AIH curated blacklist: matched 7 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 115
Pass (FILTER=PASS): 17 (14.8%)
Fail (FILTER=FAIL): 98 (85.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 7
All 7 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 14
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 11
confidence_below_min(medium<high): 6
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 3
confidence_below_min(low<high): 3
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 3
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 2
aih_curated_blacklist: 1
total_reads_below_min(5.0<8.0): 1
total_reads_below_min(4.0<8.0): 1
Breakdown by confidence:
high: 17 pass, 4 fail (total: 21)
low: 0 pass, 78 fail (total: 78)
medium: 0 pass, 16 fail (total: 16)
Arriba filter: 115 rows -> 17 PASS; wrote V4_0001_RNA_0005_23H5VFLT4_s19.arriba.fusions.filtered.tsv and V4_0001_RNA_0005_23H5VFLT4_s19.arriba.fusions.filtered_pass_only.tsv
Summary written to: V4_0001_RNA_0005_23H5VFLT4_s19.arriba.fusions.filter_summary.txt