AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
================================================================================
ARRIBA FILTERING SUMMARY
================================================================================
Total fusions: 330
Pass (FILTER=PASS): 44 (13.3%)
Fail (FILTER=FAIL): 286 (86.7%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 70
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 42
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 24
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 22
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 22
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(medium<high);total_reads_below_min(7.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 13
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high): 11
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 9
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 3
Breakdown by confidence:
high: 44 pass, 6 fail (total: 50)
low: 0 pass, 115 fail (total: 115)
medium: 0 pass, 165 fail (total: 165)
Arriba filter: 330 rows -> 44 PASS; wrote tih_rna_sample_00097_23H5VFLT4_s12.arriba.fusions.filtered.tsv and tih_rna_sample_00097_23H5VFLT4_s12.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00097_23H5VFLT4_s12.arriba.fusions.filter_summary.txt