File Info
- Filename
- FFPE_HD835_01_RNA_0001_23LGNLLT4_3.starfusion.starfusion.fusion_predictions.filtered.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/FFPE_HD835_01_RNA_0001_23LGNLLT4_3.starfusion.starfusion.fusion_predictions.filtered.tsv
- Size
- 1.0 MB
- Workflow Run
- dev_rna_exp0002_2cae617
- Published
- May 16, 2026 6:24 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | SpliceType | LeftGene | LeftBreakpoint | RightGene | RightBreakpoint | JunctionReads | SpanningFrags | LargeAnchorSupport | FFPM | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | annots | breakpoint_ID | blacklisted | blacklist_reasons | aih_curated_reason | CALL | filter_reason | FILTER | total_reads | |||||||
| PANK2--MAVS | 1282 | 29 | 1282.0 | 29.0 | ONLY_REF_SPLICE | PANK2^ENSG00000125779.23 | chr20:3889728:+ | MAVS^ENSG00000088888.18 | chr20:3854558:+ | 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35_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2159:39759:29067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:30973:5918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2163:46361:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2164:30868:15993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2164:7933:21500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:11687:8244,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:46757:26951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:50357:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:51037:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:21856:9295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2171:8774:8749,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2172:19437:10626,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2172:8629:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2175:12811:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2175:46102:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2176:1833:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2178:35601:18894,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:24995:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:27430:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2180:11735:2555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:25359:11860,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:3168:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2183:5579:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2183:7165:10024,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2185:13815:18039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2186:25529:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2187:24162:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2187:45301:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2188:32956:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2189:29517:24246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2190:51732:5918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:35196:27946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2193:36871:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2194:3864:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2195:49079:3368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2195:49758:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2196:2278:14059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:18207:2864,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:29364:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:31386:13751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:45042:23420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:40536:29431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:7286:25143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:8394:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2205:24129:21864,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2205:8888:26825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2206:28021:20813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2206:48068:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:3160:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2213:50875:5134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:23288:27049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:33360:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2215:15125:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2217:48480:13905,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2217:48755:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:11808:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:27470:7165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2222:5458:5386,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2223:16622:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2223:24833:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2225:17609:8104,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2227:20141:3522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2228:29711:13289,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:35140:4979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:35585:9618,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00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| &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1147:24016:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1148:41968:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:34768:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1217:27284:17324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1242:39258:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1275:5797:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1292:7019:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1348:1769:3424,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1366:46733:3340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1410:37761:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:40609:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2171:38966:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2259:43303:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2293:6453:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2496:45188:3971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:33109:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:20295:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:44006:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:15683:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:9389:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:20982:9968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:14599:3620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:32624:14858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:50341:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:20683:21276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:18677:28086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:24655:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:12682:24373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:12520:26250 | YES_LDAS | 4.4354 | GT | 1.5656 | AG | 1.5628 | "[""Klijn_CellLines"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[12716]""]" | chr20:3889728-chr20:3854558 | False | 1 | PASS | 1311 | ||||||||||
| TCF7L2--AL158212.1 | 745 | 26 | 745.0 | 20.12 | ONLY_REF_SPLICE | TCF7L2^ENSG00000148737.17 | chr10:113040126:+ | AL158212.1^ENSG00000225292.2 | chr10:112888735:+ | 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T4_3@LH00166:237:23LGNLLT4:2:2448:16921:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:2925:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2456:18167:18375,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2456:45317:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2456:9664:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:50576:22467,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:12140:22873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:6946:6871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2475:49289:18109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:23959:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2480:7140:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:37122:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:5239:16498,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2491:27568:27147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1101:37098:5960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:44330:19945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1116:20254:3522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:23595:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:33053:6213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1129:38837:17941,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:35512:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:39937:15839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:6817:4909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:41167:22957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:42356:23588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:40423:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:43084:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:37397:20799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:45503:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:47809:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:12828:22215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:34258:19342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:37947:18249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:4422:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:44484:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:32931:28618,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:20238:17675,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:14996:20505,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:28231:27848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:12965:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:44637:20505,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:9122:23868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:22997:1434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1181:40868:8230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:19162:13261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:33554:14144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:13426:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:32324:19608,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:6614:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1204:35010:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:34776:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:19227:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:15683:6114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:16395:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1220:15554:8553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1221:15975:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1221:36200:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:37963:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1227:6768:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1231:14955:23350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:33684:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:44322:18585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1238:50470:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:35035:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:12342:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:31888:22355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1246:11169:17324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1248:23612:22649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:16962:21612,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1251:28838:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1259:25715:27189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1263:47307:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:47793:1757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:40940:22817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1274:42032:29585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:3937:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:34218:9239,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:47186:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:21905:25297,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:10465:20841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:3856:1687,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:3961:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:45972:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1316:47760:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:21832:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:42057:8216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:48747:5176,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1332:11865:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1332:31240:26867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1332:4163:2023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1333:6679:16666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1333:7254:24415 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1244:19219:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1293:13030:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:26953:16498,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:42146:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2245:21047:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:26103:7992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:48707:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:25019:10234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:15627:1589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2348:46919:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2402:11752:13849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2407:12553:5064,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:21856:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:6962:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:21185:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:42494:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:20173:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:10117:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:37640:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:39039:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961 | YES_LDAS | 2.5886 | GT | 1.9219 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]" | chr10:113040126-chr10:112888735 | False | 1 | PASS | 771 | ||||||||||
| COMMD10--AP3S1 | 277 | 20 | 277.0 | 20.0 | ONLY_REF_SPLICE | COMMD10^ENSG00000145781.9 | chr5:116092700:+ | AP3S1^ENSG00000177879.17 | chr5:115895087:+ | 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T4_3@LH00166:237:23LGNLLT4:1:2116:42752:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2119:37445:23350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2125:17407:25381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2125:34800:3466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2127:6550:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2129:17496:29543,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2140:8508:24653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:46425:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:4333:21318,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:19518:23322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:26419:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2158:9050:12392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2161:2853:26096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2169:21597:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2184:46709:21822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:46328:29095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:35067:12532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2201:26289:13415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2207:44589:19132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2207:51943:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2208:40649:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2209:15133:24162,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2212:9276:10739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2223:45665:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2225:24704:7446,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2229:12075:29347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:40940:24358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2232:39290:16708,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2239:32098:2569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:14478:4951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:36418:2121,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2244:2602:12546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:1510:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2255:39128:10094,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2265:33570:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2271:45163:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2279:24979:3018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2291:51862:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2298:38254:3116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2302:7440:28800,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2310:19647:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2332:25780:20799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2353:36580:18319,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2354:44015:5302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2356:5474:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2360:24081:28786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2371:38627:14998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2375:4721:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2380:12464:16231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2382:26265:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2392:16355:1925,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2393:22463:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2396:22074:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2408:36984:29221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2414:26750:10010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2419:11412:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2430:32058:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2435:31232:22341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2442:38085:18067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2450:41531:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2451:24679:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:34266:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2475:31127:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2486:33837:9085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2490:29889:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:4681:10654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:15101:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:42388:1841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1130:8321:12728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:20100:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:7699:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:30229:10262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:17034:11677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:17738:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:22333:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:51643:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:44055:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:10304:29277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:49297:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:13879:9856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:19591:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:12601:21262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:48456:5960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:34064:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1206:47040:2191,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1214:44095:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:39614:15251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:27956:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:17860:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:36887:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:30229:20827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:11533:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:41248:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:32511:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:42704:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:33020:22691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:7189:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:41126:9015,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:25569:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:44921:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:51320:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:12811:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:52153:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:2189:3816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:37793:1729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:41935:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:10117:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1302:27948:3452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:51215:27301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:34072:17478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:19162:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:16064:7306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:21832:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:41960:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:45179:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:5619:5806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1349:37907:17506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1356:38578:22313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:30059:3298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:36046:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1385:30909:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:18434:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:32907:24737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:43125:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:46272:11761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:46215:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1453:27543:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:49945:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:5781:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:9778:7684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1464:21581:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:21638:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:48140:7348,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:7278:6661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:14292:19819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:46029:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2103:39330:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:14543:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:10562:15208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:47526:1715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:14535:7600,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2136:42599:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:46369:1701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:47437:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:39258:12504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:44241:22649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2207:11711:8370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2224:14624:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2224:22981:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:32721:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:26888:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:44144:20463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:44298:15096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:12253:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2265:15109:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:3451:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:50268:23252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2294:27034:20449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2308:17034:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:45479:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:26775:15096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:45802:11874,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:11177:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:21727:7754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:18167:24597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2357:36944:9758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:43335:23238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2362:11355:9183,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:31354:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:29016:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2407:18790:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2422:16169:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:30650:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:45002:7151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:10061:26054,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:42752:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:28393:13051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:49775:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:5805:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:29679:12252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:29719:10472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:3508:1476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:34509:29277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:30059:24569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:17940:19636,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:52007:27721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:12731:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:12739:22481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:23579:25143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:45333:15405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:16144:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38360:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:37001:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:4325:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:39654:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:37219:14942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:8038:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:22673:27525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:35107:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:50487:9505,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:26694:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1216:46895:7207,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:50066:27161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:36046:14844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:5247:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:1914:19790,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:46563:7081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:26532:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1284:13046:1967,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:39913:14368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1313:8985:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:21079:13499 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1161:48707:12644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1180:18620:22299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1219:3929:18179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1365:46029:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1398:28433:6619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1452:27058:1827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1472:27729:25325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1482:3556:18627,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:31871:7165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2232:46660:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2274:40665:8777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2441:1380:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1107:46741:7165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:50228:14634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44387:20715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:51821:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:8710:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:26055:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:39783:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:29833:2653 | YES_LDAS | 1.0049 | GT | 1.9329 | AG | 1.8256 | "[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.17Mb]""]" | chr5:116092700-chr5:115895087 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 297 | ||||||
| LEPROT--LEPR | 268 | 8 | 268.0 | 8.0 | ONLY_REF_SPLICE | LEPROT^ENSG00000213625.9 | chr1:65425378:+ | LEPR^ENSG00000116678.20 | chr1:65565546:+ | 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NA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:22762:11285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1468:28571:17226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:24137:15517,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1473:15724:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:35836:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:27543:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2107:11218:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:6590:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:41167:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:3265:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:23749:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2133:11007:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:37445:15475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:43780:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2147:18547:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:28797:25858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:22843:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2176:18038:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:12666:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:27511:8637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:2658:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:50422:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:36936:17170,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:41466:8903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:40115:8889,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:48593:15503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:19534:13709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:31685:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:50559:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:36936:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:43926:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:3128:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:40746:20968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:4341:26096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2411:18207:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2417:29242:3901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:10781:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:26718:10598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:28789:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:14082:17549,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:34565:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:6582:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2488:33813:29669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:12981:15054,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:21718:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:29817:21514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:7941:26278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:35156:24064,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1127:11468:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:4754:1785,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:6121:27890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:49192:2135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1170:37971:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:8160:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:15829:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:5094:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1195:39015:17885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:24170:13191,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1229:43521:15096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1246:44330:16245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1248:26492:27693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1261:47962:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:35439:12560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:28546:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:31993:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:6259:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:48407:2093,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:17916:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:19016:14942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:27924:20785,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:11153:11271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:28174:17605 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1102:31710:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2121:34760:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:14753:25241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:14769:25241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2343:6517:3046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:7488:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:17754:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:39662:15335 | YES_LDAS | 0.9338 | GT | 1.8256 | AG | 1.9219 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]" | chr1:65425378-chr1:65565546 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 276 | |||
| TCF7L2--AL158212.1 | 213 | 12 | 213.0 | 2.32 | ONLY_REF_SPLICE | TCF7L2^ENSG00000148737.17 | chr10:113040126:+ | AL158212.1^ENSG00000225292.2 | chr10:112905977:+ | 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GNLLT4_3@LH00166:237:23LGNLLT4:1:1475:24121:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1496:44427:25690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2102:4098:25844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2133:25205:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2137:28911:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:11048:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2196:1405:15152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2204:31912:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2210:32041:23602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2229:51530:21290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2230:35269:9211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2250:45891:10486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2267:28425:21206,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2268:15578:4783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:46077:27567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2281:8313:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2284:9041:6325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2286:40123:10360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2286:47097:27904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:18790:12056,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2326:47833:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:42445:9057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2332:14292:23602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:49993:21262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:28959:16189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2354:8718:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2357:8119:11902,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2359:45357:5638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2378:11323:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2405:28393:28941,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2411:2052:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:23175:17100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:35771:21486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2468:26362:27133,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2473:26111:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2481:20311:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2487:30407:27862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2493:51627:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:51231:25059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:30933:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:16889:5764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:28134:21262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1134:13766:14508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:45099:22537,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:31435:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:42227:17731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:3953:15419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:45058:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:46385:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:43505:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:50754:29641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:18515:14606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:17326:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:47687:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:34905:15222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:46458:17885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:48165:8455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:16703:22117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:37065:17647,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:51927:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:39290:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:5110:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:40657:22103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:37405:28268,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:28975:15657,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1343:23434:24330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:21128:28212,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:25440:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1356:1518:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:37712:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:10142:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:8540:20645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:43278:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1416:34379:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:25108:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:51676:22299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:10740:21990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:37559:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:28951:10851,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:51093:24036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1448:17439:27511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:13912:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:4123:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:7359:8707,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:22358:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:30512:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:45665:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2133:39654:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:33748:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:40657:11481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2147:43384:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2168:8030:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:29485:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:42809:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:46239:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:51425:23518,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2191:21840:2261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:42364:28030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2197:16379:25339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:40479:10052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:42833:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:51805:1252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2269:1202:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2269:35949:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2275:43739:11103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:4285:12574,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:25108:25522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2305:38651:6773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:35577:29697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:36871:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:42696:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:19963:27595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2334:15012:14704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2367:47882:18165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:38416:28842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2406:17479:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:1485:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:20821:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2415:25367:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:36928:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:38101:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:21832:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:3589:5792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:19834:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:51821:27203,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1106:46927:15559,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:45236:17226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1115:32454:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1124:27220:7179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:17536:28072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:21816:2247,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:50187:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:6380:26012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:34986:23181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:17301:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:33748:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1208:50325:10486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:5652:25451,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:37818:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:22786:10430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:13410:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1295:36005:16231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:42704:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1306:21686:15727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:5498:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:13014:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:3370:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:9575:9632 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1293:13030:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:26953:16498,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2245:21047:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:26103:7992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:48707:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2348:46919:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961 | YES_LDAS | 0.7284 | GT | 1.9219 | AG | 1.9899 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]" | chr10:113040126-chr10:112905977 | False | 1 | PASS | 225 | ||||||||||
| SPAG9--MBTD1 | 176 | 2 | 176.0 | 2.0 | ONLY_REF_SPLICE | SPAG9^ENSG00000008294.21 | chr17:51120354:- | MBTD1^ENSG00000011258.16 | chr17:51201696:- | 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LLT4_3@LH00166:237:23LGNLLT4:1:2326:5668:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2339:36297:28058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2353:20829:5078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2356:42469:27679,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2356:46951:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2364:40495:9211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2369:25893:14970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:4875:18165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2383:41709:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2402:10392:23350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2414:20141:10248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2415:5263:1406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2418:21880:6731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2419:12633:6941,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2420:24275:20519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2449:33886:14746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2454:15036:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2460:14632:29011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2477:34129:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2489:11946:17240,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2491:6485:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:27115:13331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:35253:21738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:1825:25325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1130:23709:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:31135:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:17051:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:48440:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:24065:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:48238:4405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:28530:10514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:34404:27357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:37478:13149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:25974:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:38530:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:29364:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:14721:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:44144:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1262:41013:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:23935:24835,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:46474:7039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:7051:3466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:31135:20547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:20998:17647,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:29622:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:52185:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:33942:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:20893:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1351:32664:18039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:8216:24373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1367:14745:25844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:12828:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:39913:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:43618:25886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:36305:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:11735:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:13086:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:36103:10206,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:37219:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:12229:2177,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:37098:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:22010:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2180:28652:4307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:36734:5554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:45673:28268,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23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| &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1150:7245:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:22066:27343 | YES_LDAS | 0.6022 | GT | 1.7819 | AG | 1.6402 | "[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[56557]""]" | chr17:51120354-chr17:51201696 | False | 1 | PASS | 178 | ||||||||||
| TCF7L2--AL158212.1 | 127 | 31 | 127.0 | 8.56 | ONLY_REF_SPLICE | TCF7L2^ENSG00000148737.17 | chr10:113089540:+ | AL158212.1^ENSG00000225292.2 | chr10:112888735:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:42526:17633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1108:32422:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1109:3759:15839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1111:43804:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:32915:11047,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1139:44751:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1162:10028:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1180:13742:4825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1185:22673:26853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1185:37114:20309,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1203:42178:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1205:2586:6885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1208:17237:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:49273:3704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1256:2036:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1258:51571:6255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1259:24218:29417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1263:41070:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1265:44929:26895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1275:41806:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1286:15627:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1287:28999:2752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1287:47145:17591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1288:32074:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1303:46433:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1313:19122:3774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1328:31621:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1335:49702:24821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1353:33740:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1360:50147:29739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1364:20578:14480,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1374:36200:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1378:24097:12784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1410:9381:9463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1431:42121:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:3759:11271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1472:36111:29585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1484:17309:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1493:10028:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:19437:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2112:2796:19833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2115:30755:17787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2117:5870:20253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2118:3249:22046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:42599:2289,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:36984:9071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2177:25197:25816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2178:30795:7852,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:9317:17086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2189:4487:29543,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2197:45641:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2228:16420:10416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2230:10562:20113,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:10918:22215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:2836:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2249:18806:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2255:10117:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2259:25707:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:17115:16217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2281:23094:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:29064:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2316:41482:10921,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:18094:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2347:25650:7852,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2404:5288:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2407:23725:2135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2419:46620:20015,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2447:27940:18235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2454:46967:20813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2467:42623:22537,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2495:23587:28268,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2497:14268:19720,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:4641:23588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:22026:13289,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:40382:17282,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1130:4681:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1135:18151:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1145:26467:15293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:25424:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1153:3532:7684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:21961:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:8119:26110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1239:50754:14536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1268:44257:12672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:23264:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:5975:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:15538:28142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:4244:4293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:40180:19258,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:29137:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:26783:1098,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:23409:4167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:46830:27273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:51749:20519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:37737:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:3734:6493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1486:26346:23350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:50535:2611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:44346:14844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2186:37907:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:35391:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2232:49912:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:35091:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:38125:12476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2269:51093:4727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2295:29355:17212,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2295:29501:2219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2344:15926:20547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:15797:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:9656:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:39694:26544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:38869:17352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:34719:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:34873:12392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:36928:1350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:42243:27735,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:3006:25578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:16638:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:40690:24597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:48262:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:51376:5218,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1259:47469:14816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:34938:10598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:43602:17815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:32559:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:48181:29697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:15999:15741 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1244:19219:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1293:13030:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:26953:16498,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1438:6566:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:42146:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:6614:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2245:21047:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:26103:7992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:48707:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:25019:10234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:15627:1589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2348:46919:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2402:11752:13849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2407:12553:5064,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:21856:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:9980:24653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:6962:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:26783:9197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:21185:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:42494:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:20173:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:10117:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1153:17981:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:37640:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:39039:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961 | YES_LDAS | 0.4587 | GT | 1.9086 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]" | chr10:113089540-chr10:112888735 | False | 1 | PASS | 158 | ||||||||||
| AC026191.1--SRGAP3 | 120 | 2 | 120.0 | 2.0 | ONLY_REF_SPLICE | AC026191.1^ENSG00000254485.5 | chr3:9326010:- | SRGAP3^ENSG00000196220.16 | chr3:9124917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1102:18110:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1120:10562:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1127:6072:3704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1129:12787:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1136:34242:23910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1139:43481:4573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1160:10918:17170,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1164:29040:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1171:23336:12756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1186:38756:24779,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:5862:3536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1201:30901:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1220:28514:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1230:2909:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1236:30391:29207,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:26848:9365,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1260:30197:17492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1272:44540:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:39508:28212,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1304:12852:4293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:19364:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1315:22794:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1320:1493:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1339:24081:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1341:30173:14256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1349:51757:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1353:24954:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1359:11711:20785,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1370:5506:22537,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:45633:13261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:30561:21290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1414:18830:8623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1415:10959:17184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1418:39177:22341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1418:45066:8356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1427:36661:6661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1437:23442:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1451:8742:12336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1451:9155:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:42251:9225,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1468:51724:26867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1487:2400:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2135:5579:10080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2139:29622:20225,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2148:12585:8118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2149:19639:26558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:50389:25984,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2175:13103:27287,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:23134:17535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:38263:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:25052:11327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:36038:15335,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2259:17156:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:3880:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:32389:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2352:32203:22060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2357:13661:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2370:28134:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2410:29639:8483,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2432:47671:5330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2495:22568:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:2804:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:31564:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:15724:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:3330:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:43634:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:47259:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:49119:24849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:9147:18698,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:8054:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:2440:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:39023:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46361:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:11517:29669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:51660:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:15845:19538,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:14001:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:12205:5134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:10368:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:14729:27777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:44702:4475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:4802:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:51166:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:49249:25550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:19421:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:24372:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:39751:13135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:42332:6983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:28587:10024,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:39727:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2186:51247:24947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:24283:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16525:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:45576:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:15327:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:41588:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:50131:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:37648:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:40212:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:3063:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:10312:1659,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:18248:27315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:37575:21696,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:49257:24807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:14146:13989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2496:27131:2457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1115:37526:1827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1135:39444:12546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:51490:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1170:45066:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:26144:8987,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1191:29841:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:18814:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:13248:12378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:26710:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:47695:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:33028:19370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:25553:2667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:35277:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1335:26039:25171 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1143:22835:4741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1466:34711:7348 | YES_LDAS | 0.4128 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]" | chr3:9326010-chr3:9124917 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 122 | |||
| ABLIM3--PTPRB | 101 | 0 | 101.0 | 0.0 | INCL_NON_REF_SPLICE | ABLIM3^ENSG00000173210.20 | chr5:149251419:+ | PTPRB^ENSG00000127329.16 | chr12:70558894:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1115:10506:21528,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1124:21573:12476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1125:37801:23238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1127:28271:24246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1145:13604:4475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1145:40811:28338,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1152:39662:4573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1168:46361:8469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1170:36952:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1174:29234:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:35698:16063,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:44799:20673,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1213:4956:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1219:5741:24569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1225:7998:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1239:5134:18193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1278:18855:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1281:12366:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1288:8734:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1312:7537:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1340:49483:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1349:31855:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1357:33781:17815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1380:39662:3760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:50438:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:50454:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1392:47744:1673,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1413:49459:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1418:33506:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1423:46490:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1430:48254:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1458:4268:11958,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:2019:5680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1467:29582:2079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1474:7092:13177,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2127:33587:9968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2142:35714:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:1493:6114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2153:7893:5792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2169:2116:8398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:31515:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:14688:12770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2210:29622:23195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2222:40034:28394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2270:47590:29039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2334:8888:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2342:30609:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2361:51490:20323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2368:36491:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2395:31766:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2402:5474:27974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2407:22738:23153,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:39783:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2457:6097:24485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:1138:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:17593:8609,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2459:19664:16792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2459:25642:13835,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:8920:5078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:10441:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:32405:6213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:11889:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:35261:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:5975:8805,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11104:16259,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:49103:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:44524:13947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:14607:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:51530:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:43594:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:4568:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:47097:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:28870:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:7860:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1371:28894:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:20465:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46822:10472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:29719:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:34549:13317,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:44136:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:7763:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:4875:3704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:25917:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:11557:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:39686:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:50147:11523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2366:52048:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:43262:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:12504:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:19510:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:47566:18712,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:50414:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:2634:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:47412:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:12180:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:18936:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:37073:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:51328:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:14073:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:36742:23756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:43739:21220 | . | NO_LDAS | 0.3417 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr12]""]" | chr5:149251419-chr12:70558894 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 101 | |||
| GDPD5--MAP6 | 85 | 6 | 85.0 | 6.0 | ONLY_REF_SPLICE | GDPD5^ENSG00000158555.15 | chr11:75477619:- | MAP6^ENSG00000171533.12 | chr11:75608322:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1108:2335:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1114:2942:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1176:49605:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1181:3815:22775,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1184:50236:24793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1190:19405:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:30893:20519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:20270:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:44508:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1250:25788:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1265:42518:28436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1296:33619:8539,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1310:37931:6535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1335:9430:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1344:20659:22103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1371:27899:6199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1386:37340:20757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1388:1162:20449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1395:50438:2976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:40034:2331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:4090:13751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1415:38198:8118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1423:48246:22943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:21864:6983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2149:25950:12546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2156:24801:3354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2157:1760:11621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:13022:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:6687:5778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:15732:13653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2210:51401:19861,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:42526:27161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:13184:24653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2240:10708:20421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:12197:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2270:31216:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2278:22277:20309,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:51805:1532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2349:5482:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2366:31418:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2371:14041:24793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2391:1453:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2411:51660:6353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2435:3128:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2446:45495:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2495:17099:6185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:28263:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:2173:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:37996:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:32648:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:30545:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:13329:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:14106:21542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:46725:7278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:28627:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:48246:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:1291:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:13240:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:44354:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1484:19704:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:20287:8174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:38902:11131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:26516:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:26119:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:15635:7628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:26548:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:41968:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:6809:13359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:19114:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:37834:29263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:46037:18501,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:49313:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:25197:14718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:39686:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:1049:20281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:2141:17773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:40002:29431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1220:42704:14214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:1574:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:24404:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:31386:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:4042:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:23838:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35391:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:51732:16343 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1238:35188:12770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2310:20367:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2332:14090:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:46336:28128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:29218:21654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:20643:1869 | YES_LDAS | 0.3079 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[60977]""]" | chr11:75477619-chr11:75608322 | False | 1 | PASS | 91 | ||||||||||
| MMP24OS--IGH@-ext | 68 | 0 | 65.81 | 0.0 | INCL_NON_REF_SPLICE | MMP24OS^ENSG00000126005.17 | chr20:35277774:- | IGH@-ext^IGH.g@-ext | chr14:105605894:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1109:24995:11649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1115:5571:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1175:9001:22985,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1209:38125:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1230:47752:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1236:35577:24204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1251:27357:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1286:47582:9491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1304:44686:13975,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:23668:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1331:46781:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1349:23037:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1354:12714:19889,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1387:9171:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1413:22083:12826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1422:3662:6731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1436:35027:28548,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1442:38085:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2123:19000:4405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:13313:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2136:2327:15517,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2159:47331:6787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2174:40293:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2204:30367:4195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2221:2448:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2221:28045:15222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2234:10781:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2249:41717:26488,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:41838:10248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2267:24501:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2304:14713:14494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:3573:16189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2321:3322:28002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2325:29307:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2391:29323:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2394:5975:26264,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2416:24283:5064,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2439:7917:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2450:29631:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45956:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:13143:2359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:23312:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:49985:8469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:33384:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:44508:17002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:28587:25493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46992:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:21387:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:34015:6591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:27794:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:28805:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:13758:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:50883:15293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:7156:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:50252:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:49661:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:33530:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:43011:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:22819:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:32114:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:26249:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:23231:18599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:50398:20309,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:11468:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:43715:19636,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:47202:21052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42607:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1316:3492:24737 | . | NO_LDAS | 0.2227 | AG | 1.2419 | CC | 1.5058 | "[""INTERCHROMOSOMAL[chr20--chr14]""]" | chr20:35277774-chr14:105605894 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 68 | ||||||
| SLC22A11--RNH1 | 63 | 0 | 62.12 | 0.0 | INCL_NON_REF_SPLICE | SLC22A11^ENSG00000168065.16 | chr11:64556383:+ | RNH1^ENSG00000023191.17 | chr11:502144:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1120:23086:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:4770:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1249:24841:21052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1334:42599:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1342:42850:23350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1361:47671:12140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1362:44484:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1379:33384:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1384:18766:11481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1388:15441:25928,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1394:21791:19833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1413:15724:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1426:15489:5330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1455:10643:24008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:5037:25255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2115:16897:29347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2115:42817:28086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:14203:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2164:3209:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2173:22859:22719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2180:43877:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:23369:3844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2201:28813:8118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:9915:17899,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2224:46757:13359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2225:5716:10206,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2265:3694:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2270:4988:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2285:16687:9590,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2301:36103:15054,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2307:43820:4741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2359:50292:1462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2360:31580:5036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2363:15772:12042,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2375:19558:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:6525:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2466:44354:17857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:38416:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:40552:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:1582:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:26411:10150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:47566:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:39832:8202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:50195:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1351:8289:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1357:16177:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:12051:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:49322:13485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2104:8726:13961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:41620:24639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:25003:7544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:36839:4503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:8499:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2316:30472:3873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2326:39282:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:31386:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:8313:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:4786:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:11719:15194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:27487:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:4495:22607,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:39864:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:48593:8917 | . | NO_LDAS | 0.2102 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:64.05Mb]""]" | chr11:64556383-chr11:502144 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 63 | ||||||
