 CMD: cp /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.pre_blast_filter.post_blast_filter.post_promisc_filter /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter JunctionReads,SpanningFrags > /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter.abridged CMD: ln -sf /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.filter.intermediates_dir/star-fusion.post_blast_and_promiscuity_filter /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered * Running CMD: /usr/local/src/STAR-Fusion/util/incorporate_FFPM_into_final_report.pl /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered 55119781 > /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM * Running CMD: /usr/local/src/STAR-Fusion/util/append_breakpoint_junction_info.pl /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.filtered.FFPM /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir > /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/FusionAnnotator --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir --annotate /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo > /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot * Running CMD: /usr/local/src/STAR-Fusion/FusionFilter/util/filter_by_annotation_rules.pl --fusions /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir -done, see /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass * Running CMD: /usr/local/src/STAR-Fusion/util/filter_likely_RT_artifacts.pl --fusions /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir -filter_likely_RT_artifacts: (pass: 732, filtered: 7089) * Running CMD: /usr/local/src/STAR-Fusion/util/filter_by_min_FFPM.pl /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass 0.00001 * Running CMD: cp /tmp/nxf.sDIpBicufv/./star-fusion.preliminary/star-fusion.fusion_candidates.preliminary.wSpliceInfo.wAnnot.annot_filter.pass.RTartifact.pass.minFFPM.0.00001.pass star-fusion.fusion_predictions.tsv * Running CMD: /usr/local/src/STAR-Fusion/util/column_exclusions.pl star-fusion.fusion_predictions.tsv JunctionReads,SpanningFrags > star-fusion.fusion_predictions.abridged.tsv * Running CMD: /usr/local/src/STAR-Fusion/FusionAnnotator/util/fusion_to_coding_region_effect.pl --fusions star-fusion.fusion_predictions.abridged.tsv --genome_lib_dir /tmp/nxf.sDIpBicufv/ctat_genome_lib_build_dir > star-fusion.fusion_predictions.abridged.coding_effect.tsv WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000280136.2] WARNING, no entry stored in dbm for [ENSG00000214765.8] WARNING, no entry stored in dbm for [ENSG00000236116.1] WARNING, no entry stored in dbm for [ENSG00000265369.3] WARNING, no entry stored in dbm for [ENSG00000214070.3] WARNING, no entry stored in dbm for [ENSG00000225851.1] WARNING, no entry stored in dbm for [ENSG00000225465.10] WARNING, no entry stored in dbm for [ENSG00000185837.3] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000235749.3] WARNING, no entry stored in dbm for [ENSG00000260236.1] WARNING, no entry stored in dbm for [ENSG00000250980.1] WARNING, no entry stored in dbm for [ENSG00000225178.5] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000281896.1] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000279217.1] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000282458.1] WARNING, no entry stored in dbm for [ENSG00000234769.7] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000146556.14] WARNING, no entry stored in dbm for [ENSG00000225174.2] WARNING, no entry stored in dbm for [ENSG00000229124.7] WARNING, no entry stored in dbm for [ENSG00000205485.13] WARNING, no entry stored in dbm for [ENSG00000270661.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000207456.1] WARNING, no entry stored in dbm for [ENSG00000187172.15] WARNING, no entry stored in dbm for [ENSG00000188185.13] WARNING, no entry stored in dbm for [ENSG00000256181.1] WARNING, no entry stored in dbm for [ENSG00000234406.1] WARNING, no entry stored in dbm for [ENSG00000215296.10] WARNING, no entry stored in dbm for [ENSG00000228862.4] WARNING, no entry stored in dbm for [ENSG00000224597.10] WARNING, no entry stored in dbm for [ENSG00000264538.6] WARNING, no entry stored in dbm for [ENSG00000204044.6] WARNING, no entry stored in dbm for [ENSG00000257611.1] WARNING, no entry stored in dbm for [ENSG00000226631.1] WARNING, no entry stored in dbm for [ENSG00000260727.2] WARNING, no