Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/70/444a4a563b71eaad4fb7edb5ef1214/tih_rna_sample_00088_23H5VFLT4_s02.Aligned.sortedByCoord.out.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/e4f49c816de281bfb2458bf64d0768/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/e4f49c816de281bfb2458bf64d0768/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.csi: No such file or directory
ls: *.crai: No such file or directory