AIH curated blacklist: matched 4 fusion rows (breakpoint_ID in qualified set)
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ARRIBA FILTERING SUMMARY
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Total fusions: 183
Pass (FILTER=PASS): 7 (3.8%)
Fail (FILTER=FAIL): 176 (96.2%)
AIH curated blacklist (blacklisted flag):
Total blacklisted: 4
All 4 blacklisted rows have FILTER=FAIL
Failure reasons (top 15):
confidence_below_min(medium<high): 88
confidence_below_min(low<high);total_reads_below_min(4.0<8.0): 15
confidence_below_min(low<high);total_reads_below_min(1.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(0.0<8.0): 12
confidence_below_min(low<high);total_reads_below_min(3.0<8.0): 10
confidence_below_min(low<high);total_reads_below_min(2.0<8.0): 6
confidence_below_min(low<high);total_reads_below_min(5.0<8.0): 6
confidence_below_min(low<high): 6
confidence_below_min(medium<high);aih_curated_blacklist: 4
confidence_below_min(medium<high);total_reads_below_min(5.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(3.0<8.0): 4
confidence_below_min(medium<high);total_reads_below_min(6.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(4.0<8.0): 2
confidence_below_min(medium<high);total_reads_below_min(2.0<8.0): 2
confidence_below_min(low<high);total_reads_below_min(6.0<8.0): 2
Breakdown by confidence:
high: 7 pass, 0 fail (total: 7)
low: 0 pass, 69 fail (total: 69)
medium: 0 pass, 107 fail (total: 107)
Arriba filter: 183 rows -> 7 PASS; wrote tih_rna_sample_00116_23H5VFLT4_s36.arriba.fusions.filtered.tsv and tih_rna_sample_00116_23H5VFLT4_s36.arriba.fusions.filtered_pass_only.tsv
Summary written to: tih_rna_sample_00116_23H5VFLT4_s36.arriba.fusions.filter_summary.txt