entry stored in dbm for [ENSG00000272779.1] WARNING, no entry stored in dbm for [ENSG00000262801.6] WARNING, no entry stored in dbm for [ENSG00000276772.1] WARNING, no entry stored in dbm for [ENSG00000267244.5] WARNING, no entry stored in dbm for [ENSG00000286017.1] WARNING, no entry stored in dbm for [ENSG00000283259.1] WARNING, no entry stored in dbm for [ENSG00000248445.5] WARNING, no entry stored in dbm for [ENSG00000247950.7] WARNING, no entry stored in dbm for [ENSG00000286020.1] WARNING, no entry stored in dbm for [ENSG00000224904.1] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000231280.1] WARNING, no entry stored in dbm for [ENSG00000184319.16] WARNING, no entry stored in dbm for [ENSG00000230559.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278591.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000275219.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274062.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274862.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278774.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000277903.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000276596.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000278048.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274432.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000273709.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000275616.1] WARNING, no entry stored in dbm for [ENSG00000222355.1] WARNING, no entry stored in dbm for [ENSG00000274585.1] WARNING, no entry stored in dbm for [ENSG00000200296.1] WARNING, no entry stored in dbm for [ENSG00000253832.1] WARNING, no entry stored in dbm for [ENSG00000278887.2] WARNING, no entry stored in dbm for [ENSG00000234171.3] WARNING, no entry stored in dbm for [ENSG00000241032.3] WARNING, no entry stored in dbm for [ENSG00000240877.3] WARNING, no entry stored in dbm for [ENSG00000241032.3] WARNING, no entry stored in dbm for [ENSG00000241406.3] WARNING, no entry stored in dbm for [ENSG00000239899.3] WARNING, no entry stored in dbm for [ENSG00000239316.3] WARNING, no entry stored in dbm for [ENSG00000200966.1] WARNING, no entry stored in dbm for [ENSG00000222068.1] WARNING, no entry stored in dbm for [ENSG00000200131.1] WARNING, no entry stored in dbm for [ENSG00000222068.1] WARNING, no entry stored in dbm for [ENSG00000200131.1] WARNING, no entry stored in dbm for [ENSG00000201027.1] WARNING, no entry stored in dbm for [ENSG00000223202.1] WARNING, no entry stored in dbm for [ENSG00000200966.1] WARNING, no entry stored in dbm for [ENSG00000199420.1] WARNING, no entry stored in dbm for [ENSG00000201078.1] WARNING, no entry stored in dbm for [ENSG00000201794.1] WARNING, no entry stored in dbm for [ENSG00000200131.1] WARNING, no entry stored in dbm for [ENSG00000285257.1] WARNING, no entry stored in dbm for [ENSG00000279905.1] WARNING, no entry stored in dbm for [ENSG00000259516.2] WARNING, no entry stored in dbm for [ENSG00000283103.3] WARNING, no entry stored in dbm for [ENSG00000270025.2] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000227358.1] WARNING, no entry stored in dbm for [ENSG00000227195.11] WARNING, no entry stored in dbm for [ENSG00000228737.2] WARNING, no entry stored in dbm for [ENSG00000230487.8] WARNING, no entry stored in dbm for [ENSG00000267313.7] WARNING, no entry stored in dbm for [ENSG00000287353.1] WARNING, no entry stored in dbm for [ENSG00000287649.1] WARNING, no entry stored in dbm for [ENSG00000258526.7] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000197185.7] WARNING, no entry stored in dbm for [ENSG00000235919.4] WARNING, no entry stored in dbm for [ENSG00000275131.3] WARNING, no entry stored in dbm for [ENSG00000254539.1] WARNING, no entry stored in dbm for [ENSG00000189223.15] WARNING, no entry stored in dbm for [ENSG00000239883.8] WARNING, no entry stored in dbm for [ENSG00000251079.6] WARNING, no entry stored in dbm for [ENSG00000226616.1] WARNING, no entry stored in dbm for [ENSG00000236432.8] WARNING, no entry stored in dbm for [ENSG00000185495.10] WARNING, no entry stored in dbm for [ENSG00000223705.9] WARNING, no entry stored in dbm for [ENSG00000210176.1] WARNING, no entry stored in dbm for [ENSG00000215086.2] WARNING, no entry stored in dbm for [ENSG00000189238.6] WARNING, no entry stored in dbm for [ENSG00000287044.1] WARNING, no entry stored