| CHCHD10--AC005064.1 | 46 | 0 | 46.0 | 0.0 | INCL_NON_REF_SPLICE | CHCHD10^ENSG00000250479.9 | chr22:23767834:- | AC005064.1^ENSG00000234715.2 | chr7:103446122:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1133:40237:25129,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1240:50697:29459,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1261:20262:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1343:25197:15559,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1368:51846:24947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1394:26904:4839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:42841:16077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1403:27640:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:9454:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1471:3314:26895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1477:35164:7348,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1487:42121:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1491:1348:6647,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2136:14276:3536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2172:7156:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2224:33441:16666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2277:15853:19216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2337:49192:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2392:41102:27974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2396:19380:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2409:16517:4811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2494:7383:3088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:32737:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:10603:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:8338:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:20497:7642,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43230:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:30189:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:8880:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:28037:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:20966:13751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:6558:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:25238:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:49038:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:16306:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:27559:28562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:27325:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:47801:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:36297:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:6008:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:13960:4587,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:21508:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:39678:20183,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1227:9211:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:24857:9449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:8362:11117 | . | NO_LDAS | 0.1556 | GT | 1.6402 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr22--chr7]""]" | chr22:23767834-chr7:103446122 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 46 | |||
| SEPTIN7P14--PSPH | 39 | 0 | 34.98 | 0.0 | ONLY_REF_SPLICE | SEPTIN7P14^ENSG00000245958.6 | chr4:119455133:+ | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1175:30690:3018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1196:22228:17338,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1213:45730:21108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1242:48343:4783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1278:7496:6591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:40220:20869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1310:26564:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:33368:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1444:43634:28800,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:15085:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2128:8750:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:30431:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2147:4276:2303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:3799:16161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2176:10757:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:8847:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2497:4632:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:40059:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:6331:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:11517:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:37478:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:11185:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:9713:3957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2423:34800:17731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:8427:14312 | . | YES_LDAS | 0.1183 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:119455133-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 39 | |||||||
| AKAP12--MT-RNR1 | 39 | 0 | 39.0 | 0.0 | INCL_NON_REF_SPLICE | AKAP12^ENSG00000131016.17 | chr6:151351470:+ | MT-RNR1^ENSG00000211459.2 | chrM:1419:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1107:10053:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1172:42146:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1185:38335:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:39848:22691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1239:34274:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1253:12569:1448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1277:7108:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1304:50859:25087,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1370:35107:14003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1387:22074:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:45204:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:46943:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1471:12253:2275,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2206:34946:14648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2260:33700:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2277:11404:4083,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2336:3548:8553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2462:48869:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:46142:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:31426:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:9211:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:30245:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:33619:16834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:22115:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:38530:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:24057:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:5474:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2215:11032:13583,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2239:26872:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:44168:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:17787:3452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:11727:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:38036:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:41151:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:12035:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:1688:20127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1204:37219:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:7868:15419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:46215:27189 | . | YES_LDAS | 0.1319 | GT | 1.6402 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chrM]""]" | chr6:151351470-chrM:1419 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 39 | |||||
| BPTF--DCXR | 38 | 0 | 37.94 | 0.0 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | DCXR^ENSG00000169738.8 | chr17:82037080:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:17229:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1176:23506:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1203:23159:7684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1257:30351:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1347:30933:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1355:23450:1266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1364:2472:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1473:8977:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:17722:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:18183:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2220:12892:6717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2292:35593:21906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:2715:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:15149:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2372:22018:10809,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2383:30998:25269,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2420:51441:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2433:23474:9688,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120 | . | NO_LDAS | 0.1284 | GT | 1.5628 | AG | 1.6049 | "[""INTRACHROMOSOMAL[chr17:14.05Mb]""]" | chr17:67945620-chr17:82037080 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 38 | ||||||
| BPTF--BSND | 37 | 0 | 0.06 | 0.0 | INCL_NON_REF_SPLICE | BPTF^ENSG00000171634.18 | chr17:67945620:+ | BSND^ENSG00000162399.9 | chr1:55006997:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:17229:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1176:23506:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1203:23159:7684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1257:30351:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1347:30933:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1364:2472:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1473:8977:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:17722:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:18183:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2220:12892:6717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2292:35593:21906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:2715:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:15149:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2372:22018:10809,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2383:30998:25269,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2420:51441:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2433:23474:9688,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120 | . | NO_LDAS | 0.0002 | GT | 1.5628 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:67945620-chr1:55006997 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 37 | ||||||
| RPL17--RPL17P12 | 36 | 0 | 36.0 | 0.0 | INCL_NON_REF_SPLICE | RPL17^ENSG00000265681.7 | chr18:49491405:- | RPL17P12^ENSG00000230559.1 | chr2:146194373:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1109:11485:9295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1136:42858:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1165:33910:24849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1205:48909:11341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1241:45002:12672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1267:1712:27371,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1307:48205:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1342:30860:3676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1438:34218:13779,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:34476:28240,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:30973:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2205:24429:7922,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2237:44985:21948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2253:37672:22481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:33781:8370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2472:38877:3298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:3815:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:20020:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:16848:4433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:25254:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:32656:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:38174:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:33853:17492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:31532:26222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:8087:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:4042:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:30852:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:21799:26152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2235:19890:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:37850:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:12318:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:49152:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:19316:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:51190:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:7076:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:18296:23280 | . | NO_LDAS | 0.1218 | GT | 1.9219 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]" | chr18:49491405-chr2:146194373 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 36 | |||
| ACTR5--RN7SKP231 | 32 | 0 | 32.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR5^ENSG00000101442.10 | chr20:38756039:+ | RN7SKP231^ENSG00000200151.1 | chr8:91595092:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:2068:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1143:27600:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1213:42817:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1216:5142:22887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1227:20343:5134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1253:49653:22915,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1280:23603:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1358:2456:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1444:46830:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1456:6372:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:31257:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2282:2739:21248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2311:6186:14718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:41887:5232,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2416:15174:27511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2433:26289:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2452:43319:11103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:50211:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:29169:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:28045:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:23061:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:49524:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1438:49669:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:4956:20463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:10190:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2193:37114:14508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:32284:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:47825:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:37915:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:3492:20841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:22212:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:38764:2233 | . | YES_LDAS | 0.1083 | GT | 1.5656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr8]""]" | chr20:38756039-chr8:91595092 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 32 | |||||
| UMAD1--GLCCI1 | 28 | 0 | 28.0 | 0.0 | ONLY_REF_SPLICE | UMAD1^ENSG00000219545.11 | chr7:7801743:+ | GLCCI1^ENSG00000106415.13 | chr7:8003908:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1120:19931:23167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1198:4713:12840,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1326:6299:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1337:4616:15727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1390:49815:25606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1391:40698:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2104:45762:27525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2117:46757:16385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:51433:25858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:12148:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2221:7715:11369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:9600:17184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2402:11849:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33991:4979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:19704:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:23086:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:33748:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:6558:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:20384:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2160:30351:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:37866:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:50737:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:25294:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:35423:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:11331:12224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:33036:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:37227:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:24016:27806 | . | YES_LDAS | 0.0947 | GT | 1.9656 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]" | chr7:7801743-chr7:8003908 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 28 | |||
| NPM1--MT-RNR2 | 28 | 0 | 14.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1^ENSG00000181163.14 | chr5:171391799:+ | MT-RNR2^ENSG00000210082.2 | chrM:1959:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1126:47000:2709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1156:16840:23083,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1182:42510:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1201:18353:23602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1246:6817:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:29970:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1270:46336:4195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:39808:2864,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1358:22350:26965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:22430:13289,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:24065:21332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2128:47056:29319,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2246:1316:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2319:41345:21052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2408:22439:3746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:1089:19762,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1246:30658:9856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:47582:23868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:45859:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44451:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:19033:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:2480:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:21452:22159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:25100:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:48869:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:24736:4027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:34970:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:43432:12140 | . | NO_LDAS | 0.0474 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chrM]""]" | chr5:171391799-chrM:1959 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 28 | |||||||
| FBXO25--SEPTIN14 | 28 | 0 | 28.0 | 0.0 | ONLY_REF_SPLICE | FBXO25^ENSG00000147364.17 | chr8:435707:+ | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1101:25173:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1108:19575:5596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1173:41207:23364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1330:13701:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2102:42227:16946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2106:21136:4013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:26548:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2147:19162:6086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2230:27883:28842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:30917:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2270:5150:7544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2348:25189:25297,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2439:20845:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:11986:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:21969:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1353:50478:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:26079:11425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:5676:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:16444:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:17115:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:30464:13219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:19591:1504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:39889:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:9066:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:16266:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:26484:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:2286:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:3184:14228 | . | YES_LDAS | 0.0947 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:435707-chr7:55796092 | True | aih_curated_blacklist | score(6) | 0 | aih_curated_blacklist | score(6) | FAIL | 28 | ||||||
| SEPTIN14--AP006222.1 | 24 | 0 | 24.0 | 0.0 | INCL_NON_REF_SPLICE | SEPTIN14^ENSG00000154997.9 | chr7:55795924:- | AP006222.1^ENSG00000228463.10 | chr1:289370:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1208:29242:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1264:23482:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1329:50681:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1391:36693:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1415:33109:11888,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:41749:18950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:50689:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:31524:17773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:17107:23574,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2424:33781:17422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:28619:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:14810:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:44451:6535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:27915:6227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:33764:11761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:1720:12000,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:22875:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:19243:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:40204:3130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:10902:7978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:10481:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:8435:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:48254:1434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:23862:6857 | . | YES_LDAS | 0.0812 | GT | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:55795924-chr1:289370 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 24 | ||||||
| LDLRAD3--PRR5L | 24 | 1 | 24.0 | 1.0 | INCL_NON_REF_SPLICE | LDLRAD3^ENSG00000179241.13 | chr11:36098461:+ | PRR5L^ENSG00000135362.14 | chr11:36296290:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:30520:15391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1146:50632:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1264:31952:5568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1282:27438:16217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1303:47736:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1323:49556:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1374:27268:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1495:51296:26264,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1498:34120:17422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2119:12318:6227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2132:25262:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2157:4883:13275,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2194:28975:12350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2375:25100:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2377:3354:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2401:2715:11509,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:10336:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:43820:15391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:8160:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:24979:3354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:47857:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:21953:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:14308:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1101:12116:1673 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11841:16245 | YES_LDAS | 0.0846 | GT | 1.9329 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[64152]""]" | chr11:36098461-chr11:36296290 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 25 | |||
| RN7SL702P--RN7SL4P | 23 | 0 | 21.8 | 0.0 | INCL_NON_REF_SPLICE | RN7SL702P^ENSG00000243980.3 | chrY:12273695:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:41021:13905,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1253:25804:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1278:6865:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:43303:2639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1414:28409:17338,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1452:43691:9786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2141:23927:23364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:15044:18627,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2273:6008:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2447:20537:19622,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15667:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:2497:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2275:26556:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51740:10697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:31710:20421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:6178:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:42081:28576 | . | YES_LDAS | 0.0738 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrY--chr3]""]" | chrY:12273695-chr3:15738565 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 23 | ||||||
| NUPR2--PSPH | 21 | 0 | 7.86 | 0.0 | ONLY_REF_SPLICE | NUPR2^ENSG00000185290.4 | chr7:56116015:- | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1196:22228:17338,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1213:45730:21108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1242:48343:4783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1310:26564:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2133:48812:20841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:3799:16161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:16072:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2497:4632:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:41507:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1334:30221:7530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:10910:15643,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075 | . | YES_LDAS | 0.0266 | GT | 1.8892 | AG | 1.9656 | "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[63077]""]" | chr7:56116015-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 21 | |||||||
| PALLD--PPM1D | 20 | 1 | 20.0 | 1.0 | ONLY_REF_SPLICE | PALLD^ENSG00000129116.19 | chr4:168711923:+ | PPM1D^ENSG00000170836.12 | chr17:60656599:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1232:32689:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2248:19745:14718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2282:48165:28464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2306:22074:2920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:48383:2163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2409:3111:15082,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:6008:23854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:19680:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:40107:24485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36701:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:11824:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:39889:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:49847:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:49961:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:3322:22453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:32098:14788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:11177:10837,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:21290:1841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:26225:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1319:46191:17815 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2238:37267:10907 | YES_LDAS | 0.0711 | GT | 1.6895 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:168711923-chr17:60656599 | False | 1 | PASS | 21 | ||||||||||
| AGAP5--AC022400.4 | 20 | 1 | 19.67 | 1.0 | INCL_NON_REF_SPLICE | AGAP5^ENSG00000172650.14 | chr10:73692043:- | AC022400.4^ENSG00000272140.2 | chr10:73713332:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1176:40334:8735,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1204:30909:2639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:50430:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1268:45988:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1297:24979:1925,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1417:45285:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:26581:19917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1445:10498:8286,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:13564:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2128:3904:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2160:33821:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2184:25416:3158,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:46563:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:32899:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:24437:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2136:46992:7123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:48343:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:24259:16960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:49589:3887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:20691:11789 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1381:22358:4223 | YES_LDAS | 0.0699 | GT | 1.7465 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]" | chr10:73692043-chr10:73713332 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 21 | |||
| MIR4713HG--GLDN | 20 | 2 | 20.0 | 1.66 | ONLY_REF_SPLICE | MIR4713HG^ENSG00000259240.1 | chr15:51037681:+ | GLDN^ENSG00000186417.14 | chr15:51377449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1107:23070:1140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1135:18555:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:22350:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:23070:4447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2123:35480:25353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2129:32381:29487,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2395:36208:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:25893:28142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:25990:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2206:10530:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:25448:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:47671:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:32405:25718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2373:33441:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:49030:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:18393:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:21702:25760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:46134:14578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1263:48132:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:16614:23223 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2290:20505:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586 | YES_LDAS | 0.0733 | GT | 1.9656 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]" | chr15:51037681-chr15:51377449 | False | 1 | PASS | 22 | ||||||||||
| RBBP4--C1QBP | 19 | 0 | 9.5 | 0.0 | ONLY_REF_SPLICE | RBBP4^ENSG00000162521.19 | chr1:32662337:+ | C1QBP^ENSG00000108561.8 | chr17:5434966:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1102:2189:7572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1202:50859:26572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:21759:5960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2142:26872:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:28741:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:21953:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2323:3888:2639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2349:43545:9646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2394:10012:7306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918 | . | YES_LDAS | 0.0321 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:32662337-chr17:5434966 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 19 | |||||||
| ARHGAP29-AS1--NME2 | 19 | 0 | 19.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP29-AS1^ENSG00000226835.3 | chr1:94249519:+ | NME2^ENSG00000243678.12 | chr17:51169937:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2115:37332:9786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2175:32802:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2180:38198:26558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2188:2950:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2450:25828:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2457:8046:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:49136:5820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:50576:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:47574:10234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:38586:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:3209:5022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:14996:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:50033:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:36968:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:37494:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:2027:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:5927:18277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:40997:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1250:13709:10290 | . | YES_LDAS | 0.0643 | GT | 1.8295 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:94249519-chr17:51169937 | False | 1 | PASS | 19 | ||||||||||
| AC015712.1--C1QBP | 19 | 0 | 9.5 | 0.0 | ONLY_REF_SPLICE | AC015712.1^ENSG00000232386.9 | chr15:100855348:+ | C1QBP^ENSG00000108561.8 | chr17:5434966:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1102:2189:7572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1202:50859:26572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:21759:5960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2142:26872:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:28741:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2308:21953:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2323:3888:2639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2349:43545:9646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2394:10012:7306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918 | . | YES_LDAS | 0.0321 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:100855348-chr17:5434966 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 19 | |||||||
| IGH@-ext--CREB3L2 | 18 | 0 | 18.0 | 0.0 | INCL_NON_REF_SPLICE | IGH@-ext^IGH.g@-ext | chr14:105760805:- | CREB3L2^ENSG00000182158.15 | chr7:137928171:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1113:41191:18768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1231:30812:7880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1377:27317:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1411:44160:3929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2153:31693:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2187:15700:29067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2306:40431:20533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2366:45988:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2492:4147:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:49241:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:29218:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:33214:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:18660:26544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:48060:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:25456:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:47752:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:2853:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1303:41223:4671 | . | NO_LDAS | 0.0609 | CC | 1.4566 | CC | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr7]""]" | chr14:105760805-chr7:137928171 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 18 | ||||||
| GOLGA6L17P--GOLGA2P6 | 18 | 0 | 6.87 | 0.0 | INCL_NON_REF_SPLICE | GOLGA6L17P^ENSG00000277741.4 | chr15:82521523:+ | GOLGA2P6^ENSG00000241621.1 | chr10:30370881:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2258:32430:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2269:17140:2359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:28692:17156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2281:5110:4811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:6161:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1343:22317:11663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:7326:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:11655:19482,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:14680:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:40164:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1450:15886:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2118:48658:25536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:47526:24499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:5247:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:28830:5204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:18256:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1247:49500:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:4398:20617 | . | YES_LDAS | 0.0232 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:82521523-chr10:30370881 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 18 | |||||||
| CHSY1--AC090907.2 | 18 | 0 | 18.0 | 0.0 | ONLY_REF_SPLICE | CHSY1^ENSG00000131873.7 | chr15:101235082:- | AC090907.2^ENSG00000259755.1 | chr15:101050779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1179:7682:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1207:46822:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1310:4026:3971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1314:41636:6619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2341:34800:27848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2347:42121:16512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2365:11873:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2389:21492:4685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2478:29404:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:31871:29025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:42825:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:36208:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1445:22835:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:12342:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:33311:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:27082:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:39533:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:40139:13387 | . | YES_LDAS | 0.0609 | GT | 1.8323 | AG | 1.6402 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:0.09Mb]"",""NEIGHBORS[89661]""]" | chr15:101235082-chr15:101050779 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 18 | |||
| AC008740.1--CRYM-AS1 | 18 | 0 | 18.0 | 0.0 | INCL_NON_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21338921:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:37413:5974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:4972:1855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1416:23790:1687,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:18604:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1487:52096:10725,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2189:41677:5540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2445:5466:4083,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:9187:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:36847:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:24882:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:25998:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2180:34315:11397,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:38424:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:22277:22523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:10150:13933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:24000:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:10247:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1297:44176:2752 | . | YES_LDAS | 0.0609 | GT | 1.7232 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21338921 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 18 | |||
| BOLA2B--SMG1P2 | 18 | 1 | 17.64 | 0.6 | INCL_NON_REF_SPLICE | BOLA2B^ENSG00000169627.9 | chr16:30193358:- | SMG1P2^ENSG00000205534.6 | chr16:29548658:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1154:36475:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1290:7302:9870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1307:34064:10458,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1325:37915:1294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1375:14567:5386,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:19445:6773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:37178:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2205:8823:4461,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2295:17908:8455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2457:5344:11103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:7359:28912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:6687:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:36232:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:4770:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:7917:26432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14219:22131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:8208:6143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:2667:15853 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493 | YES_LDAS | 0.0617 | GT | 1.9329 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]" | chr16:30193358-chr16:29548658 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 19 | |||||||
| HLA-C--MUC16 | 17 | 0 | 17.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269489:- | MUC16^ENSG00000181143.15 | chr19:8848985:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1142:29242:17296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:25836:20617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:9551:3004,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1326:15789:20505,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1349:48318:20715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1369:34768:18768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1444:32470:9295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1458:21395:1967,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2362:40139:25914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2415:47542:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:36159:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:34970:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1417:7456:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:9729:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2201:49718:3382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:31354:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:3920:24190 | . | NO_LDAS | 0.0575 | GT | 1.9656 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:31269489-chr19:8848985 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 17 | ||||||
| AC211476.4--CCDC146 | 16 | 0 | 3.2 | 0.0 | ONLY_REF_SPLICE | AC211476.4^ENSG00000277125.1 | chr7:73069531:+ | CCDC146^ENSG00000135205.15 | chr7:77236947:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:34007:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1236:31071:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2113:38983:28955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:38497:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:43780:25774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:30229:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:29226:24695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:51951:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:50697:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:36903:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:43861:25381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:20748:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:19890:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:5587:22621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:4333:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:39565:24471 | . | YES_LDAS | 0.0108 | GT | 1.4566 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr7:4.05Mb]""]" | chr7:73069531-chr7:77236947 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 16 | ||||||
| RBM14--RBM4 | 15 | 0 | 14.73 | 0.0 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | RBM4^ENSG00000173933.21 | chr11:66639700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1309:41507:1182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2171:12286:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:50689:8202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2330:49475:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2415:47016:28997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2417:27835:11271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:40503:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:15505:1406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:49467:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:26653:10514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:51579:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:17496:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:7100:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:14980:24457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:2756:22060 | . | YES_LDAS | 0.0498 | GT | 1.7465 | AG | 1.9086 | "[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]" | chr11:66617057-chr11:66639700 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 15 | |||||||
| HLA-L--HLA-V | 15 | 0 | 15.0 | 0.0 | ONLY_REF_SPLICE | HLA-L^ENSG00000243753.5 | chr6:30259697:+ | HLA-V^ENSG00000181126.13 | chr6:29792437:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1110:37818:3901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:6962:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1457:26128:6157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:31176:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2141:37373:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2195:11485:4783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2266:26540:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:16387:19889,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2330:51328:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:39581:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:39872:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:3597:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1486:47186:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2170:41232:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:3920:7263 | . | YES_LDAS | 0.0507 | GT | 1.7056 | AG | 1.8323 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.46Mb]""]" | chr6:30259697-chr6:29792437 | True | "pair|MHC | complexes|HLA-V | HLA-L; | pair|recurrent | breakpoints" | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 15 |
| CPSF6--GRM8 | 15 | 0 | 15.0 | 0.0 | INCL_NON_REF_SPLICE | CPSF6^ENSG00000111605.18 | chr12:69262562:+ | GRM8^ENSG00000179603.18 | chr7:126445313:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1274:40900:7894,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1292:3314:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1353:27438:20029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:48165:13919,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1435:40625:5176,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1448:25100:4965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:18628:29095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2296:47420:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2331:35051:27890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1131:42866:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:30771:20645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:31273:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:46361:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:40439:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6234:16680 | . | NO_LDAS | 0.0507 | GT | 1.9899 | AG | 1.8256 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:69262562-chr7:126445313 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 15 | ||||||
| CHST11--MME | 15 | 0 | 15.0 | 0.0 | INCL_NON_REF_SPLICE | CHST11^ENSG00000171310.11 | chr12:104601991:+ | MME^ENSG00000196549.13 | chr3:155183570:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:9041:19889,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1263:45956:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:12836:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:17819:17745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2303:22293:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2367:43545:6507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2404:44977:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:7140:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:36418:24541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:2173:23966,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1498:41110:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1124:25666:4994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:45123:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:38319:26657,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:42939:22271 | . | NO_LDAS | 0.0507 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:104601991-chr3:155183570 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 15 | ||||||
| BUB3--LINC02641 | 15 | 1 | 15.0 | 1.0 | ONLY_REF_SPLICE | BUB3^ENSG00000154473.18 | chr10:123162828:+ | LINC02641^ENSG00000230131.6 | chr10:123361319:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1147:29792:22032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1211:7334:19734,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1419:49524:28772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2212:48958:21514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:46069:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2454:40228:12644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2484:25003:28170,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:8459:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:7440:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:41248:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:13839:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2115:15287:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:45002:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:4552:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:5708:12995 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:4964:25550 | YES_LDAS | 0.0541 | GT | 1.1589 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr10:0.19Mb]""]" | chr10:123162828-chr10:123361319 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 16 | |||
| ZBED3-AS1--PDE8B | 14 | 0 | 14.0 | 0.0 | ONLY_REF_SPLICE | ZBED3-AS1^ENSG00000250802.7 | chr5:77118521:+ | PDE8B^ENSG00000113231.14 | chr5:77311994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1259:45091:8398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1262:11905:26474,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:37009:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2184:12027:21360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2244:13216:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2312:50956:3620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2429:20618:27441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:39395:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:39775:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1394:2189:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:6623:1855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2384:14624:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:47242:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:45835:27876 | . | YES_LDAS | 0.0474 | GT | 1.9329 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]" | chr5:77118521-chr5:77311994 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 14 | |||
| HLA-A--C12orf40 | 14 | 0 | 14.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-A^ENSG00000206503.13 | chr6:29942951:+ | C12orf40^ENSG00000180116.15 | chr12:39716794:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2131:50818:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2250:46474:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2260:1081:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2473:48982:27077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:6170:27834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:30836:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:28555:5008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:39662:9169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1448:4026:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:43036:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1483:32438:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:44993:15124,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:47631:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:37300:17380 | . | NO_LDAS | 0.0474 | AT | 1.5656 | AC | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:29942951-chr12:39716794 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 14 | |||
| FUS--CTNNA1 | 14 | 0 | 14.0 | 0.0 | INCL_NON_REF_SPLICE | FUS^ENSG00000089280.19 | chr16:31184352:+ | CTNNA1^ENSG00000044115.21 | chr5:138934073:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1379:15643:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1429:41482:7025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1478:40398:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2122:49500:5442,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2146:7334:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:27608:2079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2169:45010:19104,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2419:49516:4405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2468:39347:7950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:16937:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:3031:5470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:17989:23195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:32171:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:15942:20491 | . | NO_LDAS | 0.0474 | GT | 1.8062 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:31184352-chr5:138934073 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 14 | |||||||
| ZNF625--AGRN | 13 | 0 | 13.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF625^ENSG00000257591.6 | chr19:12146098:- | AGRN^ENSG00000188157.15 | chr1:1051746:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1478:9041:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2120:17261:15405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2121:40746:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2393:6817:2191,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:32066:7446,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2102:3597:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:18984:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2205:35649:13065,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:41110:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:16598:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:39792:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:16233:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:5450:27455 | . | NO_LDAS | 0.044 | GT | 1.8892 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:12146098-chr1:1051746 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 13 | |||||||
| TLK2--AC240565.1 | 13 | 0 | 3.17 | 0.0 | ONLY_REF_SPLICE | TLK2^ENSG00000146872.18 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1156:49556:27707,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:43966:5582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1228:15303:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2101:14818:7278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2452:20448:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2497:7885:6255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:24372:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1341:49216:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:32616:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:5781:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:24526:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:26783:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:52056:22257 | . | YES_LDAS | 0.0107 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr17:62.34Mb]""]" | chr17:62560126-chr17:106864 | False | 1 | PASS | 13 | ||||||||||
| RGSL1--MYOF | 13 | 0 | 6.5 | 0.0 | ONLY_REF_SPLICE | RGSL1^ENSG00000121446.20 | chr1:182507266:+ | MYOF^ENSG00000138119.17 | chr10:93452141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:42947:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1127:37874:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1324:39605:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1467:49087:9239,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:25788:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:28789:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186 | . | NO_LDAS | 0.022 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:182507266-chr10:93452141 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 13 | |||||
| IGL@-ext--ZNF562 | 13 | 0 | 13.0 | 0.0 | INCL_NON_REF_SPLICE | IGL@-ext^IGL.g@-ext | chr22:22415614:+ | ZNF562^ENSG00000171466.10 | chr19:9660874:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1167:26225:14059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:1655:17352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:24469:17352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1249:1469:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1420:24736:5092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2142:35876:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2479:25925:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:44864:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:7262:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:12269:26881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2336:45956:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:14203:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:35043:27287 | . | NO_LDAS | 0.044 | AC | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:22415614-chr19:9660874 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 13 | |||||||
| DPY19L1P1--MYOF | 13 | 0 | 6.5 | 0.0 | ONLY_REF_SPLICE | DPY19L1P1^ENSG00000229358.3 | chr7:32581572:- | MYOF^ENSG00000138119.17 | chr10:93452141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:42947:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1127:37874:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1324:39605:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1467:49087:9239,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:25788:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:28789:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186 | . | NO_LDAS | 0.022 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:32581572-chr10:93452141 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 13 | |||||
| RPS3AP11--SEPTIN7 | 12 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | RPS3AP11^ENSG00000230116.1 | chr1:42491744:+ | SEPTIN7^ENSG00000122545.20 | chr7:35832798:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:24097:29067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:26694:27932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2320:7537:4279,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2445:22827:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:46830:10739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:3354:4069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:8216:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:21007:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:1623:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1130:14154:28156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:46086:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:15069:13205 | . | NO_LDAS | 0.0135 | GT | 1.9329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:42491744-chr7:35832798 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 12 | ||||||
| AC008740.1--CRYM-AS1 | 12 | 0 | 12.0 | 0.0 | ONLY_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21315884:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1224:12989:3214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1463:4705:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2368:24720:18543,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2406:47574:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:23134:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1680:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:49718:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:2327:8006,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2138:16266:25339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:13580:7151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:32438:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:14017:18529 | . | YES_LDAS | 0.0406 | GT | 1.7232 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21315884 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 12 | |||
| PLEC--NUTM2F | 11 | 0 | 2.2 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | NUTM2F^ENSG00000130950.14 | chr9:94325374:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1130:6129:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:32923:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:27632:4419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2305:10433:14592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2431:46709:9071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:14502:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713 | . | NO_LDAS | 0.0074 | GT | 1.7465 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr8--chr9]""]" | chr8:143925564-chr9:94325374 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 11 | |||||||
| PLEC--IMPDH2 | 11 | 0 | 2.2 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | IMPDH2^ENSG00000178035.13 | chr3:49027844:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1130:6129:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:32923:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:27632:4419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2305:10433:14592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2431:46709:9071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:14502:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713 | . | NO_LDAS | 0.0074 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:143925564-chr3:49027844 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 11 | |||||||
| PLEC--CRX | 11 | 0 | 2.2 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | CRX^ENSG00000105392.16 | chr19:47839401:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1130:6129:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:32923:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:27632:4419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2305:10433:14592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2431:46709:9071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:14502:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713 | . | NO_LDAS | 0.0074 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:143925564-chr19:47839401 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 11 | |||||||
| PLEC--AC109361.1 | 11 | 0 | 2.2 | 0.0 | INCL_NON_REF_SPLICE | PLEC^ENSG00000178209.16 | chr8:143925564:- | AC109361.1^ENSG00000249635.1 | chr4:106020963:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1130:6129:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:32923:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:27632:4419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2305:10433:14592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2431:46709:9071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:14502:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713 | . | NO_LDAS | 0.0074 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:143925564-chr4:106020963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 11 | |||||||
| PAXBP1--GOLGA8A | 11 | 0 | 11.0 | 0.0 | INCL_NON_REF_SPLICE | PAXBP1^ENSG00000159086.15 | chr21:32771321:- | GOLGA8A^ENSG00000175265.17 | chr15:34381856:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1264:38254:21080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1437:22794:17619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2259:49718:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:35633:3256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2323:12358:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2360:42170:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:49224:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:7076:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:40795:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:20359:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1246:22285:19538 | . | NO_LDAS | 0.0372 | GT | 1.2867 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr21--chr15]""]" | chr21:32771321-chr15:34381856 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 11 | |||||||
| EIF1AXP1--PDE4DIPP9 | 11 | 0 | 11.0 | 0.0 | INCL_NON_REF_SPLICE | EIF1AXP1^ENSG00000236698.1 | chr1:16686040:- | PDE4DIPP9^ENSG00000230239.1 | chr1:16859049:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1312:28336:2976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1327:8459:3887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1406:16088:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:5174:10781,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2312:42939:23644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2461:15489:28310,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:6299:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:13548:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:20885:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:47081:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:11849:4265 | . | YES_LDAS | 0.0372 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.17Mb]""]" | chr1:16686040-chr1:16859049 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 11 | |||||||
| CMTM8--CMTM7 | 11 | 0 | 11.0 | 0.0 | ONLY_REF_SPLICE | CMTM8^ENSG00000170293.9 | chr3:32239119:+ | CMTM7^ENSG00000153551.14 | chr3:32441840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2185:42405:1224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:42299:18922,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2290:1380:27749,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2301:5951:8847,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2385:46595:14031,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:20529:8062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:40325:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:14955:14550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:16816:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:21209:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35221:26839 | . | YES_LDAS | 0.0372 | GT | 1.9656 | AG | 1.9086 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]" | chr3:32239119-chr3:32441840 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 11 | |||
| PICALM--SYTL2 | 11 | 1 | 11.0 | 1.0 | ONLY_REF_SPLICE | PICALM^ENSG00000073921.18 | chr11:85974708:- | SYTL2^ENSG00000137501.17 | chr11:85758114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:29639:14087,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1323:15287:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1343:27964:26600,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2109:45260:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2305:12480:1266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2420:51053:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33417:12084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:9365:8342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:24647:5218,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:5069:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:19842:13793 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:7407:13583 | YES_LDAS | 0.0406 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:0.15Mb]""]" | chr11:85974708-chr11:85758114 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 12 | |||
| TVP23C--CDRT4 | 11 | 2 | 11.0 | 2.0 | INCL_NON_REF_SPLICE | TVP23C^ENSG00000175106.17 | chr17:15503098:- | CDRT4^ENSG00000239704.11 | chr17:15440285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1280:37462:18109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1293:44120:13415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1466:27204:1687,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2151:31564:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2281:47817:16484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2301:27648:9968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1398:8030:24919,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:47873:12042,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:6404:25465,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:16606:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:8993:23223 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2283:18167:7698,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:11412:25564 | YES_LDAS | 0.044 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]" | chr17:15503098-chr17:15440285 | False | 0 | Does | not | meet | inclusion | criteria | FAIL | 13 | |||||
| YAF2--RYBP | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | YAF2^ENSG00000015153.15 | chr12:42238155:- | RYBP^ENSG00000163602.11 | chr3:72446621:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1217:39549:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1317:40180:19622,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1342:30084:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2103:22811:4391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:35253:27539,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:25739:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2346:28797:7334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1467:39670:29221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:32867:8413,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:30658:9267 | . | YES_LDAS | 0.0338 | GT | 1.5656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:42238155-chr3:72446621 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| USP22--RHBDF2 | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | USP22^ENSG00000124422.12 | chr17:21002946:- | RHBDF2^ENSG00000129667.13 | chr17:76493111:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1272:29364:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1317:43812:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2151:29105:6100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2217:48407:26390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2225:12051:12350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:20327:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:4374:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:15141:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:41757:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:18127:4433 | . | NO_LDAS | 0.0338 | GT | 0.9056 | AG | 1.2366 | "[""INTRACHROMOSOMAL[chr17:55.43Mb]""]" | chr17:21002946-chr17:76493111 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 10 | |||||||
| TMED3--MINAR1 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | TMED3^ENSG00000166557.14 | chr15:79314005:+ | MINAR1^ENSG00000169330.9 | chr15:79456098:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:32470:25942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1453:12747:10052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2185:3540:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2196:15020:22761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2279:37170:28198,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2324:49233:2149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:11396:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:31426:20435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:23061:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:47930:26180 | . | YES_LDAS | 0.0338 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]" | chr15:79314005-chr15:79456098 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| SAMD5--SASH1 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | SASH1^ENSG00000111961.18 | chr6:148390134:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1155:19631:21528,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2234:22536:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2453:20853:27932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:34331:18291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:8815:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29024:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:21573:11215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:15578:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:2691:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1304:11582:1392 | . | YES_LDAS | 0.0338 | GT | 1.8295 | AG | 1.9219 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]" | chr6:147509387-chr6:148390134 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| PKNOX2--MEIS3 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | PKNOX2^ENSG00000165495.16 | chr11:125385722:+ | MEIS3^ENSG00000105419.18 | chr19:47417350:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1414:3128:3816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2178:40916:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2332:24971:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2346:18191:20743,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:44201:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1458:30973:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:15441:18193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:20909:20996,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:32171:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:5975:18277 | . | NO_LDAS | 0.0338 | GT | 1.9656 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:125385722-chr19:47417350 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| EIF3C--NPIPB13 | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | EIF3C^ENSG00000184110.15 | chr16:28735582:+ | NPIPB13^ENSG00000198064.13 | chr16:30245853:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:14405:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1354:31993:8328,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:43521:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2254:37276:12882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2284:32931:6451,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2366:20068:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37526:26909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:5983:28044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:32769:12504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2159:43044:17240 | . | YES_LDAS | 0.0338 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr16:1.49Mb]""]" | chr16:28735582-chr16:30245853 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 10 | |||||||
| CFAP74--ST7 | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP74^ENSG00000142609.18 | chr1:1922177:- | ST7^ENSG00000004866.22 | chr7:117119693:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1316:40309:20127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1427:6226:24288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:8839:6535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2311:27042:14606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2347:7601:9323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2479:16808:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1195:16832:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:17665:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:11396:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2245:38287:26769 | . | NO_LDAS | 0.0338 | AT | 1.8295 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:1922177-chr7:117119693 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 10 | |||||||
| ACTR3C--AC092681.1 | 10 | 0 | 10.0 | 0.0 | INCL_NON_REF_SPLICE | ACTR3C^ENSG00000106526.10 | chr7:150284753:- | AC092681.1^ENSG00000224016.2 | chr7:149909705:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1331:38910:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1373:40002:16007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:43990:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:5822:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:21241:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:27535:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2278:18466:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:21759:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:25319:6185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:32980:11411 | . | YES_LDAS | 0.0338 | GT | 1.9899 | AG | 1.9899 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]" | chr7:150284753-chr7:149909705 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| AC073529.1--MID1 | 10 | 0 | 10.0 | 0.0 | ONLY_REF_SPLICE | AC073529.1^ENSG00000234129.8 | chrX:11055936:- | MID1^ENSG00000101871.16 | chrX:10567603:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1135:3678:20239,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1432:41992:9225,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2287:10158:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2310:37729:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2346:46854:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:4131:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:48092:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:7828:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:49847:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:24445:6353 | . | YES_LDAS | 0.0338 | GT | 1.9219 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]" | chrX:11055936-chrX:10567603 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 10 | |||
| WDR27--AL135910.1 | 10 | 2 | 10.0 | 1.43 | ONLY_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL135910.1^ENSG00000272848.2 | chr6:169430712:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1234:24574:9800,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1402:47655:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1491:25836:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2197:41677:25634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:45236:14144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2449:15756:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:29372:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:10813:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:10926:8525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:2246:20169 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:51312:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011 | YES_LDAS | 0.0386 | GT | 1.6729 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" | chr6:169582836-chr6:169430712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 12 | |||
| YWHAE--CRK | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | YWHAE^ENSG00000108953.17 | chr17:1400047:- | CRK^ENSG00000167193.8 | chr17:1437155:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1147:24599:10851,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1220:26192:18207,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1249:46110:3270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1306:34072:28240,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:29914:7249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2320:3459:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2470:38999:18698,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:24396:17394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:33748:10052 | . | YES_LDAS | 0.0304 | GT | 1.9329 | AG | 1.8323 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20467]""]" | chr17:1400047-chr17:1437155 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| RN7SL732P--RN7SL128P | 9 | 0 | 5.8 | 0.0 | INCL_NON_REF_SPLICE | RN7SL732P^ENSG00000264618.2 | chrX:39786593:- | RN7SL128P^ENSG00000240869.3 | chr6:20421837:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1319:23935:16988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:28830:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:15044:18627,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:18248:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:51595:14087,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:30075:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635 | . | YES_LDAS | 0.0196 | GT | 1.8892 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:39786593-chr6:20421837 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 9 | ||||||
| RIMKLA--CAMSAP1 | 9 | 0 | 9.0 | 0.0 | INCL_NON_REF_SPLICE | RIMKLA^ENSG00000177181.15 | chr1:42419655:+ | CAMSAP1^ENSG00000130559.19 | chr9:135883078:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1154:26346:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1370:41248:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2257:28409:1168,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2285:8427:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2430:21848:22032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:6768:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:5894:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:49783:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:34218:23111 | . | NO_LDAS | 0.0304 | GT | 1.9899 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:42419655-chr9:135883078 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 9 | ||||||
| KLF7--KLF6 | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | KLF7^ENSG00000118263.15 | chr2:207088458:- | KLF6^ENSG00000067082.15 | chr10:3779590:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1159:29768:20029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1325:20489:29711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2116:15772:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:42340:8735,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2256:36709:11874,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2445:19995:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:1955:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:4681:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:3095:19454 | . | YES_LDAS | 0.0304 | GT | 1.7819 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:207088458-chr10:3779590 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 9 | ||||||
| ING2--DNAJC5 | 9 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | ING2^ENSG00000168556.7 | chr4:183505260:+ | DNAJC5^ENSG00000101152.11 | chr20:63895276:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1250:51571:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1421:38974:28941,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2250:28215:24765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:48157:21696,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2415:19445:3802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2480:24801:17226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:16557:23181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:44468:28254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:3799:9547 | . | NO_LDAS | 0.0101 | GC | 1.3383 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr4--chr20]""]" | chr4:183505260-chr20:63895276 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 9 | |||||||
