AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 57
Pass (FILTER=PASS): 12 (21.1%)
Fail (FILTER=FAIL): 45 (78.9%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 11
confidence_below_min(medium<high): 6
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 3
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 2
total_reads_below_min(5.0<8.0): 2
confidence_below_min(medium<high);aih_curated_blacklist: 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 2
total_reads_below_min(6.0<8.0);aih_curated_blacklist: 1
total_reads_below_min(4.0<8.0): 1
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0);aih_curated_blacklist: 1
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 1
confidence_below_min(low<high): 1
Breakdown by confidence:
high: 12 pass, 4 fail (total: 16)
low: 0 pass, 29 fail (total: 29)
medium: 0 pass, 12 fail (total: 12)
Arriba filter: 57 rows -> 12 PASS; wrote V4_0001_RNA_0005_23H5VFLT4_s37.arriba.fusions.filtered.tsv and V4_0001_RNA_0005_23H5VFLT4_s37.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0005_23H5VFLT4_s37.arriba.fusions.filter_summary.txt