#!/bin/bash -euo pipefail
cat V4_0001_RNA_0001_23H5VFLT4_s13_S61_L005_R1_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L006_R1_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L007_R1_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L008_R1_001.fastq.gz > V4_0001_RNA_0001_23H5VFLT4_s13_R1.fastq.gz
cat V4_0001_RNA_0001_23H5VFLT4_s13_S61_L005_R2_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L006_R2_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L007_R2_001.fastq.gz V4_0001_RNA_0001_23H5VFLT4_s13_S61_L008_R2_001.fastq.gz > V4_0001_RNA_0001_23H5VFLT4_s13_R2.fastq.gz

cat <<-END_VERSIONS > versions.yml
"NFCORE_RNAFUSION:DEMUX_FROM_RUNDIR:DEMULTIPLEX:CAT_FASTQ":
    cat: $(cat --version | head -1 | awk '{print $NF}')
END_VERSIONS