| HLA-C--NUMA1 | 9 | 0 | 9.0 | 0.0 | INCL_NON_REF_SPLICE | HLA-C^ENSG00000204525.17 | chr6:31269493:- | NUMA1^ENSG00000137497.18 | chr11:72013673:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1214:31515:8623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:3087:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1420:34622:7978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2348:51530:27567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2362:2699:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:41507:5386,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:30148:3760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:4673:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:36475:22565 | . | NO_LDAS | 0.0304 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:31269493-chr11:72013673 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| FBXO31--C16orf95 | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | FBXO31^ENSG00000103264.18 | chr16:87333886:- | C16orf95^ENSG00000260456.7 | chr16:87315823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2362:12488:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:44314:17506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37809:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:35738:3859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:38141:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:38772:3508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:26306:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:19866:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:26079:13303 | . | YES_LDAS | 0.0304 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[9567]""]" | chr16:87333886-chr16:87315823 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| CCDC74A--PTPN12 | 9 | 0 | 9.0 | 0.0 | ONLY_REF_SPLICE | CCDC74A^ENSG00000163040.15 | chr2:131528627:+ | PTPN12^ENSG00000127947.16 | chr7:77585543:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1113:3184:21206,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:20521:20043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2149:29275:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:34266:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:16371:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42752:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:34711:21640,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:25966:23672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:46700:20267 | . | YES_LDAS | 0.0304 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:131528627-chr7:77585543 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| AC073107.1--PSPH | 9 | 0 | 1.27 | 0.0 | ONLY_REF_SPLICE | AC073107.1^ENSG00000272693.4 | chr7:65770467:- | PSPH^ENSG00000146733.14 | chr7:56021231:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:33368:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:5627:24120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:30431:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:8847:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665 | . | YES_LDAS | 0.0043 | GT | 1.9086 | AG | 1.9656 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:9.60Mb]""]" | chr7:65770467-chr7:56021231 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| MIR4713HG--GLDN | 9 | 1 | 9.0 | 0.28 | ONLY_REF_SPLICE | MIR4713HG^ENSG00000259240.1 | chr15:51037681:+ | GLDN^ENSG00000186417.14 | chr15:51383785:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1122:9486:27189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1171:51409:16960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1381:47712:3018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2344:47639:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2430:9090:21066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:1283:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:40698:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:30456:20603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:7205:6955 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586 | YES_LDAS | 0.0313 | GT | 1.9656 | AG | 1.7056 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]" | chr15:51037681-chr15:51383785 | False | 1 | PASS | 10 | ||||||||||
| SSBP1--MGAM | 8 | 0 | 8.0 | 0.0 | ONLY_REF_SPLICE | SSBP1^ENSG00000106028.11 | chr7:141750384:+ | MGAM^ENSG00000257335.8 | chr7:142005529:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1120:36159:6661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1391:45738:27231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2174:18936:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2388:33975:11425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:12908:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:18337:13345,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:42008:12532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:5045:26082 | . | YES_LDAS | 0.0271 | GT | 1.8295 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:141750384-chr7:142005529 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 8 | |||||||
| PKD1--NPIPA3 | 8 | 1 | 8.0 | 0.89 | ONLY_REF_SPLICE | PKD1^ENSG00000008710.20 | chr16:2097868:- | NPIPA3^ENSG00000224712.12 | chr16:14716068:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1155:13653:18067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1304:5013:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:45212:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:32381:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:25723:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2379:29315:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:5005:12448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:40568:19202 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:40188:14228 | YES_LDAS | 0.0301 | GT | 1.8323 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:12.57Mb]""]" | chr16:2097868-chr16:14716068 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| GNG10--UGCG | 8 | 1 | 8.0 | 1.0 | ONLY_REF_SPLICE | GNG10^ENSG00000242616.4 | chr9:111666946:+ | UGCG^ENSG00000148154.10 | chr9:111914605:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1178:44977:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1201:4090:10080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1251:22665:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1337:26419:26194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1480:47048:28352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23288:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:43861:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:23620:23812 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:8969:18669 | YES_LDAS | 0.0305 | GT | 1.9329 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]" | chr9:111666946-chr9:111914605 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 9 | |||
| BOLA2B--SMG1P2 | 8 | 1 | 2.79 | 0.09 | ONLY_REF_SPLICE | BOLA2B^ENSG00000169627.9 | chr16:30193358:- | SMG1P2^ENSG00000205534.6 | chr16:29548762:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1142:22463:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2105:17835:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2269:32947:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:2448:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:40261:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:38182:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:49394:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:24218:19160 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493 | YES_LDAS | 0.0097 | GT | 1.9329 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]" | chr16:30193358-chr16:29548762 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 9 | |||||||
| UBE2Q2P1--GOLGA2P6 | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | UBE2Q2P1^ENSG00000189136.9 | chr15:84435875:- | GOLGA2P6^ENSG00000241621.1 | chr10:30370881:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:50665:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:40131:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:24954:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:41968:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2295:45123:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:48375:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:42210:26642 | . | YES_LDAS | 0.0237 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:84435875-chr10:30370881 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| SAMD5--AL033504.1 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147947472:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1229:1121:17184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:45317:2121,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2326:12383:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2439:25100:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2483:21888:29585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:42793:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:36313:12812 | . | YES_LDAS | 0.0237 | GT | 1.8295 | AG | 1.5058 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147947472 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 7 | |||
| RMND5A--ANAPC1P2 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | RMND5A^ENSG00000153561.13 | chr2:86741069:+ | ANAPC1P2^ENSG00000231259.5 | chr2:87052992:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1103:22705:4573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2244:3257:20743,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:10894:8973,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15813:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:40649:8833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:3330:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:32147:28016 | . | YES_LDAS | 0.0237 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.25Mb]""]" | chr2:86741069-chr2:87052992 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 7 | ||||||
| OR51M1--ABR | 7 | 0 | 7.0 | 0.0 | INCL_NON_REF_SPLICE | OR51M1^ENSG00000184698.5 | chr11:5392729:+ | ABR^ENSG00000159842.15 | chr17:1100735:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1176:16193:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:4018:14494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1389:22212:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:43222:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:19397:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:48585:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:28522:20813 | . | YES_LDAS | 0.0237 | GT | 1.9656 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:5392729-chr17:1100735 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| EIF4E3--FOXP1 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | EIF4E3^ENSG00000163412.13 | chr3:71690010:- | FOXP1^ENSG00000114861.23 | chr3:71493555:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1151:40325:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2107:32761:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:9284:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:12561:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:47598:17899,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2419:17811:4923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:38473:28100 | . | YES_LDAS | 0.0237 | GT | 1.7056 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr3:0.09Mb]"",""NEIGHBORS[91425]""]" | chr3:71690010-chr3:71493555 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 7 | |||
| ATAD3B--AC124947.1 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | ATAD3B^ENSG00000160072.20 | chr1:1477350:+ | AC124947.1^ENSG00000257252.6 | chr12:93339736:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1183:31621:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1373:20432:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:30779:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:32648:17787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:28627:13009,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:37648:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:39775:13765 | . | NO_LDAS | 0.0237 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:1477350-chr12:93339736 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| AC215522.2--AL627309.5 | 7 | 0 | 7.0 | 0.0 | ONLY_REF_SPLICE | AC215522.2^ENSG00000282572.2 | chr7:20834:- | AL627309.5^ENSG00000241860.7 | chr1:173862:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:37421:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:10190:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:15991:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:45325:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:12585:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:45770:21962,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:45471:24891 | . | YES_LDAS | 0.0237 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:20834-chr1:173862 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 7 | |||||||
| ZNF544--ZNF8 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | ZNF544^ENSG00000198131.14 | chr19:58246794:+ | ZNF8^ENSG00000278129.2 | chr19:58285717:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1421:45414:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2143:25294:27273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:12625:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:11072:24274,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:48504:25129,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:9308:4685 | . | YES_LDAS | 0.0203 | GT | 1.5219 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS[1460]""]" | chr19:58246794-chr19:58285717 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| SMURF2P1--LRRC37B | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | SMURF2P1^ENSG00000248121.8 | chr17:30610942:+ | LRRC37B^ENSG00000185158.12 | chr17:32045700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1157:28959:12182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1466:5911:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2268:45341:24415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2368:6590:21080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1302:17981:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:17746:13079 | . | YES_LDAS | 0.0203 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr17:1.39Mb]""]" | chr17:30610942-chr17:32045700 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| RPL23AP53--SEPTIN14 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | RPL23AP53^ENSG00000223508.5 | chr8:232129:- | SEPTIN14^ENSG00000154997.9 | chr7:55796092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1194:22277:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2109:21443:9085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2188:29938:27890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2478:22333:22873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2482:10425:18221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:8524:9127 | . | YES_LDAS | 0.0203 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:232129-chr7:55796092 | True | aih_curated_blacklist | score(5) | 0 | aih_curated_blacklist | score(5) | FAIL | 6 | ||||||
| PCGF6--MNX1 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PCGF6^ENSG00000156374.16 | chr10:103350983:- | MNX1^ENSG00000130675.15 | chr7:157005174:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1385:49152:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2139:48990:24821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780 | . | NO_LDAS | 0.0101 | GT | 1.2419 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:103350983-chr7:157005174 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| PCGF6--C10orf99 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PCGF6^ENSG00000156374.16 | chr10:103350983:- | C10orf99^ENSG00000188373.5 | chr10:84184831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1385:49152:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2139:48990:24821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780 | . | NO_LDAS | 0.0101 | GT | 1.2419 | AG | 1.231 | "[""INTRACHROMOSOMAL[chr10:19.12Mb]""]" | chr10:103350983-chr10:84184831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| MICAL2--AP2B1 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | MICAL2^ENSG00000133816.17 | chr11:12358585:+ | AP2B1^ENSG00000006125.18 | chr17:35724452:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1211:36879:3901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1445:20384:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2132:8831:4755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2369:34266:13107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:31855:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:33166:6044 | . | NO_LDAS | 0.0203 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:12358585-chr17:35724452 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| IGH-@-ext--ACOT8 | 6 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | IGH-@-ext^IGH-.g@-ext | chr14:106680116:+ | ACOT8^ENSG00000101473.17 | chr20:45842020:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2235:49710:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2328:20440:28646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:40374:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:32349:20968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:14365:25157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:47518:6213 | . | NO_LDAS | 0.0101 | GA | 1.9086 | AA | 1.1033 | "[""INTERCHROMOSOMAL[chr14--chr20]""]" | chr14:106680116-chr20:45842020 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| HRH1--ATG7 | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | HRH1^ENSG00000196639.7 | chr3:11154554:+ | ATG7^ENSG00000197548.12 | chr3:11298686:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:49508:8595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1241:7019:27371,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:34040:9688,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:20181:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:13410:25914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:31305:12574 | . | YES_LDAS | 0.0203 | GT | 1.2867 | AG | 1.7968 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]" | chr3:11154554-chr3:11298686 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 | |||
| EXOC4--LRGUK | 6 | 0 | 6.0 | 0.0 | ONLY_REF_SPLICE | EXOC4^ENSG00000131558.15 | chr7:134007835:+ | LRGUK^ENSG00000155530.3 | chr7:134163397:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:3759:10879,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1162:11257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:12739:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6210:26558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:42041:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:21799:1631 | . | YES_LDAS | 0.0203 | GT | 1.9899 | AG | 1.8295 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]" | chr7:134007835-chr7:134163397 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| CFAP53--MYO5B | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP53^ENSG00000172361.6 | chr18:50227377:- | MYO5B^ENSG00000167306.20 | chr18:50055378:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1428:10918:11705,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1498:22212:8903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:12310:20113,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:43804:11663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:20909:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1103:51101:9057 | . | YES_LDAS | 0.0203 | GT | 1.8323 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr18:0.03Mb]"",""NEIGHBORS[32046]""]" | chr18:50227377-chr18:50055378 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| BICD2--EEF1DP2 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | BICD2^ENSG00000185963.14 | chr9:92764505:- | EEF1DP2^ENSG00000226721.2 | chr9:92837729:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:50980:25017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2183:19016:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:19429:22215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2214:21791:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:5854:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:18758:23238 | . | YES_LDAS | 0.0203 | GT | 1.7819 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr9:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[71993]""]" | chr9:92764505-chr9:92837729 | False | 0 | Read | count | too | low: | 6 | < | 8 | FAIL | 6 | |||
| ANXA1--AC124852.1 | 6 | 0 | 6.0 | 0.0 | INCL_NON_REF_SPLICE | ANXA1^ENSG00000135046.14 | chr9:73163532:+ | AC124852.1^ENSG00000248994.2 | chr5:1958734:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1294:23369:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:10821:24989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:40932:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:41070:17100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:1558:25648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:20610:27595 | . | NO_LDAS | 0.0203 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chr5]""]" | chr9:73163532-chr5:1958734 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 6 | |||||||
| AC009533.1--MIR4307HG | 6 | 0 | 5.14 | 0.0 | INCL_NON_REF_SPLICE | AC009533.1^ENSG00000111788.10 | chr12:9310083:+ | MIR4307HG^ENSG00000257612.2 | chr14:26881418:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1375:6347:5582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:43019:6157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2328:36871:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:39314:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:18418:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:23959:21542 | . | NO_LDAS | 0.0174 | GT | 1.5656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:9310083-chr14:26881418 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 6 | ||||||
| SLC7A5--SMG1P4 | 6 | 7 | 6.0 | 3.82 | ONLY_REF_SPLICE | SLC7A5^ENSG00000103257.9 | chr16:87868885:- | SMG1P4^ENSG00000185710.9 | chr16:21916024:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1328:15206:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2140:6331:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2260:31111:24176,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:24340:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:32349:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:1251:20631 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1419:2294:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:41952:28380,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2432:33392:12770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592 | YES_LDAS | 0.0332 | GT | 1.5301 | AG | 1.9656 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr16:65.91Mb]""]" | chr16:87868885-chr16:21916024 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 13 | |||||||
| UPK3B--PMS2P3 | 5 | 0 | 4.67 | 0.0 | ONLY_REF_SPLICE | UPK3B^ENSG00000243566.7 | chr7:76511882:+ | PMS2P3^ENSG00000127957.18 | chr7:75514784:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1108:4697:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1288:14057:5680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:34857:18529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2309:17673:27273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:2505:23448 | . | YES_LDAS | 0.0158 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.98Mb]""]" | chr7:76511882-chr7:75514784 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| SLC44A3-AS1--SETX | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | SLC44A3-AS1^ENSG00000224081.9 | chr1:94638437:- | SETX^ENSG00000107290.14 | chr9:132331448:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1148:5458:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:9244:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2176:50519:23294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:8168:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:46547:20057 | . | YES_LDAS | 0.0169 | GC | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:94638437-chr9:132331448 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| RPL14--MPRIP | 5 | 0 | 2.5 | 0.0 | INCL_NON_REF_SPLICE | RPL14^ENSG00000188846.14 | chr3:40462017:+ | MPRIP^ENSG00000133030.22 | chr17:17136278:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1297:29024:17591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2410:6420:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:25124:13471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:38368:12756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:31338:13919 | . | YES_LDAS | 0.0085 | GT | 1.6895 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:40462017-chr17:17136278 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| RN7SL828P--RN7SL4P | 5 | 0 | 1.58 | 0.0 | INCL_NON_REF_SPLICE | RN7SL828P^ENSG00000272075.2 | chr11:118067471:+ | RN7SL4P^ENSG00000263740.2 | chr3:15738565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2382:49645:17156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:35043:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084 | . | NO_LDAS | 0.0053 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:118067471-chr3:15738565 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 5 | ||||||
| RN7SL564P--RN7SL128P | 5 | 0 | 1.16 | 0.0 | INCL_NON_REF_SPLICE | RN7SL564P^ENSG00000240606.3 | chr6:122745488:+ | RN7SL128P^ENSG00000240869.3 | chr6:20421837:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:15044:18627,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:7901:16428 | . | YES_LDAS | 0.0039 | GT | 1.8892 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:102.32Mb]""]" | chr6:122745488-chr6:20421837 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 5 | ||||||
| MUC20--AC026412.4 | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | MUC20^ENSG00000176945.17 | chr3:195729739:+ | AC026412.4^ENSG00000288549.1 | chr5:1641022:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2123:31418:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2489:12520:5092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1153:44144:5330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43319:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:31912:29319 | . | YES_LDAS | 0.0169 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:195729739-chr5:1641022 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| MT2A--IGH-@-ext | 5 | 0 | 3.86 | 0.0 | INCL_NON_REF_SPLICE | MT2A^ENSG00000125148.7 | chr16:56609051:+ | IGH-@-ext^IGH-.g@-ext | chr14:106324183:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1325:21694:5932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1356:23854:27189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2201:1639:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:19259:15559,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:25521:4769 | . | NO_LDAS | 0.0131 | AG | 1.8892 | CA | 1.4566 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:56609051-chr14:106324183 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 5 | |||||||
| LINC02728--GAB2 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | LINC02728^ENSG00000251323.3 | chr11:78425337:- | GAB2^ENSG00000033327.13 | chr11:78280901:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1427:10433:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:12633:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1227:29453:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:34541:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2139:40406:22088 | . | YES_LDAS | 0.0169 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[5634]""]" | chr11:78425337-chr11:78280901 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| HULC--AGAP5 | 5 | 0 | 5.0 | 0.0 | INCL_NON_REF_SPLICE | HULC^ENSG00000285219.2 | chr6:8547214:+ | AGAP5^ENSG00000172650.14 | chr10:73697720:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1362:3476:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:28757:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:15505:25872,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:32478:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:47784:14466 | . | NO_LDAS | 0.0169 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr10]""]" | chr6:8547214-chr10:73697720 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 | |||
| GUSBP13--NAIP | 5 | 0 | 0.83 | 0.0 | ONLY_REF_SPLICE | GUSBP13^ENSG00000198237.8 | chr5:69920867:+ | NAIP^ENSG00000249437.8 | chr5:71003857:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2120:31572:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:8774:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:28943:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:39816:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:21888:16414 | . | YES_LDAS | 0.0028 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:1.05Mb]""]" | chr5:69920867-chr5:71003857 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| FOXO1--LINC00598 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40350302:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:7715:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2326:51563:20757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:27212:25353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:52202:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:16994:14410 | . | YES_LDAS | 0.0169 | GT | 1.7232 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40350302 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 5 | |||
| CCDC18-AS1--TMED5 | 5 | 0 | 5.0 | 0.0 | ONLY_REF_SPLICE | CCDC18-AS1^ENSG00000223745.8 | chr1:93339357:- | TMED5^ENSG00000117500.13 | chr1:93160226:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1125:28927:26951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2213:43108:15166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2283:21476:17941,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:17382:10318,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:47687:26657 | . | YES_LDAS | 0.0169 | GT | 1.9086 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.08Mb]"",""NEIGHBORS[81670]""]" | chr1:93339357-chr1:93160226 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| AC092032.2--PMS2CL | 5 | 0 | 2.5 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4989177:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:8410:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:10409:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:2618:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:30804:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:1534:7950 | . | YES_LDAS | 0.0085 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.72Mb]""]" | chr7:4989177-chr7:6731897 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| AC242842.1--SEC22B2P | 5 | 1 | 1.25 | 0.25 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | SEC22B2P^ENSG00000274423.1 | chr1:149351251:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:27786:11271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2246:44791:18585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:51425:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2243:19122:5596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:6218:14186 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:13750:6661 | YES_LDAS | 0.005 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.25Mb]""]" | chr1:149608516-chr1:149351251 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 6 | ||||||
| SLC7A5--SMG1P4 | 5 | 7 | 5.0 | 3.18 | INCL_NON_REF_SPLICE | SLC7A5^ENSG00000103257.9 | chr16:87868885:- | SMG1P4^ENSG00000185710.9 | chr16:21919103:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2319:37915:6199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:38368:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:23822:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:37712:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:18337:17857 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1419:2294:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:41952:28380,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2432:33392:12770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592 | YES_LDAS | 0.0277 | GT | 1.5301 | AG | 1.9656 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr16:65.91Mb]""]" | chr16:87868885-chr16:21919103 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 12 | |||||||
| TRAF3IP2--C5AR1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | TRAF3IP2^ENSG00000056972.20 | chr6:111595703:- | C5AR1^ENSG00000197405.8 | chr19:47319781:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1224:42162:2177,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:9300:13191,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:22058:17296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:19138:22915 | . | YES_LDAS | 0.0135 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:111595703-chr19:47319781 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 4 | ||||||
| SYN2--PPARG | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | SYN2^ENSG00000157152.17 | chr3:12183372:+ | PPARG^ENSG00000132170.23 | chr3:12379704:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1109:2044:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1408:4762:13653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:44904:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:50300:2261 | . | YES_LDAS | 0.0135 | GT | 1.6729 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.10Mb]"",""NEIGHBORS[95336]""]" | chr3:12183372-chr3:12379704 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| SMIM13--STIL | 4 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | STIL^ENSG00000123473.16 | chr1:47313156:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1430:10821:3718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:30116:22117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2359:18847:24344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:40358:25367 | . | NO_LDAS | 0.0068 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:11094389-chr1:47313156 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| RBM14--C11orf80 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | RBM14^ENSG00000239306.5 | chr11:66617057:+ | C11orf80^ENSG00000173715.18 | chr11:66759043:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2405:7731:20954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:12512:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:39492:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:25861:15166 | . | YES_LDAS | 0.0135 | GT | 1.7465 | AG | 1.9656 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.11Mb]""]" | chr11:66617057-chr11:66759043 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| PINX1--RP1L1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10826152:- | RP1L1^ENSG00000183638.6 | chr8:10623220:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1120:4463:9267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:1534:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:13475:25185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:29776:21164 | . | YES_LDAS | 0.0135 | GT | 1.7232 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10826152-chr8:10623220 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| NOS1AP--ZNF793-AS1 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | NOS1AP^ENSG00000198929.13 | chr1:162070282:+ | ZNF793-AS1^ENSG00000266916.7 | chr19:37497358:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:19211:29655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1452:21233:14158,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2493:34784:27483,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14624:21682 | . | NO_LDAS | 0.0135 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:162070282-chr19:37497358 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | |||||||
| MRPS6--AP000317.1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | AP000317.1^ENSG00000214955.5 | chr21:34262820:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1139:7456:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1181:18264:4867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:1097:4195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:32276:10304 | . | YES_LDAS | 0.0135 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]" | chr21:34073745-chr21:34262820 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| LINC02210--CRHR1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | LINC02210^ENSG00000204650.14 | chr17:45630158:+ | CRHR1^ENSG00000120088.15 | chr17:45807010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1295:1218:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46183:3564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43780:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:42833:22621 | . | YES_LDAS | 0.0135 | GT | 1.8323 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr17:0.13Mb]""]" | chr17:45630158-chr17:45807010 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| KRTAP5-AS1--AP000867.5 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP5-AS1^ENSG00000233930.4 | chr11:1598289:+ | AP000867.5^ENSG00000286948.1 | chr11:71563684:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:11509:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2231:14365:14256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2323:37033:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:34525:21934 | . | YES_LDAS | 0.0135 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:69.96Mb]""]" | chr11:1598289-chr11:71563684 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| KIAA0753--PITPNM3 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | KIAA0753^ENSG00000198920.11 | chr17:6589779:- | PITPNM3^ENSG00000091622.16 | chr17:6538082:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1124:30237:1589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1150:39711:10935,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:9972:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:48003:19048 | . | YES_LDAS | 0.0135 | GT | 1.9086 | AG | 1.5058 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[21592]""]" | chr17:6589779-chr17:6538082 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| JUND--CCDC13 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | JUND^ENSG00000130522.6 | chr19:18280504:- | CCDC13^ENSG00000244607.7 | chr3:42739711:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2149:43707:14746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2482:23037:12770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:13216:10276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:17156:24387 | . | NO_LDAS | 0.0135 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:18280504-chr3:42739711 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 4 | ||||||
| INTS9-AS1--WDR37 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | INTS9-AS1^ENSG00000254034.2 | chr8:28798641:+ | WDR37^ENSG00000047056.16 | chr10:1080011:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1417:42971:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1490:8807:11747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2470:11574:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:28999:10542 | . | YES_LDAS | 0.0135 | GT | 1.9329 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr8--chr10]""]" | chr8:28798641-chr10:1080011 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| IGH-@-ext--MT2A | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | IGH-@-ext^IGH-.g@-ext | chr14:106324197:+ | MT2A^ENSG00000125148.7 | chr16:56609034:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:3370:15895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:20456:10767,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2395:20998:1364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1262:13159:9225 | . | NO_LDAS | 0.0135 | CC | 1.4566 | GT | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:106324197-chr16:56609034 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | |||||||
| GDAP1--MIR2052HG | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | GDAP1^ENSG00000104381.14 | chr8:74363053:+ | MIR2052HG^ENSG00000254349.6 | chr8:74612853:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1175:13451:8384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:41660:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:22997:8917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2254:31863:11803 | . | YES_LDAS | 0.0135 | GT | 1.7465 | AG | 1.9219 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]" | chr8:74363053-chr8:74612853 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| FP325317.1--BMS1P10 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | FP325317.1^ENSG00000277737.3 | chr9:43125880:- | BMS1P10^ENSG00000237238.3 | chr9:63309312:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:23514:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1428:15036:5974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:35261:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2239:39727:7095 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr9:20.17Mb]""]" | chr9:43125880-chr9:63309312 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| FBXL5--AC099550.1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | FBXL5^ENSG00000118564.15 | chr4:15612266:- | AC099550.1^ENSG00000251379.1 | chr4:15362523:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1464:45519:8581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:27657:6591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:17601:14676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1333:37761:7754 | . | YES_LDAS | 0.0135 | GT | 1.9219 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr4:0.18Mb]""]" | chr4:15612266-chr4:15362523 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| CNTNAP3C--BX005040.4 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61097036:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1324:45034:12308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:41377:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:48901:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:5369:6353 | . | YES_LDAS | 0.0135 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61097036 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| CMTM8--CMTM7 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | CMTM8^ENSG00000170293.9 | chr3:32239119:+ | CMTM7^ENSG00000153551.14 | chr3:32449454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:7423:9884,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2107:37680:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:20974:8356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2162:49038:18964 | . | YES_LDAS | 0.0135 | GT | 1.9656 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]" | chr3:32239119-chr3:32449454 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 4 | ||||||
| CCDC30--NUP85 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | CCDC30^ENSG00000186409.18 | chr1:42521256:+ | NUP85^ENSG00000125450.11 | chr17:75231340:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1447:19785:11341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2163:39508:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2418:35188:5484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:3896:9828 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:42521256-chr17:75231340 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| CA13--CA3 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85281639:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1116:1615:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:48780:12854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:30787:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1318:17617:18908 | . | YES_LDAS | 0.0135 | GT | 1.7968 | AG | 1.8892 | "[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]" | chr8:85281639-chr8:85439712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| BX276092.9--AIFM2 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | BX276092.9^ENSG00000283599.2 | chrX:71668095:+ | AIFM2^ENSG00000042286.15 | chr10:70132789:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1197:21896:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2153:42599:9576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:28749:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:35844:23882 | . | NO_LDAS | 0.0135 | GT | 1.8062 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:71668095-chr10:70132789 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 4 | |||||||
| BX005040.4--CNTNAP3C | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61096836:- | CNTNAP3C^ENSG00000283378.1 | chr9:61425702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2102:8540:12406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2212:5482:3270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:36030:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:17860:26755 | . | YES_LDAS | 0.0135 | GT | 1.8062 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61096836-chr9:61425702 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| ACTB--HEYL | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | ACTB^ENSG00000075624.17 | chr7:5528004:- | HEYL^ENSG00000163909.8 | chr1:39624057:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1251:11412:11103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2486:10263:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:49014:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:32462:7600 | . | NO_LDAS | 0.0135 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:5528004-chr1:39624057 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| AC091057.4--AC091057.6 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | AC091057.6^ENSG00000285035.1 | chr15:30716220:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:21549:4167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:39290:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:7723:24050,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:20092:9912 | . | YES_LDAS | 0.0135 | GT | 1.8892 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26911]""]" | chr15:30750556-chr15:30716220 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| AC023593.1--C5AR1 | 4 | 0 | 4.0 | 0.0 | ONLY_REF_SPLICE | AC023593.1^ENSG00000285600.1 | chr3:127625218:- | C5AR1^ENSG00000197405.8 | chr19:47319781:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2110:47388:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1214:6995:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1406:7456:19945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2333:6469:7081 | . | NO_LDAS | 0.0135 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:127625218-chr19:47319781 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 4 | ||||||
| AC008740.1--CRYM-AS1 | 4 | 0 | 4.0 | 0.0 | INCL_NON_REF_SPLICE | AC008740.1^ENSG00000257403.2 | chr16:21352138:+ | CRYM-AS1^ENSG00000189149.12 | chr16:21315907:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1243:17665:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:25052:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:10457:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:49136:19328 | . | YES_LDAS | 0.0135 | GT | 1.7232 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]" | chr16:21352138-chr16:21315907 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 4 | |||
| AC114763.1--NXPH2 | 4 | 1 | 4.0 | 1.0 | ONLY_REF_SPLICE | AC114763.1^ENSG00000228043.5 | chr2:138500755:- | NXPH2^ENSG00000144227.5 | chr2:138671665:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1179:8273:4853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1428:15813:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:39007:9295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:37413:25171 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2221:32527:10682 | YES_LDAS | 0.0169 | GT | 1.8892 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:0.17Mb]""]" | chr2:138500755-chr2:138671665 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| AC005993.1--RGS6 | 4 | 1 | 4.0 | 0.33 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71848736:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1271:14672:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:25521:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:41539:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:50365:8146 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:14713:4377 | YES_LDAS | 0.0146 | GT | 1.9656 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71848736-chr14:72352095 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| ZBED3-AS1--PDE8B | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | ZBED3-AS1^ENSG00000250802.7 | chr5:77118521:+ | PDE8B^ENSG00000113231.14 | chr5:77311997:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1166:24550:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1302:9422:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:24170:26811 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]" | chr5:77118521-chr5:77311997 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| WDR27--AL009176.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL009176.1^ENSG00000285887.1 | chr6:169421174:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:11687:27749,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2197:47728:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:49548:28618 | . | YES_LDAS | 0.0101 | GT | 1.6729 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr6:0.03Mb]"",""NEIGHBORS[32056]""]" | chr6:169582836-chr6:169421174 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| TNFAIP8--HSD17B4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | TNFAIP8^ENSG00000145779.8 | chr5:119268907:+ | HSD17B4^ENSG00000133835.17 | chr5:119412972:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1227:8580:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1276:9139:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:42469:16021 | . | YES_LDAS | 0.0101 | GT | 1.7232 | AG | 1.9656 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.05Mb]"",""NEIGHBORS[52785]""]" | chr5:119268907-chr5:119412972 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| SULT1A3--SLX1A | 3 | 0 | 0.75 | 0.0 | INCL_NON_REF_SPLICE | SULT1A3^ENSG00000261052.6 | chr16:30203988:+ | SLX1A^ENSG00000132207.18 | chr16:30194740:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1181:8532:9898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:44314:23195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:5684:8805 | . | YES_LDAS | 0.0025 | GT | 1.7968 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1667]""]" | chr16:30203988-chr16:30194740 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| SMIM13--AL022098.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | SMIM13^ENSG00000224531.6 | chr6:11094389:+ | AL022098.1^ENSG00000287920.1 | chr6:11295769:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1470:22754:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:6008:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:5174:19861 | . | YES_LDAS | 0.0101 | GT | 1.6895 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.15Mb]""]" | chr6:11094389-chr6:11295769 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| RPS3AP11--SEPTIN7 | 3 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS3AP11^ENSG00000230116.1 | chr1:42491744:+ | SEPTIN7^ENSG00000122545.20 | chr7:35832804:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2212:22252:12000,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:26225:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:14680:17913 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:42491744-chr7:35832804 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| RPL14P1--RPL14P5 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | RPL14P1^ENSG00000139239.7 | chr12:62965657:+ | RPL14P5^ENSG00000225661.7 | chrX:1009346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2341:5482:23588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:44322:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:6995:1799 | . | YES_LDAS | 0.0101 | GT | 1.6402 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chrY]""]" | chr12:62965657-chrX:1009346 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| RPEL1--TSSK3 | 3 | 0 | 1.5 | 0.0 | INCL_NON_REF_SPLICE | RPEL1^ENSG00000235376.5 | chr10:103246527:+ | TSSK3^ENSG00000162526.7 | chr1:32362662:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2286:34347:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2457:18782:24120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:50980:7278 | . | NO_LDAS | 0.0051 | GT | 1.5546 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:103246527-chr1:32362662 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| RGS6--AC005993.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | RGS6^ENSG00000182732.18 | chr14:71964875:+ | AC005993.1^ENSG00000266869.2 | chr14:71908165:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:42850:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:37996:24863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:11865:3032 | . | YES_LDAS | 0.0101 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]" | chr14:71964875-chr14:71908165 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| PSMA5--RAD51B | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PSMA5^ENSG00000143106.13 | chr1:109412269:- | RAD51B^ENSG00000182185.18 | chr14:68291884:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1254:34331:19020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:14025:28548,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:28886:6227 | . | NO_LDAS | 0.0101 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:109412269-chr14:68291884 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| PPP1R7--PAEP | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | PPP1R7^ENSG00000115685.15 | chr2:241169867:+ | PAEP^ENSG00000122133.17 | chr9:135566192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:15505:7516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2277:14866:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:9575:24092 | . | YES_LDAS | 0.0101 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:241169867-chr9:135566192 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| PIH1D1--WASF3 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | PIH1D1^ENSG00000104872.11 | chr19:49447338:- | WASF3^ENSG00000132970.14 | chr13:26687521:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:11913:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:16962:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:51401:6773 | . | NO_LDAS | 0.0101 | GT | 1.7968 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr13]""]" | chr19:49447338-chr13:26687521 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| PICALM--SYTL2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | PICALM^ENSG00000073921.18 | chr11:85974708:- | SYTL2^ENSG00000137501.17 | chr11:85748423:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1362:50454:4965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1367:25901:20533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2201:20699:29319 | . | YES_LDAS | 0.0101 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.15Mb]""]" | chr11:85974708-chr11:85748423 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| NPM1P31--NPM1P4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1P31^ENSG00000214807.2 | chr10:124867902:+ | NPM1P4^ENSG00000226703.1 | chr13:27696868:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1404:10789:3578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2460:3111:13905,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2146:49500:16400 | . | NO_LDAS | 0.0101 | GT | 1.2867 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr13]""]" | chr10:124867902-chr13:27696868 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| MUC3A--MUC12 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | MUC3A^ENSG00000169894.18 | chr7:100966951:+ | MUC12^ENSG00000205277.9 | chr7:100990631:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2156:23425:7614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2172:10287:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:28385:11383 | . | YES_LDAS | 0.0101 | GT | 1.8892 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1276]""]" | chr7:100966951-chr7:100990631 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| MT2A--IGH-@-ext | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | MT2A^ENSG00000125148.7 | chr16:56609276:+ | IGH-@-ext^IGH-.g@-ext | chr14:106324182:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1369:40560:1140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2121:5749:11327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2397:9478:6941 | . | NO_LDAS | 0.0101 | TG | 1.5656 | GC | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:56609276-chr14:106324182 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| MRPS6--AP000317.1 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | AP000317.1^ENSG00000214955.5 | chr21:34293681:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1255:18539:19468,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2294:28029:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1211:9592:9267 | . | YES_LDAS | 0.0101 | GT | 1.8256 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]" | chr21:34073745-chr21:34293681 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| MED6--AL357153.2 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | MED6^ENSG00000133997.12 | chr14:70596611:- | AL357153.2^ENSG00000257759.2 | chr14:70453509:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1222:52113:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1469:8184:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:20003:19090 | . | YES_LDAS | 0.0101 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.03Mb]"",""NEIGHBORS[33793]""]" | chr14:70596611-chr14:70453509 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| LSR--IGH-@-ext | 3 | 0 | 1.5 | 0.0 | INCL_NON_REF_SPLICE | LSR^ENSG00000105699.17 | chr19:35266967:+ | IGH-@-ext^IGH-.g@-ext | chr14:105894285:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:23976:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:32058:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:8896:12826 | . | NO_LDAS | 0.0051 | GT | 1.5546 | GG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:35266967-chr14:105894285 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| LSR--IGH-@-ext | 3 | 0 | 1.5 | 0.0 | INCL_NON_REF_SPLICE | LSR^ENSG00000105699.17 | chr19:35266967:+ | IGH-@-ext^IGH-.g@-ext | chr14:105884646:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:23976:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:32058:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:8896:12826 | . | NO_LDAS | 0.0051 | GT | 1.5546 | GG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:35266967-chr14:105884646 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 3 | |||||||
| LINC00511--SLC39A11 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | LINC00511^ENSG00000227036.8 | chr17:72603103:- | SLC39A11^ENSG00000133195.11 | chr17:72649268:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2307:47639:9085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2327:32656:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:24040:16021 | . | YES_LDAS | 0.0101 | GT | 1.6729 | AG | 1.9086 | "[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]" | chr17:72603103-chr17:72649268 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| KRT8P10--KRT6B | 3 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT8P10^ENSG00000231203.1 | chr2:183071891:- | KRT6B^ENSG00000185479.6 | chr12:52451583:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2347:12148:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2483:46927:25143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:29218:23560 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:183071891-chr12:52451583 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| HPS5--FXYD2 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | HPS5^ENSG00000110756.18 | chr11:18291442:- | FXYD2^ENSG00000137731.14 | chr11:117819204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1284:7270:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:25763:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:38651:12910 | . | NO_LDAS | 0.0101 | GT | 1.5656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr11:99.48Mb]""]" | chr11:18291442-chr11:117819204 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | ||||||
| FOXO1--LINC00598 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40474095:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2407:27066:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:47323:17142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:50446:11846 | . | YES_LDAS | 0.0101 | GT | 1.7232 | AG | 1.8295 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40474095 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| FAM86DP--EVA1C | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | FAM86DP^ENSG00000244026.6 | chr3:75426450:- | EVA1C^ENSG00000166979.13 | chr21:32433151:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1284:13653:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2341:7990:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2472:1906:7894 | . | YES_LDAS | 0.0101 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr21]""]" | chr3:75426450-chr21:32433151 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| DMXL1--TNFAIP8 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | DMXL1^ENSG00000172869.14 | chr5:119244576:+ | TNFAIP8^ENSG00000145779.8 | chr5:119392816:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1136:40754:24064,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:1680:7306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:33198:25185 | . | YES_LDAS | 0.0101 | GT | 1.6402 | AG | 1.9899 | "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS[19554]""]" | chr5:119244576-chr5:119392816 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| CLVS1--PLS3 | 3 | 0 | 1.5 | 0.0 | ONLY_REF_SPLICE | CLVS1^ENSG00000177182.11 | chr8:61465804:+ | PLS3^ENSG00000102024.18 | chrX:115610243:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1119:43756:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433 | . | NO_LDAS | 0.0051 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chrX]""]" | chr8:61465804-chrX:115610243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| CFAP53--MYO5B | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP53^ENSG00000172361.6 | chr18:50227398:- | MYO5B^ENSG00000167306.20 | chr18:50055378:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2183:39840:5190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:6218:28002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1208:17617:21178 | . | YES_LDAS | 0.0101 | GT | 1.8062 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr18:0.03Mb]"",""NEIGHBORS[32046]""]" | chr18:50227398-chr18:50055378 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| BX005040.4--CNTNAP3C | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61096836:- | CNTNAP3C^ENSG00000283378.1 | chr9:61440605:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2329:18822:15251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:17868:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:41256:24653 | . | YES_LDAS | 0.0101 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61096836-chr9:61440605 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| BCKDHB--AL359715.4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.4^ENSG00000279022.1 | chr6:80440685:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1211:17916:5246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:23118:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2215:18701:20001 | . | YES_LDAS | 0.0101 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]" | chr6:80273221-chr6:80440685 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| AP003108.2--PPP1R32 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61438113:+ | PPP1R32^ENSG00000162148.11 | chr11:61481782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:6534:6885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2258:6081:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:9681:24471 | . | YES_LDAS | 0.0101 | GT | 1.9329 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61438113-chr11:61481782 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AL358790.1--PLS3 | 3 | 0 | 1.5 | 0.0 | ONLY_REF_SPLICE | AL358790.1^ENSG00000282772.1 | chr10:102851508:- | PLS3^ENSG00000102024.18 | chrX:115610243:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1119:43756:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433 | . | NO_LDAS | 0.0051 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chrX]""]" | chr10:102851508-chrX:115610243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AL139094.1--TMC4 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AL139094.1^ENSG00000220685.3 | chr6:5066922:- | TMC4^ENSG00000167608.12 | chr19:54171991:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1269:2456:8230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1479:17423:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:28935:4881 | . | NO_LDAS | 0.0101 | GT | 1.4566 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:5066922-chr19:54171991 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | ||||||
| AF064860.2--IGSF5 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AF064860.2^ENSG00000231713.2 | chr21:39727992:+ | IGSF5^ENSG00000183067.5 | chr21:39765535:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1489:21929:21668,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:42550:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:23490:24597 | . | YES_LDAS | 0.0101 | GT | 1.7465 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""NEIGHBORS[14727]""]" | chr21:39727992-chr21:39765535 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AC127502.3--AC135983.2 | 3 | 0 | 1.5 | 0.0 | ONLY_REF_SPLICE | AC127502.3^ENSG00000283345.1 | chr15:30513698:+ | AC135983.2^ENSG00000223509.8 | chr15:32533368:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1328:39460:22159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:39589:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:8394:23560 | . | YES_LDAS | 0.0051 | GT | 1.5329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:2.01Mb]""]" | chr15:30513698-chr15:32533368 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AC116533.1--HNRNPH2 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AC116533.1^ENSG00000244398.1 | chr11:16974837:- | HNRNPH2^ENSG00000126945.9 | chrX:101411936:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2215:22261:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2324:18199:13919,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:28579:28814 | . | YES_LDAS | 0.0101 | GC | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:16974837-chrX:101411936 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| AC107959.3--TNFRSF10B | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AC107959.3^ENSG00000253616.5 | chr8:23074436:- | TNFRSF10B^ENSG00000120889.13 | chr8:23043243:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1235:35221:22159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1408:21306:3158,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2236:34687:11005 | . | YES_LDAS | 0.0101 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""NEIGHBORS[2346]""]" | chr8:23074436-chr8:23043243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| AC097500.1--FSIP2-AS1 | 3 | 0 | 3.0 | 0.0 | INCL_NON_REF_SPLICE | AC097500.1^ENSG00000287129.1 | chr2:185950644:- | FSIP2-AS1^ENSG00000231646.6 | chr2:185800148:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2208:36402:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:34209:26628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:47534:11958 | . | YES_LDAS | 0.0101 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.15Mb]""]" | chr2:185950644-chr2:185800148 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 3 | |||
| AC010974.2--GPR39 | 3 | 0 | 3.0 | 0.0 | ONLY_REF_SPLICE | AC010974.2^ENSG00000286068.1 | chr2:132686465:+ | GPR39^ENSG00000183840.7 | chr2:132645101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1114:9624:12882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1124:25391:2667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:10886:21934 | . | YES_LDAS | 0.0101 | GT | 1.9656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr2:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[38642]""]" | chr2:132686465-chr2:132645101 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 3 | ||||||
| AC005993.1--RGS6 | 3 | 2 | 3.0 | 0.71 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71908434:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:8540:8258,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2189:42170:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1416:17819:27665 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2226:3904:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:14713:4377 | YES_LDAS | 0.0125 | GT | 1.8892 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71908434-chr14:72352095 | False | 0 | Read | count | too | low: | 5 | < | 8 | FAIL | 5 | |||
| WDR27--AL135910.1 | 3 | 3 | 3.0 | 1.57 | INCL_NON_REF_SPLICE | WDR27^ENSG00000184465.16 | chr6:169582836:- | AL135910.1^ENSG00000272848.2 | chr6:169433402:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2428:6250:24302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:11113:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:16420:3859 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:51312:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:20473:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011 | YES_LDAS | 0.0154 | GT | 1.6729 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]" | chr6:169582836-chr6:169433402 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 6 | |||
| WASH5P--WASH6P | 3 | 3 | 3.0 | 1.0 | ONLY_REF_SPLICE | WASH5P^ENSG00000282458.1 | chr19:66346:- | WASH6P^ENSG00000182484.15 | chrX:156021694:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1363:17682:24625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:3565:6843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:7310:12462 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:32478:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1221:47793:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:11541:7292 | YES_LDAS | 0.0135 | GT | 1.9656 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chrX]""]" | chr19:66346-chrX:156021694 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 6 | |||||||
| ZNF90P1--RINL | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF90P1^ENSG00000241738.1 | chr3:101358777:+ | RINL^ENSG00000187994.14 | chr19:38871870:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1328:4503:10346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:41458:26657 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:101358777-chr19:38871870 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| ZNF587B--ZNF154 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF587B^ENSG00000269343.9 | chr19:57840908:+ | ZNF154^ENSG00000179909.15 | chr19:57704979:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2171:10352:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2287:19817:15573 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.9329 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]" | chr19:57840908-chr19:57704979 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 2 | ||||||
| ZFP2--C5AR1 | 2 | 0 | 0.4 | 0.0 | ONLY_REF_SPLICE | ZFP2^ENSG00000198939.8 | chr5:178913999:+ | C5AR1^ENSG00000197405.8 | chr19:47319781:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:6890:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:12043:15811 | . | YES_LDAS | 0.0014 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:178913999-chr19:47319781 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| ZBED3-AS1--PDE8B | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ZBED3-AS1^ENSG00000250802.7 | chr5:77118521:+ | PDE8B^ENSG00000113231.14 | chr5:77325539:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2152:37162:14816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2426:52048:25550 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.5546 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]" | chr5:77118521-chr5:77325539 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| WDR72--AC011029.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | WDR72^ENSG00000166415.15 | chr15:53684542:- | AC011029.1^ENSG00000287352.1 | chr8:76306467:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1458:39330:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:51724:17254 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:53684542-chr8:76306467 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| WDR70--NACAD | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR70^ENSG00000082068.9 | chr5:37396574:+ | NACAD^ENSG00000136274.9 | chr7:45085185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:25950:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:32017:12630 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 0.9968 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:37396574-chr7:45085185 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| VPS16--LHX9 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VPS16^ENSG00000215305.10 | chr20:2861678:+ | LHX9^ENSG00000143355.16 | chr1:197916022:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:43618:4391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:41741:3802 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:2861678-chr1:197916022 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| VNN2--NIFK | 2 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | VNN2^ENSG00000112303.14 | chr6:132753828:- | NIFK^ENSG00000155438.12 | chr2:121732204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18741:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18749:17535 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:132753828-chr2:121732204 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| VAMP1--AC096588.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | VAMP1^ENSG00000139190.17 | chr12:6464890:- | AC096588.1^ENSG00000249392.1 | chr4:59551254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:7642:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:49233:19076 | . | NO_LDAS | 0.0068 | GT | 1.5301 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:6464890-chr4:59551254 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| UTP25--TSPAN1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | UTP25^ENSG00000117597.18 | chr1:209854579:+ | TSPAN1^ENSG00000117472.10 | chr1:46184594:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:37890:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:31669:22397 | . | NO_LDAS | 0.0068 | GC | 1.8062 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr1:163.64Mb]""]" | chr1:209854579-chr1:46184594 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| UBE2L3--PI4KAP2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | UBE2L3^ENSG00000185651.15 | chr22:21567771:+ | PI4KAP2^ENSG00000183506.17 | chr22:21492094:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1324:6995:9001,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:42405:25129 | . | YES_LDAS | 0.0068 | GT | 1.6895 | AG | 1.9656 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr22:0.03Mb]"",""LOCAL_INVERSION:+:-:[31914]""]" | chr22:21567771-chr22:21492094 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| U62317.3--RMI1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | U62317.3^ENSG00000273272.2 | chr22:50541456:+ | RMI1^ENSG00000178966.17 | chr9:83999709:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2130:44840:2415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:25230:14354 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr22--chr9]""]" | chr22:50541456-chr9:83999709 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| TYW1B--CALN1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TYW1B^ENSG00000277149.5 | chr7:72616672:- | CALN1^ENSG00000183166.11 | chr7:72278810:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1220:8184:5652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2185:43052:23139 | . | YES_LDAS | 0.0068 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.11Mb]""]" | chr7:72616672-chr7:72278810 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| TSKU--ACER3 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TSKU^ENSG00000182704.8 | chr11:76783404:+ | ACER3^ENSG00000078124.13 | chr11:76926557:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:41693:5484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2329:9729:10682 | . | YES_LDAS | 0.0068 | GT | 1.8323 | AG | 1.7819 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[62706]""]" | chr11:76783404-chr11:76926557 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| TRHDE--RBBP7 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | TRHDE^ENSG00000072657.9 | chr12:72272638:+ | RBBP7^ENSG00000102054.18 | chrX:16844626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:46498:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:24243:24555 | . | NO_LDAS | 0.0068 | GT | 1.1589 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:72272638-chrX:16844626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TMEM141--NUDT16L2P | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM141^ENSG00000244187.8 | chr9:136792358:+ | NUDT16L2P^ENSG00000246082.2 | chr3:131361917:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:136792358-chr3:131361917 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TMEM141--AC018445.3 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM141^ENSG00000244187.8 | chr9:136792358:+ | AC018445.3^ENSG00000279637.1 | chr18:79421494:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chr18]""]" | chr9:136792358-chr18:79421494 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| TMCO2--HKDC1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TMCO2^ENSG00000188800.6 | chr1:40247448:+ | HKDC1^ENSG00000156510.13 | chr10:69232764:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:45277:11972,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:27818:19875 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:40247448-chr10:69232764 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| TCP10L--URB1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TCP10L^ENSG00000242220.9 | chr21:32567941:- | URB1^ENSG00000142207.7 | chr21:32385684:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1359:32996:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1456:34711:22425 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr21:0.10Mb]""]" | chr21:32567941-chr21:32385684 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| TBCE--GGPS1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TBCE^ENSG00000284770.2 | chr1:235380149:+ | GGPS1^ENSG00000152904.11 | chr1:235335242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:8022:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1488:6453:20449 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.7465 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22828]""]" | chr1:235380149-chr1:235335242 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| TBC1D13--SMIM19 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | TBC1D13^ENSG00000107021.16 | chr9:128806311:+ | SMIM19^ENSG00000176209.12 | chr8:42546469:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1305:38060:13289,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:12755:2695 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:128806311-chr8:42546469 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SYNJ2BP--TRMT11 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SYNJ2BP^ENSG00000213463.5 | chr14:70372555:- | TRMT11^ENSG00000066651.20 | chr6:125986531:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44581:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44597:6563 | . | NO_LDAS | 0.0068 | GT | 1.5058 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:70372555-chr6:125986531 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| SYCE1L--AC009139.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SYCE1L^ENSG00000205078.6 | chr16:77212369:+ | AC009139.1^ENSG00000260922.2 | chr16:77289276:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:46474:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2254:32753:3620 | . | YES_LDAS | 0.0068 | GT | 1.7232 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21662]""]" | chr16:77212369-chr16:77289276 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| SNX11--CBX1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | SNX11^ENSG00000002919.15 | chr17:48121565:+ | CBX1^ENSG00000108468.15 | chr17:48071579:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1454:40722:17450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2249:17285:23490 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_INVERSION:+:-:[1879]""]" | chr17:48121565-chr17:48071579 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| SLC39A3--DIRAS1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SLC39A3^ENSG00000141873.11 | chr19:2737048:- | DIRAS1^ENSG00000176490.5 | chr19:2717875:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:17560:12812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:4115:14270 | . | YES_LDAS | 0.0068 | GT | 1.6895 | AG | 1.5058 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[10832]""]" | chr19:2737048-chr19:2717875 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| SERBP1--TMED5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | SERBP1^ENSG00000142864.15 | chr1:67426135:- | TMED5^ENSG00000117500.13 | chr1:93154888:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2486:30860:4461,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:32276:24709 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:25.72Mb]""]" | chr1:67426135-chr1:93154888 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| RPL12P31--RPL12P35 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPL12P31^ENSG00000241228.1 | chr11:35997632:- | RPL12P35^ENSG00000243007.1 | chr15:72379652:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:1607:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:18070:14480 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:35997632-chr15:72379652 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| RAD51B--CEP170P1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | RAD51B^ENSG00000182185.18 | chr14:67887204:+ | CEP170P1^ENSG00000154608.14 | chr4:118493552:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1107:6161:17535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:29194:19146 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:67887204-chr4:118493552 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| PSPC1--ZMYM5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PSPC1^ENSG00000121390.19 | chr13:19772242:- | ZMYM5^ENSG00000132950.19 | chr13:19835689:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:44961:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2116:12302:12084 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9899 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr13:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[40463]""]" | chr13:19772242-chr13:19835689 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| PSD--LINC00363 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PSD^ENSG00000059915.17 | chr10:102402916:- | LINC00363^ENSG00000232849.2 | chr13:93032974:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1315:51773:2065,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1315:51781:2051 | . | NO_LDAS | 0.0068 | GT | 1.2366 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr13]""]" | chr10:102402916-chr13:93032974 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| PRDX6-AS1--TNFSF4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173460378:- | TNFSF4^ENSG00000117586.11 | chr1:173188569:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:45204:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:46361:4153 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173460378-chr1:173188569 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| PPIH--DESI1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PPIH^ENSG00000171960.12 | chr1:42663543:+ | DESI1^ENSG00000100418.8 | chr22:41604153:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1104:31588:18529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31289:15937 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:42663543-chr22:41604153 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| PITPNM3--KIAA0753 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | PITPNM3^ENSG00000091622.16 | chr17:6525356:- | KIAA0753^ENSG00000198920.11 | chr17:6590630:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:22811:8679,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:14842:12812 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.6402 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21592]""]" | chr17:6525356-chr17:6590630 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| PHBP11--KLK5 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PHBP11^ENSG00000227621.1 | chr1:223856813:- | KLK5^ENSG00000167754.13 | chr19:50952913:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1126:19219:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:27446:3676 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:223856813-chr19:50952913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| PARVB--DKKL1P1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | PARVB^ENSG00000188677.15 | chr22:44094017:+ | DKKL1P1^ENSG00000215546.2 | chr20:31274402:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1249:19518:27469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:2650:4727 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr22--chr20]""]" | chr22:44094017-chr20:31274402 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| PABPC1P3--PABPC1P12 | 2 | 0 | 0.29 | 0.0 | INCL_NON_REF_SPLICE | PABPC1P3^ENSG00000230673.3 | chrX:74583103:- | PABPC1P12^ENSG00000225638.1 | chr10:38638030:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2436:30520:24246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:16573:5162 | . | NO_LDAS | 0.001 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:74583103-chr10:38638030 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| OPN3--CD47 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | OPN3^ENSG00000054277.14 | chr1:241614043:- | CD47^ENSG00000196776.17 | chr3:108051970:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1441:38772:8188,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48149:21150 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:241614043-chr3:108051970 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| NSFP1--LRRC37A3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NSFP1^ENSG00000260075.1 | chr17:46487140:+ | LRRC37A3^ENSG00000176809.10 | chr17:64892600:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2116:32656:20827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:13895:8034 | . | YES_LDAS | 0.0068 | GT | 1.6729 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr17:18.37Mb]""]" | chr17:46487140-chr17:64892600 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| NHLRC2--LHX2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NHLRC2^ENSG00000196865.4 | chr10:113855004:+ | LHX2^ENSG00000106689.11 | chr9:124015276:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2304:22600:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:49831:21290 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr9]""]" | chr10:113855004-chr9:124015276 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| NGDN--THTPA | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | NGDN^ENSG00000129460.16 | chr14:23477560:+ | THTPA^ENSG00000259431.6 | chr14:23558695:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1202:23248:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:27616:18936 | . | YES_LDAS | 0.0068 | GT | 1.5329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[46126]""]" | chr14:23477560-chr14:23558695 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| NEDD8--SCN8A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | NEDD8^ENSG00000129559.13 | chr14:24218133:- | SCN8A^ENSG00000196876.18 | chr12:51689982:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:33101:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:35738:5176 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:24218133-chr12:51689982 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| MUC20--SMBD1P | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MUC20^ENSG00000176945.17 | chr3:195729739:+ | SMBD1P^ENSG00000283426.1 | chr3:195708747:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:4317:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:44087:22271 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9241]""]" | chr3:195729739-chr3:195708747 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| MRPS28--AC036214.