Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fd/c66f9efe96cbd6c3778badd3dfb07c/tih_rna_sample_00248_23H5VFLT4_s01.star_alignment.Aligned.sortedByCoord.out.cram
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/e298d76eaa5f90758569187f9431a5/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0c/e298d76eaa5f90758569187f9431a5/.command.run
==> STAGING COMPLETE (3 inputs)

ls: *.bai: No such file or directory
ls: *.csi: No such file or directory