[W::hts_idx_load3] The index file is older than the data file: tih_rna_sample_00088_23H5VFLT4_s02.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	348974128
Known Splicing Events:	346436961
Partial Novel Splicing Events:	1516642
Novel Splicing Events:	911565
Filtered Splicing Events:	108960

Total splicing  Junctions:	524408
Known Splicing Junctions:	268218
Partial Novel Splicing Junctions:	138433
Novel Splicing Junctions:	117757

===================================================================
Create BED file ...
Create Interact file ...