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MRPS28^ENSG00000147586.10 | chr8:80002999:- | AC036214.1^ENSG00000249328.3 | chr8:79830581:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1111:30860:15138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1482:31079:25886 | . | YES_LDAS | 0.0068 | GT | 1.4295 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[46958]""]" | chr8:80002999-chr8:79830581 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| MIR17HG--RPF1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | MIR17HG^ENSG00000215417.13 | chr13:91351052:+ | RPF1^ENSG00000117133.11 | chr1:84482958:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:6873:18319,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2309:21225:23560 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:91351052-chr1:84482958 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| MGST1--AC007529.2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MGST1^ENSG00000008394.13 | chr12:16383604:+ | AC007529.2^ENSG00000283240.1 | chr12:16661766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2224:36289:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:13895:21234 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.6895 | "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]" | chr12:16383604-chr12:16661766 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| MFSD1--IQCJ | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MFSD1^ENSG00000118855.21 | chr3:158827337:+ | IQCJ^ENSG00000214216.11 | chr3:159245843:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:50673:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1463:15335:13555 | . | YES_LDAS | 0.0068 | GT | 1.8062 | AG | 1.4716 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.13Mb]""]" | chr3:158827337-chr3:159245843 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| MCMDC2--CSPP1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | MCMDC2^ENSG00000178460.18 | chr8:66905335:+ | CSPP1^ENSG00000104218.16 | chr8:67074243:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1115:43723:8693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:3152:22803 | . | YES_LDAS | 0.0068 | GT | 1.8323 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr8:0.14Mb]""]" | chr8:66905335-chr8:67074243 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| LINC02802--AC245060.4 | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | LINC02802^ENSG00000232527.8 | chr1:144250225:- | AC245060.4^ENSG00000272779.1 | chr22:22303224:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:13248:27960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2282:47016:6325 | . | YES_LDAS | 0.0023 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:144250225-chr22:22303224 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC02246--NIFK | 2 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC02246^ENSG00000281903.2 | chr21:14902899:- | NIFK^ENSG00000155438.12 | chr2:121732204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18741:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18749:17535 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr21--chr2]""]" | chr21:14902899-chr2:121732204 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LINC02093--MOSPD1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | LINC02093^ENSG00000234634.2 | chr17:13301119:- | MOSPD1^ENSG00000101928.13 | chrX:134891640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1333:48699:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:31871:20029 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:13301119-chrX:134891640 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LIN7C--MTRNR2L12 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LIN7C^ENSG00000148943.12 | chr11:27498745:- | MTRNR2L12^ENSG00000269028.3 | chr3:96617452:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2183:17439:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:12067:9267 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:27498745-chr3:96617452 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| LEPROTL1--SMG1P1 | 2 | 0 | 0.67 | 0.0 | ONLY_REF_SPLICE | LEPROTL1^ENSG00000104660.19 | chr8:30104991:+ | SMG1P1^ENSG00000237296.9 | chr16:22451620:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:36944:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:26945:11355 | . | YES_LDAS | 0.0023 | GC | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:30104991-chr16:22451620 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| KIF20B--DMGDH | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | KIF20B^ENSG00000138182.15 | chr10:89762835:+ | DMGDH^ENSG00000132837.15 | chr5:79021360:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:43238:6423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:31054:24723 | . | NO_LDAS | 0.0068 | GT | 1.4295 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:89762835-chr5:79021360 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| KCNMB2-AS1--GLDN | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | KCNMB2-AS1^ENSG00000237978.6 | chr3:178860294:- | GLDN^ENSG00000186417.14 | chr15:51377449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1284:13920:10430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:19769:22971 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr15]""]" | chr3:178860294-chr15:51377449 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| IARS1--AP002495.1 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | IARS1^ENSG00000196305.18 | chr9:92270992:- | AP002495.1^ENSG00000254469.8 | chr11:71865747:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2283:45495:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:20570:2023 | . | NO_LDAS | 0.0068 | GC | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:92270992-chr11:71865747 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| HTR7--LINC02653 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HTR7^ENSG00000148680.16 | chr10:90748839:- | LINC02653^ENSG00000236373.2 | chr10:90543450:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:38206:24302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44476:19945 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.11Mb]""]" | chr10:90748839-chr10:90543450 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| HTR7--LINC02653 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HTR7^ENSG00000148680.16 | chr10:90748834:- | LINC02653^ENSG00000236373.2 | chr10:90543450:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2273:32227:21570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2351:5708:5484 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.11Mb]""]" | chr10:90748834-chr10:90543450 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| HNRNPKP3--CACNB2 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPKP3^ENSG00000251557.2 | chr11:43261684:- | CACNB2^ENSG00000165995.22 | chr10:18541050:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1177:36038:3256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:36717:7404 | . | NO_LDAS | 0.0068 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr10]""]" | chr11:43261684-chr10:18541050 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| HIGD1A--HIGD1AP4 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | HIGD1A^ENSG00000181061.14 | chr3:42785252:- | HIGD1AP4^ENSG00000233299.1 | chr2:223398338:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:8629:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:47590:3536 | . | YES_LDAS | 0.0068 | GT | 1.9086 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:42785252-chr2:223398338 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| HERC2P10--GOLGA8UP | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | HERC2P10^ENSG00000259845.1 | chr15:30836910:+ | GOLGA8UP^ENSG00000103832.10 | chr15:30793291:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:5077:26867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:39913:12014 | . | YES_LDAS | 0.0068 | GT | 1.7968 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13412]""]" | chr15:30836910-chr15:30793291 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| GTF2IP20--GTF2IP1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | GTF2IP20^ENSG00000272645.3 | chr1:223988045:- | GTF2IP1^ENSG00000277053.4 | chr7:75210599:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1104:18822:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:41539:27581 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:223988045-chr7:75210599 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| GNLY--SEC22B | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | GNLY^ENSG00000115523.17 | chr2:85696682:+ | SEC22B^ENSG00000265808.4 | chr1:120157192:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1185:31532:19468,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:19267:15657 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:85696682-chr1:120157192 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| FGGY--C11orf80 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | FGGY^ENSG00000172456.18 | chr1:59346398:+ | C11orf80^ENSG00000173715.18 | chr11:66815758:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1251:32163:1280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2441:3023:8539 | . | NO_LDAS | 0.0068 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:59346398-chr11:66815758 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| FBXO25--AC240565.1 | 2 | 0 | 0.38 | 0.0 | ONLY_REF_SPLICE | FBXO25^ENSG00000147364.17 | chr8:435707:+ | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1497:35358:13597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2436:28894:13135 | . | YES_LDAS | 0.0013 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:435707-chr17:106864 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| ESRRB--AC016526.2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ESRRB^ENSG00000119715.15 | chr14:76310916:+ | AC016526.2^ENSG00000258454.1 | chr14:76252051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2371:23523:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:23045:25592 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[47238]""]" | chr14:76310916-chr14:76252051 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| EIF3C--ZBTB12 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EIF3C^ENSG00000184110.15 | chr16:28714928:+ | ZBTB12^ENSG00000204366.4 | chr6:31900714:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1186:20651:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:32697:14340 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:28714928-chr6:31900714 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| DYRK4--AKAP3 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | DYRK4^ENSG00000010219.13 | chr12:4605086:+ | AKAP3^ENSG00000111254.8 | chr12:4638196:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:45762:5050,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:45770:5064 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_INVERSION:+:-:[206]""]" | chr12:4605086-chr12:4638196 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| DENND6B--CDC14A | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DENND6B^ENSG00000205593.12 | chr22:50316025:- | CDC14A^ENSG00000079335.20 | chr1:100352508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1286:44516:12084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:23636:19440 | . | NO_LDAS | 0.0068 | GT | 1.9656 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:50316025-chr1:100352508 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| DCUN1D1--ZNF649 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | DCUN1D1^ENSG00000043093.15 | chr3:182944846:- | ZNF649^ENSG00000198093.11 | chr19:51896864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1386:39444:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1289:35706:22411 | . | NO_LDAS | 0.0068 | AT | 1.7232 | AC | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr19]""]" | chr3:182944846-chr19:51896864 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| CNTNAP3C--BX005040.4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61104578:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:17673:3844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:47356:24737 | . | YES_LDAS | 0.0068 | GT | 1.8295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61104578 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CLN3--HMGB1P5 | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLN3^ENSG00000188603.22 | chr16:28475958:- | HMGB1P5^ENSG00000132967.9 | chr3:22382350:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:21864:4041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2105:20901:21150 | . | NO_LDAS | 0.0034 | GC | 1.6402 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:28475958-chr3:22382350 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| CFLAR-AS1--NIFK | 2 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CFLAR-AS1^ENSG00000226312.7 | chr2:201147743:- | NIFK^ENSG00000155438.12 | chr2:121732204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18741:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18749:17535 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr2:79.40Mb]""]" | chr2:201147743-chr2:121732204 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CDKAL1--E2F3 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CDKAL1^ENSG00000145996.11 | chr6:20548705:+ | E2F3^ENSG00000112242.15 | chr6:20479846:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:6267:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:40447:17086 | . | YES_LDAS | 0.0068 | GT | 1.7968 | AG | 1.7819 | "[""DEEPEST2019"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[40743]""]" | chr6:20548705-chr6:20479846 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| CD83--AL009177.1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CD83^ENSG00000112149.10 | chr6:14118065:+ | AL009177.1^ENSG00000286277.1 | chr6:14498057:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1279:16848:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:46765:27105 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:0.29Mb]""]" | chr6:14118065-chr6:14498057 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| CCNYL4--ZNF37A | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | CCNYL4^ENSG00000224761.4 | chr10:38177975:+ | ZNF37A^ENSG00000075407.18 | chr10:38114755:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1340:17819:21612,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:31022:26741 | . | YES_LDAS | 0.0068 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14355]""]" | chr10:38177975-chr10:38114755 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| C20orf203--NIFK | 2 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | C20orf203^ENSG00000198547.10 | chr20:32640566:- | NIFK^ENSG00000155438.12 | chr2:121732204:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18741:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:18749:17535 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr20--chr2]""]" | chr20:32640566-chr2:121732204 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| BX005040.4--CNTNAP3C | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BX005040.4^ENSG00000283541.1 | chr9:61113783:- | CNTNAP3C^ENSG00000283378.1 | chr9:61425702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2239:39735:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:46522:24330 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61113783-chr9:61425702 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| BICD2--ZNF675 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BICD2^ENSG00000185963.14 | chr9:92764505:- | ZNF675^ENSG00000197372.10 | chr19:23534317:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2181:19801:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:32810:29221 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:92764505-chr19:23534317 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| BICD2--AL136981.3 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | BICD2^ENSG00000185963.14 | chr9:92764505:- | AL136981.3^ENSG00000288062.1 | chr9:92823307:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1475:43214:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2284:28134:26334 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr9:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[40598]""]" | chr9:92764505-chr9:92823307 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| BCAP29--SLC26A4 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | BCAP29^ENSG00000075790.12 | chr7:107613432:+ | SLC26A4^ENSG00000091137.14 | chr7:107661639:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:29234:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1315:24510:1617 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[31658]""]" | chr7:107613432-chr7:107661639 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| B3GALT5--IGSF5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | B3GALT5^ENSG00000183778.17 | chr21:39613067:+ | IGSF5^ENSG00000183067.5 | chr21:39765535:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:17576:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:45422:22481 | . | YES_LDAS | 0.0068 | GT | 1.5329 | AG | 1.7056 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.07Mb]"",""NEIGHBORS[72270]""]" | chr21:39613067-chr21:39765535 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| ATXN2--CSTF1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ATXN2^ENSG00000204842.18 | chr12:111597916:- | CSTF1^ENSG00000101138.12 | chr20:56397207:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:44476:28352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:35682:4909 | . | YES_LDAS | 0.0068 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:111597916-chr20:56397207 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| ARMC6--SLC25A42 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | ARMC6^ENSG00000105676.14 | chr19:19057658:+ | SLC25A42^ENSG00000181035.14 | chr19:19096091:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:25286:14564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:47550:9351 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS[3683]""]" | chr19:19057658-chr19:19096091 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| APBB3--TKFC | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | APBB3^ENSG00000113108.20 | chr5:140561018:- | TKFC^ENSG00000149476.16 | chr11:61342461:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1311:20958:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:32956:20113 | . | NO_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:140561018-chr11:61342461 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AP003108.2--PPP1R32 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61438113:+ | PPP1R32^ENSG00000162148.11 | chr11:61484688:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2133:44969:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2298:43764:19076 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61438113-chr11:61484688 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AP003108.2--PPP1R32 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AP003108.2^ENSG00000256591.5 | chr11:61430182:+ | PPP1R32^ENSG00000162148.11 | chr11:61481782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2306:10716:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:34331:24989 | . | YES_LDAS | 0.0068 | GT | 1.8256 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]" | chr11:61430182-chr11:61481782 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| ANAPC1--AC092651.1 | 2 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | ANAPC1^ENSG00000153107.13 | chr2:111815370:- | AC092651.1^ENSG00000266931.2 | chr2:87055800:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1107:9179:17829,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:11922:20169 | . | YES_LDAS | 0.0011 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr2:24.54Mb]""]" | chr2:111815370-chr2:87055800 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AL670729.1--BEND6 | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AL670729.1^ENSG00000270094.1 | chr1:228395806:+ | BEND6^ENSG00000151917.18 | chr6:56992380:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:14688:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:5409:24639 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:228395806-chr6:56992380 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AL139023.1--TBCK | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AL139023.1^ENSG00000257869.1 | chr14:28318183:+ | TBCK^ENSG00000145348.17 | chr4:106116378:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:21799:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:10247:2387 | . | YES_LDAS | 0.0068 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr4]""]" | chr14:28318183-chr4:106116378 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AKR1C1--AKR1E2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AKR1C1^ENSG00000187134.14 | chr10:4972749:+ | AKR1E2^ENSG00000165568.18 | chr10:4830675:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1233:29145:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:25602:28898 | . | YES_LDAS | 0.0068 | GT | 1.7819 | AG | 1.9899 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.12Mb]""]" | chr10:4972749-chr10:4830675 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 2 | ||||||
| AGBL5--ATRAID | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AGBL5^ENSG00000084693.16 | chr2:27051950:+ | ATRAID^ENSG00000138085.17 | chr2:27215321:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14583:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14599:11832 | . | NO_LDAS | 0.0068 | GT | 1.4256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.14Mb]""]" | chr2:27051950-chr2:27215321 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| AF064860.1--IGSF5 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AF064860.1^ENSG00000225330.1 | chr21:39630490:+ | IGSF5^ENSG00000183067.5 | chr21:39765535:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1492:24024:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:20934:20393 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr21:0.02Mb]"",""NEIGHBORS[19322]""]" | chr21:39630490-chr21:39765535 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC138150.1--RLF | 2 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC138150.1^ENSG00000224505.2 | chr17:45150876:- | RLF^ENSG00000117000.9 | chr1:40236512:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2488:47283:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2488:47291:8258 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:45150876-chr1:40236512 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 2 | |||||||
| AC104383.1--GALNT18 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC104383.1^ENSG00000286959.1 | chr11:11811462:- | GALNT18^ENSG00000110328.6 | chr11:11448936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2476:21338:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:44807:2107 | . | YES_LDAS | 0.0068 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.16Mb]""]" | chr11:11811462-chr11:11448936 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC099654.11--AL627309.5 | 2 | 0 | 0.4 | 0.0 | ONLY_REF_SPLICE | AC099654.11^ENSG00000286436.1 | chr7:57148471:+ | AL627309.5^ENSG00000241860.7 | chr1:173862:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1206:46895:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:31386:26082 | . | NO_LDAS | 0.0014 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:57148471-chr1:173862 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC092032.3--PMS2CL | 2 | 0 | 2.0 | 0.0 | INCL_NON_REF_SPLICE | AC092032.3^ENSG00000288633.1 | chr7:4996798:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1311:26912:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:45293:2892 | . | YES_LDAS | 0.0068 | GT | 1.5546 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.71Mb]""]" | chr7:4996798-chr7:6731897 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC091117.2--C1orf112 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC091117.2^ENSG00000259418.1 | chr15:45042367:- | C1orf112^ENSG00000000460.17 | chr1:169827051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2345:7723:19286,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:15077:5680 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:45042367-chr1:169827051 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC079781.4--ENPP7P3 | 2 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | AC079781.4^ENSG00000284627.1 | chr7:97928082:- | ENPP7P3^ENSG00000248618.1 | chr3:130167943:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:23652:25101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2337:13596:27273 | . | YES_LDAS | 0.0008 | GT | 1.4566 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:97928082-chr3:130167943 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| AC026765.3--CBFA2T2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC026765.3^ENSG00000257817.2 | chr12:114748210:+ | CBFA2T2^ENSG00000078699.22 | chr20:33640341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2406:5725:19020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:28401:8300 | . | YES_LDAS | 0.0068 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:114748210-chr20:33640341 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC021851.1--NUP35 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183182680:+ | NUP35^ENSG00000163002.13 | chr2:183151508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:48213:15685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:25302:16806 | . | YES_LDAS | 0.0068 | GT | 1.8062 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183182680-chr2:183151508 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 2 | |||
| AC005357.2--CCNYL1 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC005357.2^ENSG00000267623.3 | chr19:27970524:+ | CCNYL1^ENSG00000163249.13 | chr2:207724800:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:19923:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:4827:22957 | . | NO_LDAS | 0.0068 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:27970524-chr2:207724800 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 2 | ||||||
| AC004951.3--AC004951.2 | 2 | 0 | 2.0 | 0.0 | ONLY_REF_SPLICE | AC004951.3^ENSG00000241057.2 | chr7:43972630:- | AC004951.2^ENSG00000239556.4 | chr7:43988247:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1149:49904:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:22107:13877 | . | YES_LDAS | 0.0068 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11672]""]" | chr7:43972630-chr7:43988247 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| MIR4713HG--GLDN | 2 | 1 | 2.0 | 0.06 | ONLY_REF_SPLICE | MIR4713HG^ENSG00000259240.1 | chr15:51037681:+ | GLDN^ENSG00000186417.14 | chr15:51383436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1216:14802:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2258:22430:1603 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586 | NO_LDAS | 0.007 | GT | 1.9656 | AG | 1.9219 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]" | chr15:51037681-chr15:51383436 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| MED20--USP49 | 2 | 1 | 2.0 | 0.67 | INCL_NON_REF_SPLICE | MED20^ENSG00000124641.16 | chr6:41907016:- | USP49^ENSG00000164663.14 | chr6:41871637:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1171:35844:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2440:23256:23574 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:6113:17086 | YES_LDAS | 0.0091 | GT | 1.5656 | AG | 1.4295 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[9993]""]" | chr6:41907016-chr6:41871637 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 3 | |||||||
| LINC00511--SLC39A11 | 2 | 1 | 2.0 | 1.0 | ONLY_REF_SPLICE | LINC00511^ENSG00000227036.8 | chr17:72592203:- | SLC39A11^ENSG00000133195.11 | chr17:72649268:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:30771:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:7788:21444 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:3136:22747 | YES_LDAS | 0.0102 | GT | 1.8892 | AG | 1.9086 | "[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]" | chr17:72592203-chr17:72649268 | False | 0 | Read | count | too | low: | 3 | < | 8 | FAIL | 3 | |||
| CMC2--ARLNC1 | 2 | 2 | 2.0 | 1.5 | ONLY_REF_SPLICE | CMC2^ENSG00000103121.9 | chr16:80997314:- | ARLNC1^ENSG00000260896.6 | chr16:80840222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:18118:24457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:19178:19875 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1171:19793:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1233:10700:20715 | YES_LDAS | 0.0119 | GT | 1.7232 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr16:0.07Mb]"",""NEIGHBORS[73766]""]" | chr16:80997314-chr16:80840222 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 | |||||||
| AC005993.1--RGS6 | 2 | 2 | 2.0 | 0.48 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71916030:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2109:21136:18613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1289:13321:9337 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2226:3904:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:14713:4377 | YES_LDAS | 0.0084 | GT | 1.6402 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71916030-chr14:72352095 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| AC005993.1--RGS6 | 2 | 2 | 2.0 | 0.48 | ONLY_REF_SPLICE | AC005993.1^ENSG00000266869.2 | chr14:71908430:+ | RGS6^ENSG00000182732.18 | chr14:72352095:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2151:45576:12070,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:7423:14676 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2226:3904:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:14713:4377 | YES_LDAS | 0.0084 | GT | 1.8892 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]" | chr14:71908430-chr14:72352095 | False | 0 | Read | count | too | low: | 4 | < | 8 | FAIL | 4 | |||
| WASH5P--WASH6P | 2 | 3 | 2.0 | 0.67 | ONLY_REF_SPLICE | WASH5P^ENSG00000282458.1 | chr19:66346:- | WASH6P^ENSG00000182484.15 | chrX:156021999:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2318:29954:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2321:20772:25409 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:32478:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1221:47793:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:11541:7292 | YES_LDAS | 0.0091 | GT | 1.9656 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chrX]""]" | chr19:66346-chrX:156021999 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 5 | |||||||
| ZZZ3--MIGA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZZZ3^ENSG00000036549.13 | chr1:77683262:- | MIGA1^ENSG00000180488.15 | chr1:77843307:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1441:37890:17422 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr1:0.10Mb]"",""LOCAL_INVERSION:-:+:[96205]""]" | chr1:77683262-chr1:77843307 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZSWIM5--NUDT12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZSWIM5^ENSG00000162415.7 | chr1:45017622:- | NUDT12^ENSG00000112874.10 | chr5:103560254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2476:1849:27441 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:45017622-chr5:103560254 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZSWIM4--ADGRV1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZSWIM4^ENSG00000132003.9 | chr19:13830809:+ | ADGRV1^ENSG00000164199.18 | chr5:90810404:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:19785:17478 | . | NO_LDAS | 0.0017 | GC | 1.5329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:13830809-chr5:90810404 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNRD2--SLC50A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNRD2^ENSG00000173465.8 | chr11:65570970:+ | SLC50A1^ENSG00000169241.19 | chr1:155137561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1406:43578:13289 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:65570970-chr1:155137561 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNHIT6--LMO4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNHIT6^ENSG00000117174.11 | chr1:85677236:- | LMO4^ENSG00000143013.13 | chr1:87339536:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2218:10247:3200 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:1.62Mb]""]" | chr1:85677236-chr1:87339536 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF852--NTRK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF852^ENSG00000178917.17 | chr3:44499894:- | NTRK1^ENSG00000198400.13 | chr1:156865615:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:32033:1897 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:44499894-chr1:156865615 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF814--GLB1L2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF814^ENSG00000204514.10 | chr19:57859367:- | GLB1L2^ENSG00000149328.15 | chr11:134375713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2477:6663:25970 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:57859367-chr11:134375713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF790-AS1--METTL2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF790-AS1^ENSG00000267254.7 | chr19:36812606:+ | METTL2B^ENSG00000165055.16 | chr7:128500903:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1259:11371:10893 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:36812606-chr7:128500903 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF776--ZNF552 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF776^ENSG00000152443.13 | chr19:57756998:+ | ZNF552^ENSG00000178935.5 | chr19:57813420:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1452:51886:1560 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.9656 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.05Mb]"",""LOCAL_INVERSION:+:-:[45693]""]" | chr19:57756998-chr19:57813420 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| ZNF761--AC044893.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZNF761^ENSG00000160336.16 | chr19:53449965:+ | AC044893.1^ENSG00000253474.2 | chr8:49224941:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2459:20456:19398 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr19--chr8]""]" | chr19:53449965-chr8:49224941 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF75D--AC234771.4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZNF75D^ENSG00000186376.15 | chrX:135341768:- | AC234771.4^ENSG00000236491.1 | chrX:135193082:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:44799:24569 | . | YES_LDAS | 0.0017 | GT | 1.8062 | AG | 1.9899 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.05Mb]"",""NEIGHBORS[54241]""]" | chrX:135341768-chrX:135193082 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZNF749--ZNF543 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF749^ENSG00000186230.7 | chr19:57435667:+ | ZNF543^ENSG00000178229.8 | chr19:57323682:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:29962:4111 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7465 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.10Mb]""]" | chr19:57435667-chr19:57323682 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| ZNF700--PLEKHA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF700^ENSG00000196757.8 | chr19:11925273:+ | PLEKHA1^ENSG00000107679.14 | chr10:122393181:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:3702:15741 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:11925273-chr10:122393181 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF665--FAM76A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF665^ENSG00000197497.11 | chr19:53191719:- | FAM76A^ENSG00000009780.16 | chr1:27732603:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1470:33853:12168 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:53191719-chr1:27732603 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| ZNF653--ECSIT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF653^ENSG00000161914.10 | chr19:11505488:- | ECSIT^ENSG00000130159.14 | chr19:11514221:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:28603:21318 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[90]""]" | chr19:11505488-chr19:11514221 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF649-AS1--ZBTB21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF649-AS1^ENSG00000268095.1 | chr19:51888126:+ | ZBTB21^ENSG00000173276.14 | chr21:41994108:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:5304:26727 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr21]""]" | chr19:51888126-chr21:41994108 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF649--ZNF577 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF649^ENSG00000198093.11 | chr19:51891074:- | ZNF577^ENSG00000161551.14 | chr19:51880404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:39816:25662 | . | YES_LDAS | 0.0034 | TT | 1.8892 | GG | 1.8295 | "[""chimerdb_pubmed"",""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[1715]""]" | chr19:51891074-chr19:51880404 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF627--LINC01844 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF627^ENSG00000198551.10 | chr19:11616837:+ | LINC01844^ENSG00000236714.3 | chr5:142756797:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:3702:11958 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:11616837-chr5:142756797 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF613--ZNF684 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF613^ENSG00000176024.18 | chr19:51944782:+ | ZNF684^ENSG00000117010.17 | chr1:40547341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:25941:29151 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:51944782-chr1:40547341 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF589--MTMR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF589^ENSG00000164048.14 | chr3:48247677:+ | MTMR2^ENSG00000087053.20 | chr11:95888261:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2360:13175:25536 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:48247677-chr11:95888261 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF573--TBL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF573^ENSG00000189144.15 | chr19:37758476:- | TBL2^ENSG00000106638.17 | chr7:73571341:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:48415:17997 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:37758476-chr7:73571341 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53486758:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53486758-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53402191:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53402191-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF525--SAXO2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ZNF525^ENSG00000203326.12 | chr19:53375896:+ | SAXO2^ENSG00000188659.9 | chr15:82283854:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193 | . | NO_LDAS | 0.0008 | GT | 1.8062 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:53375896-chr15:82283854 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF485--ZNF32-AS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF485^ENSG00000198298.13 | chr10:43609350:+ | ZNF32-AS2^ENSG00000230565.1 | chr10:43647112:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1290:9478:26166 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr10:0.03Mb]"",""NEIGHBORS[28038]""]" | chr10:43609350-chr10:43647112 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZNF484--AC025839.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF484^ENSG00000127081.14 | chr9:92855811:- | AC025839.1^ENSG00000287677.2 | chr8:141659226:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2324:24105:10360 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:92855811-chr8:141659226 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF416--ZNF192P1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | ZNF416^ENSG00000083817.9 | chr19:57572840:- | ZNF192P1^ENSG00000226314.8 | chr6:28167030:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:28013:21892 | . | NO_LDAS | 0.0007 | GT | 1.8892 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:57572840-chr6:28167030 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF416--ZKSCAN8 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | ZNF416^ENSG00000083817.9 | chr19:57572840:- | ZKSCAN8^ENSG00000198315.11 | chr6:28153670:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:28013:21892 | . | NO_LDAS | 0.0007 | GT | 1.8892 | AG | 1.3996 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:57572840-chr6:28153670 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF416--ZFYVE1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | ZNF416^ENSG00000083817.9 | chr19:57572840:- | ZFYVE1^ENSG00000165861.14 | chr14:73024409:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:28013:21892 | . | NO_LDAS | 0.0007 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:57572840-chr14:73024409 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF37A--AKR1E2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF37A^ENSG00000075407.18 | chr10:38096632:+ | AKR1E2^ENSG00000165568.18 | chr10:4830675:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:7747:14116 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr10:33.25Mb]""]" | chr10:38096632-chr10:4830675 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF354B--ZNF815P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ZNF354B^ENSG00000178338.11 | chr5:178867071:+ | ZNF815P^ENSG00000235944.8 | chr7:5840036:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2342:30092:26362 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:178867071-chr7:5840036 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF337--ZNF80 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF337^ENSG00000130684.14 | chr20:25675979:- | ZNF80^ENSG00000174255.8 | chr3:114236849:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:5320:22187 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:25675979-chr3:114236849 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| ZNF331--MAP3K12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF331^ENSG00000130844.19 | chr19:53535861:+ | MAP3K12^ENSG00000139625.13 | chr12:53481379:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:30868:2429 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr12]""]" | chr19:53535861-chr12:53481379 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF280D--AC090517.5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF280D^ENSG00000137871.21 | chr15:56689041:- | AC090517.5^ENSG00000285331.2 | chr15:56847481:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:28644:7292 | . | NO_LDAS | 0.0034 | GT | 1.6049 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[61374]""]" | chr15:56689041-chr15:56847481 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF248--C1QTNF12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF248^ENSG00000198105.16 | chr10:37858005:- | C1QTNF12^ENSG00000184163.3 | chr1:1244497:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:3443:3943 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr1]""]" | chr10:37858005-chr1:1244497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF182--RBSN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZNF182^ENSG00000147118.12 | chrX:47976127:- | RBSN^ENSG00000131381.12 | chr3:15074232:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:37462:28310 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:47976127-chr3:15074232 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZNF175--SNIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF175^ENSG00000105497.8 | chr19:51573401:+ | SNIP1^ENSG00000163877.11 | chr1:37540755:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:27123:2499 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:51573401-chr1:37540755 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZNF133--MICU2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZNF133^ENSG00000125846.15 | chr20:18288604:+ | MICU2^ENSG00000165487.14 | chr13:21566944:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1175:34662:18445 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr20--chr13]""]" | chr20:18288604-chr13:21566944 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZMAT3--KCNMB2-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZMAT3^ENSG00000172667.11 | chr3:179025068:- | KCNMB2-AS1^ENSG00000237978.6 | chr3:178749236:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1237:27535:8847 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[22769]""]" | chr3:179025068-chr3:178749236 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZFP90--RNF168 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZFP90^ENSG00000184939.16 | chr16:68558568:+ | RNF168^ENSG00000163961.4 | chr3:196503157:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2252:20424:17633 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:68558568-chr3:196503157 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZDHHC6--DNAH10OS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZDHHC6^ENSG00000023041.11 | chr10:112446699:- | DNAH10OS^ENSG00000250091.3 | chr12:123926873:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1281:50576:11285 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr12]""]" | chr10:112446699-chr12:123926873 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZDHHC17--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | ZDHHC17^ENSG00000186908.15 | chr12:76769201:+ | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1495:27559:7600 | . | YES_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:76769201-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZDHHC16--RABL2A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ZDHHC16^ENSG00000171307.19 | chr10:97452923:+ | RABL2A^ENSG00000144134.18 | chr2:113634153:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2417:46150:18557 | . | YES_LDAS | 0.0017 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:97452923-chr2:113634153 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZCCHC17--MRPL19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZCCHC17^ENSG00000121766.16 | chr1:31346657:+ | MRPL19^ENSG00000115364.14 | chr2:75655064:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:13483:5582 | . | NO_LDAS | 0.0034 | GC | 1.2729 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:31346657-chr2:75655064 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ZC3H8--IPPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ZC3H8^ENSG00000144161.13 | chr2:112250191:- | IPPK^ENSG00000127080.10 | chr9:92619565:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:27778:20225 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:112250191-chr9:92619565 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB8A--ARHGEF5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB8A^ENSG00000160062.15 | chr1:32605640:+ | ARHGEF5^ENSG00000050327.15 | chr7:144363625:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1461:38279:19328 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:32605640-chr7:144363625 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB43--TSG101 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB43^ENSG00000169155.10 | chr9:126805178:+ | TSG101^ENSG00000074319.13 | chr11:18506899:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:48205:27946 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:126805178-chr11:18506899 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ZBTB34--RALGPS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZBTB34^ENSG00000177125.5 | chr9:126880918:+ | RALGPS1^ENSG00000136828.19 | chr9:126962225:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1207:43602:18515 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[28896]""]" | chr9:126880918-chr9:126962225 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ZAN--DKK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ZAN^ENSG00000146839.19 | chr7:100790958:+ | DKK1^ENSG00000107984.10 | chr10:52314929:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2341:29679:19062 | . | NO_LDAS | 0.0034 | AT | 1.6729 | AC | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:100790958-chr10:52314929 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| Z95114.1--ANAPC7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | Z95114.1^ENSG00000279217.1 | chr22:36083066:+ | ANAPC7^ENSG00000196510.13 | chr12:110396452:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:9939:1210 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:36083066-chr12:110396452 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YWHAEP7--MRPL45 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | YWHAEP7^ENSG00000276715.4 | chr17:37874204:- | MRPL45^ENSG00000278845.5 | chr17:38298449:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:38934:20071 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr17:0.41Mb]""]" | chr17:37874204-chr17:38298449 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YTHDC2--SRFBP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | YTHDC2^ENSG00000047188.16 | chr5:113515362:+ | SRFBP1^ENSG00000151304.6 | chr5:121974196:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:21807:29697 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr5:8.37Mb]""]" | chr5:113515362-chr5:121974196 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YBX3P1--DHPS | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | YBX3P1^ENSG00000261614.1 | chr16:31569204:- | DHPS^ENSG00000095059.16 | chr19:12681794:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:35933:10164 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:31569204-chr19:12681794 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| YAF2--RYBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | YAF2^ENSG00000015153.15 | chr12:42238155:- | RYBP^ENSG00000163602.11 | chr3:72446612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:20012:26250 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:42238155-chr3:72446612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| XYLT1--LRRC27 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | XYLT1^ENSG00000103489.12 | chr16:17106918:- | LRRC27^ENSG00000148814.18 | chr10:132337608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:8896:20617 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr16--chr10]""]" | chr16:17106918-chr10:132337608 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| XYLB--SLC22A14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | XYLB^ENSG00000093217.11 | chr3:38348632:+ | SLC22A14^ENSG00000144671.10 | chr3:38306027:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:39719:3971 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28185]""]" | chr3:38348632-chr3:38306027 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| XYLB--AC006019.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | XYLB^ENSG00000093217.11 | chr3:38395563:+ | AC006019.1^ENSG00000203335.5 | chr7:154055672:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:43998:5386 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:38395563-chr7:154055672 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| XIAP--OR7H2P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | XIAP^ENSG00000101966.13 | chrX:123885774:+ | OR7H2P^ENSG00000251261.4 | chr5:101816493:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1339:24243:5554 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:123885774-chr5:101816493 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WWOX--PAEP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WWOX^ENSG00000186153.17 | chr16:78164289:+ | PAEP^ENSG00000122133.17 | chr9:135566192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:50487:6311 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:78164289-chr9:135566192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDSUB1--PCNX4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDSUB1^ENSG00000196151.11 | chr2:159236037:- | PCNX4^ENSG00000126773.13 | chr14:60114700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2130:39605:16946 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:159236037-chr14:60114700 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR61--DHRS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR61^ENSG00000140395.9 | chr15:78294946:- | DHRS4^ENSG00000157326.19 | chr14:23959902:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:45511:19861 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr14]""]" | chr15:78294946-chr14:23959902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR49--AC106895.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | WDR49^ENSG00000174776.11 | chr3:167554650:- | AC106895.2^ENSG00000251216.2 | chr4:173982968:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:17188:9309 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:167554650-chr4:173982968 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WDR44--LIFR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR44^ENSG00000131725.14 | chrX:118378452:+ | LIFR^ENSG00000113594.10 | chr5:38530666:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2285:10425:21808 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:118378452-chr5:38530666 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR41--MSH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR41^ENSG00000164253.14 | chr5:77489457:- | MSH3^ENSG00000113318.11 | chr5:80725453:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1114:31475:5246 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:3.03Mb]""]" | chr5:77489457-chr5:80725453 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR4--PKNOX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR4^ENSG00000160193.12 | chr21:42850041:- | PKNOX1^ENSG00000160199.15 | chr21:43004326:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1279:16695:7165 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr21:0.09Mb]"",""LOCAL_INVERSION:-:+:[94942]""]" | chr21:42850041-chr21:43004326 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR4--CCNG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR4^ENSG00000160193.12 | chr21:42850041:- | CCNG2^ENSG00000138764.15 | chr4:77158533:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:41871:13751 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr21--chr4]""]" | chr21:42850041-chr4:77158533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WDR20--PSEN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WDR20^ENSG00000140153.18 | chr14:102140172:+ | PSEN1^ENSG00000080815.19 | chr14:73147795:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:46895:2808 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr14:28.92Mb]""]" | chr14:102140172-chr14:73147795 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| WBP1L--WBP1LP1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WBP1L^ENSG00000166272.18 | chr10:102812954:+ | WBP1LP1^ENSG00000243661.1 | chr7:142779140:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:42817:29291 | . | NO_LDAS | 0.0011 | GT | 1.7232 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:102812954-chr7:142779140 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WBP1L--CCDC191 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | WBP1L^ENSG00000166272.18 | chr10:102812954:+ | CCDC191^ENSG00000163617.11 | chr3:114005821:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:42817:29291 | . | NO_LDAS | 0.0011 | GT | 1.7232 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:102812954-chr3:114005821 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| WASHC4--XRN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | WASHC4^ENSG00000136051.15 | chr12:105107861:+ | XRN1^ENSG00000114127.11 | chr3:142423642:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2112:23579:25115 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:105107861-chr3:142423642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VWDE--ETV1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VWDE^ENSG00000146530.14 | chr7:12403659:- | ETV1^ENSG00000006468.14 | chr7:13939246:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1280:29719:22999 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr7:1.49Mb]""]" | chr7:12403659-chr7:13939246 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VTI1B--ERGIC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VTI1B^ENSG00000100568.11 | chr14:67648726:- | ERGIC2^ENSG00000087502.18 | chr12:29341759:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:15263:21500 | . | YES_LDAS | 0.0034 | AT | 1.9086 | AC | 1.9086 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:67648726-chr12:29341759 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VSIG10L--SRP54 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VSIG10L^ENSG00000186806.5 | chr19:51337238:- | SRP54^ENSG00000100883.13 | chr14:35028088:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1222:33311:24737 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:51337238-chr14:35028088 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VRK3--KCNJ12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VRK3^ENSG00000105053.11 | chr19:49988372:- | KCNJ12^ENSG00000184185.10 | chr17:21408519:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:23903:13877 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:49988372-chr17:21408519 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VPS8--PIP5K1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VPS8^ENSG00000156931.16 | chr3:184996442:+ | PIP5K1B^ENSG00000107242.20 | chr9:68966675:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2434:28061:9477 | . | NO_LDAS | 0.0034 | AT | 1.9329 | AC | 1.7968 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:184996442-chr9:68966675 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| VPS45--PLEKHO1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS45^ENSG00000136631.15 | chr1:150110627:+ | PLEKHO1^ENSG00000023902.14 | chr1:150150912:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:8459:6100 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8892 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[3854]""]" | chr1:150110627-chr1:150150912 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| VPS37A--PLEKHA8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS37A^ENSG00000155975.10 | chr8:17298158:+ | PLEKHA8^ENSG00000106086.20 | chr7:30074071:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:42882:29347 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:17298158-chr7:30074071 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VPS33A--CYBRD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VPS33A^ENSG00000139719.11 | chr12:122241009:- | CYBRD1^ENSG00000071967.12 | chr2:171553346:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:5781:23209 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:122241009-chr2:171553346 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VEZT--FGD6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | VEZT^ENSG00000028203.18 | chr12:95217886:+ | FGD6^ENSG00000180263.14 | chr12:95094694:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:32786:8384 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9656 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_INVERSION:+:-:[264]""]" | chr12:95217886-chr12:95094694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| VAV1--AC095050.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | VAV1^ENSG00000141968.8 | chr19:6837050:+ | AC095050.1^ENSG00000248551.1 | chr4:175403087:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2424:31354:26166 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr19--chr4]""]" | chr19:6837050-chr4:175403087 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UTP20--CCDC66 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UTP20^ENSG00000120800.5 | chr12:101312276:+ | CCDC66^ENSG00000180376.17 | chr3:56615922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:31871:15881 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:101312276-chr3:56615922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UTP15--ARHGEF28 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UTP15^ENSG00000164338.10 | chr5:73580258:+ | ARHGEF28^ENSG00000214944.9 | chr5:73749837:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1421:40957:28338 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[42778]""]" | chr5:73580258-chr5:73749837 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UTP11--INTS13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UTP11^ENSG00000183520.12 | chr1:38023715:+ | INTS13^ENSG00000064102.15 | chr12:26936612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:39816:14144 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:38023715-chr12:26936612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP49--MED20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP49^ENSG00000164663.14 | chr6:41891794:- | MED20^ENSG00000124641.16 | chr6:41907287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1309:43464:17296 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9993]""]" | chr6:41891794-chr6:41907287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP49--MED20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP49^ENSG00000164663.14 | chr6:41798724:- | MED20^ENSG00000124641.16 | chr6:41907287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:19421:21528 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9993]""]" | chr6:41798724-chr6:41907287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP47--RAB19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | USP47^ENSG00000170242.19 | chr11:11842224:+ | RAB19^ENSG00000146955.11 | chr7:140427497:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:14454:19454 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr7]""]" | chr11:11842224-chr7:140427497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP45--CCNC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP45^ENSG00000123552.18 | chr6:99464604:- | CCNC^ENSG00000112237.13 | chr6:99561681:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2420:3872:8132 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20659]""]" | chr6:99464604-chr6:99561681 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| USP35--NAT9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | USP35^ENSG00000118369.13 | chr11:78210237:+ | NAT9^ENSG00000109065.12 | chr17:74773001:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2101:18305:3676 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:78210237-chr17:74773001 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| USP1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | USP1^ENSG00000162607.13 | chr1:62443319:+ | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:8702:8791 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.41Mb]""]" | chr1:62443319-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UQCRB--TEX13B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UQCRB^ENSG00000156467.10 | chr8:96231793:- | TEX13B^ENSG00000170925.3 | chrX:107982153:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:29048:16568 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chrX]""]" | chr8:96231793-chrX:107982153 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UQCR11--NDRG2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UQCR11^ENSG00000127540.12 | chr19:1605360:- | NDRG2^ENSG00000165795.23 | chr14:21024096:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:42995:4629 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:1605360-chr14:21024096 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UPK3B--PMS2P3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UPK3B^ENSG00000243566.7 | chr7:76511882:+ | PMS2P3^ENSG00000127957.18 | chr7:75514779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1273:2489:3971 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.98Mb]""]" | chr7:76511882-chr7:75514779 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UPK3B--PMS2P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UPK3B^ENSG00000243566.7 | chr7:76511811:+ | PMS2P3^ENSG00000127957.18 | chr7:75514784:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1203:38360:16918 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.98Mb]""]" | chr7:76511811-chr7:75514784 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UNC50--INIP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UNC50^ENSG00000115446.12 | chr2:98610899:+ | INIP^ENSG00000148153.14 | chr9:112686530:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2309:8410:3158 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:98610899-chr9:112686530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UNC45A--TNNT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UNC45A^ENSG00000140553.18 | chr15:90950267:+ | TNNT2^ENSG00000118194.20 | chr1:201361287:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:46223:14984 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:90950267-chr1:201361287 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ULK3--MAGEC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ULK3^ENSG00000140474.14 | chr15:74837232:- | MAGEC2^ENSG00000046774.10 | chrX:142203900:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:15748:11888 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chrX]""]" | chr15:74837232-chrX:142203900 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UIMC1--LINC02806 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UIMC1^ENSG00000087206.17 | chr5:176956005:- | LINC02806^ENSG00000238107.1 | chr1:148296767:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1367:36636:25395 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:176956005-chr1:148296767 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UGDH-AS1--PIBF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UGDH-AS1^ENSG00000249348.1 | chr4:39528338:+ | PIBF1^ENSG00000083535.16 | chr13:72998822:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:29728:20827 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr13]""]" | chr4:39528338-chr13:72998822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UCK1--COL4A2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UCK1^ENSG00000130717.13 | chr9:131529488:- | COL4A2^ENSG00000134871.19 | chr13:110449738:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2381:2019:2121 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr9--chr13]""]" | chr9:131529488-chr13:110449738 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UCHL3--LMO7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UCHL3^ENSG00000118939.18 | chr13:75569507:+ | LMO7^ENSG00000136153.20 | chr13:75713182:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:10392:18726 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""Greger_Normal"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""NEIGHBORS[14414]""]" | chr13:75569507-chr13:75713182 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| UBXN7--RNF168 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBXN7^ENSG00000163960.12 | chr3:196391813:- | RNF168^ENSG00000163961.4 | chr3:196483891:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:40625:27203 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[36353]""]" | chr3:196391813-chr3:196483891 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBL4A--SLC24A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBL4A^ENSG00000102178.13 | chrX:154484838:- | SLC24A1^ENSG00000074621.14 | chr15:65650784:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:22681:11593 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 0.971 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:154484838-chr15:65650784 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBE4B--AC092155.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE4B^ENSG00000130939.20 | chr1:10122076:+ | AC092155.1^ENSG00000226622.6 | chr2:62590577:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2137:30804:26755 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:10122076-chr2:62590577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2W--JPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2W^ENSG00000104343.21 | chr8:73878808:- | JPH1^ENSG00000104369.5 | chr8:74315620:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2384:44006:10388 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.36Mb]""]" | chr8:73878808-chr8:74315620 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2N--C1orf109 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBE2N^ENSG00000177889.10 | chr12:93411053:- | C1orf109^ENSG00000116922.14 | chr1:37689883:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:7610:1210 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:93411053-chr1:37689883 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBE2F--SLC25A45 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBE2F^ENSG00000184182.19 | chr2:237987992:+ | SLC25A45^ENSG00000162241.12 | chr11:65376060:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:51732:15307 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:237987992-chr11:65376060 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBAP1--DDTL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | UBAP1^ENSG00000165006.14 | chr9:34241434:+ | DDTL^ENSG00000099974.8 | chr22:23971202:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2141:42987:14452 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr9--chr22]""]" | chr9:34241434-chr22:23971202 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| UBAP1--CCDC171 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBAP1^ENSG00000165006.14 | chr9:34179240:+ | CCDC171^ENSG00000164989.17 | chr9:15885690:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:21087:16091 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:18.12Mb]""]" | chr9:34179240-chr9:15885690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| UBAP1--BFAR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | UBAP1^ENSG00000165006.14 | chr9:34242108:+ | BFAR^ENSG00000103429.11 | chr16:14669033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1118:30634:7572 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:34242108-chr16:14669033 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TYW1B--CALN1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | TYW1B^ENSG00000277149.5 | chr7:72616672:- | CALN1^ENSG00000183166.11 | chr7:72403442:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:24162:24667 | . | YES_LDAS | 0.0017 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.11Mb]""]" | chr7:72616672-chr7:72403442 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TYW1--PARP10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TYW1^ENSG00000198874.13 | chr7:66998954:+ | PARP10^ENSG00000178685.14 | chr8:143984203:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1252:48060:21920 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:66998954-chr8:143984203 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TYMS--SLC43A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYMS^ENSG00000176890.16 | chr18:662320:+ | SLC43A3^ENSG00000134802.18 | chr11:57410121:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51077:9267 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr18--chr11]""]" | chr18:662320-chr11:57410121 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TYMS--PARVB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TYMS^ENSG00000176890.16 | chr18:662320:+ | PARVB^ENSG00000188677.15 | chr22:44093928:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2249:36014:15180 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr18--chr22]""]" | chr18:662320-chr22:44093928 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TXNRD3--ABHD15 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TXNRD3^ENSG00000197763.20 | chr3:126633960:- | ABHD15^ENSG00000168792.5 | chr17:29562367:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:13895:6409 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:126633960-chr17:29562367 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TXLNG--F2RL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TXLNG^ENSG00000086712.13 | chrX:16793786:+ | F2RL2^ENSG00000164220.7 | chr5:76617277:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:38465:3985 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:16793786-chr5:76617277 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TUBGCP4--FKBP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TUBGCP4^ENSG00000137822.13 | chr15:43377903:+ | FKBP3^ENSG00000100442.11 | chr14:45130800:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1156:23458:2738 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr14]""]" | chr15:43377903-chr14:45130800 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TUBD1--TMTC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TUBD1^ENSG00000108423.15 | chr17:59886083:- | TMTC2^ENSG00000179104.9 | chr12:83132210:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:33716:27876 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:59886083-chr12:83132210 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTLL5--DSCR8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTLL5^ENSG00000119685.20 | chr14:75669522:+ | DSCR8^ENSG00000198054.12 | chr21:38154433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:8127:25844 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chr21]""]" | chr14:75669522-chr21:38154433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTC4--TPCN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTC4^ENSG00000243725.7 | chr1:54716019:+ | TPCN2^ENSG00000162341.18 | chr11:69079547:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:23053:9099 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:54716019-chr11:69079547 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TTC23L--LMBRD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TTC23L^ENSG00000205838.14 | chr5:34880308:+ | LMBRD2^ENSG00000164187.7 | chr5:36122961:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:16816:11775 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:1.20Mb]""]" | chr5:34880308-chr5:36122961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TTC12--LINC02495 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TTC12^ENSG00000149292.17 | chr11:113341911:+ | LINC02495^ENSG00000249896.2 | chr4:6222671:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:25116:14578 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:113341911-chr4:6222671 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TSTD2--TGFBR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSTD2^ENSG00000136925.15 | chr9:97617757:- | TGFBR1^ENSG00000106799.13 | chr9:99128855:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:5684:28926 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr9:1.47Mb]""]" | chr9:97617757-chr9:99128855 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TSPYL4--EIF1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSPYL4^ENSG00000187189.11 | chr6:116253877:- | EIF1B^ENSG00000114784.4 | chr3:40309871:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:4584:3004 | . | NO_LDAS | 0.0034 | GT | 1.585 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:116253877-chr3:40309871 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TSPAN12--PRELID3B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TSPAN12^ENSG00000106025.9 | chr7:120787989:- | PRELID3B^ENSG00000101166.16 | chr20:59037280:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1477:8079:18894 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr20]""]" | chr7:120787989-chr20:59037280 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TSNAX--DISC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSNAX^ENSG00000116918.15 | chr1:231542611:+ | DISC1^ENSG00000162946.23 | chr1:231693826:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1111:7690:27637 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""ChimerPub"",""INTRACHROMOSOMAL[chr1:0.06Mb]"",""NEIGHBORS[60266]""]" | chr1:231542611-chr1:231693826 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TSKU--ADSS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TSKU^ENSG00000182704.8 | chr11:76783404:+ | ADSS1^ENSG00000185100.11 | chr14:104735020:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:31402:9463 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:76783404-chr14:104735020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRMT61B--TNFAIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRMT61B^ENSG00000171103.11 | chr2:28861118:- | TNFAIP1^ENSG00000109079.10 | chr17:28345786:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2127:45932:10893 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:28861118-chr17:28345786 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRMT13--EXOSC9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRMT13^ENSG00000122435.10 | chr1:100144143:+ | EXOSC9^ENSG00000123737.13 | chr4:121816772:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2432:9770:9463 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:100144143-chr4:121816772 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRMT11--MRPL33 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRMT11^ENSG00000066651.20 | chr6:126013101:+ | MRPL33^ENSG00000243147.8 | chr2:27779433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1261:47760:20057 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:126013101-chr2:27779433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRMT10C--LINC01370 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRMT10C^ENSG00000174173.7 | chr3:101565068:+ | LINC01370^ENSG00000237767.2 | chr20:40009613:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1133:4552:24695 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:101565068-chr20:40009613 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRIM73--STAG3L1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | TRIM73^ENSG00000178809.11 | chr7:75405204:+ | STAG3L1^ENSG00000205583.13 | chr7:75385083:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2379:45673:19861 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[320]""]" | chr7:75405204-chr7:75385083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM67-AS1--FAM89A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM67-AS1^ENSG00000235710.6 | chr1:231186076:- | FAM89A^ENSG00000182118.8 | chr1:231020126:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:28417:5442 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr1:0.14Mb]""]" | chr1:231186076-chr1:231020126 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM55--AC084082.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM55^ENSG00000147573.17 | chr8:66127436:+ | AC084082.1^ENSG00000253190.4 | chr8:66126546:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:43254:14858 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[264]""]" | chr8:66127436-chr8:66126546 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM54--DNAJC5G | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM54^ENSG00000138100.14 | chr2:27299416:+ | DNAJC5G^ENSG00000163793.13 | chr2:27280166:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1469:28466:12868 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[930]""]" | chr2:27299416-chr2:27280166 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--RALGAPA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | RALGAPA2^ENSG00000188559.15 | chr20:20640878:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:37170:25956 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:181260001-chr20:20640878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--PDPR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | PDPR^ENSG00000090857.14 | chr16:70145677:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:16978:12000 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:181260001-chr16:70145677 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--IDH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | IDH1^ENSG00000138413.14 | chr2:208253959:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:9333:3802 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:181260001-chr2:208253959 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM52--FAM157C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM52^ENSG00000183718.5 | chr5:181260001:- | FAM157C^ENSG00000260528.5 | chr16:90137974:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:42494:20968 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:181260001-chr16:90137974 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TRIM5--PITPNB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRIM5^ENSG00000132256.19 | chr11:5665334:- | PITPNB^ENSG00000180957.18 | chr22:27894565:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:22074:17380 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr22]""]" | chr11:5665334-chr22:27894565 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRIM37--AC008798.1 | 1 | 0 | 0.09 | 0.0 | INCL_NON_REF_SPLICE | TRIM37^ENSG00000108395.14 | chr17:59061087:- | AC008798.1^ENSG00000267433.1 | chr19:29901836:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:41879:20687 | . | NO_LDAS | 0.0003 | GT | 1.7465 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:59061087-chr19:29901836 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRAPPC2L--LINC00893 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TRAPPC2L^ENSG00000167515.10 | chr16:88859972:+ | LINC00893^ENSG00000241769.7 | chrX:149533019:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1209:32850:7656 | . | NO_LDAS | 0.0017 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chrX]""]" | chr16:88859972-chrX:149533019 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TRAFD1--FAAH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TRAFD1^ENSG00000135148.12 | chr12:112141202:+ | FAAH^ENSG00000117480.16 | chr1:46411612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:48610:5078 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:112141202-chr1:46411612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPTEP2--FIRRE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPTEP2^ENSG00000244627.5 | chr22:38380370:- | FIRRE^ENSG00000213468.7 | chrX:131794466:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:39193:17016 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr22--chrX]""]" | chr22:38380370-chrX:131794466 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPTE2--CREBRF | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | TPTE2^ENSG00000132958.17 | chr13:19473914:- | CREBRF^ENSG00000164463.12 | chr5:173123080:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:31281:4209 | . | YES_LDAS | 0.0017 | GT | 1.585 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr13--chr5]""]" | chr13:19473914-chr5:173123080 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPGS2--DTNA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPGS2^ENSG00000134779.15 | chr18:36798449:- | DTNA^ENSG00000134769.22 | chr18:34827593:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2293:51223:13835 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr18:1.89Mb]""]" | chr18:36798449-chr18:34827593 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TPCN2--SMIM38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TPCN2^ENSG00000162341.18 | chr11:69081499:+ | SMIM38^ENSG00000284713.1 | chr11:69159446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:37227:24513 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[19162]""]" | chr11:69081499-chr11:69159446 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TP73--GABRD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TP73^ENSG00000078900.15 | chr1:3683180:+ | GABRD^ENSG00000187730.9 | chr1:2027577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1357:46312:21696 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr1:1.62Mb]""]" | chr1:3683180-chr1:2027577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOMM22--AC116533.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TOMM22^ENSG00000100216.6 | chr22:38682095:+ | AC116533.1^ENSG00000244398.1 | chr11:16974836:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:2610:26040 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr11]""]" | chr22:38682095-chr11:16974836 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TOM1--TP63 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TOM1^ENSG00000100284.22 | chr22:35323177:+ | TP63^ENSG00000073282.14 | chr3:189868588:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:16225:24597 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr22--chr3]""]" | chr22:35323177-chr3:189868588 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TNNI3K--FPGT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNNI3K^ENSG00000116783.15 | chr1:74370392:+ | FPGT^ENSG00000254685.7 | chr1:74204391:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:12544:17520 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1301]""]" | chr1:74370392-chr1:74204391 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| TNFRSF19--XRCC1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | TNFRSF19^ENSG00000127863.16 | chr13:23659169:+ | XRCC1^ENSG00000073050.12 | chr19:43546683:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2387:31176:1476 | . | NO_LDAS | 0.0008 | GT | 1.5329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr13--chr19]""]" | chr13:23659169-chr19:43546683 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TNFRSF10D--ZNF600 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNFRSF10D^ENSG00000173530.6 | chr8:23163786:- | ZNF600^ENSG00000189190.10 | chr19:52778907:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2413:25618:16624 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr19]""]" | chr8:23163786-chr19:52778907 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TNFAIP2--HSP90AA2P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TNFAIP2^ENSG00000185215.11 | chr14:103123483:+ | HSP90AA2P^ENSG00000224411.3 | chr11:27891033:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1189:13273:20435 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:103123483-chr11:27891033 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMTC3--SLCO1B3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMTC3^ENSG00000139324.12 | chr12:88142487:+ | SLCO1B3^ENSG00000111700.13 | chr12:20898436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1390:18143:2023 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:67.23Mb]""]" | chr12:88142487-chr12:20898436 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMTC2--GOLGA8CP | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | TMTC2^ENSG00000179104.9 | chr12:82687601:+ | GOLGA8CP^ENSG00000181984.11 | chr15:20574016:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1123:39864:14396 | . | NO_LDAS | 0.0006 | GT | 1.8256 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:82687601-chr15:20574016 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMTC2--AL161935.3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | TMTC2^ENSG00000179104.9 | chr12:82687601:+ | AL161935.3^ENSG00000286694.1 | chr10:31608790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1123:39864:14396 | . | NO_LDAS | 0.0006 | GT | 1.8256 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:82687601-chr10:31608790 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMOD4--VPS72 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMOD4^ENSG00000163157.15 | chr1:151172268:- | VPS72^ENSG00000163159.14 | chr1:151178145:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2356:24963:3915 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[20]""]" | chr1:151172268-chr1:151178145 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM79--IGFN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM79^ENSG00000163472.19 | chr1:156286473:+ | IGFN1^ENSG00000163395.17 | chr1:201201719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:10757:24148 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr1:44.90Mb]""]" | chr1:156286473-chr1:201201719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM70--ASAH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM70^ENSG00000175606.11 | chr8:73976445:+ | ASAH1^ENSG00000104763.20 | chr8:18084008:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:29275:15811 | . | YES_LDAS | 0.0034 | GC | 1.7232 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:55.89Mb]""]" | chr8:73976445-chr8:18084008 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM38B--FSD1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM38B^ENSG00000095209.12 | chr9:105694772:+ | FSD1L^ENSG00000106701.13 | chr9:105506399:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:8087:14396 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr9:0.14Mb]""]" | chr9:105694772-chr9:105506399 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM266--HMG20A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM266^ENSG00000169758.13 | chr15:76175674:+ | HMG20A^ENSG00000140382.15 | chr15:77458404:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16573:15419 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr15:1.19Mb]""]" | chr15:76175674-chr15:77458404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM252-DT--PGM5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM252-DT^ENSG00000226337.3 | chr9:68542642:+ | PGM5^ENSG00000154330.13 | chr9:68465093:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1444:3136:1196 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9975]""]" | chr9:68542642-chr9:68465093 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM248--PHLPP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM248^ENSG00000106609.16 | chr7:66948698:+ | PHLPP2^ENSG00000040199.18 | chr16:71678377:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:21282:21724 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr7--chr16]""]" | chr7:66948698-chr16:71678377 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM248--AC002351.