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tih_rna_sample_00298_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/tih_rna_sample_00298_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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8.6 KB
Workflow Run
dev_rna_exp0002_2cae617
Published
May 16, 2026 6:17 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
GPBP1L1--STIL 632 9 632.00 9.00 GPBP1L1^ENSG00000159592.11 16117 chr1:45633489:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 1630 450 0.39 1.42 GT 1.8323 AG 1.9656 2.1562 913 0
GPBP1L1--STIL 46 0 46.00 0.00 GPBP1L1^ENSG00000159592.11 12881 chr1:45640210:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 2304 450 0.02 0.10 GT 1.6729 AG 1.9656 0.1547 1270 0
GPBP1L1--STIL 1 1 1.00 0.00 GPBP1L1^ENSG00000159592.11 15510 chr1:45634096:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 3025 450 0.00 0.01 GT 1.9656 AG 1.9656 0.0034 350 0
STX16--NPEPL1 265 6 265.00 6.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1097 41 0.25 6.48 GT 1.7968 AG 1.8256 0.9116 1940 0
STX16--NPEPL1 8 0 8.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1071 41 0.01 0.21 GT 1.8062 AG 1.8256 0.0269 2729 0
STX16--NPEPL1 2 0 2.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1864 41 0.00 0.07 GT 1.9899 AG 1.8256 0.0067 1258 0
STX16--NPEPL1 1 0 1.00 0.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 19290 chr20:58693737:+ ONLY_REF_SPLICE YES 1097 2158 0.00 0.00 GT 1.7968 AG 1.7819 0.0034 1248 0
TMEM59--CDH6 227 1 227.00 1.00 TMEM59^ENSG00000116209.12 1505 chr1:54053000:- CDH6^ENSG00000113361.13 37509 chr5:31322818:+ ONLY_REF_SPLICE YES 2528 116 0.09 1.96 GT 1.6895 AG 1.8323 0.767 338 0
TMEM59--CDH6 2 0 2.00 0.00 TMEM59^ENSG00000116209.12 1149 chr1:54053356:- CDH6^ENSG00000113361.13 37509 chr5:31322818:+ ONLY_REF_SPLICE YES 43 116 0.07 0.03 GT 1.9899 AG 1.8323 0.0067 25 1
FBXO25--AC240565.1 194 0 194.00 0.00 FBXO25^ENSG00000147364.17 7247 chr8:435707:+ AC240565.1^ENSG00000280136.2 27298 chr17:106864:- ONLY_REF_SPLICE YES 203 35 0.96 5.42 GT 1.7819 AG 1.8892 0.6526 7162 0
FBXO25--AC240565.1 1 0 1.00 0.00 FBXO25^ENSG00000147364.17 4937 chr8:431444:+ AC240565.1^ENSG00000280136.2 27298 chr17:106864:- ONLY_REF_SPLICE YES 158 35 0.01 0.06 GT 1.3383 AG 1.8892 0.0034 5533 0
PSMB2--CCDC30 169 3 169.00 3.00 PSMB2^ENSG00000126067.12 4735 chr1:35609246:- CCDC30^ENSG00000186409.18 42853 chr1:42566296:+ ONLY_REF_SPLICE YES 1315 41 0.13 4.12 GT 1.8323 AG 1.9329 0.5786 3429 0
PSMB2--CCDC30 1 0 1.00 0.00 PSMB2^ENSG00000126067.12 4735 chr1:35609246:- CCDC30^ENSG00000186409.18 44256 chr1:42577020:+ ONLY_REF_SPLICE YES 1315 143 0.00 0.01 GT 1.8323 AG 1.6402 0.0034 2172 0
TLK2--AC240565.1 106 1 106.00 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 377 35 0.29 3.00 GT 1.8892 AG 1.8892 0.36 1734 0
PRKAA1--C5orf51 62 0 62.00 0.00 PRKAA1^ENSG00000132356.11 1312 chr5:40798063:- C5orf51^ENSG00000205765.9 19564 chr5:41907736:+ ONLY_REF_SPLICE YES 863 301 0.07 0.21 GT 1.8323 AG 1.4566 0.2086 1753 0
PPIH--TCEANC2 58 5 58.00 1.98 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 21855 chr1:54098206:+ INCL_NON_REF_SPLICE YES 1498 8 0.04 7.11 GT 1.5058 AG 1.7819 0.2018 1191 0
PPIH--TCEANC2 44 10 44.00 6.61 PPIH^ENSG00000171960.12 7277 chr1:42666711:+ TCEANC2^ENSG00000116205.14 19949 chr1:54096300:+ INCL_NON_REF_SPLICE YES 1397 76 0.04 0.71 AA 1.9656 TG 1.5058 0.1702 1130 0
PPIH--TCEANC2 45 2 45.00 0.44 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 30732 chr1:54111052:+ ONLY_REF_SPLICE YES 1498 3 0.03 12.00 GT 1.5058 AG 1.9329 0.1529 994 0
PPIH--TCEANC2 42 3 42.00 0.68 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 28985 chr1:54105336:+ INCL_NON_REF_SPLICE YES 1498 7 0.03 5.75 GT 1.5058 AG 1.9656 0.1436 1000 0
PPIH--TCEANC2 5 4 5.00 0.12 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 28214 chr1:54104565:+ INCL_NON_REF_SPLICE YES 1498 96 0.01 0.10 GT 1.5058 AG 1.8323 0.0172 338 0
PPIH--TCEANC2 3 6 3.00 0.16 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 20258 chr1:54096609:+ INCL_NON_REF_SPLICE YES 1498 31 0.01 0.31 GT 1.5058 AG 1.8323 0.0106 1242 0
PTPRF--LINC01707 56 1 56.00 0.80 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 47783 chr1:69189628:+ ONLY_REF_SPLICE YES 3024 3 0.02 14.50 GT 1.9656 AG 1.8256 0.1911 3559 0
PTPRF--LINC01707 14 1 14.00 0.20 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 45473 chr1:69182770:+ ONLY_REF_SPLICE YES 3024 0 0.01 16.00 GT 1.9656 AG 1.8256 0.0478 1386 0
PTPRF--LINC01707 2 0 2.00 0.00 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 54732 chr1:69218364:+ ONLY_REF_SPLICE YES 3024 1 0.00 1.50 GT 1.9656 AG 1.9899 0.0067 841 0
PTPRF--LINC01707 1 0 1.00 0.00 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 48918 chr1:69192434:+ ONLY_REF_SPLICE YES 3024 0 0.00 2.00 GT 1.9656 AG 1.9219 0.0034 2625 0
TESK2--USP24 55 1 55.00 1.00 TESK2^ENSG00000070759.17 3742 chr1:45421725:- USP24^ENSG00000162402.14 46618 chr1:55121506:- ONLY_REF_SPLICE YES 109 350 0.52 0.16 GT 1.8062 AG 1.5301 0.1884 4180 0
TPPP--TESK2 38 0 38.00 0.00 TPPP^ENSG00000171368.12 2390 chr5:677750:- TESK2^ENSG00000070759.17 13965 chr1:45457871:- ONLY_REF_SPLICE YES 216 29 0.18 1.30 GT 1.8892 AG 1.8295 0.1278 2159 0
TPPP--TESK2 4 0 4.00 0.00 TPPP^ENSG00000171368.12 2390 chr5:677750:- TESK2^ENSG00000070759.17 15273 chr1:45421846:- ONLY_REF_SPLICE YES 216 186 0.02 0.03 GT 1.8892 AG 1.9329 0.0135 3007 0
TPPP--TESK2 2 0 2.00 0.00 TPPP^ENSG00000171368.12 1075 chr5:693278:- TESK2^ENSG00000070759.17 13965 chr1:45457871:- ONLY_REF_SPLICE YES 48 29 0.06 0.10 GT 1.8892 AG 1.8295 0.0067 3376 0
