AIH curated blacklist: matched 10 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 280
Pass (FILTER=PASS): 19 (6.8%)
Fail (FILTER=FAIL): 261 (93.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 10
All 10 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 89
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 43
confidence_below_min(low<high): 24
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 16
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 11
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 8
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 7
confidence_below_min(low<high);total_reads_below_min(7.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 5
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 5
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);aih_curated_blacklist: 4
total_reads_below_min(3.0<8.0): 4
Breakdown by confidence:
high: 19 pass, 7 fail (total: 26)
low: 0 pass, 128 fail (total: 128)
medium: 0 pass, 126 fail (total: 126)
Arriba filter: 280 rows -> 19 PASS; wrote tih_rna_sample_00248_23H5VFLT4_s01.arriba.fusions.filtered.tsv and tih_rna_sample_00248_23H5VFLT4_s01.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00248_23H5VFLT4_s01.arriba.fusions.filter_summary.txt