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM248^ENSG00000106609.16 | chr7:66953369:+ | AC002351.1^ENSG00000258240.6 | chr12:110956336:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:36903:26895 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:66953369-chr12:110956336 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM238--AC020922.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM238^ENSG00000233493.4 | chr19:55383722:- | AC020922.3^ENSG00000269275.1 | chr19:55378110:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1333:49508:26811 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS[1119]""]" | chr19:55383722-chr19:55378110 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TMEM221--DPP8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM221^ENSG00000188051.7 | chr19:17436697:- | DPP8^ENSG00000074603.19 | chr15:65517144:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:10651:23434 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr19--chr15]""]" | chr19:17436697-chr15:65517144 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM201--EMG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM201^ENSG00000188807.13 | chr1:9596010:+ | EMG1^ENSG00000126749.16 | chr12:6978321:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:37939:29081 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:9596010-chr12:6978321 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM200B--DMBX1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM200B^ENSG00000253304.2 | chr1:29123856:- | DMBX1^ENSG00000197587.11 | chr1:46506999:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:25747:26124 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:17.37Mb]""]" | chr1:29123856-chr1:46506999 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM184C--PRIM2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM184C^ENSG00000164168.8 | chr4:147631505:+ | PRIM2^ENSG00000146143.19 | chr6:57507387:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:5935:19861 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:147631505-chr6:57507387 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM179B--B3GNTL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM179B^ENSG00000185475.11 | chr11:62787527:+ | B3GNTL1^ENSG00000175711.8 | chr17:83048785:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:11161:5316 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:62787527-chr17:83048785 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM177--ESR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM177^ENSG00000144120.13 | chr2:119685754:+ | ESR2^ENSG00000140009.19 | chr14:64230011:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:29598:23013 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:119685754-chr14:64230011 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM170B--TBC1D12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM170B^ENSG00000205269.6 | chr6:11538374:+ | TBC1D12^ENSG00000108239.9 | chr10:94403291:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:31200:11411 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr10]""]" | chr6:11538374-chr10:94403291 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMEM170A--CFDP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM170A^ENSG00000166822.13 | chr16:75451738:- | CFDP1^ENSG00000153774.9 | chr16:75414695:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1416:50648:29347 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[9551]""]" | chr16:75451738-chr16:75414695 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TMEM161B--PGBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM161B^ENSG00000164180.14 | chr5:88196376:- | PGBD2^ENSG00000185220.12 | chr1:248917279:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:15756:2906 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:88196376-chr1:248917279 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM14C--JAZF1-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM14C^ENSG00000111843.14 | chr6:10728727:+ | JAZF1-AS1^ENSG00000234336.7 | chr7:28242607:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:28409:22018 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:10728727-chr7:28242607 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMEM147-AS1--SBSN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMEM147-AS1^ENSG00000236144.8 | chr19:35541751:- | SBSN^ENSG00000189001.11 | chr19:35524924:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:47784:11803 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[12387]""]" | chr19:35541751-chr19:35524924 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TMEM106C--LINC00607 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMEM106C^ENSG00000134291.12 | chr12:47964423:+ | LINC00607^ENSG00000235770.6 | chr2:215701084:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:40819:20897 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:47964423-chr2:215701084 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMED9--MEF2C-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TMED9^ENSG00000184840.12 | chr5:177592654:+ | MEF2C-AS1^ENSG00000248309.7 | chr5:89075122:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:43748:8090 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:88.13Mb]""]" | chr5:177592654-chr5:89075122 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TMED4--RN7SL87P | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | TMED4^ENSG00000158604.15 | chr7:44580401:- | RN7SL87P^ENSG00000239390.3 | chr5:144140936:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:36313:19622 | . | YES_LDAS | 0.0004 | GT | 1.4256 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:44580401-chr5:144140936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMED4--RN7SL711P | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | TMED4^ENSG00000158604.15 | chr7:44580401:- | RN7SL711P^ENSG00000276047.1 | chr5:123070839:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:36313:19622 | . | YES_LDAS | 0.0004 | GT | 1.4256 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:44580401-chr5:123070839 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMED4--RN7SL597P | 1 | 0 | 0.11 | 0.0 | INCL_NON_REF_SPLICE | TMED4^ENSG00000158604.15 | chr7:44580401:- | RN7SL597P^ENSG00000244264.3 | chr13:41121933:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:36313:19622 | . | YES_LDAS | 0.0004 | GT | 1.4256 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr7--chr13]""]" | chr7:44580401-chr13:41121933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMED3--MINAR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMED3^ENSG00000166557.14 | chr15:79314005:+ | MINAR1^ENSG00000169330.9 | chr15:79463067:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2331:40253:4055 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]" | chr15:79314005-chr15:79463067 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMC5--GSDMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMC5^ENSG00000103534.17 | chr16:19460334:+ | GSDMB^ENSG00000073605.18 | chr17:39912497:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:50300:25101 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:19460334-chr17:39912497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TMBIM4--DUSP16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TMBIM4^ENSG00000155957.18 | chr12:66169855:- | DUSP16^ENSG00000111266.9 | chr12:12521463:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:33231:2177 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr12:53.57Mb]""]" | chr12:66169855-chr12:12521463 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TM2D1--L3HYPDH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TM2D1^ENSG00000162604.12 | chr1:61700934:- | L3HYPDH^ENSG00000126790.12 | chr14:59476006:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1112:50090:9772 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:61700934-chr14:59476006 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TICAM2--OR10K1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TICAM2^ENSG00000243414.6 | chr5:115580662:- | OR10K1^ENSG00000173285.4 | chr1:158467313:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:32292:11061 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:115580662-chr1:158467313 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| THUMPD3--PARPBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THUMPD3^ENSG00000134077.16 | chr3:9365072:+ | PARPBP^ENSG00000185480.12 | chr12:102151831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:12375:23364 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:9365072-chr12:102151831 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| THAP4--ROMO1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | THAP4^ENSG00000176946.12 | chr2:241633601:- | ROMO1^ENSG00000125995.16 | chr20:35699633:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1134:8669:1504 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr20]""]" | chr2:241633601-chr20:35699633 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TGFB2--LYSMD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TGFB2^ENSG00000092969.12 | chr1:218345713:+ | LYSMD1^ENSG00000163155.12 | chr1:151165206:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2213:22544:17520 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:67.18Mb]""]" | chr1:218345713-chr1:151165206 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TFIP11--DCTD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TFIP11^ENSG00000100109.17 | chr22:26512099:- | DCTD^ENSG00000129187.15 | chr4:182915575:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1284:8613:16119 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr4]""]" | chr22:26512099-chr4:182915575 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TFCP2--KIF22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TFCP2^ENSG00000135457.10 | chr12:51172695:- | KIF22^ENSG00000079616.13 | chr16:29798682:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2482:39622:26474 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr12--chr16]""]" | chr12:51172695-chr16:29798682 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TEX21P--ZNF517 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TEX21P^ENSG00000234911.2 | chr14:64353953:- | ZNF517^ENSG00000197363.9 | chr8:144802870:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1359:16250:9477 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr8]""]" | chr14:64353953-chr8:144802870 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TERT--KATNBL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TERT^ENSG00000164362.21 | chr5:1258598:- | KATNBL1^ENSG00000134152.11 | chr15:34209992:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:13742:11495 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:1258598-chr15:34209992 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TERF2IP--KANK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TERF2IP^ENSG00000166848.7 | chr16:75648038:+ | KANK1^ENSG00000107104.20 | chr9:742361:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:15958:18950 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:75648038-chr9:742361 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TENT4B--CFAP20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TENT4B^ENSG00000121274.14 | chr16:50154259:+ | CFAP20^ENSG00000070761.8 | chr16:58116951:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1320:11339:11173 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr16:7.88Mb]""]" | chr16:50154259-chr16:58116951 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRKH--VSX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TDRKH^ENSG00000182134.16 | chr1:151775392:- | VSX2^ENSG00000119614.3 | chr14:74262619:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2435:40059:25802 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:151775392-chr14:74262619 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TDRKH--ANKRD19P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TDRKH^ENSG00000182134.16 | chr1:151774413:- | ANKRD19P^ENSG00000187984.13 | chr9:92836777:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:44864:28408 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:151774413-chr9:92836777 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRD7--SLC35B1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TDRD7^ENSG00000196116.8 | chr9:97441875:+ | SLC35B1^ENSG00000121073.15 | chr17:49707068:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1420:1016:1560 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:97441875-chr17:49707068 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRD5--AXDND1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TDRD5^ENSG00000162782.16 | chr1:179669404:+ | AXDND1^ENSG00000162779.22 | chr1:179525334:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:18450:23602 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[36878]""]" | chr1:179669404-chr1:179525334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TDRD3--DIAPH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TDRD3^ENSG00000083544.16 | chr13:60397405:+ | DIAPH3^ENSG00000139734.19 | chr13:59924870:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:36305:7081 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 0.9968 | "[""GUO2018CR_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr13:0.23Mb]""]" | chr13:60397405-chr13:59924870 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TCTN3--STPG4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TCTN3^ENSG00000119977.22 | chr10:95693385:- | STPG4^ENSG00000239605.11 | chr2:47087120:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2379:36596:1112 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:95693385-chr2:47087120 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TCFL5--BUD31 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | TCFL5^ENSG00000101190.13 | chr20:62857395:- | BUD31^ENSG00000106245.11 | chr7:99417989:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1367:27648:7782 | . | NO_LDAS | 0.0017 | GT | 1.2729 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr7]""]" | chr20:62857395-chr7:99417989 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBX3--PEPD | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBX3^ENSG00000135111.16 | chr12:114672070:- | PEPD^ENSG00000124299.15 | chr19:33512776:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:11129:16105 | . | NO_LDAS | 0.0034 | GC | 0.9183 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:114672070-chr19:33512776 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBRG1--SREK1IP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBRG1^ENSG00000154144.13 | chr11:124632303:+ | SREK1IP1^ENSG00000153006.16 | chr5:64768640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:41312:3873 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:124632303-chr5:64768640 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TBCK--HSPA4L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCK^ENSG00000145348.17 | chr4:106244626:- | HSPA4L^ENSG00000164070.12 | chr4:127818325:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:5490:28814 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr4:21.47Mb]""]" | chr4:106244626-chr4:127818325 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBCEL--TECTA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCEL^ENSG00000154114.12 | chr11:121060085:+ | TECTA^ENSG00000109927.11 | chr11:121102665:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:30973:20519 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[10468]""]" | chr11:121060085-chr11:121102665 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| TBCE--GGPS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBCE^ENSG00000284770.2 | chr1:235401587:+ | GGPS1^ENSG00000152904.11 | chr1:235335242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:19308:17857 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22828]""]" | chr1:235401587-chr1:235335242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D31--AC063926.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D31^ENSG00000156787.17 | chr8:123077257:+ | AC063926.3^ENSG00000279905.1 | chr12:130430652:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2305:47396:5330 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr12]""]" | chr8:123077257-chr12:130430652 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D13--GLE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TBC1D13^ENSG00000107021.16 | chr9:128797214:+ | GLE1^ENSG00000119392.15 | chr9:128508876:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1129:40414:28997 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr9:0.24Mb]""]" | chr9:128797214-chr9:128508876 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TBC1D10C--FBXO5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TBC1D10C^ENSG00000175463.12 | chr11:67405921:+ | FBXO5^ENSG00000112029.10 | chr6:152982906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1470:2197:29585 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:67405921-chr6:152982906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TAS2R4--SEMA3A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TAS2R4^ENSG00000127364.4 | chr7:141778740:+ | SEMA3A^ENSG00000075213.11 | chr7:83959304:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1447:6064:17619 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr7:57.28Mb]""]" | chr7:141778740-chr7:83959304 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TAS2R19--NEDD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TAS2R19^ENSG00000212124.2 | chr12:11022387:- | NEDD4^ENSG00000069869.17 | chr15:55838146:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1496:26192:22215 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:11022387-chr15:55838146 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TAS2R14--PRR4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TAS2R14^ENSG00000212127.6 | chr12:11034782:- | PRR4^ENSG00000111215.12 | chr12:10848407:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:34590:9576 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr12:0.09Mb]"",""NEIGHBORS[87933]""]" | chr12:11034782-chr12:10848407 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TARDBPP4--AC012485.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TARDBPP4^ENSG00000253555.1 | chr8:63137813:- | AC012485.1^ENSG00000225057.2 | chr2:238231867:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:31726:6969 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr8--chr2]""]" | chr8:63137813-chr2:238231867 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TAF6L--FRA10AC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TAF6L^ENSG00000162227.8 | chr11:62781959:+ | FRA10AC1^ENSG00000148690.12 | chr10:93698316:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2167:17220:3452 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr10]""]" | chr11:62781959-chr10:93698316 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| TAF12--MED18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TAF12^ENSG00000120656.12 | chr1:28613247:- | MED18^ENSG00000130772.14 | chr1:28334417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:4422:1659 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr1:0.25Mb]""]" | chr1:28613247-chr1:28334417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| TADA2B--SORCS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | TADA2B^ENSG00000173011.12 | chr4:7043849:+ | SORCS2^ENSG00000184985.16 | chr4:7396288:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2298:38319:26628 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr4:0.13Mb]""]" | chr4:7043849-chr4:7396288 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| TACO1--ASMTL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | TACO1^ENSG00000136463.8 | chr17:63601363:+ | ASMTL^ENSG00000169093.16 | chrX:1432177:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2164:25674:4867 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:63601363-chrX:1432177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SYS1--DBNDD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SYS1^ENSG00000204070.10 | chr20:45365686:+ | DBNDD2^ENSG00000244274.8 | chr20:45408460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2411:15408:16231 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[29259]""]" | chr20:45365686-chr20:45408460 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SYNJ1--CRYM-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SYNJ1^ENSG00000159082.18 | chr21:32688306:- | CRYM-AS1^ENSG00000189149.12 | chr16:21338921:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2467:16598:16498 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr21--chr16]""]" | chr21:32688306-chr16:21338921 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SYNGR1--RFLNA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SYNGR1^ENSG00000100321.15 | chr22:39350109:+ | RFLNA^ENSG00000178882.15 | chr12:123973886:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:28991:22747 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:39350109-chr12:123973886 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SYN2--PPARG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SYN2^ENSG00000157152.17 | chr3:12169906:+ | PPARG^ENSG00000132170.23 | chr3:12312380:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1425:35625:7165 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8295 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.10Mb]"",""NEIGHBORS[95336]""]" | chr3:12169906-chr3:12312380 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SYN2--PPARG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SYN2^ENSG00000157152.17 | chr3:12209597:+ | PPARG^ENSG00000132170.23 | chr3:12379704:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2282:49629:12000 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.10Mb]"",""NEIGHBORS[95336]""]" | chr3:12209597-chr3:12379704 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| SURF1--NTF3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SURF1^ENSG00000148290.10 | chr9:133352694:- | NTF3^ENSG00000185652.12 | chr12:5513151:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1238:3467:28450 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:133352694-chr12:5513151 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT3H--H1-3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUPT3H^ENSG00000196284.17 | chr6:44961753:- | H1-3^ENSG00000124575.7 | chr6:26234387:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:21371:14480 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr6:18.57Mb]""]" | chr6:44961753-chr6:26234387 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT3H--BRIX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUPT3H^ENSG00000196284.17 | chr6:45020546:- | BRIX1^ENSG00000113460.13 | chr5:34922265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:35674:2878 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:45020546-chr5:34922265 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUPT20H--AL354733.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUPT20H^ENSG00000102710.20 | chr13:37059559:- | AL354733.2^ENSG00000231616.9 | chr9:83863661:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:39703:7838 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:37059559-chr9:83863661 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUMF1--FEN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUMF1^ENSG00000144455.14 | chr3:4452999:- | FEN1^ENSG00000168496.4 | chr11:61795913:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:39233:25970 | . | NO_LDAS | 0.0034 | AT | 1.9656 | AC | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:4452999-chr11:61795913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUMF1--ARFIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUMF1^ENSG00000144455.14 | chr3:4466976:- | ARFIP1^ENSG00000164144.16 | chr4:152910064:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2417:36224:10781 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:4466976-chr4:152910064 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SULT1A3--SMG1P6 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SULT1A3^ENSG00000261052.6 | chr16:30201293:+ | SMG1P6^ENSG00000254634.4 | chr16:29452206:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:51085:22621 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr16:0.75Mb]""]" | chr16:30201293-chr16:29452206 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUGT1P4--STARD8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUGT1P4^ENSG00000254483.1 | chr9:97250809:+ | STARD8^ENSG00000130052.13 | chrX:68720288:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2138:18620:1336 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:97250809-chrX:68720288 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUGT1P4--MYL6B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SUGT1P4^ENSG00000254483.1 | chr9:97246186:+ | MYL6B^ENSG00000196465.10 | chr12:56157468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:35957:20715 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:97246186-chr12:56157468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUCLG2--UGP2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | SUCLG2^ENSG00000172340.15 | chr3:67528147:- | UGP2^ENSG00000169764.16 | chr2:63887994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2389:14793:6759 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:67528147-chr2:63887994 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SUCLG2--TAFA4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SUCLG2^ENSG00000172340.15 | chr3:67609455:- | TAFA4^ENSG00000163377.16 | chr3:68753018:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:52048:15433 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr3:1.08Mb]""]" | chr3:67609455-chr3:68753018 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SUB1--NBPF15 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | SUB1^ENSG00000113387.12 | chr5:32588572:+ | NBPF15^ENSG00000266338.6 | chr1:144440513:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:14826:21444 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:32588572-chr1:144440513 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STXBP5L--IGSF11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STXBP5L^ENSG00000145087.13 | chr3:121240507:+ | IGSF11^ENSG00000144847.13 | chr3:118930275:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:34501:5778 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:1.76Mb]""]" | chr3:121240507-chr3:118930275 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STRADA--SRP9P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STRADA^ENSG00000266173.7 | chr17:63706635:- | SRP9P1^ENSG00000180581.7 | chr10:91807445:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:10223:6997 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:63706635-chr10:91807445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STPG4--S100A10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STPG4^ENSG00000239605.11 | chr2:47108388:- | S100A10^ENSG00000197747.9 | chr1:151986251:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2329:20392:27834 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:47108388-chr1:151986251 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STPG4--MICU2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | STPG4^ENSG00000239605.11 | chr2:47108388:- | MICU2^ENSG00000165487.14 | chr13:21522650:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:29946:20505 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr13]""]" | chr2:47108388-chr13:21522650 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STPG4--CAMKMT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STPG4^ENSG00000239605.11 | chr2:47108388:- | CAMKMT^ENSG00000143919.15 | chr2:44754055:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:41814:23013 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:2.27Mb]""]" | chr2:47108388-chr2:44754055 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STON1--PPP1R21 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STON1^ENSG00000243244.7 | chr2:48530829:+ | PPP1R21^ENSG00000162869.16 | chr2:48451008:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:50025:23083 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13992]""]" | chr2:48530829-chr2:48451008 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STK3--MATN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STK3^ENSG00000104375.17 | chr8:98526742:- | MATN2^ENSG00000132561.14 | chr8:97888075:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:14988:29515 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr8:0.33Mb]""]" | chr8:98526742-chr8:97888075 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STIMATE--LNCOC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STIMATE^ENSG00000213533.13 | chr3:52897291:- | LNCOC1^ENSG00000253741.2 | chr8:142708418:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:51360:5694 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:52897291-chr8:142708418 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STAT5B--OBI1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAT5B^ENSG00000173757.10 | chr17:42276248:- | OBI1^ENSG00000152193.8 | chr13:78617122:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2173:49370:17100 | . | YES_LDAS | 0.0034 | GT | 1.371 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chr13]""]" | chr17:42276248-chr13:78617122 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STARD9--AC011498.7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | STARD9^ENSG00000159433.12 | chr15:42688231:+ | AC011498.7^ENSG00000280239.1 | chr19:4450252:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:14510:28324 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:42688231-chr19:4450252 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STARD3NL--DZIP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STARD3NL^ENSG00000010270.14 | chr7:38178420:+ | DZIP3^ENSG00000198919.13 | chr3:108661877:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2188:25003:3396 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:38178420-chr3:108661877 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STAG3L1--SNX16 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | STAG3L1^ENSG00000205583.13 | chr7:75366438:+ | SNX16^ENSG00000104497.14 | chr8:81839891:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:35277:8609 | . | YES_LDAS | 0.0011 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:75366438-chr8:81839891 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| STAG1--DGKG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | STAG1^ENSG00000118007.13 | chr3:136752195:- | DGKG^ENSG00000058866.15 | chr3:186105942:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:6509:29039 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:49.35Mb]""]" | chr3:136752195-chr3:186105942 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SSX2IP--AC008676.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SSX2IP^ENSG00000117155.17 | chr1:84655832:- | AC008676.1^ENSG00000248544.2 | chr5:157376207:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:9058:21262 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:84655832-chr5:157376207 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SSUH2--OXTR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSUH2^ENSG00000125046.15 | chr3:8703026:- | OXTR^ENSG00000180914.11 | chr3:8753224:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2277:37510:18389 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5341]""]" | chr3:8703026-chr3:8753224 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SSH2--GOSR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSH2^ENSG00000141298.19 | chr17:29793894:- | GOSR1^ENSG00000108587.16 | chr17:30481143:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1338:42049:25241 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr17:0.55Mb]""]" | chr17:29793894-chr17:30481143 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SSB--METTL5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SSB^ENSG00000138385.16 | chr2:169801026:+ | METTL5^ENSG00000138382.15 | chr2:169821273:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:50163:17661 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1983]""]" | chr2:169801026-chr2:169821273 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SRSF7--PCDHAC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRSF7^ENSG00000115875.19 | chr2:38749141:- | PCDHAC2^ENSG00000243232.6 | chr5:140967172:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:31985:28268 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:38749141-chr5:140967172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SRP14--PRELID1P3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SRP14^ENSG00000140319.11 | chr15:40036420:- | PRELID1P3^ENSG00000235816.3 | chr10:63427926:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2268:25027:20309 | . | NO_LDAS | 0.0017 | GC | 1.371 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:40036420-chr10:63427926 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SRIP1--SRI | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRIP1^ENSG00000248660.1 | chr4:58103246:+ | SRI^ENSG00000075142.14 | chr7:88209439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:39516:4293 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:58103246-chr7:88209439 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SRD5A1--ZNF814 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SRD5A1^ENSG00000145545.12 | chr5:6668549:+ | ZNF814^ENSG00000204514.10 | chr19:57859238:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:44735:24877 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:6668549-chr19:57859238 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SPTY2D1--SERGEF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPTY2D1^ENSG00000179119.15 | chr11:18634198:- | SERGEF^ENSG00000129158.11 | chr11:18008076:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:9341:25451 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.59Mb]""]" | chr11:18634198-chr11:18008076 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPESP1--AC027088.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPESP1^ENSG00000258484.4 | chr15:68818317:+ | AC027088.1^ENSG00000137808.12 | chr15:68974729:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:4543:24737 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""NEIGHBORS_OVERLAP:+:+:[16307]""]" | chr15:68818317-chr15:68974729 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SPC24--SLC39A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SPC24^ENSG00000161888.11 | chr19:11155617:- | SLC39A1^ENSG00000143570.19 | chr1:153962747:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:15708:4307 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:11155617-chr1:153962747 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SPATA2L--NFKBID | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SPATA2L^ENSG00000158792.16 | chr16:89698127:- | NFKBID^ENSG00000167604.15 | chr19:35896941:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1296:22325:23672 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr19]""]" | chr16:89698127-chr19:35896941 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SORBS1--PEX3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SORBS1^ENSG00000095637.22 | chr10:95367650:- | PEX3^ENSG00000034693.15 | chr6:143470961:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:28563:16792 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:95367650-chr6:143470961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNX6--NUBPL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNX6^ENSG00000129515.20 | chr14:34629907:- | NUBPL^ENSG00000151413.17 | chr14:31826629:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1233:6898:20855 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr14:2.70Mb]""]" | chr14:34629907-chr14:31826629 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNX32--AC005841.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNX32^ENSG00000172803.18 | chr11:65849824:+ | AC005841.1^ENSG00000258092.1 | chr12:2797818:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:5822:9323 | . | YES_LDAS | 0.0034 | AT | 1.5656 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:65849824-chr12:2797818 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNX29P1--AC025279.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SNX29P1^ENSG00000158482.10 | chr16:21385932:+ | AC025279.2^ENSG00000260413.1 | chr16:29326347:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1368:36175:24457 | . | YES_LDAS | 0.0017 | GT | 1.8256 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr16:7.93Mb]""]" | chr16:21385932-chr16:29326347 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SNX12--NUDT19P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNX12^ENSG00000147164.12 | chrX:71061028:- | NUDT19P3^ENSG00000216723.1 | chr6:114020163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:39241:13233 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:71061028-chr6:114020163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNRPF--EFHC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNRPF^ENSG00000139343.10 | chr12:95889181:+ | EFHC1^ENSG00000096093.16 | chr6:52452688:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:51797:9225 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:95889181-chr6:52452688 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNRPF--CDK17 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNRPF^ENSG00000139343.10 | chr12:95861293:+ | CDK17^ENSG00000059758.8 | chr12:96313454:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1477:45948:17030 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr12:0.37Mb]""]" | chr12:95861293-chr12:96313454 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNRPE--CHMP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNRPE^ENSG00000182004.13 | chr1:203869920:+ | CHMP5^ENSG00000086065.14 | chr9:33278156:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:36742:27567 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:203869920-chr9:33278156 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNRPD3--CTF1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNRPD3^ENSG00000100028.12 | chr22:24572061:+ | CTF1^ENSG00000150281.7 | chr16:30902862:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:28207:18585 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr16]""]" | chr22:24572061-chr16:30902862 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNORC--RAMP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNORC^ENSG00000182600.9 | chr2:232876122:+ | RAMP1^ENSG00000132329.11 | chr2:237874645:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:50972:18726 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:4.98Mb]""]" | chr2:232876122-chr2:237874645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNORC--AL049872.1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | SNORC^ENSG00000182600.9 | chr2:232870414:+ | AL049872.1^ENSG00000259020.3 | chr14:92026611:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:20554:9029 | . | YES_LDAS | 0.0007 | GT | 1.9086 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:232870414-chr14:92026611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNORA54--AL050331.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNORA54^ENSG00000207008.1 | chr11:2963756:- | AL050331.1^ENSG00000233558.1 | chr6:116259078:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1248:30642:24989 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:2963756-chr6:116259078 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNIP1--GNL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNIP1^ENSG00000163877.11 | chr1:37554006:- | GNL2^ENSG00000134697.13 | chr1:37569302:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:32899:14045 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12523]""]" | chr1:37554006-chr1:37569302 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNHG9--ZC3H12C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SNHG9^ENSG00000255198.4 | chr16:1965129:+ | ZC3H12C^ENSG00000149289.11 | chr11:110136663:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2269:23078:15363 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:1965129-chr11:110136663 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNHG5--MRPL1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SNHG5^ENSG00000203875.13 | chr6:85674271:- | MRPL1^ENSG00000169288.18 | chr4:77894176:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:38610:18053 | . | NO_LDAS | 0.0017 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:85674271-chr4:77894176 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SNHG4--AL512844.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNHG4^ENSG00000281398.4 | chr5:139280058:+ | AL512844.1^ENSG00000232952.1 | chr1:105892660:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2258:30310:8132 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr5--chr1]""]" | chr5:139280058-chr1:105892660 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SNAPC3--MUC6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SNAPC3^ENSG00000164975.15 | chr9:15463501:+ | MUC6^ENSG00000184956.16 | chr11:1030386:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:8232:13779 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:15463501-chr11:1030386 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SMYD3--CEP170P1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMYD3^ENSG00000185420.19 | chr1:246355031:- | CEP170P1^ENSG00000154608.14 | chr4:118488128:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:49718:4391 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:246355031-chr4:118488128 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SMIM10L1--LINC01252 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMIM10L1^ENSG00000256537.5 | chr12:11190111:+ | LINC01252^ENSG00000247157.7 | chr12:11549590:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42752:13401 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:0.37Mb]""]" | chr12:11190111-chr12:11549590 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SMC6--ZBTB3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMC6^ENSG00000163029.16 | chr2:17695152:- | ZBTB3^ENSG00000185670.9 | chr11:62753282:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:41636:11691 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr11]""]" | chr2:17695152-chr11:62753282 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| SMC6--NOL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMC6^ENSG00000163029.16 | chr2:17753626:- | NOL10^ENSG00000115761.16 | chr2:10644372:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:13256:5526 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:6.97Mb]""]" | chr2:17753626-chr2:10644372 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SMAGP--POU6F1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SMAGP^ENSG00000170545.17 | chr12:51246751:- | POU6F1^ENSG00000184271.17 | chr12:51206883:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:1332:23714 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr12:0.03Mb]"",""NEIGHBORS[26850]""]" | chr12:51246751-chr12:51206883 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SMAD6--CDC42EP5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SMAD6^ENSG00000137834.15 | chr15:66703471:+ | CDC42EP5^ENSG00000167617.3 | chr19:54465163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46895:6983 | . | NO_LDAS | 0.0017 | GT | 1.4295 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:66703471-chr19:54465163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SMAD4--ELAC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SMAD4^ENSG00000141646.14 | chr18:51067062:+ | ELAC1^ENSG00000141642.9 | chr18:50974493:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1324:32316:21472 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr18:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[40273]""]" | chr18:51067062-chr18:50974493 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLCO1A2--AC011029.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLCO1A2^ENSG00000084453.16 | chr12:21395355:- | AC011029.1^ENSG00000287352.1 | chr8:76306467:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:21354:28128 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:21395355-chr8:76306467 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SLC6A16--AC011450.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC6A16^ENSG00000063127.16 | chr19:49311084:- | AC011450.1^ENSG00000197813.6 | chr19:49332142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:45819:17422 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[6310]""]" | chr19:49311084-chr19:49332142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC4A7--OSBPL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC4A7^ENSG00000033867.16 | chr3:27409356:- | OSBPL10^ENSG00000144645.15 | chr3:31876512:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2153:34824:9505 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:4.17Mb]""]" | chr3:27409356-chr3:31876512 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC49A3--PAXIP1-DT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC49A3^ENSG00000169026.13 | chr4:686532:- | PAXIP1-DT^ENSG00000273344.1 | chr7:155003962:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:9891:3228 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:686532-chr7:155003962 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC45A1--CDCP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC45A1^ENSG00000162426.16 | chr1:8325349:+ | CDCP2^ENSG00000157211.11 | chr1:54152885:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:21314:23574 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:45.79Mb]""]" | chr1:8325349-chr1:54152885 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC41A2--TMTC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC41A2^ENSG00000136052.9 | chr12:104909655:- | TMTC2^ENSG00000179104.9 | chr12:82857010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2280:8677:26797 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:21.67Mb]""]" | chr12:104909655-chr12:82857010 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC38A6--MNAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC38A6^ENSG00000139974.16 | chr14:61052135:+ | MNAT1^ENSG00000020426.11 | chr14:60968229:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:27810:18403 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11149]""]" | chr14:61052135-chr14:60968229 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC35E4--APLF | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC35E4^ENSG00000100036.13 | chr22:30637069:+ | APLF^ENSG00000169621.10 | chr2:68587808:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:2246:12995 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:30637069-chr2:68587808 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC33A1--CCNJL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC33A1^ENSG00000169359.16 | chr3:155853223:- | CCNJL^ENSG00000135083.16 | chr5:160255708:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1129:40730:14690 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:155853223-chr5:160255708 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC31A1--SLC39A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC31A1^ENSG00000136868.11 | chr9:113221678:+ | SLC39A1^ENSG00000143570.19 | chr1:153962747:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2224:3136:26867 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:113221678-chr1:153962747 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| SLC30A7--AC093157.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC30A7^ENSG00000162695.12 | chr1:100974902:+ | AC093157.1^ENSG00000233184.7 | chr1:101086852:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:28288:24302 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[44087]""]" | chr1:100974902-chr1:101086852 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SLC30A1--EBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC30A1^ENSG00000170385.10 | chr1:211575436:- | EBP^ENSG00000147155.11 | chrX:48522038:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:48213:17114 | . | NO_LDAS | 0.0034 | AT | 1.8062 | AC | 1.5546 | "[""INTERCHROMOSOMAL[chr1--chrX]""]" | chr1:211575436-chrX:48522038 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC29A4--KRT5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC29A4^ENSG00000164638.11 | chr7:5291821:+ | KRT5^ENSG00000186081.12 | chr12:52514912:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2311:8014:3060 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:5291821-chr12:52514912 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC26A7--LRRC69 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC26A7^ENSG00000147606.9 | chr8:91394039:+ | LRRC69^ENSG00000214954.8 | chr8:91102219:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:25019:11691 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS_OVERLAP:+:+:[9742]""]" | chr8:91394039-chr8:91102219 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC26A4--BCAP29 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC26A4^ENSG00000091137.14 | chr7:107663435:+ | BCAP29^ENSG00000075790.12 | chr7:107613332:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1254:26306:28688 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[31658]""]" | chr7:107663435-chr7:107613332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC25A42--ARMC6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC25A42^ENSG00000181035.14 | chr19:19106385:+ | ARMC6^ENSG00000105676.14 | chr19:19042711:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1162:17091:24667 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9899 | "[""Klijn_CellLines"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3683]""]" | chr19:19106385-chr19:19042711 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC25A14--LINC01099 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | SLC25A14^ENSG00000102078.16 | chrX:130365676:+ | LINC01099^ENSG00000251504.1 | chr4:177903948:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:32923:23616 | . | NO_LDAS | 0.0011 | GT | 1.5656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:130365676-chr4:177903948 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC25A14--AL161457.2 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | SLC25A14^ENSG00000102078.16 | chrX:130365676:+ | AL161457.2^ENSG00000233178.7 | chr9:68394439:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2202:32923:23616 | . | NO_LDAS | 0.0011 | GT | 1.5656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:130365676-chr9:68394439 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC22A15--MAB21L3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC22A15^ENSG00000163393.13 | chr1:115976714:+ | MAB21L3^ENSG00000173212.4 | chr1:116120932:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:28555:11257 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[41701]""]" | chr1:115976714-chr1:116120932 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC22A15--ANKRD13C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC22A15^ENSG00000163393.13 | chr1:115976714:+ | ANKRD13C^ENSG00000118454.13 | chr1:70315566:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:43820:18922 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:45.62Mb]""]" | chr1:115976714-chr1:70315566 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC17A9--AP3M1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC17A9^ENSG00000101194.18 | chr20:62962722:+ | AP3M1^ENSG00000185009.13 | chr10:74138314:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:38125:5834 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:62962722-chr10:74138314 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC16A14--SP140L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC16A14^ENSG00000163053.11 | chr2:230059094:- | SP140L^ENSG00000185404.17 | chr2:230370908:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1198:23264:23812 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr2:0.26Mb]""]" | chr2:230059094-chr2:230370908 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC11A2--ZNF101P2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SLC11A2^ENSG00000110911.17 | chr12:51010695:- | ZNF101P2^ENSG00000234473.1 | chr1:192993500:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:16339:1364 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:51010695-chr1:192993500 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SLC11A2--MYBL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC11A2^ENSG00000110911.17 | chr12:51006174:- | MYBL1^ENSG00000185697.16 | chr8:66599142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1429:11501:15825 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:51006174-chr8:66599142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SLC10A7--ZGRF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SLC10A7^ENSG00000120519.15 | chr4:146503849:- | ZGRF1^ENSG00000138658.16 | chr4:112589874:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2161:21484:8595 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:33.62Mb]""]" | chr4:146503849-chr4:112589874 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SKAP1--MRPS22 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SKAP1^ENSG00000141293.16 | chr17:48430075:- | MRPS22^ENSG00000175110.13 | chr3:139346878:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1345:22002:15068 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:48430075-chr3:139346878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SKA3--CDRT4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SKA3^ENSG00000165480.16 | chr13:21176375:- | CDRT4^ENSG00000239704.11 | chr17:15440285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:49176:16988 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr13--chr17]""]" | chr13:21176375-chr17:15440285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SIRT6--ADAT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SIRT6^ENSG00000077463.15 | chr19:4180782:- | ADAT2^ENSG00000189007.16 | chr6:143425062:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:43909:17142 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:4180782-chr6:143425062 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SIAE--CDON | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SIAE^ENSG00000110013.13 | chr11:124675258:- | CDON^ENSG00000064309.15 | chr11:126023537:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1378:11250:4153 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:1.26Mb]""]" | chr11:124675258-chr11:126023537 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SHC2--COPS9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SHC2^ENSG00000129946.10 | chr19:430684:- | COPS9^ENSG00000172428.11 | chr2:240134005:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:20416:9379 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:430684-chr2:240134005 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGPP1--DEGS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGPP1^ENSG00000126821.8 | chr14:63727261:- | DEGS1^ENSG00000143753.13 | chr1:224189577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:35488:16568 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:63727261-chr1:224189577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGO2--KCTD18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGO2^ENSG00000163535.18 | chr2:200575461:+ | KCTD18^ENSG00000155729.13 | chr2:200490616:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1369:28360:7810 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS_OVERLAP:+:-:[9776]""]" | chr2:200575461-chr2:200490616 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SGMS2--LCLAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SGMS2^ENSG00000164023.14 | chr4:107858584:+ | LCLAT1^ENSG00000172954.14 | chr2:30640117:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1126:47121:22509 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:107858584-chr2:30640117 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SFXN5--IK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SFXN5^ENSG00000144040.13 | chr2:73042488:- | IK^ENSG00000113141.18 | chr5:140651714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2227:6760:25830 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:73042488-chr5:140651714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SFXN5--CTAGE4 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | SFXN5^ENSG00000144040.13 | chr2:72968493:- | CTAGE4^ENSG00000225932.3 | chr7:144183513:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2330:37526:11355 | . | NO_LDAS | 0.0007 | GC | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:72968493-chr7:144183513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SF3B5--SUPT7L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SF3B5^ENSG00000169976.7 | chr6:144095272:- | SUPT7L^ENSG00000119760.16 | chr2:27655554:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:6962:28562 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:144095272-chr2:27655554 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SETP14--METTL9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SETP14^ENSG00000240489.1 | chr3:155987940:+ | METTL9^ENSG00000197006.14 | chr16:21617966:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:10829:5470 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr3--chr16]""]" | chr3:155987940-chr16:21617966 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SETD6--NDRG4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SETD6^ENSG00000103037.12 | chr16:58515846:+ | NDRG4^ENSG00000103034.14 | chr16:58511213:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:26111:8202 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1851]""]" | chr16:58515846-chr16:58511213 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SENP7--GK5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SENP7^ENSG00000138468.16 | chr3:101332091:- | GK5^ENSG00000175066.16 | chr3:142225416:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:1218:25171 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr3:40.64Mb]""]" | chr3:101332091-chr3:142225416 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SEM1--PARP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEM1^ENSG00000127922.9 | chr7:96709688:- | PARP2^ENSG00000129484.14 | chr14:20354085:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1233:20052:24415 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:96709688-chr14:20354085 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEM1--NARS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEM1^ENSG00000127922.9 | chr7:96709688:- | NARS2^ENSG00000137513.10 | chr11:78443758:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:13790:24751 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr7--chr11]""]" | chr7:96709688-chr11:78443758 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC62--SLC37A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC62^ENSG00000008952.17 | chr3:169977051:+ | SLC37A3^ENSG00000157800.18 | chr7:140382596:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:43885:9309 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:169977051-chr7:140382596 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC24D--TAF1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC24D^ENSG00000150961.15 | chr4:118728561:- | TAF1B^ENSG00000115750.17 | chr2:9845220:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:18078:26909 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:118728561-chr2:9845220 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC22C--WASHC3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC22C^ENSG00000093183.14 | chr3:42568865:- | WASHC3^ENSG00000120860.11 | chr12:102026038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1209:51126:1841 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:42568865-chr12:102026038 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SEC11A--HSPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SEC11A^ENSG00000140612.14 | chr15:84716025:- | HSPH1^ENSG00000120694.20 | chr13:31148092:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2431:20376:24246 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr15--chr13]""]" | chr15:84716025-chr13:31148092 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SDHA--SMBD1P | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SDHA^ENSG00000073578.17 | chr5:254506:+ | SMBD1P^ENSG00000283426.1 | chr3:195708134:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2149:21476:7432 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:254506-chr3:195708134 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SDCBP2-AS1--DZANK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SDCBP2-AS1^ENSG00000234684.7 | chr20:1325529:+ | DZANK1^ENSG00000089091.16 | chr20:18398626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:13912:25802 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr20:17.00Mb]""]" | chr20:1325529-chr20:18398626 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SCYL2--UHRF1BP1L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCYL2^ENSG00000136021.19 | chr12:100291660:+ | UHRF1BP1L^ENSG00000111647.13 | chr12:100072813:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2322:14866:8763 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr12:0.12Mb]""]" | chr12:100291660-chr12:100072813 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SCN1B--STIM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SCN1B^ENSG00000105711.13 | chr19:35032694:+ | STIM1^ENSG00000167323.12 | chr11:4074563:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:49136:7558 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:35032694-chr11:4074563 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SCLT1--TNNT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SCLT1^ENSG00000151466.12 | chr4:128871361:- | TNNT2^ENSG00000118194.20 | chr1:201372038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2251:34776:18249 | . | NO_LDAS | 0.0034 | GC | 1.2867 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:128871361-chr1:201372038 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SCGB2B2--ZBTB34 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCGB2B2^ENSG00000205209.7 | chr19:34675630:- | ZBTB34^ENSG00000177125.5 | chr9:126879390:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2156:49362:29641 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:34675630-chr9:126879390 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SCD5--TMEM150C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SCD5^ENSG00000145284.12 | chr4:82680707:- | TMEM150C^ENSG00000249242.8 | chr4:82504667:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1218:9017:5610 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.07Mb]"",""NEIGHBORS[67182]""]" | chr4:82680707-chr4:82504667 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SATB1-AS1--ELAPOR2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | SATB1-AS1^ENSG00000228956.8 | chr3:18693953:+ | ELAPOR2^ENSG00000164659.15 | chr7:86947922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547 | . | YES_LDAS | 0.0008 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr3--chr7]""]" | chr3:18693953-chr7:86947922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SASH1--SAMD5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SASH1^ENSG00000111961.18 | chr6:148468555:+ | SAMD5^ENSG00000203727.4 | chr6:147508766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44500:11944 | . | NO_LDAS | 0.0034 | AT | 1.8892 | TC | 1.7465 | "[""ChimerKB"",""ChimerPub"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]" | chr6:148468555-chr6:147508766 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| SARDH--AC087623.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | SARDH^ENSG00000123453.18 | chr9:133690522:- | AC087623.1^ENSG00000255201.1 | chr8:38421856:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:33465:28114 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chr8]""]" | chr9:133690522-chr8:38421856 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SAPCD2--USP49 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAPCD2^ENSG00000186193.9 | chr9:137070328:- | USP49^ENSG00000164663.14 | chr6:41803968:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:39436:11411 | . | YES_LDAS | 0.0034 | GC | 1.4295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr6]""]" | chr9:137070328-chr6:41803968 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SAMD8--AC087664.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAMD8^ENSG00000156671.15 | chr10:75176216:+ | AC087664.2^ENSG00000253879.2 | chr8:59620010:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1301:50875:23994 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:75176216-chr8:59620010 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| SAMD5--AL033504.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147733729:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:10514:2850 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5219 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147733729 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SAMD5--AL033504.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | SAMD5^ENSG00000203727.4 | chr6:147509387:+ | AL033504.1^ENSG00000227681.5 | chr6:147692400:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:50487:28366 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.6895 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]" | chr6:147509387-chr6:147692400 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| SAMD13--DNASE2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD13^ENSG00000203943.9 | chr1:84325748:+ | DNASE2B^ENSG00000137976.8 | chr1:84401901:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:46061:29137 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4716 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8527]""]" | chr1:84325748-chr1:84401901 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SAMD12-AS1--COLEC10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD12-AS1^ENSG00000281641.3 | chr8:118764384:+ | COLEC10^ENSG00000184374.3 | chr8:119089680:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2372:50584:18922 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89297]""]" | chr8:118764384-chr8:119089680 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| SAMD12--UBE2W | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | SAMD12^ENSG00000177570.15 | chr8:118379560:- | UBE2W^ENSG00000104343.21 | chr8:73794115:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2376:24437:2471 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr8:44.31Mb]""]" | chr8:118379560-chr8:73794115 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| SAA1--HPS5 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | SAA1^ENSG00000173432.12 | chr11:18269333:+ | HPS5^ENSG00000110756.18 | chr11:18317907:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:9373:1350 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_INVERSION:+:-:[8691]""]" | chr11:18269333-chr11:18317907 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RXYLT1--AMN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RXYLT1^ENSG00000118600.12 | chr12:63785072:+ | AMN1^ENSG00000151743.11 | chr12:31702007:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:29355:11888 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr12:32.05Mb]""]" | chr12:63785072-chr12:31702007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RWDD3--CDC14A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RWDD3^ENSG00000122481.17 | chr1:95234315:+ | CDC14A^ENSG00000079335.20 | chr1:100390732:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:36653:4545 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:5.10Mb]""]" | chr1:95234315-chr1:100390732 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RWDD2B--USP16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RWDD2B^ENSG00000156253.7 | chr21:29019211:- | USP16^ENSG00000156256.15 | chr21:29027873:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2181:28546:8553 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_INVERSION:-:+:[5269]""]" | chr21:29019211-chr21:29027873 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RTCA--RPS27L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RTCA^ENSG00000137996.13 | chr1:100277316:+ | RPS27L^ENSG00000185088.14 | chr15:63153717:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1450:7407:25914 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:100277316-chr15:63153717 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RTCA--MFSD14A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RTCA^ENSG00000137996.13 | chr1:100274965:+ | MFSD14A^ENSG00000156875.14 | chr1:100049909:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:16112:15937 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.18Mb]""]" | chr1:100274965-chr1:100049909 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSRC1--VEPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSRC1^ENSG00000174891.13 | chr3:158203245:+ | VEPH1^ENSG00000197415.12 | chr3:157470529:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1240:43659:24106 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr3:0.57Mb]""]" | chr3:158203245-chr3:157470529 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RSRC1--PARL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RSRC1^ENSG00000174891.13 | chr3:158203245:+ | PARL^ENSG00000175193.14 | chr3:183844326:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2493:16695:20169 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:25.28Mb]""]" | chr3:158203245-chr3:183844326 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPUSD4--USP28 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPUSD4^ENSG00000165526.9 | chr11:126203261:- | USP28^ENSG00000048028.11 | chr11:113854335:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1215:25440:26180 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr11:12.33Mb]""]" | chr11:126203261-chr11:113854335 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPSAP56--RPSAP67 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPSAP56^ENSG00000284670.1 | chr16:73940793:- | RPSAP67^ENSG00000266858.1 | chr17:67777248:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1251:31046:26026 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:73940793-chr17:67777248 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPS17P5--AL355375.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPS17P5^ENSG00000060303.5 | chr6:50857435:- | AL355375.1^ENSG00000217067.2 | chr6:62547518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:2885:18081 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr6:11.69Mb]""]" | chr6:50857435-chr6:62547518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RPP40--AL359643.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPP40^ENSG00000124787.14 | chr6:4999809:- | AL359643.2^ENSG00000271978.1 | chr6:5034682:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1226:5733:4433 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[27693]""]" | chr6:4999809-chr6:5034682 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPP38--TTC21B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPP38^ENSG00000152464.15 | chr10:15102336:+ | TTC21B^ENSG00000123607.16 | chr2:165871020:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1119:37365:19062 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:15102336-chr2:165871020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPL39--STYX | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | RPL39^ENSG00000198918.8 | chrX:119789908:- | STYX^ENSG00000198252.12 | chr14:52771033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:11978:22985 | . | YES_LDAS | 0.0017 | GT | 1.6729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chrX--chr14]""]" | chrX:119789908-chr14:52771033 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPL36A--CENPI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPL36A^ENSG00000241343.10 | chrX:101391822:+ | CENPI^ENSG00000102384.13 | chrX:101101058:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51773:21318 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chrX:0.23Mb]""]" | chrX:101391822-chrX:101101058 | True | read_through|ribosomal | genes|RPL36A; | read_through|ribosomal | genes|RPL36A-HNRNPH2 | 0 | Blacklisted | FAIL | 1 | |||||
| RPAIN--APOBEC3C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RPAIN^ENSG00000129197.15 | chr17:5422829:+ | APOBEC3C^ENSG00000244509.4 | chr22:39017766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:4414:28324 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr17--chr22]""]" | chr17:5422829-chr22:39017766 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RPA2--HOXA-AS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RPA2^ENSG00000117748.10 | chr1:27914059:- | HOXA-AS3^ENSG00000254369.6 | chr7:27155300:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:37818:20351 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:27914059-chr7:27155300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RO60--CCSAP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RO60^ENSG00000116747.13 | chr1:193069634:+ | CCSAP^ENSG00000154429.11 | chr1:229327006:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1329:30035:28870 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:36.23Mb]""]" | chr1:193069634-chr1:229327006 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNU2-63P--RNF166 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNU2-63P^ENSG00000222724.1 | chr2:88016333:- | RNF166^ENSG00000158717.11 | chr16:88701418:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51813:25003 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:88016333-chr16:88701418 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNGTT--ZHX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNGTT^ENSG00000111880.16 | chr6:88678353:- | ZHX2^ENSG00000178764.8 | chr8:122973242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:4018:16876 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr8]""]" | chr6:88678353-chr8:122973242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNFT2--SMNDC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNFT2^ENSG00000135119.15 | chr12:116779348:+ | SMNDC1^ENSG00000119953.14 | chr10:110297728:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2391:34387:12532 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:116779348-chr10:110297728 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF8--AC004637.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF8^ENSG00000112130.17 | chr6:37354275:+ | AC004637.1^ENSG00000267304.1 | chr19:3674156:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:22261:25353 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:37354275-chr19:3674156 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RNF5--TSBP1-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF5^ENSG00000204308.8 | chr6:32212417:+ | TSBP1-AS1^ENSG00000225914.3 | chr6:32390214:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2473:36475:17661 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr6:0.07Mb]"",""NEIGHBORS[73847]""]" | chr6:32212417-chr6:32390214 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RNF34--NIPAL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF34^ENSG00000170633.16 | chr12:121420654:+ | NIPAL2^ENSG00000104361.10 | chr8:98294367:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1233:44435:28702 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.4716 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:121420654-chr8:98294367 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RNF2--ACBD6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF2^ENSG00000121481.11 | chr1:185045649:+ | ACBD6^ENSG00000230124.8 | chr1:180397605:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:2586:11061 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:4.54Mb]""]" | chr1:185045649-chr1:180397605 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF149--ALDH1L1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF149^ENSG00000163162.9 | chr2:101281859:- | ALDH1L1^ENSG00000144908.14 | chr3:126129913:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:38643:19090 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:101281859-chr3:126129913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RNF144A--MXD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RNF144A^ENSG00000151692.15 | chr2:6996993:+ | MXD4^ENSG00000123933.17 | chr4:2253346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:32907:24148 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:6996993-chr4:2253346 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RNF115--RCOR3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RNF115^ENSG00000265491.5 | chr1:145771711:- | RCOR3^ENSG00000117625.14 | chr1:211289178:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:8993:7726 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:65.43Mb]""]" | chr1:145771711-chr1:211289178 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RN7SL79P--SPC24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RN7SL79P^ENSG00000239595.3 | chr17:31465757:+ | SPC24^ENSG00000161888.11 | chr19:11146740:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:44775:25115 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:31465757-chr19:11146740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RN7SKP173--IQCK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RN7SKP173^ENSG00000199691.1 | chr20:38761824:+ | IQCK^ENSG00000174628.16 | chr16:19718357:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2229:34169:19020 | . | YES_LDAS | 0.0034 | GC | 1.6729 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:38761824-chr16:19718357 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RITA1--STAMBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RITA1^ENSG00000139405.16 | chr12:113191563:+ | STAMBP^ENSG00000124356.16 | chr2:73859254:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2435:3281:22775 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:113191563-chr2:73859254 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RIOK3--OAS3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RIOK3^ENSG00000101782.15 | chr18:23477205:+ | OAS3^ENSG00000111331.14 | chr12:112964096:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:47873:13499 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr18--chr12]""]" | chr18:23477205-chr12:112964096 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RIOK2--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RIOK2^ENSG00000058729.11 | chr5:97177116:- | DEPDC1B^ENSG00000035499.13 | chr5:60687227:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:12172:21724 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:36.46Mb]""]" | chr5:97177116-chr5:60687227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RIOK1--CCDC102A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RIOK1^ENSG00000124784.9 | chr6:7411451:+ | CCDC102A^ENSG00000135736.6 | chr16:57516463:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:48650:25101 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:7411451-chr16:57516463 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RICTOR--NAALADL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RICTOR^ENSG00000164327.13 | chr5:39021039:- | NAALADL2^ENSG00000177694.16 | chr3:175447229:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1164:33651:10781 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:39021039-chr3:175447229 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGSL1--CMC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGSL1^ENSG00000121446.20 | chr1:182507266:+ | CMC1^ENSG00000187118.14 | chr3:28316333:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:34719:13947 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:182507266-chr3:28316333 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGS6--AC005993.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RGS6^ENSG00000182732.18 | chr14:72018942:+ | AC005993.1^ENSG00000266869.2 | chr14:71915873:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:21007:6479 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]" | chr14:72018942-chr14:71915873 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RGS22--RSPO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RGS22^ENSG00000132554.20 | chr8:99996458:- | RSPO2^ENSG00000147655.12 | chr8:107989240:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1347:29703:5456 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:7.77Mb]""]" | chr8:99996458-chr8:107989240 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGS19--OPRL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGS19^ENSG00000171700.14 | chr20:64076525:- | OPRL1^ENSG00000125510.18 | chr20:64092688:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2362:3087:11257 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr20:0.00Mb]"",""LOCAL_INVERSION:-:+:[94]""]" | chr20:64076525-chr20:64092688 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGS10--EEF2K | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RGS10^ENSG00000148908.15 | chr10:119527306:- | EEF2K^ENSG00000103319.12 | chr16:22284042:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1319:24744:19650 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.1033 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:119527306-chr16:22284042 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RGPD3--SFR1 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | RGPD3^ENSG00000153165.19 | chr2:106404478:- | SFR1^ENSG00000156384.15 | chr10:104123007:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2352:20926:25620 | . | YES_LDAS | 0.0006 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:106404478-chr10:104123007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RGPD1--KCNIP2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | RGPD1^ENSG00000187627.17 | chr2:86984848:+ | KCNIP2^ENSG00000120049.20 | chr10:101826331:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1378:40350:8791 | . | NO_LDAS | 0.0005 | GT | 1.9086 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:86984848-chr10:101826331 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RGMA--NUP50 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RGMA^ENSG00000182175.14 | chr15:93072916:- | NUP50^ENSG00000093000.19 | chr22:45178238:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:31847:27301 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr22]""]" | chr15:93072916-chr22:45178238 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RFXANK--GLI2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFXANK^ENSG00000064490.14 | chr19:19198150:+ | GLI2^ENSG00000074047.22 | chr2:120955341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1487:8653:5288 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:19198150-chr2:120955341 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RFX2--E2F1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RFX2^ENSG00000087903.13 | chr19:6016261:- | E2F1^ENSG00000101412.13 | chr20:33678353:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:49047:23770 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr19--chr20]""]" | chr19:6016261-chr20:33678353 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RFK--REL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RFK^ENSG00000135002.12 | chr9:76394090:- | REL^ENSG00000162924.15 | chr2:60920574:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2312:13596:5722 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:76394090-chr2:60920574 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| REXO4--ZCCHC24 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | REXO4^ENSG00000148300.12 | chr9:133417738:- | ZCCHC24^ENSG00000165424.7 | chr10:79432626:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:12132:27371 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr9--chr10]""]" | chr9:133417738-chr10:79432626 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RBM47--AC008079.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RBM47^ENSG00000163694.15 | chr4:40437767:- | AC008079.1^ENSG00000280007.1 | chr22:18114308:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1217:7868:22425 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr22]""]" | chr4:40437767-chr22:18114308 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RBM41--GRIN2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RBM41^ENSG00000089682.16 | chrX:107115862:- | GRIN2A^ENSG00000183454.18 | chr16:9755172:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:27705:29291 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chrX--chr16]""]" | chrX:107115862-chr16:9755172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RBM27--DHX29 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RBM27^ENSG00000091009.8 | chr5:146230917:+ | DHX29^ENSG00000067248.10 | chr5:55256540:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:26079:15265 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr5:90.90Mb]""]" | chr5:146230917-chr5:55256540 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RASSF8--SSPN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASSF8^ENSG00000123094.15 | chr12:25995130:+ | SSPN^ENSG00000123096.12 | chr12:26224293:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2174:15303:24709 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr12:0.04Mb]"",""NEIGHBORS[42099]""]" | chr12:25995130-chr12:26224293 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| RASSF8--DCP1A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RASSF8^ENSG00000123094.15 | chr12:25995130:+ | DCP1A^ENSG00000272886.6 | chr3:53292827:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:47064:24316 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:25995130-chr3:53292827 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RARS2--TLCD2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RARS2^ENSG00000146282.18 | chr6:87555408:- | TLCD2^ENSG00000185561.10 | chr17:1707163:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:42348:7432 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:87555408-chr17:1707163 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RARS2--INTS4P1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | RARS2^ENSG00000146282.18 | chr6:87555408:- | INTS4P1^ENSG00000164669.13 | chr7:65230506:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:42348:7432 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:87555408-chr7:65230506 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAPGEF5--ZAN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAPGEF5^ENSG00000136237.19 | chr7:22162397:- | ZAN^ENSG00000146839.19 | chr7:100737021:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:16363:26909 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:78.38Mb]""]" | chr7:22162397-chr7:100737021 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RALGPS2--NAA38 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RALGPS2^ENSG00000116191.17 | chr1:178921531:+ | NAA38^ENSG00000183011.13 | chr17:7857150:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2262:21015:27820 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:178921531-chr17:7857150 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RAD54L--ANKRD36C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD54L^ENSG00000085999.13 | chr1:46260099:+ | ANKRD36C^ENSG00000174501.14 | chr2:95906822:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:17067:5456 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:46260099-chr2:95906822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD52--CPSF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD52^ENSG00000002016.18 | chr12:916296:- | CPSF4^ENSG00000160917.15 | chr7:99454044:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:45608:23448 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr7]""]" | chr12:916296-chr7:99454044 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD51--DPH5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAD51^ENSG00000051180.17 | chr15:40731157:+ | DPH5^ENSG00000117543.21 | chr1:101001544:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2315:1639:29515 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:40731157-chr1:101001544 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAD18--OXTR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAD18^ENSG00000070950.10 | chr3:8898894:- | OXTR^ENSG00000180914.11 | chr3:8753224:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2197:26411:13205 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[5774]""]" | chr3:8898894-chr3:8753224 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RABL3--LINC02614 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RABL3^ENSG00000144840.10 | chr3:120730696:- | LINC02614^ENSG00000241288.8 | chr3:125827455:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:37793:10668 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:5.08Mb]""]" | chr3:120730696-chr3:125827455 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RABGGTA--PEX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RABGGTA^ENSG00000100949.15 | chr14:24270852:- | PEX2^ENSG00000164751.15 | chr8:76983882:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1452:39525:15993 | . | YES_LDAS | 0.0034 | GC | 1.7465 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr14--chr8]""]" | chr14:24270852-chr8:76983882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RABEPK--DNAJC8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RABEPK^ENSG00000136933.17 | chr9:125232745:+ | DNAJC8^ENSG00000126698.11 | chr1:28220895:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:13281:6829 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:125232745-chr1:28220895 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RABEPK--AP001042.