TPPP--TESK2 1 0 1.00 0.00 TPPP^ENSG00000171368.12 1075 chr5:693278:- TESK2^ENSG00000070759.17 15273 chr1:45421846:- ONLY_REF_SPLICE YES 48 186 0.04 0.01 GT 1.8892 AG 1.9329 0.0034 3972 0
THRAP3--AL031985.4 33 0 33.00 0.00 THRAP3^ENSG00000054118.15 7911 chr1:36289764:+ AL031985.4^ENSG00000284677.1 21297 chr1:40438566:- ONLY_REF_SPLICE YES 799 0 0.04 34.00 GT 1.9086 AG 1.7819 0.111 1171 0
THRAP3--AL031985.4 1 0 1.00 0.00 THRAP3^ENSG00000054118.15 7911 chr1:36289764:+ AL031985.4^ENSG00000284677.1 22544 chr1:40436611:- ONLY_REF_SPLICE YES 799 2 0.00 0.67 GT 1.9086 AG 1.8295 0.0034 1054 0
EPS15--CLSPN 29 0 29.00 0.00 EPS15^ENSG00000085832.17 2110 chr1:51481273:- CLSPN^ENSG00000092853.14 53633 chr1:35739529:- ONLY_REF_SPLICE YES 472 94 0.06 0.32 GT 1.7232 AG 1.5219 0.0975 2717 0
GHR--LIFR-AS1 28 1 28.00 1.00 GHR^ENSG00000112964.14 8230 chr5:42565944:+ LIFR-AS1^ENSG00000244968.7 34187 chr5:38594922:+ ONLY_REF_SPLICE YES 120 0 0.25 30.00 GT 1.7819 AG 1.5058 0.0976 3172 0
SYNJ2--SNX9 27 0 27.00 0.00 SYNJ2^ENSG00000078269.15 8770 chr6:158033680:+ SNX9^ENSG00000130340.17 73566 chr6:157942791:+ ONLY_REF_SPLICE YES 357 842 0.08 0.03 GT 1.6895 AG 1.8892 0.0908 1362 0
RBFOX1--PPIE 26 0 26.00 0.00 RBFOX1^ENSG00000078328.22 5626 chr16:5867335:+ PPIE^ENSG00000084072.17 73756 chr1:39763689:+ ONLY_REF_SPLICE YES 303 159 0.09 0.17 GT 1.7819 AG 1.5546 0.0875 1616 0
RBFOX1--PPIE 9 0 9.00 0.00 RBFOX1^ENSG00000078328.22 5626 chr16:5867335:+ PPIE^ENSG00000084072.17 72621 chr1:39762517:+ ONLY_REF_SPLICE YES 303 128 0.03 0.08 GT 1.7819 AG 1.9219 0.0303 1736 0
CPLANE1--FAAH 18 0 18.00 0.00 CPLANE1^ENSG00000197603.16 22475 chr5:37195858:- FAAH^ENSG00000117480.16 65668 chr1:46402091:+ ONLY_REF_SPLICE YES 122 1355 0.15 0.01 GT 1.9219 AG 1.7819 0.0605 2730 0
MTMR12--AC093277.1 15 0 15.00 0.00 MTMR12^ENSG00000150712.11 1230 chr5:32312758:- AC093277.1^ENSG00000283286.1 26868 chr5:40429932:+ ONLY_REF_SPLICE YES 261 3 0.06 4.00 GT 1.9656 AG 1.9899 0.0505 734 0
NDST1--TENM4 8 0 8.00 0.00 NDST1^ENSG00000070614.15 1590 chr5:150486407:+ TENM4^ENSG00000149256.16 72380 chr11:78712714:- ONLY_REF_SPLICE YES 20 40 0.43 0.22 GT 1.6895 AG 1.8323 0.0269 2499 0
NDST1--TENM4 7 0 7.00 0.00 NDST1^ENSG00000070614.15 1206 chr5:150486023:+ TENM4^ENSG00000149256.16 72380 chr11:78712714:- INCL_NON_REF_SPLICE YES 14 40 0.53 0.20 GT 1.6402 AG 1.8323 0.0235 2521 0
NDST1--TENM4 2 0 2.00 0.00 NDST1^ENSG00000070614.15 1186 chr5:150486003:+ TENM4^ENSG00000149256.16 72380 chr11:78712714:- ONLY_REF_SPLICE YES 13 40 0.21 0.07 GT 1.7968 AG 1.8323 0.0067 2524 0
NDST1--TENM4 1 0 1.00 0.00 NDST1^ENSG00000070614.15 1186 chr5:150486003:+ TENM4^ENSG00000149256.16 73613 chr11:78708515:- ONLY_REF_SPLICE YES 13 64 0.14 0.03 GT 1.7968 AG 1.9656 0.0034 1315 0
44 rows