.command.sh - Workdir - NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (tih_rna_sample_00117_23H5VFLT4_s37)

File Info

Filename: .command.sh
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e5/6d0fdd9acedd7969ca0fa062c596e4/.command.sh
Size: 269 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (tih_rna_sample_00117_23H5VFLT4_s37)
Attempt

Content

#!/bin/bash -euo pipefail
cancer_introns_to_vcf.py \
    --input tih_rna_sample_00117_23H5VFLT4_s37.cancer.introns

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF":
    python: $(python --version | sed 's/Python //g')
END_VERSIONS