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RABEPK^ENSG00000136933.17 | chr9:125228059:+ | AP001042.1^ENSG00000205622.11 | chr21:38917400:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:42178:13163 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr21]""]" | chr9:125228059-chr21:38917400 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB8B--DENND4A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB8B^ENSG00000166128.13 | chr15:63189748:+ | DENND4A^ENSG00000174485.16 | chr15:65761438:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:31572:27161 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5301 | "[""INTRACHROMOSOMAL[chr15:2.39Mb]""]" | chr15:63189748-chr15:65761438 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB5A--AC092747.2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | RAB5A^ENSG00000144566.11 | chr3:19951061:+ | AC092747.2^ENSG00000256625.1 | chr12:27139966:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:30189:28604 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:19951061-chr12:27139966 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB38--AP000676.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAB38^ENSG00000123892.12 | chr11:88149675:- | AP000676.5^ENSG00000285835.1 | chr11:87964709:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:19567:17016 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]" | chr11:88149675-chr11:87964709 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RAB33B--AC104187.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | RAB33B^ENSG00000172007.7 | chr4:139454306:+ | AC104187.1^ENSG00000271937.1 | chr3:44338529:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1274:4851:22495 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:139454306-chr3:44338529 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| RAB31--TXNDC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB31^ENSG00000168461.13 | chr18:9708444:+ | TXNDC2^ENSG00000168454.12 | chr18:9885962:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:48804:7123 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr18:0.02Mb]"",""NEIGHBORS[23175]""]" | chr18:9708444-chr18:9885962 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB22A--CEP97 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB22A^ENSG00000124209.4 | chr20:58311122:+ | CEP97^ENSG00000182504.11 | chr3:101726594:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1342:21573:16568 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:58311122-chr3:101726594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| RAB18--LINC02680 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | RAB18^ENSG00000099246.17 | chr10:27509930:+ | LINC02680^ENSG00000285737.1 | chr10:27578371:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:29048:3592 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.02Mb]"",""NEIGHBORS[22191]""]" | chr10:27509930-chr10:27578371 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| RAB14--HOXC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | RAB14^ENSG00000119396.11 | chr9:121181434:- | HOXC4^ENSG00000198353.8 | chr12:54054850:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1438:7003:14592 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:121181434-chr12:54054850 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| QTRT1--KCNC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | QTRT1^ENSG00000213339.9 | chr19:10707382:+ | KCNC1^ENSG00000129159.9 | chr11:17736453:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2389:10473:10318 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:10707382-chr11:17736453 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PXT1--STK38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PXT1^ENSG00000179165.11 | chr6:36425914:- | STK38^ENSG00000112079.9 | chr6:36499990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1371:18143:6787 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:0.05Mb]"",""LOCAL_REARRANGEMENT:-:[51038]""]" | chr6:36425914-chr6:36499990 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PXK--KAT2B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PXK^ENSG00000168297.16 | chr3:58412963:+ | KAT2B^ENSG00000114166.8 | chr3:20152332:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:12908:28156 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr3:38.18Mb]""]" | chr3:58412963-chr3:20152332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PUSL1--SLC35E2A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PUSL1^ENSG00000169972.12 | chr1:1308720:+ | SLC35E2A^ENSG00000215790.8 | chr1:1739704:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:41499:3186 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.41Mb]""]" | chr1:1308720-chr1:1739704 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTS--NQO2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTS^ENSG00000150787.8 | chr11:112226526:+ | NQO2^ENSG00000124588.22 | chr6:3006468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:8200:28044 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:112226526-chr6:3006468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTPN9--SNUPN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPN9^ENSG00000169410.10 | chr15:75517259:- | SNUPN^ENSG00000169371.14 | chr15:75621056:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:11355:15124 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[18768]""]" | chr15:75517259-chr15:75621056 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTPN21--FAM111A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPN21^ENSG00000070778.13 | chr14:88517092:- | FAM111A^ENSG00000166801.16 | chr11:59148836:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1444:49532:11916 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:88517092-chr11:59148836 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTPN13--TMEM250 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PTPN13^ENSG00000163629.13 | chr4:86594468:+ | TMEM250^ENSG00000238227.8 | chr9:136117972:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:29339:8637 | . | NO_LDAS | 0.0017 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:86594468-chr9:136117972 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PTPN13--C2orf50 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PTPN13^ENSG00000163629.13 | chr4:86811108:+ | C2orf50^ENSG00000150873.12 | chr2:11143920:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2211:9551:4797 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:86811108-chr2:11143920 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTGR2--FOXN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTGR2^ENSG00000140043.11 | chr14:73879305:+ | FOXN2^ENSG00000170802.16 | chr2:48378856:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:5288:17338 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr2]""]" | chr14:73879305-chr2:48378856 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTGR1--AC080023.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PTGR1^ENSG00000106853.20 | chr9:111592926:- | AC080023.2^ENSG00000254719.1 | chr11:10272178:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1459:35771:14368 | . | YES_LDAS | 0.0017 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:111592926-chr11:10272178 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PTAR1--OR51G2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PTAR1^ENSG00000188647.13 | chr9:69759853:- | OR51G2^ENSG00000176893.5 | chr11:4915098:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:31240:20393 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:69759853-chr11:4915098 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSTPIP2--ITPKB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSTPIP2^ENSG00000152229.18 | chr18:45991902:- | ITPKB^ENSG00000143772.9 | chr1:226631838:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:3136:9211 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:45991902-chr1:226631838 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSTK--LINC-PINT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSTK^ENSG00000179988.15 | chr10:122983470:+ | LINC-PINT^ENSG00000231721.7 | chr7:130945835:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1483:15651:1883 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:122983470-chr7:130945835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSORS1C1--TNFSF9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSORS1C1^ENSG00000204540.11 | chr6:31125839:+ | TNFSF9^ENSG00000125657.5 | chr19:6532786:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1421:13750:22495 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:31125839-chr19:6532786 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMD9--EYA3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMD9^ENSG00000110801.14 | chr12:121903107:+ | EYA3^ENSG00000158161.16 | chr1:28058094:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1384:7415:12616 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:121903107-chr1:28058094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMD7--PM20D2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMD7^ENSG00000103035.11 | chr16:74301652:+ | PM20D2^ENSG00000146281.6 | chr6:89149265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:24210:11439 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:74301652-chr6:89149265 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMD10--NDUFAF2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PSMD10^ENSG00000101843.19 | chrX:108087953:- | NDUFAF2^ENSG00000164182.12 | chr5:60945294:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1358:16767:7095 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr5]""]" | chrX:108087953-chr5:60945294 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSMC1--KREMEN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMC1^ENSG00000100764.14 | chr14:90259193:+ | KREMEN1^ENSG00000183762.13 | chr22:29144956:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42841:5176 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr22]""]" | chr14:90259193-chr22:29144956 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMB8-AS1--GSTO1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PSMB8-AS1^ENSG00000204261.9 | chr6:32844383:+ | GSTO1^ENSG00000148834.13 | chr10:104255163:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2296:17868:20099 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr6--chr10]""]" | chr6:32844383-chr10:104255163 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PSMB2--TFAP2E-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMB2^ENSG00000126067.12 | chr1:35605233:- | TFAP2E-AS1^ENSG00000239636.1 | chr1:35574698:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2342:33174:28002 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[21812]""]" | chr1:35605233-chr1:35574698 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PSMA3-AS1--PLBD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMA3-AS1^ENSG00000257621.8 | chr14:58285591:- | PLBD2^ENSG00000151176.8 | chr12:113388459:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:1267:8441 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:58285591-chr12:113388459 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMA3-AS1--ARMH4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMA3-AS1^ENSG00000257621.8 | chr14:58297955:- | ARMH4^ENSG00000139971.15 | chr14:58139414:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:46919:19664 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:0.11Mb]""]" | chr14:58297955-chr14:58139414 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PSMA3-AS1--ARMH4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PSMA3-AS1^ENSG00000257621.8 | chr14:58291635:- | ARMH4^ENSG00000139971.15 | chr14:58139414:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2271:32187:17857 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:0.11Mb]""]" | chr14:58291635-chr14:58139414 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRX--RMC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRX^ENSG00000105227.16 | chr19:40394733:- | RMC1^ENSG00000141452.10 | chr18:23529695:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:27932:27581 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr18]""]" | chr19:40394733-chr18:23529695 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRX--HIPK4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRX^ENSG00000105227.16 | chr19:40403706:- | HIPK4^ENSG00000160396.9 | chr19:40384139:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:5894:7320 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""NEIGHBORS[3585]""]" | chr19:40403706-chr19:40384139 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRR4--TAS2R10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRR4^ENSG00000111215.12 | chr12:10847045:- | TAS2R10^ENSG00000121318.2 | chr12:10825431:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1346:3006:9407 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr12:0.02Mb]"",""NEIGHBORS[19491]""]" | chr12:10847045-chr12:10825431 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PROS1--MRRF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PROS1^ENSG00000184500.16 | chr3:93905859:- | MRRF^ENSG00000148187.18 | chr9:122280468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2137:25440:15559 | . | NO_LDAS | 0.0034 | AT | 1.9329 | AC | 1.7465 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:93905859-chr9:122280468 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PROM1--FBXL5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PROM1^ENSG00000007062.12 | chr4:16075687:- | FBXL5^ENSG00000118564.15 | chr4:15644708:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1131:23887:5666 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr4:0.28Mb]""]" | chr4:16075687-chr4:15644708 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRKCH--MNAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKCH^ENSG00000027075.15 | chr14:61391288:+ | MNAT1^ENSG00000020426.11 | chr14:60879714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2446:28911:25830 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr14:0.22Mb]""]" | chr14:61391288-chr14:60879714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRKACB--KCNQ4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKACB^ENSG00000142875.19 | chr1:84078371:+ | KCNQ4^ENSG00000117013.17 | chr1:40817265:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:12811:23195 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr1:43.24Mb]""]" | chr1:84078371-chr1:40817265 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRKAB1--CFAP251 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRKAB1^ENSG00000111725.11 | chr12:119668403:+ | CFAP251^ENSG00000158023.10 | chr12:121999716:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2245:41725:27007 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr12:2.24Mb]""]" | chr12:119668403-chr12:121999716 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRIM2--CMTM3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRIM2^ENSG00000146143.19 | chr6:57318480:+ | CMTM3^ENSG00000140931.20 | chr16:66609883:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:3168:7754 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:57318480-chr16:66609883 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRH2--PRR4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH2^ENSG00000134551.13 | chr12:10931080:+ | PRR4^ENSG00000111215.12 | chr12:10848407:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1108:47097:2962 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr12:0.08Mb]"",""LOCAL_INVERSION:+:-:[79761]""]" | chr12:10931080-chr12:10848407 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRH1--ITPR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:10973655:- | ITPR2^ENSG00000123104.12 | chr12:26387594:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:36159:25998 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr12:15.16Mb]""]" | chr12:10973655-chr12:26387594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRH1--DCBLD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRH1^ENSG00000231887.7 | chr12:11047020:- | DCBLD1^ENSG00000164465.19 | chr6:117569620:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:49402:21892 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:11047020-chr6:117569620 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PREP--HACE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PREP^ENSG00000085377.15 | chr6:105368903:- | HACE1^ENSG00000085382.12 | chr6:104750472:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2425:44605:3130 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:0.41Mb]""]" | chr6:105368903-chr6:104750472 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRELID3A--COG7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRELID3A^ENSG00000141391.14 | chr18:12422341:+ | COG7^ENSG00000168434.13 | chr16:23434718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:43772:14998 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr18--chr16]""]" | chr18:12422341-chr16:23434718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PRELID2--AC137770.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRELID2^ENSG00000186314.11 | chr5:145764931:- | AC137770.1^ENSG00000250842.1 | chr5:145381718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:32664:3214 | . | YES_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[90129]""]" | chr5:145764931-chr5:145381718 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRDX6-AS1--TNFSF4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173441919:- | TNFSF4^ENSG00000117586.11 | chr1:173188569:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1495:47509:25648 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173441919-chr1:173188569 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRDX6-AS1--TNFSF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173476632:- | TNFSF4^ENSG00000117586.11 | chr1:173207185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:39783:7726 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173476632-chr1:173207185 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PRDX6-AS1--TNFSF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRDX6-AS1^ENSG00000203739.4 | chr1:173460378:- | TNFSF4^ENSG00000117586.11 | chr1:173207185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2182:13993:19132 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr1:0.21Mb]""]" | chr1:173460378-chr1:173207185 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PRDM5--STXBP5L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRDM5^ENSG00000138738.11 | chr4:120818349:- | STXBP5L^ENSG00000145087.13 | chr3:121422522:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2389:38756:8721 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:120818349-chr3:121422522 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRAMEF12--NOP10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRAMEF12^ENSG00000116726.5 | chr1:12773783:+ | NOP10^ENSG00000182117.6 | chr15:34342050:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:15643:2401 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:12773783-chr15:34342050 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PRADC1--RNF13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PRADC1^ENSG00000135617.4 | chr2:73233094:- | RNF13^ENSG00000082996.20 | chr3:149872054:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2105:39662:8553 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:73233094-chr3:149872054 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PQBP1--QTRT1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PQBP1^ENSG00000102103.17 | chrX:48898576:+ | QTRT1^ENSG00000213339.9 | chr19:10708977:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1237:1971:8034 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr19]""]" | chrX:48898576-chr19:10708977 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPT2--XPNPEP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPT2^ENSG00000221988.13 | chr6:32162622:+ | XPNPEP3^ENSG00000196236.13 | chr22:40868999:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:9373:10851 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr6--chr22]""]" | chr6:32162622-chr22:40868999 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPT2--AL031595.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPT2^ENSG00000221988.13 | chr6:32157924:+ | AL031595.3^ENSG00000280434.1 | chr22:44151887:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:43367:10682 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr6--chr22]""]" | chr6:32157924-chr22:44151887 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PPP4R1--TWSG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPP4R1^ENSG00000154845.16 | chr18:9614226:- | TWSG1^ENSG00000128791.12 | chr18:9359972:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:35819:7670 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr18:0.14Mb]""]" | chr18:9614226-chr18:9359972 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PPP4R1--LINC01415 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PPP4R1^ENSG00000154845.16 | chr18:9595018:- | LINC01415^ENSG00000267325.2 | chr18:55779769:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1133:10554:20715 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr18:46.16Mb]""]" | chr18:9595018-chr18:55779769 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PPP1R3B--ADSS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PPP1R3B^ENSG00000173281.5 | chr8:9151347:- | ADSS2^ENSG00000035687.10 | chr1:244416078:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1216:9826:27077 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:9151347-chr1:244416078 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POU5F1--TYW1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POU5F1^ENSG00000204531.20 | chr6:31166534:- | TYW1^ENSG00000198874.13 | chr7:67067285:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:12326:4447 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:31166534-chr7:67067285 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| POM121B--POMZP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POM121B^ENSG00000205578.6 | chr7:73293588:+ | POMZP3^ENSG00000146707.14 | chr7:76625583:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2304:16169:24919 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr7:3.31Mb]""]" | chr7:73293588-chr7:76625583 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| POLR3G--UPF3A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | POLR3G^ENSG00000113356.13 | chr5:90506674:+ | UPF3A^ENSG00000169062.15 | chr13:114298840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:6056:15811 | . | YES_LDAS | 0.0017 | GT | 1.2729 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr5--chr13]""]" | chr5:90506674-chr13:114298840 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POLL--FAM71F1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POLL^ENSG00000166169.17 | chr10:101585858:- | FAM71F1^ENSG00000135248.15 | chr7:128716965:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1281:25310:10178 | . | NO_LDAS | 0.0034 | GC | 1.9656 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:101585858-chr7:128716965 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| POLE4--AC007681.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POLE4^ENSG00000115350.12 | chr2:74960146:+ | AC007681.1^ENSG00000270571.2 | chr2:75186830:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:47728:4055 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6402 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.18Mb]""]" | chr2:74960146-chr2:75186830 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| POLD3--RNF169 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POLD3^ENSG00000077514.9 | chr11:74636275:+ | RNF169^ENSG00000166439.6 | chr11:74789626:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1362:15125:16834 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.08Mb]"",""NEIGHBORS[79732]""]" | chr11:74636275-chr11:74789626 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| POLD3--RNF169 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | POLD3^ENSG00000077514.9 | chr11:74640841:+ | RNF169^ENSG00000166439.6 | chr11:74789626:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:5409:4069 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.8323 | "[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.08Mb]"",""NEIGHBORS[79732]""]" | chr11:74640841-chr11:74789626 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| POLA1--NDUFV2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | POLA1^ENSG00000101868.13 | chrX:24699549:+ | NDUFV2^ENSG00000178127.13 | chr18:9126831:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:4721:13499 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr18]""]" | chrX:24699549-chr18:9126831 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PNPLA7--WDR5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PNPLA7^ENSG00000130653.16 | chr9:137542642:- | WDR5^ENSG00000196363.10 | chr9:134141949:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2467:35164:27581 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr9:3.30Mb]""]" | chr9:137542642-chr9:134141949 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PNKP--AHSA2P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PNKP^ENSG00000039650.12 | chr19:49866399:- | AHSA2P^ENSG00000173209.23 | chr2:61178986:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2286:50665:7039 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:49866399-chr2:61178986 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PMS2P12--AC004980.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PMS2P12^ENSG00000228546.2 | chr7:102339115:+ | AC004980.4^ENSG00000250778.1 | chr7:76521943:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:29032:6086 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:25.82Mb]""]" | chr7:102339115-chr7:76521943 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PMP22--AC005703.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PMP22^ENSG00000109099.16 | chr17:15259094:- | AC005703.3^ENSG00000266667.1 | chr17:15416233:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1189:21427:2387 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr17:0.11Mb]""]" | chr17:15259094-chr17:15416233 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PMFBP1--SHPK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PMFBP1^ENSG00000118557.16 | chr16:72164896:- | SHPK^ENSG00000197417.9 | chr17:3621406:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2436:40139:5792 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr16--chr17]""]" | chr16:72164896-chr17:3621406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PMAIP1--ZNF845 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PMAIP1^ENSG00000141682.12 | chr18:59902680:+ | ZNF845^ENSG00000213799.13 | chr19:53351550:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:33684:12742 | . | YES_LDAS | 0.0034 | AT | 1.9656 | AC | 1.9329 | "[""INTERCHROMOSOMAL[chr18--chr19]""]" | chr18:59902680-chr19:53351550 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLSCR3--COIL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLSCR3^ENSG00000187838.17 | chr17:7390634:- | COIL^ENSG00000121058.5 | chr17:56939154:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:41733:15166 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr17:49.54Mb]""]" | chr17:7390634-chr17:56939154 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLRG1--AL356417.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLRG1^ENSG00000171566.12 | chr4:154537282:- | AL356417.3^ENSG00000285492.1 | chr6:159057160:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2473:23320:9814 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:154537282-chr6:159057160 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PLGLA--AC083899.1 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | PLGLA^ENSG00000240935.6 | chr2:106391020:+ | AC083899.1^ENSG00000204745.4 | chr2:87138256:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:29525:15545 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr2:19.19Mb]""]" | chr2:106391020-chr2:87138256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLEKHA8--CAMK1D | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLEKHA8^ENSG00000106086.20 | chr7:30074261:+ | CAMK1D^ENSG00000183049.13 | chr10:12825632:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2143:32907:5708 | . | YES_LDAS | 0.0034 | GT | 0.9968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:30074261-chr10:12825632 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLCL2--GRM7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PLCL2^ENSG00000154822.18 | chr3:16885366:+ | GRM7^ENSG00000196277.16 | chr3:7146452:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2494:42113:14592 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:9.06Mb]""]" | chr3:16885366-chr3:7146452 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PLA2G6--FLRT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PLA2G6^ENSG00000184381.20 | chr22:38120759:- | FLRT2^ENSG00000185070.11 | chr14:85646638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2179:48860:8679 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr14]""]" | chr22:38120759-chr14:85646638 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PKIB--SERINC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PKIB^ENSG00000135549.15 | chr6:122610535:+ | SERINC1^ENSG00000111897.7 | chr6:122458681:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1179:37146:16105 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_INVERSION:+:-:[127]""]" | chr6:122610535-chr6:122458681 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PKD1P6--AP000944.2 | 1 | 0 | 0.14 | 0.0 | INCL_NON_REF_SPLICE | PKD1P6^ENSG00000250251.6 | chr16:15137754:- | AP000944.2^ENSG00000277599.1 | chr11:65423963:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:49419:4657 | . | NO_LDAS | 0.0005 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:15137754-chr11:65423963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PITPNM3--KIAA0753 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PITPNM3^ENSG00000091622.16 | chr17:6525356:- | KIAA0753^ENSG00000198920.11 | chr17:6590578:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1164:38805:17605 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr17:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21592]""]" | chr17:6525356-chr17:6590578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PITPNM3--AC004706.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PITPNM3^ENSG00000091622.16 | chr17:6483517:- | AC004706.3^ENSG00000282936.2 | chr17:6635171:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1304:51328:20239 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr17:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[72064]""]" | chr17:6483517-chr17:6635171 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PIP4K2A--PARG | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PIP4K2A^ENSG00000150867.14 | chr10:22714183:- | PARG^ENSG00000227345.9 | chr10:49879830:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2188:5417:25970 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr10:27.10Mb]""]" | chr10:22714183-chr10:49879830 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PINX1--RP1L1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PINX1^ENSG00000254093.9 | chr8:10820193:- | RP1L1^ENSG00000183638.6 | chr8:10623220:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2114:18361:13695 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]" | chr8:10820193-chr8:10623220 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| PIN1--LHX6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PIN1^ENSG00000127445.14 | chr19:9838507:+ | LHX6^ENSG00000106852.15 | chr9:122221365:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2117:47372:25522 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:9838507-chr9:122221365 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PIBF1--DTWD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PIBF1^ENSG00000083535.16 | chr13:72965404:+ | DTWD1^ENSG00000104047.15 | chr15:49634536:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:47922:16526 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr13--chr15]""]" | chr13:72965404-chr15:49634536 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PGM5--GSDMB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PGM5^ENSG00000154330.13 | chr9:68479553:+ | GSDMB^ENSG00000073605.18 | chr17:39909924:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:37065:20729 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:68479553-chr17:39909924 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PGLS--GAPDHP72 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PGLS^ENSG00000130313.7 | chr19:17511960:+ | GAPDHP72^ENSG00000216624.3 | chr6:166064249:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:39686:12518 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr19--chr6]""]" | chr19:17511960-chr6:166064249 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PFKFB2--WSB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PFKFB2^ENSG00000123836.15 | chr1:207069430:+ | WSB1^ENSG00000109046.15 | chr17:27306814:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1368:32357:27427 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:207069430-chr17:27306814 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PFDN4--RUNDC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PFDN4^ENSG00000101132.10 | chr20:54208167:+ | RUNDC1^ENSG00000198863.7 | chr17:42991543:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1411:21969:2822 | . | YES_LDAS | 0.0034 | AT | 1.2729 | AC | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr17]""]" | chr20:54208167-chr17:42991543 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDXP--STXBP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDXP^ENSG00000241360.2 | chr22:37665796:+ | STXBP3^ENSG00000116266.11 | chr1:108807436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:8305:10598 | . | YES_LDAS | 0.0034 | GC | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:37665796-chr1:108807436 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDIA6--ARNT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PDIA6^ENSG00000143870.13 | chr2:10787281:- | ARNT2^ENSG00000172379.21 | chr15:80574148:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2141:20133:7179 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:10787281-chr15:80574148 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDHX--LINC-ROR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PDHX^ENSG00000110435.12 | chr11:34966784:+ | LINC-ROR^ENSG00000258609.3 | chr18:57069964:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2367:2116:6773 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr11--chr18]""]" | chr11:34966784-chr18:57069964 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PDCD5--NDUFV3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PDCD5^ENSG00000105185.12 | chr19:32582232:+ | NDUFV3^ENSG00000160194.18 | chr21:42908864:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2338:39727:1967 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr21]""]" | chr19:32582232-chr21:42908864 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PDC-AS1--ODR4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PDC-AS1^ENSG00000229739.4 | chr1:186436573:+ | ODR4^ENSG00000157181.16 | chr1:186406083:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1217:8742:20883 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2103]""]" | chr1:186436573-chr1:186406083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCTP--ANKFN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCTP^ENSG00000141179.14 | chr17:55774859:+ | ANKFN1^ENSG00000153930.12 | chr17:55938659:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2312:48464:6787 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr17:0.04Mb]"",""NEIGHBORS[39471]""]" | chr17:55774859-chr17:55938659 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCSK5--SALL1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | PCSK5^ENSG00000099139.14 | chr9:76193419:+ | SALL1^ENSG00000103449.12 | chr16:51140944:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2168:25982:17030 | . | NO_LDAS | 0.0011 | GC | 0.9056 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:76193419-chr16:51140944 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCSK4--GHRL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCSK4^ENSG00000115257.15 | chr19:1483939:- | GHRL^ENSG00000157017.16 | chr3:10289823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:7957:23644 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:1483939-chr3:10289823 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCLO--AC016065.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCLO^ENSG00000186472.20 | chr7:83134250:- | AC016065.1^ENSG00000246089.3 | chr8:6404527:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:47695:15741 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:83134250-chr8:6404527 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCIF1--ATP6V1E2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCIF1^ENSG00000100982.12 | chr20:45947438:+ | ATP6V1E2^ENSG00000250565.7 | chr2:46490778:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2391:34056:17366 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr20--chr2]""]" | chr20:45947438-chr2:46490778 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PCGF1--IRF9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCGF1^ENSG00000115289.14 | chr2:74506732:- | IRF9^ENSG00000213928.9 | chr14:24163878:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1485:32915:19650 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:74506732-chr14:24163878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCDHGB2--ADGRV1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDHGB2^ENSG00000253910.2 | chr5:141362556:+ | ADGRV1^ENSG00000164199.18 | chr5:90720935:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:29226:21444 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:50.20Mb]""]" | chr5:141362556-chr5:90720935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PCDHGB1--PCDHGA10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCDHGB1^ENSG00000254221.2 | chr5:141352669:+ | PCDHGA10^ENSG00000253846.2 | chr5:141494807:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1473:6938:19440 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.3383 | "[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.06Mb]"",""NEIGHBORS[60294]""]" | chr5:141352669-chr5:141494807 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| PCDH7--LINC02497 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PCDH7^ENSG00000169851.15 | chr4:30920369:+ | LINC02497^ENSG00000251182.2 | chr4:31176621:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2375:23401:18277 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.02Mb]"",""NEIGHBORS[24208]""]" | chr4:30920369-chr4:31176621 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| PCAT1--LGALS8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PCAT1^ENSG00000253438.4 | chr8:126557266:+ | LGALS8^ENSG00000116977.19 | chr1:236541696:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:46021:22593 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:126557266-chr1:236541696 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARN--THUMPD1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PARN^ENSG00000140694.17 | chr16:14599904:- | THUMPD1^ENSG00000066654.14 | chr16:20739071:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:27899:10514 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:6.07Mb]""]" | chr16:14599904-chr16:20739071 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARN--RNF38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARN^ENSG00000140694.17 | chr16:14578531:- | RNF38^ENSG00000137075.18 | chr9:36376127:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1320:31054:16315 | . | NO_LDAS | 0.0034 | GC | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:14578531-chr9:36376127 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PARM1--BIK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PARM1^ENSG00000169116.11 | chr4:75013144:+ | BIK^ENSG00000100290.3 | chr22:43110779:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1358:10999:13415 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr22]""]" | chr4:75013144-chr22:43110779 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PARD6G--FHOD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PARD6G^ENSG00000178184.16 | chr18:80202710:- | FHOD3^ENSG00000134775.15 | chr18:36576451:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:12221:25255 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr18:43.38Mb]""]" | chr18:80202710-chr18:36576451 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAPSS1--ABCB10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | PAPSS1^ENSG00000138801.9 | chr4:107631631:- | ABCB10^ENSG00000135776.5 | chr1:229521635:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1321:44492:3915 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:107631631-chr1:229521635 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAPOLG--AC026124.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PAPOLG^ENSG00000115421.13 | chr2:60782774:+ | AC026124.1^ENSG00000250280.2 | chr12:65285963:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:3767:7081 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:60782774-chr12:65285963 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PANK3--AC092683.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | PANK3^ENSG00000120137.7 | chr5:168549953:- | AC092683.1^ENSG00000230606.11 | chr2:97428049:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:40317:8511 | . | YES_LDAS | 0.0017 | GT | 1.5301 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr2]""]" | chr5:168549953-chr2:97428049 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| PAK1IP1--TAF7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PAK1IP1^ENSG00000111845.5 | chr6:10709532:+ | TAF7^ENSG00000178913.8 | chr5:141320039:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:6113:13667 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:10709532-chr5:141320039 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PAIP2--AP001636.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | PAIP2^ENSG00000120727.13 | chr5:139363926:+ | AP001636.3^ENSG00000255240.6 | chr11:59048410:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:41806:24905 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:139363926-chr11:59048410 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| PAAF1--PPP1R2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | PAAF1^ENSG00000175575.13 | chr11:73876741:+ | PPP1R2^ENSG00000184203.8 | chr3:195519185:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2158:29679:26685 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:73876741-chr3:195519185 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| P4HA2--SMAD9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | P4HA2^ENSG00000072682.20 | chr5:132227586:- | SMAD9^ENSG00000120693.14 | chr13:36872842:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:6477:13569 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr5--chr13]""]" | chr5:132227586-chr13:36872842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| P3H3--ADA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | P3H3^ENSG00000110811.20 | chr12:6839413:+ | ADA^ENSG00000196839.13 | chr20:44620905:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:30059:5064 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:6839413-chr20:44620905 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OXR1--LINC01425 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OXR1^ENSG00000164830.19 | chr8:106679292:+ | LINC01425^ENSG00000233997.5 | chr21:21748395:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1172:11808:5176 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr21]""]" | chr8:106679292-chr21:21748395 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| OSTF1P1--ACVR1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OSTF1P1^ENSG00000258244.1 | chr12:114588465:+ | ACVR1B^ENSG00000135503.13 | chr12:51994018:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:1421:16694 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:62.59Mb]""]" | chr12:114588465-chr12:51994018 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OSBPL10--C2CD5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OSBPL10^ENSG00000144645.15 | chr3:31668757:- | C2CD5^ENSG00000111731.12 | chr12:22544132:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:28231:13387 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:31668757-chr12:22544132 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OR5AK2--AL136295.17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OR5AK2^ENSG00000181273.2 | chr11:56988978:+ | AL136295.17^ENSG00000287765.1 | chr14:24189460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1425:27576:12784 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:56988978-chr14:24189460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OR52D1--ATP6AP2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | OR52D1^ENSG00000181609.5 | chr11:5489697:+ | ATP6AP2^ENSG00000182220.15 | chrX:40589573:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1483:17067:22747 | . | NO_LDAS | 0.0008 | GT | 1.3383 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:5489697-chrX:40589573 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OR51I2--MST1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OR51I2^ENSG00000187918.5 | chr11:5453927:+ | MST1^ENSG00000173531.15 | chr3:49688203:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1426:8580:2695 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:5453927-chr3:49688203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OR2A20P--SEC24D | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | OR2A20P^ENSG00000170356.9 | chr7:144251062:- | SEC24D^ENSG00000150961.15 | chr4:118817404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2337:27624:9337 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr7--chr4]""]" | chr7:144251062-chr4:118817404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| OPN3--ST7L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OPN3^ENSG00000054277.14 | chr1:241614043:- | ST7L^ENSG00000007341.19 | chr1:112550693:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2478:7286:27974 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr1:128.97Mb]""]" | chr1:241614043-chr1:112550693 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| OLIG2--CCNG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | OLIG2^ENSG00000205927.5 | chr21:33028248:+ | CCNG1^ENSG00000113328.19 | chr5:163439429:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2293:14494:22187 | . | NO_LDAS | 0.0034 | GT | 1.0389 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr21--chr5]""]" | chr21:33028248-chr5:163439429 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| OFD1--ZBED1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | OFD1^ENSG00000046651.15 | chrX:13755242:+ | ZBED1^ENSG00000214717.12 | chrX:2490769:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:16630:5792 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chrX:11.23Mb]""]" | chrX:13755242-chrX:2490769 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUTM2A-AS1--ATAD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUTM2A-AS1^ENSG00000223482.8 | chr10:87288442:- | ATAD1^ENSG00000138138.14 | chr10:87814612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1327:27907:10865 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.41Mb]""]" | chr10:87288442-chr10:87814612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUP85--ZDHHC16 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUP85^ENSG00000125450.11 | chr17:75234788:+ | ZDHHC16^ENSG00000171307.19 | chr10:97454714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1179:11824:5008 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:75234788-chr10:97454714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUP42--TRIM37 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUP42^ENSG00000136243.17 | chr7:23187146:+ | TRIM37^ENSG00000108395.14 | chr17:59049393:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2135:7626:11719 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr17]""]" | chr7:23187146-chr17:59049393 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUDT6--PTPN13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUDT6^ENSG00000170917.14 | chr4:122922335:- | PTPN13^ENSG00000163629.13 | chr4:86772778:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:32923:16273 | . | YES_LDAS | 0.0034 | GC | 1.7968 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr4:36.07Mb]""]" | chr4:122922335-chr4:86772778 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUDCD3--ISM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NUDCD3^ENSG00000015676.18 | chr7:44485008:- | ISM2^ENSG00000100593.18 | chr14:77475222:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:2335:3060 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr14]""]" | chr7:44485008-chr14:77475222 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NUDCD1--AC104248.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUDCD1^ENSG00000120526.12 | chr8:109245322:- | AC104248.1^ENSG00000253796.2 | chr8:109044127:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:10449:21374 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr8:0.18Mb]""]" | chr8:109245322-chr8:109044127 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NUBPL--DDB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUBPL^ENSG00000151413.17 | chr14:31565048:+ | DDB2^ENSG00000134574.12 | chr11:47216336:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1247:13798:7418 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:31565048-chr11:47216336 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NUAK2--NUAK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NUAK2^ENSG00000163545.11 | chr1:205308165:- | NUAK1^ENSG00000074590.14 | chr12:106072843:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:16525:17969 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:205308165-chr12:106072843 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NT5M--ARMH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NT5M^ENSG00000205309.14 | chr17:17323245:+ | ARMH1^ENSG00000198520.12 | chr1:44692928:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29113:13569 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:17323245-chr1:44692928 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NT5DC3--AC024901.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NT5DC3^ENSG00000111696.12 | chr12:103806322:- | AC024901.1^ENSG00000255910.2 | chr12:20009721:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:35318:18908 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:83.76Mb]""]" | chr12:103806322-chr12:20009721 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NSMCE1--DIAPH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NSMCE1^ENSG00000169189.17 | chr16:27257435:- | DIAPH3^ENSG00000139734.19 | chr13:59879468:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:47615:10809 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr13]""]" | chr16:27257435-chr13:59879468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NSFP1--LRRC37A3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NSFP1^ENSG00000260075.1 | chr17:46487140:+ | LRRC37A3^ENSG00000176809.10 | chr17:64898459:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1452:14955:28983 | . | YES_LDAS | 0.0017 | GT | 1.6729 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr17:18.37Mb]""]" | chr17:46487140-chr17:64898459 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NRG3--DONSON | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NRG3^ENSG00000185737.13 | chr10:82986399:+ | DONSON^ENSG00000159147.18 | chr21:33577704:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:3039:20421 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr10--chr21]""]" | chr10:82986399-chr21:33577704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NR6A1--CHMP4B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NR6A1^ENSG00000148200.17 | chr9:124733308:- | CHMP4B^ENSG00000101421.4 | chr20:33848467:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2264:28409:7390 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr9--chr20]""]" | chr9:124733308-chr20:33848467 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NR2F1--BUB1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NR2F1^ENSG00000175745.14 | chr5:93593749:+ | BUB1B^ENSG00000156970.13 | chr15:40185551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2194:48820:3116 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:93593749-chr15:40185551 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NR2C1--OTUD6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NR2C1^ENSG00000120798.17 | chr12:95057553:- | OTUD6B^ENSG00000155100.11 | chr8:91084008:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:33320:4125 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:95057553-chr8:91084008 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NR1H3--DDB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NR1H3^ENSG00000025434.19 | chr11:47248999:+ | DDB2^ENSG00000134574.12 | chr11:47232814:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2145:16088:23546 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9083]""]" | chr11:47248999-chr11:47232814 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NQO2--VPS36 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NQO2^ENSG00000124588.22 | chr6:3006559:+ | VPS36^ENSG00000136100.14 | chr13:52434882:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2356:4446:27848 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr13]""]" | chr6:3006559-chr13:52434882 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NQO2--FAM72A | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | NQO2^ENSG00000124588.22 | chr6:3006559:+ | FAM72A^ENSG00000196550.11 | chr1:206201889:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2272:42219:15307 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:3006559-chr1:206201889 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPTXR--SLC9A3R2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPTXR^ENSG00000221890.6 | chr22:38820067:- | SLC9A3R2^ENSG00000065054.14 | chr16:2036324:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:45932:19384 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr16]""]" | chr22:38820067-chr16:2036324 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPTN--BBS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NPTN^ENSG00000156642.17 | chr15:73633125:- | BBS4^ENSG00000140463.14 | chr15:72731305:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:43642:8188 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.82Mb]""]" | chr15:73633125-chr15:72731305 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPM1P35--EEF1A1P31 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPM1P35^ENSG00000255213.1 | chr11:62331240:+ | EEF1A1P31^ENSG00000237859.2 | chrX:154909640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:17382:15307 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr11--chrX]""]" | chr11:62331240-chrX:154909640 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NPC2--PGP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPC2^ENSG00000119655.11 | chr14:74493212:- | PGP^ENSG00000184207.9 | chr16:2214024:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:50988:22621 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:74493212-chr16:2214024 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NPAS3--RHOXF1P3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NPAS3^ENSG00000151322.20 | chr14:33800866:+ | RHOXF1P3^ENSG00000282933.2 | chrX:119943286:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:45624:27651 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr14--chrX]""]" | chr14:33800866-chrX:119943286 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOXA1--GAMT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOXA1^ENSG00000188747.8 | chr9:137426330:+ | GAMT^ENSG00000130005.13 | chr19:1397499:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:43206:28926 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:137426330-chr19:1397499 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOS1AP--AKTIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOS1AP^ENSG00000198929.13 | chr1:162154476:+ | AKTIP^ENSG00000166971.17 | chr16:53500329:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1269:10020:10851 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:162154476-chr16:53500329 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOL11--ABCA9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOL11^ENSG00000130935.10 | chr17:67743586:+ | ABCA9^ENSG00000154258.17 | chr17:69051139:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:23725:10514 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr17:1.23Mb]""]" | chr17:67743586-chr17:69051139 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NOL10--IGSF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NOL10^ENSG00000115761.16 | chr2:10689796:- | IGSF1^ENSG00000147255.19 | chrX:131364926:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2383:5077:3999 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:10689796-chrX:131364926 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NLRP7--ITPK1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NLRP7^ENSG00000167634.12 | chr19:54939633:- | ITPK1^ENSG00000100605.17 | chr14:92941379:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:40269:27063 | . | YES_LDAS | 0.0017 | GT | 1.5656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr14]""]" | chr19:54939633-chr14:92941379 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NLRP14--ZNF215 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NLRP14^ENSG00000158077.5 | chr11:7049838:+ | ZNF215^ENSG00000149054.16 | chr11:6955690:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:28708:9421 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19475]""]" | chr11:7049838-chr11:6955690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NKX3-1--SCAND2P | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NKX3-1^ENSG00000167034.10 | chr8:23679802:- | SCAND2P^ENSG00000176700.20 | chr15:84646154:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:37729:16946 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:23679802-chr15:84646154 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NKD2--DPYS | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | NKD2^ENSG00000145506.14 | chr5:1009000:+ | DPYS^ENSG00000147647.13 | chr8:104466990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:29194:2583 | . | NO_LDAS | 0.0011 | GC | 1.2729 | AG | 0.8366 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:1009000-chr8:104466990 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NIPA1--WRAP53 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NIPA1^ENSG00000170113.16 | chr15:22786819:+ | WRAP53^ENSG00000141499.17 | chr17:7688160:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1325:23692:20547 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr17]""]" | chr15:22786819-chr17:7688160 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NIP7--SARNP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NIP7^ENSG00000132603.15 | chr16:69340087:+ | SARNP^ENSG00000205323.9 | chr12:55803654:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2318:16258:29277 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr16--chr12]""]" | chr16:69340087-chr12:55803654 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NHEJ1--CNPPD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NHEJ1^ENSG00000187736.13 | chr2:219157472:- | CNPPD1^ENSG00000115649.16 | chr2:219176847:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:40342:25479 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4716 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11032]""]" | chr2:219157472-chr2:219176847 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NFIL3--FANCC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NFIL3^ENSG00000165030.4 | chr9:91423640:- | FANCC^ENSG00000158169.13 | chr9:95135502:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:32373:22018 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:3.68Mb]""]" | chr9:91423640-chr9:95135502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NFATC2IP--SENP5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NFATC2IP^ENSG00000176953.12 | chr16:28951221:+ | SENP5^ENSG00000119231.11 | chr3:196885356:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2221:24979:8398 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:28951221-chr3:196885356 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NEPRO--C3orf52 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NEPRO^ENSG00000163608.15 | chr3:113019542:- | C3orf52^ENSG00000114529.13 | chr3:112102838:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1371:16565:3242 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr3:0.87Mb]""]" | chr3:113019542-chr3:112102838 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NEMP1--EIF4HP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEMP1^ENSG00000166881.10 | chr12:57063231:- | EIF4HP2^ENSG00000237977.1 | chr22:30902215:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:13434:26432 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:57063231-chr22:30902215 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NEK8--ADCK2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEK8^ENSG00000160602.14 | chr17:28737993:+ | ADCK2^ENSG00000133597.11 | chr7:140673740:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:32333:10206 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr17--chr7]""]" | chr17:28737993-chr7:140673740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NEFM--CYP11A1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NEFM^ENSG00000104722.14 | chr8:24918579:+ | CYP11A1^ENSG00000140459.18 | chr15:74361783:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:22714:1841 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:24918579-chr15:74361783 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| NEBL--FGFR1OP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NEBL^ENSG00000078114.19 | chr10:20880794:- | FGFR1OP2^ENSG00000111790.14 | chr12:26963342:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1132:29461:3186 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr12]""]" | chr10:20880794-chr12:26963342 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFC2--KCTD14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFC2^ENSG00000151366.13 | chr11:78079579:- | KCTD14^ENSG00000151364.17 | chr11:78038758:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1243:49791:19426 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]" | chr11:78079579-chr11:78038758 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| NDUFC2--KCTD14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFC2^ENSG00000151366.13 | chr11:78072998:- | KCTD14^ENSG00000151364.17 | chr11:78038758:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:35779:6535 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]" | chr11:78072998-chr11:78038758 | False | 0 | Excluded | annotation | pattern: | ConjoinG | FAIL | 1 | ||||||
| NDUFB5--XRN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFB5^ENSG00000136521.13 | chr3:179604939:+ | XRN1^ENSG00000114127.11 | chr3:142405076:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2374:22180:15040 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr3:37.16Mb]""]" | chr3:179604939-chr3:142405076 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145391702:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145391702 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145386946:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145386946 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145382190:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145382190 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145377438:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145377438 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145372684:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145372684 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145367936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145367936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFAF5--NBPF20 | 1 | 0 | 0.14 | 0.0 | ONLY_REF_SPLICE | NDUFAF5^ENSG00000101247.18 | chr20:13785290:+ | NBPF20^ENSG00000162825.16 | chr1:145363176:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:12682:12350 | . | YES_LDAS | 0.0005 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:13785290-chr1:145363176 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA6-DT--LINC01160 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NDUFA6-DT^ENSG00000237037.9 | chr22:42121735:+ | LINC01160^ENSG00000231346.5 | chr1:111608601:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:42121735-chr1:111608601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA6-DT--DNPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDUFA6-DT^ENSG00000237037.9 | chr22:42133090:+ | DNPH1^ENSG00000112667.13 | chr6:43226395:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:36855:25858 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr6]""]" | chr22:42133090-chr6:43226395 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA6-DT--AL359813.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | NDUFA6-DT^ENSG00000237037.9 | chr22:42121735:+ | AL359813.1^ENSG00000287055.1 | chr6:43424978:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr22--chr6]""]" | chr22:42121735-chr6:43424978 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDUFA5--IQUB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDUFA5^ENSG00000128609.16 | chr7:123542103:- | IQUB^ENSG00000164675.11 | chr7:123512344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:20198:7656 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1920]""]" | chr7:123542103-chr7:123512344 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NDC80--IKBKB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NDC80^ENSG00000080986.13 | chr18:2579029:+ | IKBKB^ENSG00000104365.16 | chr8:42329368:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2278:31548:22159 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr18--chr8]""]" | chr18:2579029-chr8:42329368 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NDC1--GLIS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NDC1^ENSG00000058804.12 | chr1:53767971:- | GLIS1^ENSG00000174332.5 | chr1:53600278:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1158:43311:28212 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[27372]""]" | chr1:53767971-chr1:53600278 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NCAPG2--AC002066.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NCAPG2^ENSG00000146918.20 | chr7:158671514:- | AC002066.1^ENSG00000237813.4 | chr7:116243936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:9826:14242 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:42.13Mb]""]" | chr7:158671514-chr7:116243936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBPF19--NOTCH2NLA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NBPF19^ENSG00000271383.7 | chr1:149482226:+ | NOTCH2NLA^ENSG00000264343.6 | chr1:146147747:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1247:46474:4741 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:3.25Mb]""]" | chr1:149482226-chr1:146147747 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NBN--ZDHHC13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NBN^ENSG00000104320.14 | chr8:89982722:- | ZDHHC13^ENSG00000177054.14 | chr11:19164301:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2363:19324:6871 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.585 | "[""INTERCHROMOSOMAL[chr8--chr11]""]" | chr8:89982722-chr11:19164301 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NAT9--PRPF39 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NAT9^ENSG00000109065.12 | chr17:74772218:- | PRPF39^ENSG00000185246.18 | chr14:45110549:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1181:21023:14662 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr17--chr14]""]" | chr17:74772218-chr14:45110549 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| NARS2--GAB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | NARS2^ENSG00000137513.10 | chr11:78441091:- | GAB2^ENSG00000033327.13 | chr11:78280901:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1334:7383:23546 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8256 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[17620]""]" | chr11:78441091-chr11:78280901 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| NAF1--KLF3-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | NAF1^ENSG00000145414.9 | chr4:163164213:- | KLF3-AS1^ENSG00000231160.10 | chr4:38664541:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:31588:18641 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.4256 | "[""INTRACHROMOSOMAL[chr4:124.45Mb]""]" | chr4:163164213-chr4:38664541 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MYB--FAM83B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MYB^ENSG00000118513.19 | chr6:135181536:+ | FAM83B^ENSG00000168143.9 | chr6:54870187:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1133:15950:17899 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:80.24Mb]""]" | chr6:135181536-chr6:54870187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MUTYH--TESK2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MUTYH^ENSG00000132781.19 | chr1:45340219:- | TESK2^ENSG00000070759.17 | chr1:45355449:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1112:24065:18866 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2990]""]" | chr1:45340219-chr1:45355449 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MUTYH--SRD5A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MUTYH^ENSG00000132781.19 | chr1:45334391:- | SRD5A1^ENSG00000145545.12 | chr5:6656078:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2116:34379:7165 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:45334391-chr5:6656078 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MUC3A--MUC12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MUC3A^ENSG00000169894.18 | chr7:100966743:+ | MUC12^ENSG00000205277.9 | chr7:100990631:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1245:50786:23364 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.7968 | "[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1276]""]" | chr7:100966743-chr7:100990631 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MTURN--ZNRF2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTURN^ENSG00000180354.16 | chr7:30135298:+ | ZNRF2^ENSG00000180233.11 | chr7:30323642:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2205:34323:21808 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:30135298-chr7:30323642 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MTND6P22--KCTD9 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | MTND6P22^ENSG00000270230.1 | chr5:100046781:+ | KCTD9^ENSG00000104756.16 | chr8:25446250:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:50511:27231 | . | NO_LDAS | 0.0011 | GT | 1.5219 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:100046781-chr8:25446250 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MTMR1--MAMLD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MTMR1^ENSG00000063601.17 | chrX:150693676:+ | MAMLD1^ENSG00000013619.14 | chrX:150445454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:30585:16119 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chrX:0.18Mb]""]" | chrX:150693676-chrX:150445454 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MTHFS--CMC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MTHFS^ENSG00000136371.11 | chr15:79889342:- | CMC1^ENSG00000187118.14 | chr3:28263291:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1113:18555:12770 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:79889342-chr3:28263291 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MTERF4--GPR89A | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | MTERF4^ENSG00000122085.17 | chr2:241097243:- | GPR89A^ENSG00000117262.19 | chr1:145663329:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:1914:2135 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:241097243-chr1:145663329 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MSH3--TENT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MSH3^ENSG00000113318.11 | chr5:80813741:+ | TENT2^ENSG00000164329.13 | chr5:79619612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1437:25019:14634 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr5:0.97Mb]""]" | chr5:80813741-chr5:79619612 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRTO4--MUTYH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRTO4^ENSG00000053372.5 | chr1:19251863:+ | MUTYH^ENSG00000132781.19 | chr1:45334511:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15004:17184 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:26.07Mb]""]" | chr1:19251863-chr1:45334511 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS7--GNG10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS7^ENSG00000125445.11 | chr17:75263507:+ | GNG10^ENSG00000242616.4 | chr9:111669272:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:22495:23686 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr9]""]" | chr17:75263507-chr9:111669272 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS6--SMARCA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34125480:+ | SMARCA2^ENSG00000080503.24 | chr9:2028987:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2160:34808:16960 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr21--chr9]""]" | chr21:34125480-chr9:2028987 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS6--MAPK8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS6^ENSG00000243927.6 | chr21:34073745:+ | MAPK8^ENSG00000107643.16 | chr10:48424514:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36693:16638 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr21--chr10]""]" | chr21:34073745-chr10:48424514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS35--KATNBL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS35^ENSG00000061794.13 | chr12:27710955:+ | KATNBL1^ENSG00000134152.11 | chr15:34163690:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:23943:13751 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:27710955-chr15:34163690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS31--UCHL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MRPS31^ENSG00000102738.8 | chr13:40756873:- | UCHL3^ENSG00000118939.18 | chr13:75560753:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2481:5150:14970 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr13:34.78Mb]""]" | chr13:40756873-chr13:75560753 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MRPS22--RPL5P27 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS22^ENSG00000175110.13 | chr3:139355790:+ | RPL5P27^ENSG00000228195.2 | chr10:116751246:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:12836:3088 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:139355790-chr10:116751246 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPS18A--NIM1K | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPS18A^ENSG00000096080.12 | chr6:43687668:- | NIM1K^ENSG00000177453.7 | chr5:43277180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:32147:21570 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr5]""]" | chr6:43687668-chr5:43277180 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MRPL19--TLE4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MRPL19^ENSG00000115364.14 | chr2:75652216:+ | TLE4^ENSG00000106829.20 | chr9:79704805:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:45819:26839 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:75652216-chr9:79704805 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MROH7--TMEM91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MROH7^ENSG00000184313.20 | chr1:54674151:+ | TMEM91^ENSG00000142046.15 | chr19:41378281:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:50001:5050 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:54674151-chr19:41378281 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MREG--AL356218.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MREG^ENSG00000118242.16 | chr2:216013233:- | AL356218.2^ENSG00000286322.1 | chr9:33410261:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2147:38805:10879 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr2--chr9]""]" | chr2:216013233-chr9:33410261 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MPV17--PHKG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MPV17^ENSG00000115204.15 | chr2:27322448:- | PHKG1^ENSG00000164776.10 | chr7:56088975:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2225:19761:17745 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr7]""]" | chr2:27322448-chr7:56088975 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MPP6--MFAP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MPP6^ENSG00000105926.16 | chr7:24625736:+ | MFAP3^ENSG00000037749.13 | chr5:154121718:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2249:12714:24344 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:24625736-chr5:154121718 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MPP5--TMEM98 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MPP5^ENSG00000072415.10 | chr14:67279537:+ | TMEM98^ENSG00000006042.12 | chr17:32942318:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2329:38360:25185 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:67279537-chr17:32942318 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MPLKIP--SUGCT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MPLKIP^ENSG00000168303.9 | chr7:40134229:- | SUGCT^ENSG00000175600.16 | chr7:40449287:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1242:23102:1392 | . | YES_LDAS | 0.0034 | GT | 1.3383 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_INVERSION:-:+:[383]""]" | chr7:40134229-chr7:40449287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MORC3--DMXL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MORC3^ENSG00000159256.13 | chr21:36360258:+ | DMXL1^ENSG00000172869.14 | chr5:119246995:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:32187:7095 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr21--chr5]""]" | chr21:36360258-chr5:119246995 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MOB4--AC019080.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MOB4^ENSG00000115540.15 | chr2:197516146:+ | AC019080.1^ENSG00000213963.6 | chr2:177311328:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:39711:23994 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr2:20.12Mb]""]" | chr2:197516146-chr2:177311328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MNAT1--SMAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MNAT1^ENSG00000020426.11 | chr14:60798160:+ | SMAP1^ENSG00000112305.15 | chr6:70836941:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:48618:4027 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr6]""]" | chr14:60798160-chr6:70836941 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MMUT--AC022211.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MMUT^ENSG00000146085.8 | chr6:49453581:- | AC022211.2^ENSG00000263843.1 | chr17:75271484:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2337:29542:21738 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:49453581-chr17:75271484 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MLYCD--EXOC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MLYCD^ENSG00000103150.7 | chr16:83912367:+ | EXOC1^ENSG00000090989.18 | chr4:55871101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1151:12714:8398 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:83912367-chr4:55871101 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MLX--GPR34 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MLX^ENSG00000108788.12 | chr17:42568506:+ | GPR34^ENSG00000171659.15 | chrX:41688967:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2398:45713:2527 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr17--chrX]""]" | chr17:42568506-chrX:41688967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MLST8--AP000812.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MLST8^ENSG00000167965.18 | chr16:2207110:+ | AP000812.3^ENSG00000284844.1 | chr11:72108605:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:19858:28002 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr11]""]" | chr16:2207110-chr11:72108605 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR4453--FBXW7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR4453^ENSG00000283792.1 | chr4:152536538:+ | FBXW7^ENSG00000109670.16 | chr4:152411872:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2392:4333:22691 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr4:0.00Mb]"",""LOCAL_INVERSION:+:-:[336]""]" | chr4:152536538-chr4:152411872 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR4435-2HG--PHF23 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR4435-2HG^ENSG00000172965.17 | chr2:111494885:- | PHF23^ENSG00000040633.13 | chr17:7237660:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:42380:8721 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr17]""]" | chr2:111494885-chr17:7237660 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR4435-2HG--HMGN5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR4435-2HG^ENSG00000172965.17 | chr2:111494885:- | HMGN5^ENSG00000198157.11 | chrX:81118485:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:50818:2794 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:111494885-chrX:81118485 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR3648-2--CDKN2AIP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR3648-2^ENSG00000264462.1 | chr21:8987035:+ | CDKN2AIP^ENSG00000168564.6 | chr4:183444933:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2133:1947:11411 | . | YES_LDAS | 0.0034 | AT | 1.053 | AC | 1.3996 | "[""INTERCHROMOSOMAL[chr21--chr4]""]" | chr21:8987035-chr4:183444933 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR3605--TPTEP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR3605^ENSG00000284154.1 | chr1:33331376:- | TPTEP2^ENSG00000244627.5 | chr22:38381968:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:47170:16596 | . | NO_LDAS | 0.0034 | GC | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr22]""]" | chr1:33331376-chr22:38381968 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR222HG--CDK19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIR222HG^ENSG00000270069.1 | chrX:45769786:- | CDK19^ENSG00000155111.15 | chr6:110746201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:12455:25129 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chrX--chr6]""]" | chrX:45769786-chr6:110746201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIR2052HG--GDAP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR2052HG^ENSG00000254349.6 | chr8:74702456:+ | GDAP1^ENSG00000104381.14 | chr8:74360303:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2234:46005:3564 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr8:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[81768]""]" | chr8:74702456-chr8:74360303 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MIR181A1HG--PTK2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIR181A1HG^ENSG00000229989.4 | chr1:198899190:- | PTK2B^ENSG00000120899.18 | chr8:27444241:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:28611:3873 | . | YES_LDAS | 0.0034 | AT | 1.8256 | AC | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:198899190-chr8:27444241 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MIPOL1--AL121790.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MIPOL1^ENSG00000151338.18 | chr14:37422949:+ | AL121790.1^ENSG00000258414.1 | chr14:37564219:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1397:44290:10402 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[11686]""]" | chr14:37422949-chr14:37564219 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| MIOS--UMAD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MIOS^ENSG00000164654.16 | chr7:7606071:+ | UMAD1^ENSG00000219545.11 | chr7:7801670:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1178:44273:14998 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7968 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[31779]""]" | chr7:7606071-chr7:7801670 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MINDY2--ACADSB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MINDY2^ENSG00000128923.11 | chr15:58802377:+ | ACADSB^ENSG00000196177.13 | chr10:123053695:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:36547:23504 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:58802377-chr10:123053695 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MICOS10--MOB4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MICOS10^ENSG00000173436.15 | chr1:19597109:+ | MOB4^ENSG00000115540.15 | chr2:197535530:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:48472:9267 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:19597109-chr2:197535530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MICA--MYL9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MICA^ENSG00000204520.14 | chr6:31411324:+ | MYL9^ENSG00000101335.10 | chr20:36549271:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1217:16565:17394 | . | YES_LDAS | 0.0034 | AT | 1.8062 | AC | 1.2419 | "[""INTERCHROMOSOMAL[chr6--chr20]""]" | chr6:31411324-chr20:36549271 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MGST1--AC007529.