.command.log - Workdir - NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00400_23H5VFLT4_s27)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/4c7f8355ce3400ac1dbf765e22d42b/.command.log
Size: 510 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (tih_rna_sample_00400_23H5VFLT4_s27)
Attempt

Content

  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/dd/a1619b01db2b6a03bf646a16a45ae0/tih_rna_sample_00400_23H5VFLT4_s27.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/4c7f8355ce3400ac1dbf765e22d42b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/08/4c7f8355ce3400ac1dbf765e22d42b/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory