AIH curated blacklist: matched 3 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 60
Pass (FILTER=PASS): 11 (18.3%)
Fail (FILTER=FAIL): 49 (81.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 3
All 3 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 5
confidence_below_min(medium<high): 5
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 3
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(low<high): 2
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 1
confidence_below_min(low<high);total_reads_below_min(2.0<8.0);aih_curated_blacklist: 1
Breakdown by confidence:
high: 11 pass, 0 fail (total: 11)
low: 0 pass, 26 fail (total: 26)
medium: 0 pass, 23 fail (total: 23)
Arriba filter: 60 rows -> 11 PASS; wrote tih_rna_sample_00420_23H5VFLT4_s45.arriba.fusions.filtered.tsv and tih_rna_sample_00420_23H5VFLT4_s45.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00420_23H5VFLT4_s45.arriba.fusions.filter_summary.txt