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MGST1^ENSG00000008394.13 | chr12:16357699:+ | AC007529.2^ENSG00000283240.1 | chr12:16661766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2107:40325:8749 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6895 | "[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]" | chr12:16357699-chr12:16661766 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MFSD8--ZNF714 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD8^ENSG00000164073.11 | chr4:127965072:- | ZNF714^ENSG00000160352.16 | chr19:21116807:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1307:2060:9982 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr4--chr19]""]" | chr4:127965072-chr19:21116807 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD14A--SLC35A3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD14A^ENSG00000156875.14 | chr1:100050004:+ | SLC35A3^ENSG00000117620.15 | chr1:100011365:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:21371:29417 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2461]""]" | chr1:100050004-chr1:100011365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD14A--CDC14A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD14A^ENSG00000156875.14 | chr1:100080659:+ | CDC14A^ENSG00000079335.20 | chr1:100390732:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:40827:12756 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr1:0.26Mb]""]" | chr1:100080659-chr1:100390732 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD13A--AC100849.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFSD13A^ENSG00000138111.14 | chr10:102469197:+ | AC100849.1^ENSG00000253557.6 | chr8:19246825:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2287:16662:22579 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:102469197-chr8:19246825 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFSD13A--AC007040.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFSD13A^ENSG00000138111.14 | chr10:102472950:+ | AC007040.3^ENSG00000277764.1 | chr2:70900167:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1272:45827:26264 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:102472950-chr2:70900167 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MFGE8--IKBKG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFGE8^ENSG00000140545.15 | chr15:88905757:- | IKBKG^ENSG00000269335.6 | chrX:154551988:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1282:51773:23868 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr15--chrX]""]" | chr15:88905757-chrX:154551988 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFGE8--CEPT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MFGE8^ENSG00000140545.15 | chr15:88905757:- | CEPT1^ENSG00000134255.14 | chr1:111147642:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:18822:22873 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:88905757-chr1:111147642 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MFAP3--IL1RAPL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFAP3^ENSG00000037749.13 | chr5:154053312:+ | IL1RAPL2^ENSG00000189108.13 | chrX:105717453:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2118:35415:8034 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chrX]""]" | chr5:154053312-chrX:105717453 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MFAP2--SCLY | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MFAP2^ENSG00000117122.14 | chr1:16975269:- | SCLY^ENSG00000132330.18 | chr2:238080779:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1409:30342:21808 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:16975269-chr2:238080779 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| METTL8--RMDN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | METTL8^ENSG00000123600.20 | chr2:171325841:- | RMDN1^ENSG00000176623.12 | chr8:86474953:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1387:19971:14998 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:171325841-chr8:86474953 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| METTL8--FARS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | METTL8^ENSG00000123600.20 | chr2:171360422:- | FARS2^ENSG00000145982.13 | chr6:5545180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2329:38983:28870 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:171360422-chr6:5545180 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| METTL3--AC010198.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | METTL3^ENSG00000165819.12 | chr14:21503664:- | AC010198.1^ENSG00000246331.2 | chr12:30780086:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:37470:2822 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:21503664-chr12:30780086 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| METTL27--LINC01348 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | METTL27^ENSG00000165171.11 | chr7:73840031:- | LINC01348^ENSG00000280587.1 | chr1:235065586:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:3977:15180 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:73840031-chr1:235065586 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| METTL27--ANGPT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | METTL27^ENSG00000165171.11 | chr7:73842018:- | ANGPT2^ENSG00000091879.14 | chr8:6508337:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:20351:21486 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:73842018-chr8:6508337 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MESD--TBX5-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MESD^ENSG00000117899.11 | chr15:80948780:- | TBX5-AS1^ENSG00000255399.4 | chr12:114412446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:6234:28002 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:80948780-chr12:114412446 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MEMO1--SPAST | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MEMO1^ENSG00000162959.14 | chr2:32010187:- | SPAST^ENSG00000021574.13 | chr2:32114638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:22236:15251 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""LOCAL_INVERSION:-:+:[52326]""]" | chr2:32010187-chr2:32114638 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MEIOSIN--AP004550.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEIOSIN^ENSG00000237452.3 | chr19:45762129:+ | AP004550.1^ENSG00000254573.1 | chr11:134572906:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:13580:20911 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:45762129-chr11:134572906 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MEIOB--PRICKLE3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEIOB^ENSG00000162039.17 | chr16:1860403:- | PRICKLE3^ENSG00000012211.13 | chrX:49184660:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:15748:21724 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr16--chrX]""]" | chr16:1860403-chrX:49184660 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MED28--LCORL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED28^ENSG00000118579.13 | chr4:17623794:+ | LCORL^ENSG00000178177.16 | chr4:17972885:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1227:24760:25143 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr4:0.21Mb]""]" | chr4:17623794-chr4:17972885 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED27--DNAJC25 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED27^ENSG00000160563.14 | chr9:131939381:- | DNAJC25^ENSG00000059769.20 | chr9:111642857:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2121:17172:24891 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:20.20Mb]""]" | chr9:131939381-chr9:111642857 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED12L--SEC62 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED12L^ENSG00000144893.12 | chr3:151190931:+ | SEC62^ENSG00000008952.17 | chr3:169975608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:20643:13891 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr3:18.53Mb]""]" | chr3:151190931-chr3:169975608 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED12L--RPS6KA5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MED12L^ENSG00000144893.12 | chr3:151385191:+ | RPS6KA5^ENSG00000100784.12 | chr14:90978524:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1131:12431:21024 | . | YES_LDAS | 0.0034 | GC | 1.4256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:151385191-chr14:90978524 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MECR--C8orf44 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MECR^ENSG00000116353.16 | chr1:29216005:- | C8orf44^ENSG00000288596.2 | chr8:66679721:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:32972:19889 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr1--chr8]""]" | chr1:29216005-chr8:66679721 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MEAF6--WFIKKN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MEAF6^ENSG00000163875.16 | chr1:37494088:- | WFIKKN1^ENSG00000127578.7 | chr16:633116:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:26864:9590 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:37494088-chr16:633116 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ME1--SNAP91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ME1^ENSG00000065833.9 | chr6:83346173:- | SNAP91^ENSG00000065609.14 | chr6:83560947:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:35431:2934 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9899 | "[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]" | chr6:83346173-chr6:83560947 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ME1--FBXO30 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ME1^ENSG00000065833.9 | chr6:83315310:- | FBXO30^ENSG00000118496.5 | chr6:145806421:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1216:25165:10654 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:62.36Mb]""]" | chr6:83315310-chr6:145806421 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MDM1--LINC01146 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MDM1^ENSG00000111554.14 | chr12:68325441:- | LINC01146^ENSG00000258867.6 | chr14:88066513:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:18021:22999 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:68325441-chr14:88066513 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MCUR1--KDM1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCUR1^ENSG00000050393.11 | chr6:13814015:- | KDM1B^ENSG00000165097.16 | chr6:18185772:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:15562:8595 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr6:4.34Mb]""]" | chr6:13814015-chr6:18185772 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCUB--C5orf64 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCUB^ENSG00000005059.16 | chr4:109560436:+ | C5orf64^ENSG00000178722.13 | chr5:61757477:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2304:33643:2443 | . | NO_LDAS | 0.0034 | GT | 1.3753 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:109560436-chr5:61757477 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MCPH1--RPS10P7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MCPH1^ENSG00000147316.13 | chr8:6414883:+ | RPS10P7^ENSG00000223396.4 | chr1:201530094:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:37049:5876 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr8--chr1]""]" | chr8:6414883-chr1:201530094 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MCF2L2--PARP9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCF2L2^ENSG00000053524.12 | chr3:183298504:- | PARP9^ENSG00000138496.16 | chr3:122552612:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:9664:20519 | . | NO_LDAS | 0.0034 | AT | 1.5628 | AC | 1.8062 | "[""INTRACHROMOSOMAL[chr3:60.61Mb]""]" | chr3:183298504-chr3:122552612 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MCCC1--TCEAL9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCCC1^ENSG00000078070.13 | chr3:183071318:- | TCEAL9^ENSG00000185222.10 | chrX:103357739:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2423:36887:28772 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:183071318-chrX:103357739 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MCAM--IFITM10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MCAM^ENSG00000076706.17 | chr11:119314833:- | IFITM10^ENSG00000244242.2 | chr11:1733751:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:45503:24611 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:117.56Mb]""]" | chr11:119314833-chr11:1733751 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MBTPS2--GK5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MBTPS2^ENSG00000012174.12 | chrX:21853503:+ | GK5^ENSG00000175066.16 | chr3:142213601:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:42380:1126 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:21853503-chr3:142213601 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MBD5--ORC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MBD5^ENSG00000204406.14 | chr2:148342336:+ | ORC4^ENSG00000115947.14 | chr2:147958866:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1406:33004:16133 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[593]""]" | chr2:148342336-chr2:147958866 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MBD5--ATP9B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MBD5^ENSG00000204406.14 | chr2:148178756:+ | ATP9B^ENSG00000166377.20 | chr18:79096546:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2129:19227:14017 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:148178756-chr18:79096546 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MATN1--ACP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MATN1^ENSG00000162510.6 | chr1:30713474:- | ACP1^ENSG00000143727.16 | chr2:271866:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:11638:6423 | . | NO_LDAS | 0.0034 | GT | 1.4716 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:30713474-chr2:271866 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MASP2--TM2D1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MASP2^ENSG00000009724.17 | chr1:11027055:- | TM2D1^ENSG00000162604.12 | chr1:61699578:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2462:45115:8300 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr1:50.63Mb]""]" | chr1:11027055-chr1:61699578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MARK1--AL390957.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MARK1^ENSG00000116141.17 | chr1:220528873:+ | AL390957.1^ENSG00000285280.2 | chr1:192957422:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:30884:22803 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:27.57Mb]""]" | chr1:220528873-chr1:192957422 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MARCHF9--LINC00562 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MARCHF9^ENSG00000139266.6 | chr12:57757084:+ | LINC00562^ENSG00000260388.2 | chr13:47930590:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2301:49257:20435 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:57757084-chr13:47930590 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MARCHF3--C5orf63 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MARCHF3^ENSG00000173926.6 | chr5:126914930:- | C5orf63^ENSG00000164241.13 | chr5:127047915:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:43861:3242 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12000]""]" | chr5:126914930-chr5:127047915 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAPK8IP2--EFNA3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAPK8IP2^ENSG00000008735.14 | chr22:50606765:+ | EFNA3^ENSG00000143590.14 | chr1:155085338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2453:25472:20575 | . | NO_LDAS | 0.0034 | GT | 1.371 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr22--chr1]""]" | chr22:50606765-chr1:155085338 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| MAP3K14-AS1--AC106799.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAP3K14-AS1^ENSG00000267278.6 | chr17:45255218:+ | AC106799.2^ENSG00000248973.3 | chr5:4657565:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1177:35116:3004 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr5]""]" | chr17:45255218-chr5:4657565 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MAP3K13--AC020629.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP3K13^ENSG00000073803.14 | chr3:185285643:+ | AC020629.1^ENSG00000257674.1 | chr12:42287199:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1437:44435:21612 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:185285643-chr12:42287199 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAP2K5--SKOR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP2K5^ENSG00000137764.20 | chr15:67806981:+ | SKOR1^ENSG00000188779.12 | chr15:67825936:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:50907:29571 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6729 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr15:0.01Mb]"",""NEIGHBORS[12587]""]" | chr15:67806981-chr15:67825936 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| MAP1LC3B2--PHF5A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP1LC3B2^ENSG00000258102.5 | chr12:116576060:+ | PHF5A^ENSG00000100410.8 | chr22:41467525:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1478:48998:21360 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr22]""]" | chr12:116576060-chr22:41467525 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAP1LC3B2--FAXC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | MAP1LC3B2^ENSG00000258102.5 | chr12:116576060:+ | FAXC^ENSG00000146267.12 | chr6:99349228:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2490:27915:6703 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:116576060-chr6:99349228 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MACROD2--AC066613.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MACROD2^ENSG00000172264.17 | chr20:14002404:+ | AC066613.1^ENSG00000259668.6 | chr15:51458720:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2201:30164:7600 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:14002404-chr15:51458720 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MAB21L3--SLC22A15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | MAB21L3^ENSG00000173212.4 | chr1:116128339:+ | SLC22A15^ENSG00000163393.13 | chr1:116062762:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:48658:24274 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[41701]""]" | chr1:116128339-chr1:116062762 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LZIC--SLIT3-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LZIC^ENSG00000162441.12 | chr1:9932858:- | SLIT3-AS1^ENSG00000248222.5 | chr5:169026433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:49491:16301 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:9932858-chr5:169026433 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LYST--TBX4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYST^ENSG00000143669.14 | chr1:235755478:- | TBX4^ENSG00000121075.11 | chr17:61481812:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2161:9559:27399 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:235755478-chr17:61481812 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYRM7--CDC42SE2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYRM7^ENSG00000186687.16 | chr5:131171038:+ | CDC42SE2^ENSG00000158985.14 | chr5:131315976:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:46547:14676 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[40065]""]" | chr5:131171038-chr5:131315976 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYRM2--CYB5R4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LYRM2^ENSG00000083099.11 | chr6:89637674:- | CYB5R4^ENSG00000065615.14 | chr6:83963596:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2353:22948:4937 | . | NO_LDAS | 0.0034 | GT | 0.8366 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:5.60Mb]""]" | chr6:89637674-chr6:83963596 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LYPLA2--H3-2 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | LYPLA2^ENSG00000011009.11 | chr1:23794530:+ | H3-2^ENSG00000273213.3 | chr1:143905936:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:10959:29403 | . | YES_LDAS | 0.0007 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:120.10Mb]""]" | chr1:23794530-chr1:143905936 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYPLA1--RGS20 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LYPLA1^ENSG00000120992.18 | chr8:54062254:- | RGS20^ENSG00000147509.14 | chr8:53913497:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:23854:1799 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.09Mb]"",""LOCAL_INVERSION:-:+:[87064]""]" | chr8:54062254-chr8:53913497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYN--CHCHD4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LYN^ENSG00000254087.8 | chr8:55950784:+ | CHCHD4^ENSG00000163528.13 | chr3:14112344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2248:34743:29151 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr3]""]" | chr8:55950784-chr3:14112344 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LYAR--AK9 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | LYAR^ENSG00000145220.14 | chr4:4274421:- | AK9^ENSG00000155085.15 | chr6:109659256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:11064:9323 | . | YES_LDAS | 0.0007 | GT | 1.585 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:4274421-chr6:109659256 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LUCAT1--SNRK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LUCAT1^ENSG00000248323.7 | chr5:91207633:- | SNRK^ENSG00000163788.14 | chr3:43332169:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:27131:18768 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:91207633-chr3:43332169 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LUCAT1--PIGL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LUCAT1^ENSG00000248323.7 | chr5:91313638:- | PIGL^ENSG00000108474.17 | chr17:16299888:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:43748:27735 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr17]""]" | chr5:91313638-chr17:16299888 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LSP1--KLHL18 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LSP1^ENSG00000130592.17 | chr11:1881320:+ | KLHL18^ENSG00000114648.12 | chr3:47340586:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2198:40528:20085 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:1881320-chr3:47340586 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LSM10--GNL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LSM10^ENSG00000181817.6 | chr1:36397767:- | GNL2^ENSG00000134697.13 | chr1:37587495:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2263:15813:22985 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:1.17Mb]""]" | chr1:36397767-chr1:37587495 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC8D--ZNF326 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC8D^ENSG00000171492.14 | chr1:89846658:+ | ZNF326^ENSG00000162664.17 | chr1:89998110:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1157:26500:20421 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.06Mb]"",""NEIGHBORS[58499]""]" | chr1:89846658-chr1:89998110 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| LRRC75B--FPR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC75B^ENSG00000178026.13 | chr22:24588214:- | FPR2^ENSG00000171049.9 | chr19:51762417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:16848:25760 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr22--chr19]""]" | chr22:24588214-chr19:51762417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC45--TGM6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC45^ENSG00000169683.8 | chr17:82024763:+ | TGM6^ENSG00000166948.10 | chr20:2394561:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:41401:22411 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr20]""]" | chr17:82024763-chr20:2394561 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC37B--AC006441.5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC37B^ENSG00000185158.12 | chr17:32018004:+ | AC006441.5^ENSG00000277426.1 | chr17:39026691:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:41037:26264 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr17:6.97Mb]""]" | chr17:32018004-chr17:39026691 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC37A9P--RDM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRRC37A9P^ENSG00000271013.1 | chr17:35917512:- | RDM1^ENSG00000278023.7 | chr17:35930255:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:3880:28912 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[56]""]" | chr17:35917512-chr17:35930255 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRRC23--INTU | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | LRRC23^ENSG00000010626.15 | chr12:6907445:+ | INTU^ENSG00000164066.13 | chr4:127632959:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:39565:7067 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:6907445-chr4:127632959 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRRC1--FAM83B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRRC1^ENSG00000137269.15 | chr6:53795415:+ | FAM83B^ENSG00000168143.9 | chr6:54870187:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2278:33417:28366 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr6:0.92Mb]""]" | chr6:53795415-chr6:54870187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRR1--BRCA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRR1^ENSG00000165501.17 | chr14:49602468:+ | BRCA1^ENSG00000012048.23 | chr17:43045802:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:26734:17605 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:49602468-chr17:43045802 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRP5L--DNAL4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRP5L^ENSG00000100068.14 | chr22:25351704:- | DNAL4^ENSG00000100246.13 | chr22:38779613:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1155:44597:24779 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr22:13.37Mb]""]" | chr22:25351704-chr22:38779613 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRIG1--LRIG3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRIG1^ENSG00000144749.14 | chr3:66382982:- | LRIG3^ENSG00000139263.12 | chr12:58876603:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2226:16622:25648 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:66382982-chr12:58876603 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| LRCH4--GPR35 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LRCH4^ENSG00000077454.16 | chr7:100577822:- | GPR35^ENSG00000178623.12 | chr2:240630106:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2441:24712:20715 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr2]""]" | chr7:100577822-chr2:240630106 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LRCH1--SPRY2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRCH1^ENSG00000136141.15 | chr13:46553703:+ | SPRY2^ENSG00000136158.12 | chr13:80337756:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:33053:11341 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr13:33.58Mb]""]" | chr13:46553703-chr13:80337756 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LRAT--RBM46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LRAT^ENSG00000121207.12 | chr4:154744866:+ | RBM46^ENSG00000151962.8 | chr4:154796742:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2295:48472:6269 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""NEIGHBORS[28093]""]" | chr4:154744866-chr4:154796742 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LPAR3--MCOLN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LPAR3^ENSG00000171517.6 | chr1:84865385:- | MCOLN2^ENSG00000153898.13 | chr1:84947132:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2275:26621:14998 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[32377]""]" | chr1:84865385-chr1:84947132 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LNCSRLR--PLOD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LNCSRLR^ENSG00000240032.1 | chr3:146066435:- | PLOD2^ENSG00000152952.12 | chr3:146124229:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2239:35698:7992 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[255]""]" | chr3:146066435-chr3:146124229 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LMO7--UCHL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LMO7^ENSG00000136153.20 | chr13:75623320:+ | UCHL3^ENSG00000118939.18 | chr13:75594915:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:5085:14634 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9219 | "[""Klijn_CellLines"",""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14414]""]" | chr13:75623320-chr13:75594915 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIX1-AS1--LINC01340 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIX1-AS1^ENSG00000251513.2 | chr5:97431900:+ | LINC01340^ENSG00000250331.2 | chr5:97668551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1368:24510:11509 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8323 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""NEIGHBORS[67446]""]" | chr5:97431900-chr5:97668551 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LITAF--AC099489.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LITAF^ENSG00000189067.14 | chr16:11553533:- | AC099489.1^ENSG00000188897.9 | chr16:11522112:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2380:20877:19174 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[20477]""]" | chr16:11553533-chr16:11522112 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LIPH--LNP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIPH^ENSG00000163898.10 | chr3:185552423:- | LNP1^ENSG00000206535.8 | chr3:100429697:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:37397:10150 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:85.05Mb]""]" | chr3:185552423-chr3:100429697 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIPG--NGLY1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LIPG^ENSG00000101670.12 | chr18:49593150:+ | NGLY1^ENSG00000151092.18 | chr3:25767907:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2430:21969:4363 | . | YES_LDAS | 0.0034 | GC | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr18--chr3]""]" | chr18:49593150-chr3:25767907 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINS1--ST8SIA1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINS1^ENSG00000140471.17 | chr15:100580263:- | ST8SIA1^ENSG00000111728.11 | chr12:22150234:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:100580263-chr12:22150234 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINS1--AL589740.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINS1^ENSG00000140471.17 | chr15:100580263:- | AL589740.1^ENSG00000271860.7 | chr6:97612168:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269 | . | NO_LDAS | 0.0017 | GT | 1.6402 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:100580263-chr6:97612168 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02883--KLHL25 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02883^ENSG00000259416.2 | chr15:85755822:- | KLHL25^ENSG00000183655.13 | chr15:85769820:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1160:10182:17072 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3089]""]" | chr15:85755822-chr15:85769820 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LINC02882--CD83 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02882^ENSG00000251138.7 | chr12:74157790:- | CD83^ENSG00000112149.10 | chr6:14117950:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:29517:15867 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:74157790-chr6:14117950 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02827--DBNDD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02827^ENSG00000236908.2 | chr12:3319726:+ | DBNDD2^ENSG00000244274.8 | chr20:45408460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2282:15732:9786 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:3319726-chr20:45408460 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02728--NARS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02728^ENSG00000251323.3 | chr11:78425337:- | NARS2^ENSG00000137513.10 | chr11:78571444:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2144:4511:8735 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[6132]""]" | chr11:78425337-chr11:78571444 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02643--NEBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02643^ENSG00000230109.1 | chr10:21369967:- | NEBL^ENSG00000078114.19 | chr10:21020201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1289:20643:17591 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr10:0.05Mb]"",""NEIGHBORS[47222]""]" | chr10:21369967-chr10:21020201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02643--NEBL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02643^ENSG00000230109.1 | chr10:21340142:- | NEBL^ENSG00000078114.19 | chr10:21020201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:6275:7193 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr10:0.05Mb]"",""NEIGHBORS[47222]""]" | chr10:21340142-chr10:21020201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02608--INTS7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02608^ENSG00000226251.6 | chr1:212214699:- | INTS7^ENSG00000143493.13 | chr1:212021212:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:45616:14886 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr1:0.19Mb]""]" | chr1:212214699-chr1:212021212 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02595--TCAIM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02595^ENSG00000231566.2 | chrX:45849375:- | TCAIM^ENSG00000179152.20 | chr3:44354739:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2406:23943:7586 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:45849375-chr3:44354739 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02595--RBM41 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02595^ENSG00000231566.2 | chrX:45849375:- | RBM41^ENSG00000089682.16 | chrX:107069402:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2124:43408:22215 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chrX:61.21Mb]""]" | chrX:45849375-chrX:107069402 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02595--IL1RAPL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02595^ENSG00000231566.2 | chrX:45849375:- | IL1RAPL1^ENSG00000169306.10 | chrX:29954522:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:17342:10640 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chrX:15.89Mb]""]" | chrX:45849375-chrX:29954522 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02595--GATM | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC02595^ENSG00000231566.2 | chrX:45847895:- | GATM^ENSG00000171766.17 | chr15:45363257:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:6970:11705 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chrX--chr15]""]" | chrX:45847895-chr15:45363257 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02356--FAM120B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02356^ENSG00000257595.3 | chr12:111369320:+ | FAM120B^ENSG00000112584.14 | chr6:170317370:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:5822:9800 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr6]""]" | chr12:111369320-chr6:170317370 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02108--COA1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC02108^ENSG00000250127.1 | chr5:58547135:- | COA1^ENSG00000106603.19 | chr7:43650712:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:36750:5806 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:58547135-chr7:43650712 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC02043--GRAMD1C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC02043^ENSG00000232233.1 | chr3:186823545:- | GRAMD1C^ENSG00000178075.20 | chr3:113901031:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:19817:1392 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:72.86Mb]""]" | chr3:186823545-chr3:113901031 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01968--COX10 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01968^ENSG00000237222.4 | chr3:194768472:+ | COX10^ENSG00000006695.12 | chr17:14191989:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:49483:29627 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr17]""]" | chr3:194768472-chr17:14191989 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC01778--ATL3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01778^ENSG00000223382.5 | chr1:30826652:+ | ATL3^ENSG00000184743.13 | chr11:63636334:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:29695:9085 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:30826652-chr11:63636334 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01721--RAB28 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01721^ENSG00000230133.2 | chr20:24219702:+ | RAB28^ENSG00000157869.16 | chr4:13479526:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:7221:23798 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr20--chr4]""]" | chr20:24219702-chr4:13479526 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01696--TMEM106C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01696^ENSG00000227940.2 | chr1:209327275:+ | TMEM106C^ENSG00000134291.12 | chr12:47967208:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:7068:17058 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:209327275-chr12:47967208 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC01572--C16orf46 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01572^ENSG00000261008.7 | chr16:72664892:- | C16orf46^ENSG00000166455.14 | chr16:81062138:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:37138:12168 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr16:8.39Mb]""]" | chr16:72664892-chr16:81062138 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01517--BCCIP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01517^ENSG00000232624.8 | chr10:28808054:+ | BCCIP^ENSG00000107949.17 | chr10:125841283:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2433:10951:8090 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr10:96.89Mb]""]" | chr10:28808054-chr10:125841283 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC01473--SCOC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01473^ENSG00000237877.7 | chr2:186178599:- | SCOC^ENSG00000153130.18 | chr4:140379121:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1458:7326:13499 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:186178599-chr4:140379121 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01128--PPP6C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC01128^ENSG00000228794.10 | chr1:829104:+ | PPP6C^ENSG00000119414.12 | chr9:125160906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1173:5506:22705 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr1--chr9]""]" | chr1:829104-chr9:125160906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC01018--SPEF2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC01018^ENSG00000250056.8 | chr5:6588659:+ | SPEF2^ENSG00000152582.14 | chr5:35628460:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1351:25658:10837 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr5:29.02Mb]""]" | chr5:6588659-chr5:35628460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC00896--POFUT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC00896^ENSG00000236499.2 | chr22:20206464:+ | POFUT2^ENSG00000186866.17 | chr21:45277142:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:43772:16203 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr21]""]" | chr22:20206464-chr21:45277142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00894--HSFX3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC00894^ENSG00000235703.6 | chrX:149960948:+ | HSFX3^ENSG00000283697.3 | chrX:149548910:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:39120:22999 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chrX:0.39Mb]""]" | chrX:149960948-chrX:149548910 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00894--HSFX3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC00894^ENSG00000235703.6 | chrX:149948394:+ | HSFX3^ENSG00000283697.3 | chrX:149548910:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1446:26621:14130 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chrX:0.39Mb]""]" | chrX:149948394-chrX:149548910 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00705--RAB28 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC00705^ENSG00000225269.3 | chr10:4659348:+ | RAB28^ENSG00000157869.16 | chr4:13381594:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2238:47340:21850 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:4659348-chr4:13381594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00598--C1orf112 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC00598^ENSG00000215483.11 | chr13:40473994:- | C1orf112^ENSG00000000460.17 | chr1:169827051:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:28247:16329 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:40473994-chr1:169827051 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00426--ASTN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC00426^ENSG00000238121.6 | chr13:30367601:- | ASTN2^ENSG00000148219.18 | chr9:116620443:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:25124:7810 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr13--chr9]""]" | chr13:30367601-chr9:116620443 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00265--RAB28 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | LINC00265^ENSG00000188185.13 | chr7:39781351:+ | RAB28^ENSG00000157869.16 | chr4:13381594:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2238:47340:21850 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr7--chr4]""]" | chr7:39781351-chr4:13381594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC00115--AC240565.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LINC00115^ENSG00000225880.5 | chr1:827484:- | AC240565.1^ENSG00000280136.2 | chr17:106864:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2457:45859:8160 | . | YES_LDAS | 0.0008 | GT | 1.8323 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:827484-chr17:106864 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LINC-PINT--TSPAN9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LINC-PINT^ENSG00000231721.7 | chr7:130941413:- | TSPAN9^ENSG00000011105.14 | chr12:3201177:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:32527:15419 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr7--chr12]""]" | chr7:130941413-chr12:3201177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LINC-PINT--CHM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LINC-PINT^ENSG00000231721.7 | chr7:130945720:- | CHM^ENSG00000188419.14 | chrX:85964052:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2286:26678:7866 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr7--chrX]""]" | chr7:130945720-chrX:85964052 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIN7C--NIPA2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIN7C^ENSG00000148943.12 | chr11:27506716:- | NIPA2^ENSG00000140157.16 | chr15:22858540:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:33894:13779 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:27506716-chr15:22858540 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LIN52--NRIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LIN52^ENSG00000205659.11 | chr14:74198973:+ | NRIP1^ENSG00000180530.11 | chr21:15065893:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2418:1356:23728 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr21]""]" | chr14:74198973-chr21:15065893 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LIMS1--AC004232.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | LIMS1^ENSG00000169756.16 | chr2:108685997:+ | AC004232.1^ENSG00000262899.1 | chr16:3307736:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1414:13370:26152 | . | NO_LDAS | 0.0011 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:108685997-chr16:3307736 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LILRB1--AC245884.12 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | LILRB1^ENSG00000104972.15 | chr19:54633318:+ | AC245884.12^ENSG00000276758.1 | chr19:54296252:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:11339:6157 | . | YES_LDAS | 0.0011 | GT | 1.9329 | AG | 1.8256 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr19:0.32Mb]""]" | chr19:54633318-chr19:54296252 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| LIAS--LINC00674 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LIAS^ENSG00000121897.15 | chr4:39466117:+ | LINC00674^ENSG00000237854.3 | chr17:68114422:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:22495:18810 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:39466117-chr17:68114422 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| LHB--LRRC45 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | LHB^ENSG00000104826.15 | chr19:49016570:- | LRRC45^ENSG00000169683.8 | chr17:82029002:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2261:16201:28702 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr17]""]" | chr19:49016570-chr17:82029002 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| LGMN--LAMP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LGMN^ENSG00000100600.15 | chr14:92741062:- | LAMP3^ENSG00000078081.8 | chr3:183124214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1372:38206:26292 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:92741062-chr3:183124214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LAP3--SLC4A8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LAP3^ENSG00000002549.13 | chr4:17588977:+ | SLC4A8^ENSG00000050438.17 | chr12:51485787:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:5247:28646 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:17588977-chr12:51485787 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LAMP2--AL136126.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | LAMP2^ENSG00000005893.16 | chrX:120455442:- | AL136126.1^ENSG00000241255.1 | chr11:33237212:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1477:22366:15895 | . | YES_LDAS | 0.0008 | GC | 1.9656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrX--chr11]""]" | chrX:120455442-chr11:33237212 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| LACTB--ZFAND6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | LACTB^ENSG00000103642.12 | chr15:63127689:+ | ZFAND6^ENSG00000086666.19 | chr15:80120328:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:5377:20575 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr15:16.92Mb]""]" | chr15:63127689-chr15:80120328 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KRTAP2-3--GATA4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP2-3^ENSG00000212724.3 | chr17:41059612:- | GATA4^ENSG00000136574.18 | chr8:11759101:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1413:45091:13107 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:41059612-chr8:11759101 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRTAP12-1--NSMAF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRTAP12-1^ENSG00000187175.5 | chr21:44682032:- | NSMAF^ENSG00000035681.9 | chr8:58599363:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:13159:15559 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr21--chr8]""]" | chr21:44682032-chr8:58599363 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRT8P42--AP000487.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT8P42^ENSG00000220378.3 | chr6:134298185:- | AP000487.1^ENSG00000246889.2 | chr11:70374620:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1294:4398:6409 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:134298185-chr11:70374620 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRT42P--OGDHL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KRT42P^ENSG00000214514.8 | chr17:41634536:- | OGDHL^ENSG00000197444.10 | chr10:49752740:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:41474:27357 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr17--chr10]""]" | chr17:41634536-chr10:49752740 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KRT18P59--KRT18P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT18P59^ENSG00000187686.4 | chr11:125114679:+ | KRT18P1^ENSG00000228666.1 | chr6:28969307:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2166:40253:25381 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr6]""]" | chr11:125114679-chr6:28969307 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRT18P55--IAH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KRT18P55^ENSG00000265480.5 | chr17:28307135:- | IAH1^ENSG00000134330.19 | chr2:9474582:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1438:42971:28969 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:28307135-chr2:9474582 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KRR1--NIPA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KRR1^ENSG00000111615.14 | chr12:75511513:- | NIPA1^ENSG00000170113.16 | chr15:22810749:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:51255:2177 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr15]""]" | chr12:75511513-chr15:22810749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KNDC1--DDX60L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KNDC1^ENSG00000171798.18 | chr10:133168312:+ | DDX60L^ENSG00000181381.14 | chr4:168441492:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:50915:26138 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr4]""]" | chr10:133168312-chr4:168441492 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KLRG1--LINC00987 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KLRG1^ENSG00000139187.10 | chr12:9009513:+ | LINC00987^ENSG00000237248.5 | chr12:9240285:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2196:9147:4573 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr12:0.23Mb]""]" | chr12:9009513-chr12:9240285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KLRC4--KLRK1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KLRC4^ENSG00000183542.5 | chr12:10407636:- | KLRK1^ENSG00000213809.9 | chr12:10388875:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:8677:16764 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9219 | "[""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr12:0.02Mb]"",""NEIGHBORS[15508]""]" | chr12:10407636-chr12:10388875 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| KLHL9--DBF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KLHL9^ENSG00000198642.7 | chr9:21332906:- | DBF4^ENSG00000006634.8 | chr7:87886844:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1181:21225:4811 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr9--chr7]""]" | chr9:21332906-chr7:87886844 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KLHDC10--TMEM209 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KLHDC10^ENSG00000128607.14 | chr7:130116666:+ | TMEM209^ENSG00000146842.17 | chr7:130192823:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:10781:22621 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_INVERSION:+:-:[29008]""]" | chr7:130116666-chr7:130192823 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIF24--ITM2B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KIF24^ENSG00000186638.16 | chr9:34254004:- | ITM2B^ENSG00000136156.15 | chr13:48253890:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1244:5636:19959 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr13]""]" | chr9:34254004-chr13:48253890 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIF13A--NR3C2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIF13A^ENSG00000137177.20 | chr6:17898168:- | NR3C2^ENSG00000151623.15 | chr4:148152613:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1364:5741:14984 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr4]""]" | chr6:17898168-chr4:148152613 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIAA2026--TMEM151B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KIAA2026^ENSG00000183354.12 | chr9:6007652:- | TMEM151B^ENSG00000178233.18 | chr6:44276378:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:8410:4279 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr9--chr6]""]" | chr9:6007652-chr6:44276378 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KIAA1328--ATP9B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA1328^ENSG00000150477.15 | chr18:36835376:+ | ATP9B^ENSG00000166377.20 | chr18:79143802:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:41377:14830 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr18:41.84Mb]""]" | chr18:36835376-chr18:79143802 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KIAA0825--FAM172A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KIAA0825^ENSG00000185261.14 | chr5:94384368:- | FAM172A^ENSG00000113391.19 | chr5:94074769:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:5805:19328 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[41267]""]" | chr5:94384368-chr5:94074769 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| KHDRBS3--HACE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KHDRBS3^ENSG00000131773.14 | chr8:135582073:+ | HACE1^ENSG00000085382.12 | chr6:104777317:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1382:19494:2093 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr8--chr6]""]" | chr8:135582073-chr6:104777317 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCTD9P2--AC091185.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KCTD9P2^ENSG00000181819.14 | chrX:105406795:+ | AC091185.1^ENSG00000253476.1 | chr8:25426327:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:38360:11061 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr8]""]" | chrX:105406795-chr8:25426327 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCTD13--PCNX4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KCTD13^ENSG00000174943.11 | chr16:29923190:- | PCNX4^ENSG00000126773.13 | chr14:60115719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:2594:5386 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr14]""]" | chr16:29923190-chr14:60115719 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNS2--CIB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNS2^ENSG00000156486.8 | chr8:98428740:+ | CIB2^ENSG00000136425.14 | chr15:78123739:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:16225:21290 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr8--chr15]""]" | chr8:98428740-chr15:78123739 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KCNQ1--AP001282.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | KCNQ1^ENSG00000053918.18 | chr11:2528018:+ | AP001282.1^ENSG00000213252.3 | chr11:106826778:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:46870:26530 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr11:103.98Mb]""]" | chr11:2528018-chr11:106826778 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNMB2-AS1--ZMAT3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KCNMB2-AS1^ENSG00000237978.6 | chr3:178801793:- | ZMAT3^ENSG00000172667.11 | chr3:179004184:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:16274:26446 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[22769]""]" | chr3:178801793-chr3:179004184 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNMB2-AS1--PPIAP75 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNMB2-AS1^ENSG00000237978.6 | chr3:178748429:- | PPIAP75^ENSG00000271131.1 | chr3:178493847:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1262:19793:23686 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""NEIGHBORS[32695]""]" | chr3:178748429-chr3:178493847 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KCNB1--RAB18 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNB1^ENSG00000158445.10 | chr20:49295736:- | RAB18^ENSG00000099246.17 | chr10:27533948:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:30148:28842 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr20--chr10]""]" | chr20:49295736-chr10:27533948 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KCNA6--SNX31 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | KCNA6^ENSG00000151079.7 | chr12:4812828:+ | SNX31^ENSG00000174226.9 | chr8:100584134:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:33999:5106 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:4812828-chr8:100584134 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| KATNBL1--PDLIM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KATNBL1^ENSG00000134152.11 | chr15:34148632:- | PDLIM1^ENSG00000107438.9 | chr10:95247366:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2232:13920:9309 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:34148632-chr10:95247366 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KATNAL2--EPG5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KATNAL2^ENSG00000167216.17 | chr18:46946923:+ | EPG5^ENSG00000152223.15 | chr18:45855687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2393:42615:28716 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr18:0.95Mb]""]" | chr18:46946923-chr18:45855687 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| KANK1--IL17RE | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | KANK1^ENSG00000107104.20 | chr9:473273:+ | IL17RE^ENSG00000163701.19 | chr3:9906364:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:22892:3522 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr9--chr3]""]" | chr9:473273-chr3:9906364 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JPH1--JPH4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | JPH1^ENSG00000104369.5 | chr8:74237208:- | JPH4^ENSG00000092051.17 | chr14:23576456:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:74237208-chr14:23576456 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JPH1--JPH3 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | JPH1^ENSG00000104369.5 | chr8:74237208:- | JPH3^ENSG00000154118.13 | chr16:87644258:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr8--chr16]""]" | chr8:74237208-chr16:87644258 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| JAZF1--AL023775.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | JAZF1^ENSG00000153814.13 | chr7:28180463:- | AL023775.1^ENSG00000235008.1 | chr6:166702664:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2370:48755:15783 | . | NO_LDAS | 0.0017 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr6]""]" | chr7:28180463-chr6:166702664 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| JADE1--AC023813.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | JADE1^ENSG00000077684.16 | chr4:128861987:+ | AC023813.4^ENSG00000272545.1 | chr16:48640557:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:44265:17843 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr4--chr16]""]" | chr4:128861987-chr16:48640557 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ITPA--NEK4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITPA^ENSG00000125877.13 | chr20:3214062:+ | NEK4^ENSG00000114904.13 | chr3:52760877:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:7302:22257 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:3214062-chr3:52760877 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ITM2B--CDX2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ITM2B^ENSG00000136156.15 | chr13:48253936:+ | CDX2^ENSG00000165556.10 | chr13:27965015:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2377:3807:28086 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr13:20.26Mb]""]" | chr13:48253936-chr13:27965015 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ITGA2B--LPIN2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ITGA2B^ENSG00000005961.19 | chr17:44384408:- | LPIN2^ENSG00000101577.10 | chr18:2927929:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2280:34242:7992 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr18]""]" | chr17:44384408-chr18:2927929 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ISY1--ACSS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ISY1^ENSG00000240682.10 | chr3:129130550:- | ACSS1^ENSG00000154930.15 | chr20:25012826:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:1534:27511 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:129130550-chr20:25012826 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IRF5--INSYN2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IRF5^ENSG00000128604.20 | chr7:128947357:+ | INSYN2A^ENSG00000188916.9 | chr10:127175581:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1204:1777:9239 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:128947357-chr10:127175581 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IRAK4--SRP9P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IRAK4^ENSG00000198001.14 | chr12:43768272:+ | SRP9P1^ENSG00000180581.7 | chr10:91807445:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1165:23037:18347 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:43768272-chr10:91807445 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IQCK--ZNF804B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IQCK^ENSG00000174628.16 | chr16:19735450:+ | ZNF804B^ENSG00000182348.7 | chr7:89338518:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1347:33336:14746 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:19735450-chr7:89338518 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IQCH-AS1--AC108471.3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IQCH-AS1^ENSG00000259673.6 | chr15:67519000:- | AC108471.3^ENSG00000286349.1 | chr4:39615146:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:33587:12714 | . | YES_LDAS | 0.0017 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr4]""]" | chr15:67519000-chr4:39615146 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| IQCB1--C12orf45 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IQCB1^ENSG00000173226.17 | chr3:121826051:- | C12orf45^ENSG00000151131.11 | chr12:105012752:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1372:3815:1504 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:121826051-chr12:105012752 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IPP--AD001527.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IPP^ENSG00000197429.11 | chr1:45727631:- | AD001527.1^ENSG00000270760.1 | chr19:36148044:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:22851:6899 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:45727631-chr19:36148044 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IPO11--SREK1IP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IPO11^ENSG00000086200.17 | chr5:62412929:+ | SREK1IP1^ENSG00000153006.16 | chr5:64741200:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:30229:15615 | . | NO_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr5:2.09Mb]""]" | chr5:62412929-chr5:64741200 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INTS7--ZDBF2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | INTS7^ENSG00000143493.13 | chr1:211952569:- | ZDBF2^ENSG00000204186.10 | chr2:206305624:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2206:35132:18950 | . | YES_LDAS | 0.0034 | GC | 1.7232 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:211952569-chr2:206305624 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INTS7--GGPS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INTS7^ENSG00000143493.13 | chr1:212035344:- | GGPS1^ENSG00000152904.11 | chr1:235335242:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2105:10295:15503 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:23.29Mb]""]" | chr1:212035344-chr1:235335242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INPP5B--ALG11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INPP5B^ENSG00000204084.13 | chr1:37880085:- | ALG11^ENSG00000253710.5 | chr13:52023713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1368:44298:2625 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr13]""]" | chr1:37880085-chr13:52023713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| INIP--GAS2L3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | INIP^ENSG00000148153.14 | chr9:112716461:- | GAS2L3^ENSG00000139354.11 | chr12:100591736:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2290:43926:5988 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:112716461-chr12:100591736 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ING4--SUPV3L1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ING4^ENSG00000111653.20 | chr12:6652271:- | SUPV3L1^ENSG00000156502.14 | chr10:69198372:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2253:2877:12658 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:6652271-chr10:69198372 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ING3--WDR91 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ING3^ENSG00000071243.16 | chr7:120955624:+ | WDR91^ENSG00000105875.14 | chr7:135209755:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1147:29323:7796 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr7:14.21Mb]""]" | chr7:120955624-chr7:135209755 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IMPDH1--AC004623.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMPDH1^ENSG00000106348.18 | chr7:128409756:- | AC004623.1^ENSG00000279488.1 | chr19:1373884:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:29291:3844 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:128409756-chr19:1373884 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IMPDH1--AC004623.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMPDH1^ENSG00000106348.18 | chr7:128409289:- | AC004623.1^ENSG00000279488.1 | chr19:1373884:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2489:30423:5498 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:128409289-chr19:1373884 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IMMP1L--ZNF607 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IMMP1L^ENSG00000148950.11 | chr11:31488128:- | ZNF607^ENSG00000198182.13 | chr19:37711692:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2161:29598:17857 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:31488128-chr19:37711692 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ILRUN--TMCO4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ILRUN^ENSG00000196821.10 | chr6:34588913:- | TMCO4^ENSG00000162542.14 | chr1:19682807:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:46215:12981 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:34588913-chr1:19682807 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IL7--AC068700.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL7^ENSG00000104432.14 | chr8:78798128:- | AC068700.2^ENSG00000286675.1 | chr8:78630426:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:3508:29389 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[9761]""]" | chr8:78798128-chr8:78630426 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| IL22RA1--SMAP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IL22RA1^ENSG00000142677.4 | chr1:24137127:- | SMAP2^ENSG00000084070.12 | chr1:40414172:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1107:42939:1897 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr1:16.20Mb]""]" | chr1:24137127-chr1:40414172 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IL15RA--AC109630.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | IL15RA^ENSG00000134470.21 | chr10:5977405:- | AC109630.1^ENSG00000259269.2 | chr15:39496646:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:41588:29011 | . | NO_LDAS | 0.0017 | GT | 1.2729 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:5977405-chr15:39496646 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IL10RB--IFNAR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL10RB^ENSG00000243646.10 | chr21:33288261:+ | IFNAR2^ENSG00000159110.20 | chr21:33241886:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:31928:2107 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.6729 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr21:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[692]""]" | chr21:33288261-chr21:33241886 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| IL10RB--IFNAR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IL10RB^ENSG00000243646.10 | chr21:33283241:+ | IFNAR2^ENSG00000159110.20 | chr21:33241840:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1327:30156:8174 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.6895 | "[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr21:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[692]""]" | chr21:33283241-chr21:33241840 | False | 0 | Excluded | annotation | pattern: | DGD_PARALOGS | FAIL | 1 | ||||||
| IKBKB--DDHD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IKBKB^ENSG00000104365.16 | chr8:42272205:+ | DDHD2^ENSG00000085788.14 | chr8:38247713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1169:26670:4657 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr8:4.00Mb]""]" | chr8:42272205-chr8:38247713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT88--RRN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT88^ENSG00000032742.18 | chr13:20598753:+ | RRN3^ENSG00000085721.13 | chr16:15073080:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:39225:21640 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:20598753-chr16:15073080 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT80--ABCB10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT80^ENSG00000068885.15 | chr3:160399146:- | ABCB10^ENSG00000135776.5 | chr1:229549434:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1482:21395:1350 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:160399146-chr1:229549434 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT57--EPS8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT57^ENSG00000114446.5 | chr3:108167793:- | EPS8^ENSG00000151491.14 | chr12:15647260:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2442:15967:24429 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr12]""]" | chr3:108167793-chr12:15647260 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IFT43--TTC22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IFT43^ENSG00000119650.13 | chr14:76059373:+ | TTC22^ENSG00000006555.11 | chr1:54782444:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:34226:10907 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr14--chr1]""]" | chr14:76059373-chr1:54782444 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| IFT122--MAGT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | IFT122^ENSG00000163913.12 | chr3:129458015:+ | MAGT1^ENSG00000102158.20 | chrX:77870925:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2351:48561:6423 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:129458015-chrX:77870925 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| IDS--VWA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | IDS^ENSG00000010404.18 | chrX:149504271:- | VWA1^ENSG00000179403.12 | chr1:1437436:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1206:17220:6787 | . | NO_LDAS | 0.0034 | AT | 1.7819 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr1]""]" | chrX:149504271-chr1:1437436 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HYAL3--UBLCP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HYAL3^ENSG00000186792.17 | chr3:50293431:- | UBLCP1^ENSG00000164332.8 | chr5:159283278:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2358:14632:8581 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:50293431-chr5:159283278 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HTR7P1--DDX60L | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HTR7P1^ENSG00000183935.5 | chr12:13001008:+ | DDX60L^ENSG00000181381.14 | chr4:168415799:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1363:47283:15026 | . | NO_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr12--chr4]""]" | chr12:13001008-chr4:168415799 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HTR7--LINC02653 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HTR7^ENSG00000148680.16 | chr10:90720027:- | LINC02653^ENSG00000236373.2 | chr10:90543450:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1148:43222:8833 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:0.11Mb]""]" | chr10:90720027-chr10:90543450 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HTD2--PDHB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HTD2^ENSG00000255154.9 | chr3:58310606:+ | PDHB^ENSG00000168291.13 | chr3:58431203:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2303:41393:13541 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr3:0.11Mb]""]" | chr3:58310606-chr3:58431203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HSPH1--WDFY2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSPH1^ENSG00000120694.20 | chr13:31154633:- | WDFY2^ENSG00000139668.9 | chr13:51759740:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2178:47000:15180 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr13:20.42Mb]""]" | chr13:31154633-chr13:51759740 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HSPH1--ELAPOR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSPH1^ENSG00000120694.20 | chr13:31149954:- | ELAPOR1^ENSG00000116299.17 | chr1:109204068:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:40503:21892 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr1]""]" | chr13:31149954-chr1:109204068 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSPE1--NBN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HSPE1^ENSG00000115541.11 | chr2:197501238:+ | NBN^ENSG00000104320.14 | chr8:89958854:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:17350:8188 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:197501238-chr8:89958854 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HSPA1B--ASB17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSPA1B^ENSG00000204388.7 | chr6:31829997:+ | ASB17^ENSG00000154007.7 | chr1:75931917:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2283:40698:20379 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:31829997-chr1:75931917 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| HSF2--TAMM41 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSF2^ENSG00000025156.13 | chr6:122432005:+ | TAMM41^ENSG00000144559.10 | chr3:11808629:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:10797:24246 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr3]""]" | chr6:122432005-chr3:11808629 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSDL2--EPB41L4A-AS1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HSDL2^ENSG00000119471.15 | chr9:112470563:+ | EPB41L4A-AS1^ENSG00000224032.7 | chr5:112160997:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:22778:1532 | . | NO_LDAS | 0.0017 | GT | 0.5665 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr9--chr5]""]" | chr9:112470563-chr5:112160997 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSDL2--CARF | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSDL2^ENSG00000119471.15 | chr9:112459457:+ | CARF^ENSG00000138380.18 | chr2:202955685:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1208:25480:22383 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:112459457-chr2:202955685 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HSBP1L1--BDH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HSBP1L1^ENSG00000226742.4 | chr18:79966762:+ | BDH1^ENSG00000161267.12 | chr3:197522693:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:33538:14704 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr18--chr3]""]" | chr18:79966762-chr3:197522693 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HS6ST2--LASTR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HS6ST2^ENSG00000171004.18 | chrX:132956808:- | LASTR^ENSG00000242147.3 | chr10:5603346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:51643:19664 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chrX--chr10]""]" | chrX:132956808-chr10:5603346 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HRH1--ATG7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HRH1^ENSG00000196639.7 | chr3:11154554:+ | ATG7^ENSG00000197548.12 | chr3:11306943:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2470:28822:16091 | . | YES_LDAS | 0.0034 | GT | 1.2867 | AG | 1.7232 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]" | chr3:11154554-chr3:11306943 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HRH1--ATG7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HRH1^ENSG00000196639.7 | chr3:11137399:+ | ATG7^ENSG00000197548.12 | chr3:11298686:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1371:6922:17170 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7968 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]" | chr3:11137399-chr3:11298686 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| HPCAL4--VSNL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HPCAL4^ENSG00000116983.13 | chr1:39683937:- | VSNL1^ENSG00000163032.12 | chr2:17592070:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:6784:8693 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6402 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:39683937-chr2:17592070 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| HOXB4--AC145207.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HOXB4^ENSG00000182742.6 | chr17:48577863:- | AC145207.2^ENSG00000262413.1 | chr17:81868237:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:6202:15615 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5058 | "[""INTRACHROMOSOMAL[chr17:33.29Mb]""]" | chr17:48577863-chr17:81868237 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HOXB13--STRIP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HOXB13^ENSG00000159184.8 | chr17:48728645:- | STRIP1^ENSG00000143093.15 | chr1:110041734:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1289:10028:14031 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:48728645-chr1:110041734 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HOMER2--FDX1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HOMER2^ENSG00000103942.13 | chr15:82846236:- | FDX1^ENSG00000137714.3 | chr11:110456918:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1425:28037:17619 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:82846236-chr11:110456918 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HNRNPA3P6--AC095057.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HNRNPA3P6^ENSG00000213300.5 | chr3:75215647:+ | AC095057.1^ENSG00000248977.1 | chr4:40142293:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1356:6331:14606 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr4]""]" | chr3:75215647-chr4:40142293 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HNRNPA1P10--HNRNPA3P16 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | HNRNPA1P10^ENSG00000214223.4 | chr19:11666346:- | HNRNPA3P16^ENSG00000267233.1 | chr18:50815473:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1313:20456:11888 | . | NO_LDAS | 0.0011 | GT | 1.4295 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr19--chr18]""]" | chr19:11666346-chr18:50815473 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HMOX2--NAGPA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HMOX2^ENSG00000103415.12 | chr16:4507012:+ | NAGPA^ENSG00000103174.13 | chr16:5031884:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:18094:20968 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.51Mb]""]" | chr16:4507012-chr16:5031884 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HMGN2P3--STX7 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HMGN2P3^ENSG00000230330.1 | chr16:26032659:- | STX7^ENSG00000079950.14 | chr6:132503514:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1192:50948:21430 | . | YES_LDAS | 0.0017 | GT | 0.9968 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr16--chr6]""]" | chr16:26032659-chr6:132503514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HMBS--ZFHX2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HMBS^ENSG00000256269.10 | chr11:119085070:+ | ZFHX2^ENSG00000136367.14 | chr14:23532586:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:40245:23294 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:119085070-chr14:23532586 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HLF--NPM1P21 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HLF^ENSG00000108924.14 | chr17:55265062:+ | NPM1P21^ENSG00000248578.1 | chr8:56101596:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:42089:2499 | . | NO_LDAS | 0.0034 | GT | 0.9056 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:55265062-chr8:56101596 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HLA-F-AS1--YJEFN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HLA-F-AS1^ENSG00000214922.9 | chr6:29748900:- | YJEFN3^ENSG00000250067.12 | chr19:19535034:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1141:48602:9267 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:29748900-chr19:19535034 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HIP1--CYSTM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HIP1^ENSG00000127946.17 | chr7:75738801:- | CYSTM1^ENSG00000120306.11 | chr5:140194446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:2440:23644 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:75738801-chr5:140194446 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HIGD1AP1--CCDC13 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HIGD1AP1^ENSG00000258016.1 | chr12:53142284:+ | CCDC13^ENSG00000244607.7 | chr3:42758346:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1341:24760:26600 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:53142284-chr3:42758346 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HHAT--SENP7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HHAT^ENSG00000054392.13 | chr1:210588099:+ | SENP7^ENSG00000138468.16 | chr3:101372126:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1345:44379:21878 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:210588099-chr3:101372126 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HERPUD2--FAM210A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HERPUD2^ENSG00000122557.11 | chr7:35694184:- | FAM210A^ENSG00000177150.13 | chr18:13682105:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:46482:4671 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr18]""]" | chr7:35694184-chr18:13682105 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HDHD2--ZNF407 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HDHD2^ENSG00000167220.12 | chr18:47150378:- | ZNF407^ENSG00000215421.9 | chr18:74781428:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:18547:16960 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.6402 | "[""INTRACHROMOSOMAL[chr18:27.45Mb]""]" | chr18:47150378-chr18:74781428 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HCG9--TMEM61 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HCG9^ENSG00000204625.10 | chr6:29975517:+ | TMEM61^ENSG00000143001.5 | chr1:54980954:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:13216:10556 | . | NO_LDAS | 0.0034 | GT | 1.1589 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:29975517-chr1:54980954 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS7--ECHDC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HAUS7^ENSG00000213397.11 | chrX:153470828:- | ECHDC2^ENSG00000121310.17 | chr1:52911790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:8022:1084 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chrX--chr1]""]" | chrX:153470828-chr1:52911790 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS5--CLCN2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | HAUS5^ENSG00000249115.9 | chr19:35618658:+ | CLCN2^ENSG00000114859.16 | chr3:184355460:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2252:43084:25073 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr3]""]" | chr19:35618658-chr3:184355460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| HAUS3--MXD4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | HAUS3^ENSG00000214367.9 | chr4:2080958:- | MXD4^ENSG00000123933.17 | chr4:2252522:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2313:42008:8749 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5156]""]" | chr4:2080958-chr4:2252522 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| HAPLN3--MFGE8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | HAPLN3^ENSG00000140511.12 | chr15:88893089:- | MFGE8^ENSG00000140545.15 | chr15:88905763:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1225:36588:7712 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3086]""]" | chr15:88893089-chr15:88905763 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| H4C8--AC006122.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | H4C8^ENSG00000158406.5 | chr6:26285448:- | AC006122.1^ENSG00000213970.4 | chr12:4324635:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:3937:23069 | . | YES_LDAS | 0.0008 | GT | 1.6895 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr12]""]" | chr6:26285448-chr12:4324635 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| H2AZ2P1--CHFR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | H2AZ2P1^ENSG00000258741.4 | chr15:92733985:- | CHFR^ENSG00000072609.18 | chr12:132822311:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:8718:14816 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr12]""]" | chr15:92733985-chr12:132822311 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| H2AC21--LINC01802 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | H2AC21^ENSG00000184270.6 | chr1:149887617:- | LINC01802^ENSG00000225064.1 | chr2:207260467:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2468:29275:14214 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:149887617-chr2:207260467 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GYG1--PPP1R11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GYG1^ENSG00000163754.18 | chr3:149028541:+ | PPP1R11^ENSG00000204619.8 | chr6:30068593:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1145:18232:14536 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:149028541-chr6:30068593 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTF2IP9--AC006001.3 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | GTF2IP9^ENSG00000251451.1 | chr7:66409060:- | AC006001.3^ENSG00000229180.7 | chr7:66573550:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2412:29258:18333 | . | NO_LDAS | 0.0011 | GT | 1.8256 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr7:0.12Mb]""]" | chr7:66409060-chr7:66573550 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTF2H5--MILR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTF2H5^ENSG00000272047.3 | chr6:158170538:+ | MILR1^ENSG00000271605.6 | chr17:64468334:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:24809:13793 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:158170538-chr17:64468334 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTF2H1--TSG101 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GTF2H1^ENSG00000110768.12 | chr11:18326153:+ | TSG101^ENSG00000074319.13 | chr11:18516164:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:31071:28702 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:0.10Mb]""]" | chr11:18326153-chr11:18516164 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GTF2E2--PCMTD2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTF2E2^ENSG00000197265.9 | chr8:30658137:- | PCMTD2^ENSG00000203880.12 | chr20:64255877:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:22236:22425 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:30658137-chr20:64255877 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GTDC1--PDP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GTDC1^ENSG00000121964.14 | chr2:144145572:- | PDP2^ENSG00000172840.7 | chr16:66889483:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:1526:7067 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:144145572-chr16:66889483 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GSTK1--ZNF138 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GSTK1^ENSG00000197448.14 | chr7:143263585:+ | ZNF138^ENSG00000197008.10 | chr7:64831451:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1363:38174:23602 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr7:78.41Mb]""]" | chr7:143263585-chr7:64831451 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GSDMB--AC105219.