in dbm for [ENSG00000266179.2] WARNING, no entry stored in dbm for [ENSG00000228323.2] WARNING, no entry stored in dbm for [ENSG00000283426.1] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000198727.2] WARNING, no entry stored in dbm for [ENSG00000229739.4] WARNING, no entry stored in dbm for [ENSG00000287721.1] WARNING, no entry stored in dbm for [ENSG00000215386.13] WARNING, no entry stored in dbm for [ENSG00000172965.17] WARNING, no entry stored in dbm for [ENSG00000234231.4] WARNING, no entry stored in dbm for [ENSG00000233325.3] WARNING, no entry stored in dbm for [ENSG00000230387.4] WARNING, no entry stored in dbm for [ENSG00000248677.2] WARNING, no entry stored in dbm for [ENSG00000200101.1] WARNING, no entry stored in dbm for [ENSG00000207115.1] WARNING, no entry stored in dbm for [ENSG00000207291.1] WARNING, no entry stored in dbm for [ENSG00000201641.1] WARNING, no entry stored in dbm for [ENSG00000226277.2] WARNING, no entry stored in dbm for [ENSG00000260440.3] WARNING, no entry stored in dbm for [ENSG00000236303.4] WARNING, no entry stored in dbm for [ENSG00000251363.3] WARNING, no entry stored in dbm for [ENSG00000204283.4] WARNING, no entry stored in dbm for [ENSG00000279579.3] WARNING, no entry stored in dbm for [ENSG00000261008.7] WARNING, no entry stored in dbm for [ENSG00000227964.1] WARNING, no entry stored in dbm for [ENSG00000224559.2] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000229723.1] WARNING, no entry stored in dbm for [ENSG00000249069.8] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000235687.9] WARNING, no entry stored in dbm for [ENSG00000234918.1] WARNING, no entry stored in dbm for [ENSG00000225269.3] WARNING, no entry stored in dbm for [ENSG00000256642.1] WARNING, no entry stored in dbm for [ENSG00000198744.5] WARNING, no entry stored in dbm for [ENSG00000266820.1] WARNING, no entry stored in dbm for [ENSG00000241059.2] WARNING, no entry stored in dbm for [ENSG00000224344.1] WARNING, no entry stored in dbm for [ENSG00000250344.1] WARNING, no entry stored in dbm for [ENSG00000235978.6] WARNING, no entry stored in dbm for [ENSG00000255141.1] WARNING, no entry stored in dbm for [ENSG00000243753.5] WARNING, no entry stored in dbm for [ENSG00000214922.9] WARNING, no entry stored in dbm for [ENSG00000253549.6] WARNING, no entry stored in dbm for [ENSG00000281344.1] WARNING, no entry stored in dbm for [ENSG00000251596.1] WARNING, no entry stored in dbm for [ENSG00000241549.8] WARNING, no entry stored in dbm for [ENSG00000280128.1] WARNING, no entry stored in dbm for [ENSG00000284376.1] WARNING, no entry stored in dbm for [ENSG00000244144.1] WARNING, no entry stored in dbm for [ENSG00000247679.3] WARNING, no entry stored in dbm for [ENSG00000288090.1] WARNING, no entry stored in dbm for [ENSG00000216360.1] WARNING, no entry stored in dbm for [ENSG00000259345.7] WARNING, no entry stored in dbm for [ENSG00000233485.1] WARNING, no entry stored in dbm for [ENSG00000286212.2] WARNING, no entry stored in dbm for [ENSG00000180178.11] WARNING, no entry stored in dbm for [ENSG00000285035.1] WARNING, no entry stored in dbm for [ENSG00000280339.1] WARNING, no entry stored in dbm for [ENSG00000258454.1] WARNING, no entry stored in dbm for [ENSG00000230239.1] WARNING, no entry stored in dbm for [ENSG00000237296.9] WARNING, no entry stored in dbm for [ENSG00000268120.1] WARNING, no entry stored in dbm for [ENSG00000283907.1] WARNING, no entry stored in dbm for [ENSG00000275897.1] WARNING, no entry stored in dbm for [ENSG00000226609.2] WARNING, no entry stored in dbm for [ENSG00000240429.1] WARNING, no entry stored in dbm for [ENSG00000222041.11] WARNING, no entry stored in dbm for [ENSG00000237206.1] WARNING, no entry stored in dbm for [ENSG00000282164.3] WARNING, no entry stored in dbm for [ENSG00000231171.4] WARNING, no entry stored in dbm for [ENSG00000279249.3] WARNING, no entry stored in dbm for [ENSG00000261840.3] WARNING, no entry stored in dbm for [ENSG00000257122.5] WARNING, no entry stored in dbm for [ENSG00000241170.3] WARNING, no entry stored in dbm for [ENSG00000276868.1] WARNING, no entry stored in dbm for [ENSG00000234715.2] WARNING, no entry stored in dbm for [ENSG00000270641.1] WARNING, no entry stored in dbm for [ENSG00000230681.1] WARNING, no entry stored in dbm for [ENSG00000261670.1] WARNING, no entry stored in dbm for [ENSG00000196796.5] WARNING, no entry stored in dbm for [ENSG00000236830.7] WARNING, no entry stored in dbm for [ENSG00000230773.9] WARNING, no entry stored in dbm for [ENSG00000214548.18] WARNING, no entry stored in dbm for [ENSG00000254451.2] WARNING, no entry stored in dbm for [ENSG00000229097.1] WARNING, no entry stored in dbm for [ENSG00000249252.5] WARNING, no entry stored in dbm for [ENSG00000267567.1] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000237480.3] WARNING, no entry stored in dbm for [ENSG00000285756.2] WARNING, no entry stored in dbm for [ENSG00000237480.3] WARNING, no entry stored in dbm for [ENSG00000205534.6] WARNING, no entry stored in dbm for [ENSG00000261556.10] WARNING, no entry stored in dbm for [ENSG00000287918.1] WARNING, no entry stored in dbm for [ENSG00000231607.13] WARNING, no entry stored in dbm for [ENSG00000203987.3] WARNING, no entry stored in dbm for [ENSG00000257252.6] WARNING, no entry stored in dbm for [ENSG00000253408.6] WARNING, no entry stored in dbm for [ENSG00000235774.2] WARNING, no entry stored in dbm for [ENSG00000254590.1] WARNING, no entry stored in dbm for [ENSG00000256448.5] WARNING, no entry stored in dbm for [ENSG00000241231.2] WARNING, no entry stored in dbm for [ENSG00000280414.1] WARNING, no entry stored in dbm for [ENSG00000244306.11] WARNING, no entry stored in dbm for [ENSG00000230021.10] WARNING, no entry stored in dbm for [ENSG00000285079.1] WARNING, no entry stored in dbm for [ENSG00000228818.1] WARNING, no entry stored in dbm for [ENSG00000279096.2] WARNING, no entry stored in dbm for [ENSG00000230074.3] WARNING, no entry stored in dbm for [ENSG00000223546.7] WARNING, no entry stored in dbm for [ENSG00000287991.1] WARNING, no entry stored in dbm for [ENSG00000258458.8] WARNING, no entry stored in dbm for [ENSG00000279609.1] WARNING, no entry stored in dbm for [ENSG00000258504.2] WARNING, no entry stored in dbm for [ENSG00000287727.1] WARNING, no entry stored in dbm for [ENSG00000220685.3] WARNING, no entry stored in dbm for [ENSG00000214812.3] WARNING, no entry stored in dbm for [ENSG00000279080.1] WARNING, no entry stored in dbm for [ENSG00000173209.23] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000230869.1] WARNING, no entry stored in dbm for [ENSG00000283907.1] WARNING, no entry stored in dbm for [ENSG00000231713.2] WARNING, no entry stored in dbm for [ENSG00000248692.5] WARNING, no entry stored in dbm for [ENSG00000212694.8] WARNING, no entry stored in dbm for [ENSG00000277125.1] WARNING, no entry stored in dbm for [ENSG00000229848.1] WARNING, no entry stored in dbm for [ENSG00000215158.9] WARNING, no entry stored in dbm for [ENSG00000278212.2] WARNING, no entry stored in dbm for [ENSG00000279283.1] WARNING, no entry stored in dbm for [ENSG00000284675.1] WARNING, no entry stored in dbm for [ENSG00000279174.1] WARNING, no entry stored in dbm for [ENSG00000251314.2] WARNING, no entry stored in dbm for [ENSG00000260594.1] WARNING, no entry stored in dbm for [ENSG00000224536.2] WARNING, no entry stored in dbm for [ENSG00000269292.1] WARNING, no entry stored in dbm for [ENSG00000279536.1] WARNING, no entry stored in dbm for [ENSG00000256625.1] WARNING, no entry stored in dbm for [ENSG00000231304.2] WARNING, no entry stored in dbm for [ENSG00000276538.1] WARNING, no entry stored in dbm for [ENSG00000224016.2] WARNING, no entry stored in dbm for [ENSG00000259299.1] WARNING, no entry stored in dbm for [ENSG00000229212.8] WARNING, no entry stored in dbm for [ENSG00000249921.2] WARNING, no entry stored in dbm for [ENSG00000260693.1] WARNING, no entry stored in dbm for [ENSG00000239533.6] WARNING, no entry stored in dbm for [ENSG00000285751.1] WARNING, no entry stored in dbm for [ENSG00000270815.1] WARNING, no entry stored in dbm for [ENSG00000264112.1] WARNING, no entry stored in dbm for [ENSG00000255060.1] WARNING, no entry stored in dbm for [ENSG00000274220.1] WARNING, no entry stored in dbm for [ENSG00000268204.1] WARNING, no entry stored in dbm for [ENSG00000286220.1] WARNING, no entry stored in dbm for [ENSG00000230305.2] WARNING, no entry stored in dbm for [ENSG00000239556.4] WARNING, no entry stored in dbm for [ENSG00000228434.1] WARNING, no entry stored in dbm for [ENSG00000277283.1] * STAR-Fusion complete. See output: /tmp/nxf.sDIpBicufv/./star-fusion.fusion_predictions.tsv (or .abridged.tsv version)