NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (HD789_0002_RNA_0008_23H5VFLT4_s19) - dev_rna_exp0001_exp0003_73d51683 - Workflow Tracker

Runs
dev_rna_exp0..03_73d51683
Tasks
GATK4_MARKDUPLICATES (HD789_0002_RNA_0008_23H5VFLT4_s19)

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Task Info

Status: succeeded
Hash: f4ea9b91c7d5
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: HD789_0002_RNA_0008_23H5VFLT4_s19
Attempts: 1

Attempt 1

Execution

Status: succeeded
Hash: 5c/3869b5
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/3869b5b040ac19e4585648c358fd9f
Native ID: nf-5c3869b5b040ac19e4585648c358fd9f-07652

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 59.3 GB / 74.0 GB
Process I/O (rchar / wchar): 63.1 GB / 44.1 GB
Disk I/O (read / write): 20.6 GB / 44.1 GB
Host: i-063de8159ba871cf6 ( spot)

Runtime

Submitted: Jun 08, 2026 1:25:43 AM
Completed: Jun 08, 2026 2:14:11 AM
Total Duration: 48m 27s

Phases

Queue: 2s
Execution: 46m 17s
Stage/Unstage: 2m 8s