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GSDMB^ENSG00000073605.18 | chr17:39912326:- | AC105219.3^ENSG00000254973.2 | chr8:143758435:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:15141:26054 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr8]""]" | chr17:39912326-chr8:143758435 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GRAMD2B--POP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GRAMD2B^ENSG00000155324.10 | chr5:126423689:+ | POP4^ENSG00000105171.10 | chr19:29608657:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1208:14195:14130 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr19]""]" | chr5:126423689-chr19:29608657 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GRAMD1B--C1QTNF1-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GRAMD1B^ENSG00000023171.18 | chr11:123610338:+ | C1QTNF1-AS1^ENSG00000265096.2 | chr17:79020177:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:39525:8090 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr17]""]" | chr11:123610338-chr17:79020177 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GPX8--NDUFS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPX8^ENSG00000164294.14 | chr5:55160243:+ | NDUFS4^ENSG00000164258.12 | chr5:53646233:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2368:41539:5078 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr5:1.48Mb]""]" | chr5:55160243-chr5:53646233 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPSM2--EPM2A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPSM2^ENSG00000121957.15 | chr1:108904254:+ | EPM2A^ENSG00000112425.16 | chr6:145627693:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:27810:20421 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:108904254-chr6:145627693 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRIN2--NPY4R | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GPRIN2^ENSG00000204175.5 | chr10:46550365:- | NPY4R^ENSG00000204174.8 | chr10:46462694:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:32341:1504 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]" | chr10:46550365-chr10:46462694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRC5D-AS1--MAOB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPRC5D-AS1^ENSG00000247498.10 | chr12:12927803:+ | MAOB^ENSG00000069535.14 | chrX:43778739:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1442:26815:9225 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr12--chrX]""]" | chr12:12927803-chrX:43778739 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPRC5D-AS1--FAM234B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPRC5D-AS1^ENSG00000247498.10 | chr12:12979622:+ | FAM234B^ENSG00000084444.14 | chr12:13055551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:43270:9393 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[59736]""]" | chr12:12979622-chr12:13055551 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| GPR173--WBP1P1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GPR173^ENSG00000184194.6 | chrX:53049484:+ | WBP1P1^ENSG00000231351.2 | chr2:86930685:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:41353:5008 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:53049484-chr2:86930685 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPR158--NEBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPR158^ENSG00000151025.11 | chr10:25551085:+ | NEBL^ENSG00000078114.19 | chr10:20812940:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1291:25877:15839 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr10:3.88Mb]""]" | chr10:25551085-chr10:20812940 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPR135--L3HYPDH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPR135^ENSG00000181619.11 | chr14:59456438:- | L3HYPDH^ENSG00000126790.12 | chr14:59479351:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:4018:3929 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[4979]""]" | chr14:59456438-chr14:59479351 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPHN--MNAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GPHN^ENSG00000171723.16 | chr14:66965325:+ | MNAT1^ENSG00000020426.11 | chr14:60879714:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:21484:12686 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr14:5.54Mb]""]" | chr14:66965325-chr14:60879714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GPATCH2--SPATA17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GPATCH2^ENSG00000092978.11 | chr1:217610321:- | SPATA17^ENSG00000162814.11 | chr1:217741960:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:51918:22915 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:-:+:[234]""]" | chr1:217610321-chr1:217741960 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GOLT1B--STRADA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GOLT1B^ENSG00000111711.10 | chr12:21501948:+ | STRADA^ENSG00000266173.7 | chr17:63714108:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2296:14785:25634 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr12--chr17]""]" | chr12:21501948-chr17:63714108 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GOLIM4--SCUBE1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GOLIM4^ENSG00000173905.9 | chr3:168029220:- | SCUBE1^ENSG00000159307.19 | chr22:43227480:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:29995:13891 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr22]""]" | chr3:168029220-chr22:43227480 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GNGT1--BET1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GNGT1^ENSG00000127928.13 | chr7:93591771:+ | BET1^ENSG00000105829.13 | chr7:93999294:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1129:49597:25956 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr7:0.05Mb]"",""LOCAL_INVERSION:+:-:[51497]""]" | chr7:93591771-chr7:93999294 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GNB1L--ZRANB3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GNB1L^ENSG00000185838.14 | chr22:19788566:- | ZRANB3^ENSG00000121988.18 | chr2:135315530:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1164:49475:5092 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:19788566-chr2:135315530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GNAI1--AL449212.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GNAI1^ENSG00000127955.17 | chr7:80214035:+ | AL449212.1^ENSG00000244932.2 | chr3:129393985:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:7529:14242 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:80214035-chr3:129393985 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GLRX--FP565260.3 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GLRX^ENSG00000173221.14 | chr5:95817431:- | FP565260.3^ENSG00000277117.5 | chr21:5034582:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2476:22819:2555 | . | NO_LDAS | 0.0017 | GT | 1.9899 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr5--chr21]""]" | chr5:95817431-chr21:5034582 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GFRA1--SPDYE11 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | GFRA1^ENSG00000151892.15 | chr10:116062901:- | SPDYE11^ENSG00000286228.1 | chr7:73056138:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:42566:3774 | . | NO_LDAS | 0.0003 | GT | 1.5058 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr7]""]" | chr10:116062901-chr7:73056138 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GFOD2--ENKD1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GFOD2^ENSG00000141098.13 | chr16:67685457:- | ENKD1^ENSG00000124074.12 | chr16:67667093:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:2828:12938 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[7266]""]" | chr16:67685457-chr16:67667093 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| GFOD1--TBC1D7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GFOD1^ENSG00000145990.11 | chr6:13486638:- | TBC1D7^ENSG00000145979.18 | chr6:13326906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2134:9495:5120 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr6:0.03Mb]"",""NEIGHBORS[29247]""]" | chr6:13486638-chr6:13326906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GFM1--AP000547.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GFM1^ENSG00000168827.15 | chr3:158646947:+ | AP000547.1^ENSG00000233995.1 | chr22:16574465:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1355:42008:25395 | . | YES_LDAS | 0.0017 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr3--chr22]""]" | chr3:158646947-chr22:16574465 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GET3--RNASEH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GET3^ENSG00000198356.12 | chr19:12738658:+ | RNASEH1^ENSG00000171865.10 | chr2:3556904:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2217:10967:4419 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:12738658-chr2:3556904 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GEN1--MFSD8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GEN1^ENSG00000178295.15 | chr2:17753967:+ | MFSD8^ENSG00000164073.11 | chr4:127933093:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2171:8815:14228 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:17753967-chr4:127933093 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GEMIN6--CENPC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GEMIN6^ENSG00000152147.11 | chr2:38782033:+ | CENPC^ENSG00000145241.11 | chr4:67509105:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1463:48682:23280 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr4]""]" | chr2:38782033-chr4:67509105 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GCSH--CLYBL | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GCSH^ENSG00000140905.11 | chr16:81096131:- | CLYBL^ENSG00000125246.15 | chr13:99772824:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:32268:9001 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr16--chr13]""]" | chr16:81096131-chr13:99772824 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GCOM2--AC084824.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GCOM2^ENSG00000227725.3 | chr4:68038685:+ | AC084824.1^ENSG00000257511.1 | chr12:32726636:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:34549:24975 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:68038685-chr12:32726636 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GCC2--SFR1 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | GCC2^ENSG00000135968.21 | chr2:108508313:+ | SFR1^ENSG00000156384.15 | chr10:104123007:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2352:20926:25620 | . | YES_LDAS | 0.0006 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr10]""]" | chr2:108508313-chr10:104123007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GATC--DPP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GATC^ENSG00000257218.6 | chr12:120462047:+ | DPP4^ENSG00000197635.11 | chr2:161992845:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2257:11007:27329 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:120462047-chr2:161992845 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GARNL3--SCAI | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | GARNL3^ENSG00000136895.19 | chr9:127357377:+ | SCAI^ENSG00000173611.18 | chr9:125056007:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2119:15643:27259 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr9:2.08Mb]""]" | chr9:127357377-chr9:125056007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GAREM1--AC011825.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GAREM1^ENSG00000141441.16 | chr18:32287031:- | AC011825.2^ENSG00000263393.1 | chr18:32124154:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2317:7957:12658 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""NEIGHBORS[399]""]" | chr18:32287031-chr18:32124154 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GAPDHP14--EBF4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GAPDHP14^ENSG00000236056.1 | chr21:29222795:+ | EBF4^ENSG00000088881.21 | chr20:2752175:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:38254:18193 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr21--chr20]""]" | chr21:29222795-chr20:2752175 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GALR3--HOGA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GALR3^ENSG00000128310.3 | chr22:37823765:+ | HOGA1^ENSG00000241935.9 | chr10:97612185:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2301:28393:20533 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr10]""]" | chr22:37823765-chr10:97612185 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GALNT2--PSKH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GALNT2^ENSG00000143641.10 | chr1:230255299:+ | PSKH1^ENSG00000159792.10 | chr16:67927843:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2178:7804:23966 | . | YES_LDAS | 0.0034 | GC | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:230255299-chr16:67927843 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GALE--SNRPA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GALE^ENSG00000117308.15 | chr1:23795989:- | SNRPA1^ENSG00000131876.17 | chr15:101295202:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:15004:26628 | . | YES_LDAS | 0.0034 | GC | 1.8062 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:23795989-chr15:101295202 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| GABARAPL2--COA5 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | GABARAPL2^ENSG00000034713.8 | chr16:75568051:+ | COA5^ENSG00000183513.9 | chr2:98604191:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1347:6639:23350 | . | NO_LDAS | 0.0017 | GT | 1.5656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:75568051-chr2:98604191 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| GABARAPL1--POFUT2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | GABARAPL1^ENSG00000139112.11 | chr12:10221893:+ | POFUT2^ENSG00000186866.17 | chr21:45277835:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2292:11752:28478 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr21]""]" | chr12:10221893-chr21:45277835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| G2E3-AS1--ADAP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | G2E3-AS1^ENSG00000257636.6 | chr14:30492717:- | ADAP2^ENSG00000184060.11 | chr17:30953288:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:20173:1476 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr14--chr17]""]" | chr14:30492717-chr17:30953288 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FUT8--RIC8B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FUT8^ENSG00000033170.17 | chr14:65629606:+ | RIC8B^ENSG00000111785.21 | chr12:106815230:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1386:33991:24737 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr14--chr12]""]" | chr14:65629606-chr12:106815230 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FUT8--EFCAB11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FUT8^ENSG00000033170.17 | chr14:65629606:+ | EFCAB11^ENSG00000140025.16 | chr14:89797324:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2230:13645:21976 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr14:24.05Mb]""]" | chr14:65629606-chr14:89797324 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FTH1P13--FTH1P12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FTH1P13^ENSG00000258960.1 | chr14:65901323:- | FTH1P12^ENSG00000213362.3 | chr9:15527650:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1122:12981:26881 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr14--chr9]""]" | chr14:65901323-chr9:15527650 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FSD1--TP73 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FSD1^ENSG00000105255.11 | chr19:4310295:+ | TP73^ENSG00000078900.15 | chr1:3729726:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:35876:21948 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:4310295-chr1:3729726 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FRG1BP--ZCCHC8 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | FRG1BP^ENSG00000149531.15 | chr20:30379651:+ | ZCCHC8^ENSG00000033030.15 | chr12:122482695:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2201:41021:16596 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr12]""]" | chr20:30379651-chr12:122482695 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FOXO1--LINC00598 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40466677:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2203:29679:25732 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40466677 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FOXO1--LINC00598 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXO1^ENSG00000150907.10 | chr13:40665583:- | LINC00598^ENSG00000215483.11 | chr13:40460406:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:42639:19314 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]" | chr13:40665583-chr13:40460406 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FOXN2--PHACTR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FOXN2^ENSG00000170802.16 | chr2:48314814:+ | PHACTR2^ENSG00000112419.14 | chr6:143712016:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:41523:18165 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:48314814-chr6:143712016 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FLNB-AS1--IL17D | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FLNB-AS1^ENSG00000244161.1 | chr3:58170615:- | IL17D^ENSG00000172458.4 | chr13:20704229:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:17051:12826 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr3--chr13]""]" | chr3:58170615-chr13:20704229 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FLACC1--THUMPD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FLACC1^ENSG00000155749.13 | chr2:201351819:- | THUMPD3^ENSG00000134077.16 | chr3:9383199:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1394:10401:18515 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:201351819-chr3:9383199 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FKBP14--INTS6 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | FKBP14^ENSG00000106080.11 | chr7:30022665:- | INTS6^ENSG00000102786.15 | chr13:51430383:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1454:22673:23882 | . | YES_LDAS | 0.0017 | GT | 0.9183 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr13]""]" | chr7:30022665-chr13:51430383 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FGGY--C11orf80 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FGGY^ENSG00000172456.18 | chr1:59378837:+ | C11orf80^ENSG00000173715.18 | chr11:66815758:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:18474:7782 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:59378837-chr11:66815758 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| FEZ2--DTNB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEZ2^ENSG00000171055.15 | chr2:36597877:- | DTNB^ENSG00000138101.19 | chr2:25628384:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1482:26192:20645 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr2:10.86Mb]""]" | chr2:36597877-chr2:25628384 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEZ1--C11orf98 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEZ1^ENSG00000149557.14 | chr11:125463484:- | C11orf98^ENSG00000278615.5 | chr11:62664973:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2106:37737:10290 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr11:62.78Mb]""]" | chr11:125463484-chr11:62664973 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEN1--AC006122.1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | FEN1^ENSG00000168496.4 | chr11:61796333:+ | AC006122.1^ENSG00000213970.4 | chr12:4324623:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:6364:21276 | . | YES_LDAS | 0.0008 | GT | 1.8892 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr11--chr12]""]" | chr11:61796333-chr12:4324623 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FEM1C--DCP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FEM1C^ENSG00000145780.8 | chr5:115542950:- | DCP2^ENSG00000172795.17 | chr5:112985835:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:16840:14284 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:2.50Mb]""]" | chr5:115542950-chr5:112985835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FDPSP5--GAL3ST1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FDPSP5^ENSG00000215035.2 | chrX:44476198:- | GAL3ST1^ENSG00000128242.13 | chr22:30557401:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1230:51385:27623 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chrX--chr22]""]" | chrX:44476198-chr22:30557401 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FCN3--CD164L2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FCN3^ENSG00000142748.13 | chr1:27370596:- | CD164L2^ENSG00000174950.11 | chr1:27382399:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2405:44265:18431 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4352]""]" | chr1:27370596-chr1:27382399 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXO5--KATNA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXO5^ENSG00000112029.10 | chr6:152974907:- | KATNA1^ENSG00000186625.14 | chr6:149638560:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1333:44977:29081 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:3.32Mb]""]" | chr6:152974907-chr6:149638560 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXO33--FAM157A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FBXO33^ENSG00000165355.7 | chr14:39431584:- | FAM157A^ENSG00000236438.7 | chr3:198220998:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1189:17326:29361 | . | YES_LDAS | 0.0017 | GT | 1.5219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:39431584-chr3:198220998 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXO33--FAM157A | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FBXO33^ENSG00000165355.7 | chr14:39431584:- | FAM157A^ENSG00000236438.7 | chr3:198220901:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1189:17326:29361 | . | YES_LDAS | 0.0017 | GT | 1.5219 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr14--chr3]""]" | chr14:39431584-chr3:198220901 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXO21--FBXW8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXO21^ENSG00000135108.15 | chr12:117172471:- | FBXW8^ENSG00000174989.13 | chr12:116964697:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:17479:11467 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:0.11Mb]""]" | chr12:117172471-chr12:116964697 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXL8--RAB26 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXL8^ENSG00000135722.9 | chr16:67161937:+ | RAB26^ENSG00000167964.13 | chr16:2151569:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:32219:24807 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr16:65.01Mb]""]" | chr16:67161937-chr16:2151569 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBXL8--HGSNAT | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FBXL8^ENSG00000135722.9 | chr16:67161937:+ | HGSNAT^ENSG00000165102.15 | chr8:43182145:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2236:40835:9828 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr8]""]" | chr16:67161937-chr8:43182145 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBN1--AC084757.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FBN1^ENSG00000166147.14 | chr15:48610728:- | AC084757.2^ENSG00000259469.1 | chr15:48729540:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:3055:23167 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr15:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[83359]""]" | chr15:48610728-chr15:48729540 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FBLN2--PC | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FBLN2^ENSG00000163520.14 | chr3:13571015:+ | PC^ENSG00000173599.15 | chr11:66858385:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:26597:25493 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:13571015-chr11:66858385 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAT4--RBM27 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | FAT4^ENSG00000196159.14 | chr4:125319178:+ | RBM27^ENSG00000091009.8 | chr5:146285947:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2114:34056:16442 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr5]""]" | chr4:125319178-chr5:146285947 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FARS2--AL136307.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FARS2^ENSG00000145982.13 | chr6:5613320:+ | AL136307.1^ENSG00000233064.2 | chr6:5870041:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2302:32195:5204 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.02Mb]"",""NEIGHBORS[22314]""]" | chr6:5613320-chr6:5870041 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| FARS2--AC093249.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FARS2^ENSG00000145982.13 | chr6:5368846:+ | AC093249.2^ENSG00000260167.1 | chr16:30585922:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:11250:28590 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr6--chr16]""]" | chr6:5368846-chr16:30585922 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FARP2--IQCJ-SCHIP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FARP2^ENSG00000006607.14 | chr2:241373290:+ | IQCJ-SCHIP1^ENSG00000283154.2 | chr3:159886207:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2379:16266:19426 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr3]""]" | chr2:241373290-chr3:159886207 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAR2P1--DTNB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAR2P1^ENSG00000180178.11 | chr2:130028309:- | DTNB^ENSG00000138101.19 | chr2:25628384:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2155:31216:18641 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr2:104.34Mb]""]" | chr2:130028309-chr2:25628384 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM98B--JRK | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM98B^ENSG00000171262.11 | chr15:38484450:+ | JRK^ENSG00000234616.9 | chr8:142665263:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1254:30642:27904 | . | YES_LDAS | 0.0034 | GT | 1.053 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr15--chr8]""]" | chr15:38484450-chr8:142665263 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM3A--GSEC | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM3A^ENSG00000071889.17 | chrX:154515760:- | GSEC^ENSG00000280832.1 | chr11:126354397:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2306:38530:28814 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chrX--chr11]""]" | chrX:154515760-chr11:126354397 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAM24B--NSMCE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM24B^ENSG00000213185.7 | chr10:122879485:- | NSMCE1^ENSG00000169189.17 | chr16:27257581:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1228:13038:23167 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr16]""]" | chr10:122879485-chr16:27257581 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM219B--BEND7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM219B^ENSG00000178761.15 | chr15:74900217:- | BEND7^ENSG00000165626.17 | chr10:13452658:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1372:31273:16554 | . | YES_LDAS | 0.0034 | GC | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr10]""]" | chr15:74900217-chr10:13452658 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM184B--UXS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM184B^ENSG00000047662.5 | chr4:17652830:- | UXS1^ENSG00000115652.15 | chr2:106112765:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1248:36952:8090 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:17652830-chr2:106112765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM172A--KIAA0825 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM172A^ENSG00000113391.19 | chr5:94050731:- | KIAA0825^ENSG00000185261.14 | chr5:94154124:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2146:46814:22341 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.4295 | "[""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[41267]""]" | chr5:94050731-chr5:94154124 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM172A--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM172A^ENSG00000113391.19 | chr5:94050731:- | DEPDC1B^ENSG00000035499.13 | chr5:60687227:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:9883:10052 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:32.92Mb]""]" | chr5:94050731-chr5:60687227 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM155B--EDA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM155B^ENSG00000130054.5 | chrX:69506143:+ | EDA^ENSG00000158813.18 | chrX:69957027:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:3621:28716 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""NEIGHBORS[83559]""]" | chrX:69506143-chrX:69957027 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| FAM13A--LINC01997 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM13A^ENSG00000138640.15 | chr4:88938088:- | LINC01997^ENSG00000241383.2 | chr3:169005995:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:27074:27749 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:88938088-chr3:169005995 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM135A--GABPA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM135A^ENSG00000082269.17 | chr6:70428419:+ | GABPA^ENSG00000154727.11 | chr21:25741573:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1418:47655:24947 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr6--chr21]""]" | chr6:70428419-chr21:25741573 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM133B--CDK6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | FAM133B^ENSG00000234545.8 | chr7:92590268:- | CDK6^ENSG00000105810.10 | chr7:92833690:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:5619:19847 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""Klijn_CellLines"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[14528]""]" | chr7:92590268-chr7:92833690 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| FAM126A--SEC11A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM126A^ENSG00000122591.13 | chr7:22938280:- | SEC11A^ENSG00000140612.14 | chr15:84680832:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:50608:24316 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr15]""]" | chr7:22938280-chr15:84680832 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| FAM120B--UPF3AP3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | FAM120B^ENSG00000112584.14 | chr6:170404559:+ | UPF3AP3^ENSG00000234709.2 | chr9:99998490:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:13159:12840 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:170404559-chr9:99998490 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| EZH1--CCR10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EZH1^ENSG00000108799.13 | chr17:42702877:- | CCR10^ENSG00000184451.5 | chr17:42680617:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:41102:25199 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr17:0.02Mb]"",""NEIGHBORS[16358]""]" | chr17:42702877-chr17:42680617 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EXT1--FAM210B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | EXT1^ENSG00000182197.12 | chr8:118110541:- | FAM210B^ENSG00000124098.10 | chr20:56365087:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:32478:20183 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:118110541-chr20:56365087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EXOC5--PSEN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC5^ENSG00000070367.16 | chr14:57239595:- | PSEN1^ENSG00000080815.19 | chr14:73147795:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1348:3888:27609 | . | NO_LDAS | 0.0034 | GC | 1.8295 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr14:15.87Mb]""]" | chr14:57239595-chr14:73147795 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EXOC2--DUSP22 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC2^ENSG00000112685.14 | chr6:693019:- | DUSP22^ENSG00000112679.14 | chr6:304628:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2102:38821:17717 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr6:0.13Mb]""]" | chr6:693019-chr6:304628 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EXOC1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EXOC1^ENSG00000090989.18 | chr4:55899884:+ | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2422:2149:13527 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:55899884-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ERVMER34-1--SCFD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERVMER34-1^ENSG00000226887.8 | chr4:52750930:- | SCFD2^ENSG00000184178.16 | chr4:52920870:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:48812:1785 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr4:0.12Mb]""]" | chr4:52750930-chr4:52920870 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ERVK13-1--TOR1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ERVK13-1^ENSG00000260565.7 | chr16:2682140:- | TOR1B^ENSG00000136816.16 | chr9:129808905:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:20052:26741 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:2682140-chr9:129808905 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EPHA1--AC008132.1 | 1 | 0 | 0.06 | 0.0 | INCL_NON_REF_SPLICE | EPHA1^ENSG00000146904.9 | chr7:143390635:- | AC008132.1^ENSG00000161103.11 | chr22:18847398:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:1825:1645 | . | NO_LDAS | 0.0002 | GT | 1.8256 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr22]""]" | chr7:143390635-chr22:18847398 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EPB41L5--PTPN4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPB41L5^ENSG00000115109.14 | chr2:120042110:+ | PTPN4^ENSG00000088179.9 | chr2:119920069:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1375:29768:9772 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]" | chr2:120042110-chr2:119920069 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EPB41L5--PTPN4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EPB41L5^ENSG00000115109.14 | chr2:120019264:+ | PTPN4^ENSG00000088179.9 | chr2:119932424:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:14017:23826 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]" | chr2:120019264-chr2:119932424 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ENPP4--NXF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ENPP4^ENSG00000001561.7 | chr6:46130189:+ | NXF1^ENSG00000162231.14 | chr11:62803978:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2379:16873:26306 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr11]""]" | chr6:46130189-chr11:62803978 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ENO3--CCNG1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ENO3^ENSG00000108515.18 | chr17:4948319:+ | CCNG1^ENSG00000113328.19 | chr5:163439371:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2150:6922:14256 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr5]""]" | chr17:4948319-chr5:163439371 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EMG1--PRX | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EMG1^ENSG00000126749.16 | chr12:6971091:+ | PRX^ENSG00000105227.16 | chr19:40403862:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1433:3435:11131 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:6971091-chr19:40403862 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELP3--NUGGC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELP3^ENSG00000134014.17 | chr8:28162078:+ | NUGGC^ENSG00000189233.12 | chr8:28074456:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1234:31192:2065 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_INVERSION:+:-:[5737]""]" | chr8:28162078-chr8:28074456 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELOVL2-AS1--SYCP2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ELOVL2-AS1^ENSG00000230314.7 | chr6:11047999:+ | SYCP2L^ENSG00000153157.13 | chr6:10956136:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1241:46555:26040 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[64162]""]" | chr6:11047999-chr6:10956136 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ELOA-AS1--METTL16 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ELOA-AS1^ENSG00000236810.6 | chr1:23706930:- | METTL16^ENSG00000127804.13 | chr17:2459993:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1375:21209:5316 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:23706930-chr17:2459993 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EIF4E2--AC009075.2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | EIF4E2^ENSG00000135930.14 | chr2:232558018:+ | AC009075.2^ENSG00000261774.1 | chr16:72278298:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:12431:6591 | . | NO_LDAS | 0.0008 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:232558018-chr16:72278298 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EIF2B4--LYSMD4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EIF2B4^ENSG00000115211.16 | chr2:27367170:- | LYSMD4^ENSG00000183060.15 | chr15:99732007:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2424:27519:8398 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:27367170-chr15:99732007 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EIF2AK3--SAMD3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EIF2AK3^ENSG00000172071.14 | chr2:88613724:- | SAMD3^ENSG00000164483.17 | chr6:130184623:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1160:30690:12518 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:88613724-chr6:130184623 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EIF2AK2--ASMTL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EIF2AK2^ENSG00000055332.19 | chr2:37156908:- | ASMTL^ENSG00000169093.16 | chrX:1452873:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2316:47501:23532 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:37156908-chrX:1452873 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EFR3B--H2AC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EFR3B^ENSG00000084710.14 | chr2:25146569:+ | H2AC4^ENSG00000278463.2 | chr6:26033576:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:2990:20533 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:25146569-chr6:26033576 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EFCAB2--KIF26B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EFCAB2^ENSG00000203666.12 | chr1:245083688:+ | KIF26B^ENSG00000162849.16 | chr1:245366834:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:21597:19328 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[27821]""]" | chr1:245083688-chr1:245366834 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| EFCAB2--C10orf88 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EFCAB2^ENSG00000203666.12 | chr1:245083688:+ | C10orf88^ENSG00000119965.13 | chr10:122938159:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1105:25513:25017 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:245083688-chr10:122938159 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EEF1B2P6--DDX3Y | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EEF1B2P6^ENSG00000213261.3 | chr7:131661944:- | DDX3Y^ENSG00000067048.17 | chrY:12918741:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1291:40099:17997 | . | NO_LDAS | 0.0034 | AT | 1.5546 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chrY]""]" | chr7:131661944-chrY:12918741 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EEF1AKMT3--TSFM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EEF1AKMT3^ENSG00000123427.17 | chr12:57773128:+ | TSFM^ENSG00000123297.20 | chr12:57783110:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:50616:10570 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS[220]""]" | chr12:57773128-chr12:57783110 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| EEF1AKMT2--CIB1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | EEF1AKMT2^ENSG00000203791.15 | chr10:124791724:- | CIB1^ENSG00000185043.12 | chr15:90232327:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2398:44087:25830 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:124791724-chr15:90232327 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EEF1AKMT2--AL121769.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EEF1AKMT2^ENSG00000203791.15 | chr10:124789043:- | AL121769.1^ENSG00000242163.1 | chr14:81332990:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:33837:5022 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:124789043-chr14:81332990 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| EEF1A1P19--UBA3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EEF1A1P19^ENSG00000249855.1 | chr5:43495120:- | UBA3^ENSG00000144744.17 | chr3:69075464:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1110:28967:10486 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr3]""]" | chr5:43495120-chr3:69075464 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ECT2--BBOF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ECT2^ENSG00000114346.14 | chr3:172752272:+ | BBOF1^ENSG00000119636.16 | chr14:74040565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1382:49079:24639 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr3--chr14]""]" | chr3:172752272-chr14:74040565 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| EBF4--C1orf21 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | EBF4^ENSG00000088881.21 | chr20:2748560:+ | C1orf21^ENSG00000116667.15 | chr1:184624433:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1357:13030:11131 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr20--chr1]""]" | chr20:2748560-chr1:184624433 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| E2F6--PDIA6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | E2F6^ENSG00000169016.17 | chr2:11465772:- | PDIA6^ENSG00000143870.13 | chr2:10802640:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:15206:19300 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8323 | "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr2:0.61Mb]""]" | chr2:11465772-chr2:10802640 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DUS3L--AP001324.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DUS3L^ENSG00000141994.16 | chr19:5788357:- | AP001324.3^ENSG00000279353.1 | chr11:74699256:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:49831:25381 | . | NO_LDAS | 0.0034 | GT | 1.4256 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr19--chr11]""]" | chr19:5788357-chr11:74699256 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DUBR--CYRIB | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DUBR^ENSG00000243701.7 | chr3:107241017:+ | CYRIB^ENSG00000153310.19 | chr8:129862318:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1104:47275:10865 | . | NO_LDAS | 0.0034 | GC | 1.9086 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:107241017-chr8:129862318 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DTWD2--TNFAIP8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTWD2^ENSG00000169570.10 | chr5:118988294:- | TNFAIP8^ENSG00000145779.8 | chr5:119392816:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:8588:20561 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:0.28Mb]""]" | chr5:118988294-chr5:119392816 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTWD2--TAB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DTWD2^ENSG00000169570.10 | chr5:118839037:- | TAB1^ENSG00000100324.14 | chr22:39426703:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:44265:17815 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr22]""]" | chr5:118839037-chr22:39426703 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTWD1--SEC62 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTWD1^ENSG00000104047.15 | chr15:49625431:+ | SEC62^ENSG00000008952.17 | chr3:169982707:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:14543:14144 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:49625431-chr3:169982707 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DTD2--G2E3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DTD2^ENSG00000129480.13 | chr14:31457283:- | G2E3^ENSG00000092140.16 | chr14:30601770:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:3476:15993 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr14:0.83Mb]""]" | chr14:31457283-chr14:30601770 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DPM1--CERNA1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPM1^ENSG00000000419.13 | chr20:50945737:- | CERNA1^ENSG00000259577.2 | chr15:52205277:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1313:42146:15040 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.4256 | "[""INTERCHROMOSOMAL[chr20--chr15]""]" | chr20:50945737-chr15:52205277 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DPH6--TRIM67 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPH6^ENSG00000134146.12 | chr15:35373517:- | TRIM67^ENSG00000119283.15 | chr1:231197446:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:7715:14760 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:35373517-chr1:231197446 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DPH5--LDHAL6EP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPH5^ENSG00000117543.21 | chr1:100992637:- | LDHAL6EP^ENSG00000270098.1 | chr4:71436985:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:34582:11719 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.1589 | "[""INTERCHROMOSOMAL[chr1--chr4]""]" | chr1:100992637-chr4:71436985 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DPF2--DNM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DPF2^ENSG00000133884.10 | chr11:65341562:+ | DNM1^ENSG00000106976.21 | chr9:128224309:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1191:7521:4111 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr11--chr9]""]" | chr11:65341562-chr9:128224309 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DOHH--DCST2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DOHH^ENSG00000129932.10 | chr19:3496593:- | DCST2^ENSG00000163354.15 | chr1:155023913:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1351:24129:4433 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:3496593-chr1:155023913 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNM1L--LRRC53 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNM1L^ENSG00000087470.19 | chr12:32733807:+ | LRRC53^ENSG00000162621.7 | chr1:74471567:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:50964:19861 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:32733807-chr1:74471567 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNAJC27-AS1--AP4E1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJC27-AS1^ENSG00000224165.6 | chr2:24972232:+ | AP4E1^ENSG00000081014.11 | chr15:51001026:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2392:3281:4195 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr2--chr15]""]" | chr2:24972232-chr15:51001026 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC24--ANO3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DNAJC24^ENSG00000170946.15 | chr11:31370859:+ | ANO3^ENSG00000134343.14 | chr11:26309645:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1155:3896:23139 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:4.71Mb]""]" | chr11:31370859-chr11:26309645 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC22--SDHAP1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DNAJC22^ENSG00000178401.16 | chr12:49351498:+ | SDHAP1^ENSG00000185485.14 | chr3:195960086:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:51595:16610 | . | YES_LDAS | 0.0017 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr12--chr3]""]" | chr12:49351498-chr3:195960086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DNAJC19--DNAJC19P5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJC19^ENSG00000205981.8 | chr3:180985926:- | DNAJC19P5^ENSG00000225808.1 | chr2:177229255:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:41296:25059 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr3--chr2]""]" | chr3:180985926-chr2:177229255 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DNAJB11--AC022400.7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DNAJB11^ENSG00000090520.12 | chr3:186585483:+ | AC022400.7^ENSG00000279689.1 | chr10:73769433:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:36685:13933 | . | YES_LDAS | 0.0034 | GT | 0.9183 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr10]""]" | chr3:186585483-chr10:73769433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DMBX1--SEMA7A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DMBX1^ENSG00000197587.11 | chr1:46512649:+ | SEMA7A^ENSG00000138623.10 | chr15:74411680:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:3427:5400 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr1--chr15]""]" | chr1:46512649-chr15:74411680 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DLG2--AC124944.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DLG2^ENSG00000150672.18 | chr11:85626599:- | AC124944.2^ENSG00000260261.2 | chr3:195923779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2328:19963:3606 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr11--chr3]""]" | chr11:85626599-chr3:195923779 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DHX32--AC079779.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DHX32^ENSG00000089876.12 | chr10:125859726:- | AC079779.3^ENSG00000235779.8 | chr2:314242:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2367:11250:16820 | . | NO_LDAS | 0.0034 | GT | 1.3383 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:125859726-chr2:314242 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DHFR--MRPL1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | DHFR^ENSG00000228716.7 | chr5:80654008:- | MRPL1^ENSG00000169288.18 | chr4:77871744:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:30351:23504 | . | YES_LDAS | 0.0017 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr5--chr4]""]" | chr5:80654008-chr4:77871744 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DHDDS--AL121970.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DHDDS^ENSG00000117682.17 | chr1:26442873:+ | AL121970.1^ENSG00000236389.1 | chr6:134706498:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1103:31321:28492 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr6]""]" | chr1:26442873-chr6:134706498 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DESI2--FLVCR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DESI2^ENSG00000121644.19 | chr1:244653355:+ | FLVCR1^ENSG00000162769.13 | chr1:212863725:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1492:35172:5624 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.75Mb]""]" | chr1:244653355-chr1:212863725 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DERL1--AC104316.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DERL1^ENSG00000136986.10 | chr8:123041970:- | AC104316.2^ENSG00000259631.1 | chr8:122977225:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1371:20359:21164 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr8:0.03Mb]"",""NEIGHBORS[27541]""]" | chr8:123041970-chr8:122977225 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DEPDC1B--PDE4D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DEPDC1B^ENSG00000035499.13 | chr5:60638750:- | PDE4D^ENSG00000113448.19 | chr5:60185687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:42227:15433 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8892 | "[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""NEIGHBORS[74792]""]" | chr5:60638750-chr5:60185687 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DENND4A--AQP7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DENND4A^ENSG00000174485.16 | chr15:65676445:- | AQP7^ENSG00000165269.13 | chr9:33383687:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:16581:16750 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:65676445-chr9:33383687 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DECR1--AC100786.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DECR1^ENSG00000104325.7 | chr8:90001527:+ | AC100786.1^ENSG00000264272.1 | chr17:74261759:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:32292:17591 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:90001527-chr17:74261759 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDX59--TMEM87B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDX59^ENSG00000118197.14 | chr1:200648439:- | TMEM87B^ENSG00000153214.11 | chr2:112077192:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2340:3524:5568 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:200648439-chr2:112077192 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDX58--MRE11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX58^ENSG00000107201.11 | chr9:32500930:- | MRE11^ENSG00000020922.13 | chr11:94467886:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1377:48407:29221 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr9--chr11]""]" | chr9:32500930-chr11:94467886 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDX11L9--MRPL55 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDX11L9^ENSG00000248472.8 | chr15:101978367:- | MRPL55^ENSG00000162910.19 | chr1:228108474:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2486:35722:28520 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:101978367-chr1:228108474 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDRGK1--CARNMT1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDRGK1^ENSG00000198171.13 | chr20:3200001:- | CARNMT1^ENSG00000156017.13 | chr9:75028076:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1344:45762:16119 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 0.9183 | "[""INTERCHROMOSOMAL[chr20--chr9]""]" | chr20:3200001-chr9:75028076 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDRGK1--CADM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDRGK1^ENSG00000198171.13 | chr20:3200001:- | CADM2^ENSG00000175161.14 | chr3:84959377:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2282:11040:11663 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr20--chr3]""]" | chr20:3200001-chr3:84959377 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DDR2--RGS5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDR2^ENSG00000162733.19 | chr1:162655374:+ | RGS5^ENSG00000143248.13 | chr1:163168368:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:21824:14592 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:0.32Mb]""]" | chr1:162655374-chr1:163168368 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDIT4L--KIF14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DDIT4L^ENSG00000145358.6 | chr4:100188121:- | KIF14^ENSG00000118193.12 | chr1:200618179:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:23070:2766 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:100188121-chr1:200618179 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DDAH1--BCL10 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DDAH1^ENSG00000153904.21 | chr1:85464743:- | BCL10^ENSG00000142867.14 | chr1:85270906:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48610:18277 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[41853]""]" | chr1:85464743-chr1:85270906 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCUN1D5--LSM14B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCUN1D5^ENSG00000137692.12 | chr11:103083285:- | LSM14B^ENSG00000149657.20 | chr20:62122568:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2373:30601:21192 | . | YES_LDAS | 0.0034 | GT | 1.5058 | AG | 1.371 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:103083285-chr20:62122568 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCUN1D1--MCCC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCUN1D1^ENSG00000043093.15 | chr3:182961226:- | MCCC1^ENSG00000078070.13 | chr3:183041750:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2334:35415:7726 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[29265]""]" | chr3:182961226-chr3:183041750 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCTN6--PPM1D | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCTN6^ENSG00000104671.8 | chr8:30164175:+ | PPM1D^ENSG00000170836.12 | chr17:60647892:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1396:39144:18726 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr17]""]" | chr8:30164175-chr17:60647892 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCTD--TRPM6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCTD^ENSG00000129187.15 | chr4:182891403:- | TRPM6^ENSG00000119121.22 | chr9:74782476:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:1396:10626 | . | NO_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:182891403-chr9:74782476 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DCTD--AP5M1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCTD^ENSG00000129187.15 | chr4:182914923:- | AP5M1^ENSG00000053770.12 | chr14:57274244:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:2149:14452 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr4--chr14]""]" | chr4:182914923-chr14:57274244 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCP2--SLF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCP2^ENSG00000172795.17 | chr5:112976986:+ | SLF1^ENSG00000133302.13 | chr5:94628811:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2142:40536:1126 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr5:18.24Mb]""]" | chr5:112976986-chr5:94628811 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCP2--SEMA6A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DCP2^ENSG00000172795.17 | chr5:112992712:+ | SEMA6A^ENSG00000092421.17 | chr5:116446804:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:47056:26881 | . | YES_LDAS | 0.0034 | AT | 1.8323 | AC | 1.9219 | "[""INTRACHROMOSOMAL[chr5:3.42Mb]""]" | chr5:112992712-chr5:116446804 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCHS2--PLRG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCHS2^ENSG00000197410.14 | chr4:154377253:- | PLRG1^ENSG00000171566.12 | chr4:154548935:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:37510:21612 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7968 | "[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[43206]""]" | chr4:154377253-chr4:154548935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DCAKD--LINC02862 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | LINC02862^ENSG00000237571.1 | chr2:215277608:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:45013487-chr2:215277608 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAKD--ELP4 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | ELP4^ENSG00000109911.19 | chr11:31580683:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:45013487-chr11:31580683 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAKD--CCDC144NL | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | DCAKD^ENSG00000172992.12 | chr17:45013487:- | CCDC144NL^ENSG00000205212.5 | chr17:20837111:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271 | . | NO_LDAS | 0.0011 | GT | 1.9899 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr17:24.13Mb]""]" | chr17:45013487-chr17:20837111 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| DCAF6--IWS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DCAF6^ENSG00000143164.15 | chr1:167975015:+ | IWS1^ENSG00000163166.15 | chr2:127523791:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:27252:3592 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr2]""]" | chr1:167975015-chr2:127523791 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| DBNDD2--SYS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | DBNDD2^ENSG00000244274.8 | chr20:45410255:+ | SYS1^ENSG00000204070.10 | chr20:45366875:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:39274:24527 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[29259]""]" | chr20:45410255-chr20:45366875 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| DAPK1--FPR2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DAPK1^ENSG00000196730.13 | chr9:87647403:+ | FPR2^ENSG00000171049.9 | chr19:51769618:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:87647403-chr19:51769618 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DAPK1--FPR1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | DAPK1^ENSG00000196730.13 | chr9:87647403:+ | FPR1^ENSG00000171051.9 | chr19:51746038:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:87647403-chr19:51746038 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| DANCR--HS6ST2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | DANCR^ENSG00000226950.8 | chr4:52712959:+ | HS6ST2^ENSG00000171004.18 | chrX:132629093:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:43966:4321 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr4--chrX]""]" | chr4:52712959-chrX:132629093 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYTH1--FAM234B | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CYTH1^ENSG00000108669.16 | chr17:78700381:- | FAM234B^ENSG00000084444.14 | chr12:13142204:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2485:38602:13443 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr17--chr12]""]" | chr17:78700381-chr12:13142204 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYTH1--DYNC2H1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CYTH1^ENSG00000108669.16 | chr17:78700381:- | DYNC2H1^ENSG00000187240.16 | chr11:103435974:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2485:38602:13443 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:78700381-chr11:103435974 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYTH1--DACT3-AS1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CYTH1^ENSG00000108669.16 | chr17:78700381:- | DACT3-AS1^ENSG00000245598.6 | chr19:46662306:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2485:38602:13443 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:78700381-chr19:46662306 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYTH1--CACNA2D3 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CYTH1^ENSG00000108669.16 | chr17:78700381:- | CACNA2D3^ENSG00000157445.15 | chr3:55073809:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2485:38602:13443 | . | NO_LDAS | 0.0008 | GT | 1.8295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:78700381-chr3:55073809 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYP4V2--TRAPPC11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CYP4V2^ENSG00000145476.16 | chr4:186194612:+ | TRAPPC11^ENSG00000168538.16 | chr4:183691316:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2381:7626:21360 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:2.48Mb]""]" | chr4:186194612-chr4:183691316 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYP4F12--FAM32A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CYP4F12^ENSG00000186204.15 | chr19:15685197:+ | FAM32A^ENSG00000105058.12 | chr19:16190520:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1412:32365:10094 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr19:0.49Mb]""]" | chr19:15685197-chr19:16190520 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYP2C23P--CLCN2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CYP2C23P^ENSG00000283232.1 | chr10:100122527:- | CLCN2^ENSG00000114859.16 | chr3:184355460:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2252:43084:25073 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:100122527-chr3:184355460 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYP26C1--MAPK7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYP26C1^ENSG00000187553.10 | chr10:93063128:+ | MAPK7^ENSG00000166484.20 | chr17:19381852:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:23733:17254 | . | NO_LDAS | 0.0034 | GT | 1.231 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr10--chr17]""]" | chr10:93063128-chr17:19381852 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYP20A1--AC084838.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CYP20A1^ENSG00000119004.16 | chr2:203272748:+ | AC084838.1^ENSG00000255076.2 | chr8:14879300:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:13248:10753 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr8]""]" | chr2:203272748-chr8:14879300 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYP1B1-AS1--SCNM1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYP1B1-AS1^ENSG00000232973.13 | chr2:38082536:+ | SCNM1^ENSG00000163156.12 | chr1:151167005:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1210:44921:26040 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:38082536-chr1:151167005 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYB561D2--EIF1B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB561D2^ENSG00000114395.11 | chr3:50351560:+ | EIF1B^ENSG00000114784.4 | chr3:40309871:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:14769:21206 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr3:10.05Mb]""]" | chr3:50351560-chr3:40309871 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CYB561A3--LINC00279 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB561A3^ENSG00000162144.10 | chr11:61356533:- | LINC00279^ENSG00000286217.2 | chrY:8633049:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:43950:14214 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chrY]""]" | chr11:61356533-chrY:8633049 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CYB561A3--ECSIT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CYB561A3^ENSG00000162144.10 | chr11:61360332:- | ECSIT^ENSG00000130159.14 | chr19:11507532:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2389:15902:29165 | . | NO_LDAS | 0.0034 | AT | 1.9086 | AC | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:61360332-chr19:11507532 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CXXC5--PCSK6 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CXXC5^ENSG00000171604.12 | chr5:139680640:+ | PCSK6^ENSG00000140479.18 | chr15:101308738:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:23927:2794 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:139680640-chr15:101308738 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CUTC--ELF4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CUTC^ENSG00000119929.13 | chr10:99736317:+ | ELF4^ENSG00000102034.17 | chrX:130081312:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2346:12512:11775 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr10--chrX]""]" | chr10:99736317-chrX:130081312 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CUL2--LINC00662 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CUL2^ENSG00000108094.16 | chr10:35032435:- | LINC00662^ENSG00000261824.7 | chr19:27726986:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1318:45277:5694 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:35032435-chr19:27726986 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CU633906.5--RAB41 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CU633906.5^ENSG00000288187.1 | chr21:6216499:- | RAB41^ENSG00000147127.8 | chrX:70282261:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:45576:6353 | . | NO_LDAS | 0.0034 | GT | 1.2419 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr21--chrX]""]" | chr21:6216499-chrX:70282261 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CTTNBP2--ELAPOR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTTNBP2^ENSG00000077063.11 | chr7:117861209:- | ELAPOR2^ENSG00000164659.15 | chr7:86926916:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2154:47987:4055 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr7:30.65Mb]""]" | chr7:117861209-chr7:86926916 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CTSW--KIF22 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CTSW^ENSG00000172543.9 | chr11:65883482:+ | KIF22^ENSG00000079616.13 | chr16:29799092:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2170:19785:1448 | . | NO_LDAS | 0.0017 | GC | 1.231 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:65883482-chr16:29799092 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CTSC--RAB38 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CTSC^ENSG00000109861.17 | chr11:88296133:- | RAB38^ENSG00000123892.12 | chr11:88149955:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2246:45560:23223 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8062 | "[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]" | chr11:88296133-chr11:88149955 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CTNNBL1--LINCR-0003 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CTNNBL1^ENSG00000132792.19 | chr20:37733072:+ | LINCR-0003^ENSG00000249436.2 | chr5:57616902:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:28708:29543 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:37733072-chr5:57616902 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CTAGE15--ARHGEF5 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | CTAGE15^ENSG00000271079.1 | chr7:143571949:+ | ARHGEF5^ENSG00000050327.15 | chr7:144371299:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:31087:8076 | . | NO_LDAS | 0.0007 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr7:0.78Mb]""]" | chr7:143571949-chr7:144371299 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CSTF3--UBE4B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSTF3^ENSG00000176102.13 | chr11:33161299:- | UBE4B^ENSG00000130939.20 | chr1:10161142:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1107:8993:15068 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:33161299-chr1:10161142 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CSTF3--AK7 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CSTF3^ENSG00000176102.13 | chr11:33108395:- | AK7^ENSG00000140057.9 | chr14:96458149:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1161:18102:8314 | . | NO_LDAS | 0.0011 | GT | 1.5546 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr11--chr14]""]" | chr11:33108395-chr14:96458149 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CSTA--TPRG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CSTA^ENSG00000121552.4 | chr3:122325358:+ | TPRG1^ENSG00000188001.10 | chr3:189215292:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:34622:14872 | . | YES_LDAS | 0.0034 | GT | 1.585 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr3:66.61Mb]""]" | chr3:122325358-chr3:189215292 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CSAG1--CD99L2 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | CSAG1^ENSG00000198930.13 | chrX:152732445:- | CD99L2^ENSG00000102181.21 | chrX:150816078:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2338:39622:26558 | . | YES_LDAS | 0.0011 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chrX:1.83Mb]""]" | chrX:152732445-chrX:150816078 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CRYL1--RHBDL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRYL1^ENSG00000165475.15 | chr13:20432102:- | RHBDL1^ENSG00000103269.14 | chr16:676053:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:3880:7782 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:20432102-chr16:676053 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRYBG3--TMSB15B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRYBG3^ENSG00000080200.10 | chr3:97822355:+ | TMSB15B^ENSG00000158427.15 | chrX:103931139:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2391:33934:19987 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chrX]""]" | chr3:97822355-chrX:103931139 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRYBB2--UGP2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CRYBB2^ENSG00000244752.3 | chr22:25229551:+ | UGP2^ENSG00000169764.16 | chr2:63887994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:6509:13289 | . | NO_LDAS | 0.0008 | GT | 1.9086 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:25229551-chr2:63887994 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CRY1--KLHDC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CRY1^ENSG00000008405.12 | chr12:106992787:- | KLHDC2^ENSG00000165516.11 | chr14:49771594:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:7731:29053 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:106992787-chr14:49771594 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CRTC3-AS1--CSNK1G2-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CRTC3-AS1^ENSG00000259736.1 | chr15:90641042:- | CSNK1G2-AS1^ENSG00000180846.8 | chr19:1953011:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1227:39662:5302 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr15--chr19]""]" | chr15:90641042-chr19:1953011 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CRLF3--MEP1A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CRLF3^ENSG00000176390.12 | chr17:30797311:- | MEP1A^ENSG00000112818.11 | chr6:46839674:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:2149:7109 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr17--chr6]""]" | chr17:30797311-chr6:46839674 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CREM--CCDC7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CREM^ENSG00000095794.19 | chr10:35179276:+ | CCDC7^ENSG00000216937.13 | chr10:32451592:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1106:47420:22411 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr10:2.24Mb]""]" | chr10:35179276-chr10:32451592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CRADD--CWC22 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CRADD^ENSG00000169372.13 | chr12:93679072:+ | CWC22^ENSG00000163510.14 | chr2:179973246:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1472:49500:10234 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr2]""]" | chr12:93679072-chr2:179973246 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CR2--ZNF717 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CR2^ENSG00000117322.18 | chr1:207477954:+ | ZNF717^ENSG00000227124.11 | chr3:75736919:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2279:11299:14662 | . | NO_LDAS | 0.0034 | GT | 1.6729 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:207477954-chr3:75736919 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CPLX1--ZP3P2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CPLX1^ENSG00000168993.15 | chr4:786505:- | ZP3P2^ENSG00000226066.1 | chr7:136487180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:14098:29599 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:786505-chr7:136487180 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COX18--SEC11C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COX18^ENSG00000163626.17 | chr4:73061895:- | SEC11C^ENSG00000166562.9 | chr18:59152565:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:19914:9127 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr18]""]" | chr4:73061895-chr18:59152565 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COX11--COQ2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COX11^ENSG00000166260.13 | chr17:54963306:- | COQ2^ENSG00000173085.15 | chr4:83279114:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:34145:7460 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr4]""]" | chr17:54963306-chr4:83279114 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CORO2B--TEAD3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CORO2B^ENSG00000103647.13 | chr15:68645364:+ | TEAD3^ENSG00000007866.22 | chr6:35475981:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:28441:4923 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr15--chr6]""]" | chr15:68645364-chr6:35475981 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CORO2A--PLPPR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CORO2A^ENSG00000106789.13 | chr9:98157460:- | PLPPR1^ENSG00000148123.15 | chr9:101185450:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2393:41677:26979 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr9:2.84Mb]""]" | chr9:98157460-chr9:101185450 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CORIN--AC107398.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CORIN^ENSG00000145244.12 | chr4:47623571:- | AC107398.2^ENSG00000248254.1 | chr4:47560261:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2365:22333:23350 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""NEIGHBORS[33740]""]" | chr4:47623571-chr4:47560261 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| COQ2--AC004847.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COQ2^ENSG00000173085.15 | chr4:83273496:- | AC004847.1^ENSG00000260997.1 | chr7:44959448:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:27632:13191 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr4--chr7]""]" | chr4:83273496-chr7:44959448 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COPS5P2--COPS5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COPS5P2^ENSG00000270445.1 | chr12:123441698:- | COPS5^ENSG00000121022.14 | chr8:67045915:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:15732:14858 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr8]""]" | chr12:123441698-chr8:67045915 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| COPS5--UQCC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COPS5^ENSG00000121022.14 | chr8:67045812:- | UQCC1^ENSG00000101019.22 | chr20:35306779:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1247:49669:27035 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr20]""]" | chr8:67045812-chr20:35306779 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COPS5--IL18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | COPS5^ENSG00000121022.14 | chr8:67045812:- | IL18^ENSG00000150782.12 | chr11:112150206:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:18393:4531 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr8--chr11]""]" | chr8:67045812-chr11:112150206 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COPS2--AC018638.8 | 1 | 0 | 0.13 | 0.0 | INCL_NON_REF_SPLICE | COPS2^ENSG00000166200.15 | chr15:49119045:- | AC018638.8^ENSG00000281896.1 | chr7:128617868:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1121:48488:28100 | . | YES_LDAS | 0.0004 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:49119045-chr7:128617868 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COPB1--HSD17B14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COPB1^ENSG00000129083.13 | chr11:14458604:- | HSD17B14^ENSG00000087076.9 | chr19:48813344:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:50640:16470 | . | YES_LDAS | 0.0034 | AT | 1.9899 | AC | 1.6895 | "[""INTERCHROMOSOMAL[chr11--chr19]""]" | chr11:14458604-chr19:48813344 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| COG3--SUOX | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | COG3^ENSG00000136152.15 | chr13:45464943:+ | SUOX^ENSG00000139531.13 | chr12:55997671:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1384:5749:8132 | . | NO_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr13--chr12]""]" | chr13:45464943-chr12:55997671 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CNTNAP3C--BX005040.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61453030:+ | BX005040.4^ENSG00000283541.1 | chr9:61097039:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:34946:25942 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61453030-chr9:61097039 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNTNAP3C--BX005040.4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTNAP3C^ENSG00000283378.1 | chr9:61331052:+ | BX005040.4^ENSG00000283541.1 | chr9:61082046:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:32074:17577 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr9:0.22Mb]""]" | chr9:61331052-chr9:61082046 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNTLN--IVNS1ABP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNTLN^ENSG00000044459.15 | chr9:17226287:+ | IVNS1ABP^ENSG00000116679.16 | chr1:185305643:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:16258:14984 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:17226287-chr1:185305643 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNOT9--AC073046.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNOT9^ENSG00000144580.14 | chr2:218568978:+ | AC073046.1^ENSG00000235499.1 | chr2:73985980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2247:39282:5932 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr2:144.58Mb]""]" | chr2:218568978-chr2:73985980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNOT8--ATF7IP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNOT8^ENSG00000155508.14 | chr5:154872651:+ | ATF7IP2^ENSG00000166669.13 | chr16:10457385:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:13078:14522 | . | NO_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:154872651-chr16:10457385 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CNOT10--TTC13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNOT10^ENSG00000182973.19 | chr3:32762863:+ | TTC13^ENSG00000143643.13 | chr1:230961303:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:23992:11313 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:32762863-chr1:230961303 | False | 0 | Excluded | annotation | pattern: | HGNC_GENEFAM | FAIL | 1 | ||||||
| CNKSR2--SUPT20H | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNKSR2^ENSG00000149970.16 | chrX:21652467:+ | SUPT20H^ENSG00000102710.20 | chr13:37051583:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2448:6275:16554 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chrX--chr13]""]" | chrX:21652467-chr13:37051583 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CNKSR1--DNAJC9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CNKSR1^ENSG00000142675.18 | chr1:26180896:+ | DNAJC9^ENSG00000213551.7 | chr10:73243929:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1133:42720:11747 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:26180896-chr10:73243929 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CNGB1--GAR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CNGB1^ENSG00000070729.14 | chr16:57949361:- | GAR1^ENSG00000109534.17 | chr4:109822405:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:14802:25325 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr16--chr4]""]" | chr16:57949361-chr4:109822405 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CMC1--ZCWPW2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CMC1^ENSG00000187118.14 | chr3:28241812:+ | ZCWPW2^ENSG00000206559.8 | chr3:28413056:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:12002:20982 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.7056 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[23579]""]" | chr3:28241812-chr3:28413056 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CMAHP--CASP9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CMAHP^ENSG00000168405.17 | chr6:25393431:- | CASP9^ENSG00000132906.18 | chr1:15495452:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2350:19882:16385 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:25393431-chr1:15495452 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CLYBL--TENM2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLYBL^ENSG00000125246.15 | chr13:99859045:+ | TENM2^ENSG00000145934.16 | chr5:167952522:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1211:16678:10220 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr13--chr5]""]" | chr13:99859045-chr5:167952522 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CLN8--PDGFC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLN8^ENSG00000182372.10 | chr8:1756082:+ | PDGFC^ENSG00000145431.11 | chr4:156850416:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2339:34662:4013 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr8--chr4]""]" | chr8:1756082-chr4:156850416 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CLCN2--POLR2H | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CLCN2^ENSG00000114859.16 | chr3:184352013:- | POLR2H^ENSG00000163882.9 | chr3:184368177:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2451:3063:1182 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_INVERSION:-:+:[68]""]" | chr3:184352013-chr3:184368177 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CLASP2--PDE7B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CLASP2^ENSG00000163539.17 | chr3:33498636:- | PDE7B^ENSG00000171408.14 | chr6:136192077:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2364:34007:8398 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr6]""]" | chr3:33498636-chr6:136192077 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CKLF--CMTM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CKLF^ENSG00000217555.13 | chr16:66552793:+ | CMTM1^ENSG00000089505.18 | chr16:66577104:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:18547:14858 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9329 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS[142]""]" | chr16:66552793-chr16:66577104 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CISD2--ZMYND11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CISD2^ENSG00000145354.12 | chr4:102869187:+ | ZMYND11^ENSG00000015171.20 | chr10:179994:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:20861:21752 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr4--chr10]""]" | chr4:102869187-chr10:179994 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CISD2--AL357153.2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CISD2^ENSG00000145354.12 | chr4:102869187:+ | AL357153.2^ENSG00000257759.2 | chr14:70453509:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1155:16808:12126 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr14]""]" | chr4:102869187-chr14:70453509 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHST6--TMEM170A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CHST6^ENSG00000183196.10 | chr16:75481817:- | TMEM170A^ENSG00000166822.13 | chr16:75465493:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1482:42575:18669 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[6555]""]" | chr16:75481817-chr16:75465493 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CHST11--SLC41A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHST11^ENSG00000171310.11 | chr12:104601991:+ | SLC41A2^ENSG00000136052.9 | chr12:104805337:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:21112:3466 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8295 | "[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr12:0.04Mb]"",""LOCAL_INVERSION:+:-:[40539]""]" | chr12:104601991-chr12:104805337 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHORDC1--PLEKHM3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHORDC1^ENSG00000110172.12 | chr11:90210536:- | PLEKHM3^ENSG00000178385.15 | chr2:207861262:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1219:15497:1476 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:90210536-chr2:207861262 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHMP4C--TERF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHMP4C^ENSG00000164695.5 | chr8:81732816:+ | TERF1^ENSG00000147601.15 | chr8:73045961:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:16452:23952 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr8:8.68Mb]""]" | chr8:81732816-chr8:73045961 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHMP4A--IRF9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHMP4A^ENSG00000254505.11 | chr14:24210348:- | IRF9^ENSG00000213928.9 | chr14:24164063:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2267:6113:12434 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.04Mb]"",""LOCAL_INVERSION:-:+:[43050]""]" | chr14:24210348-chr14:24164063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHM--AC117394.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CHM^ENSG00000188419.14 | chrX:86027491:- | AC117394.1^ENSG00000241671.1 | chr3:153129193:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:42752:14494 | . | YES_LDAS | 0.0017 | GT | 1.8295 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:86027491-chr3:153129193 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CHKA--ZNF343 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CHKA^ENSG00000110721.12 | chr11:68097019:- | ZNF343^ENSG00000088876.13 | chr20:2493577:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:47404:11313 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr20]""]" | chr11:68097019-chr20:2493577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFB--GGNBP2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFB^ENSG00000243649.9 | chr6:31952087:+ | GGNBP2^ENSG00000278311.5 | chr17:36577983:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2265:15352:15461 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr6--chr17]""]" | chr6:31952087-chr17:36577983 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CFAP70--ACKR2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP70^ENSG00000156042.18 | chr10:73291226:- | ACKR2^ENSG00000144648.16 | chr3:42866359:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:45082:19342 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:73291226-chr3:42866359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFAP44--SPICE1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CFAP44^ENSG00000206530.11 | chr3:113380899:- | SPICE1^ENSG00000163611.11 | chr3:113468404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:29420:11411 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.6402 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1108]""]" | chr3:113380899-chr3:113468404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CFAP36--PTPN22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CFAP36^ENSG00000163001.12 | chr2:55544074:+ | PTPN22^ENSG00000134242.16 | chr1:113871572:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:14640:2317 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:55544074-chr1:113871572 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CETN3--DEPDC1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CETN3^ENSG00000153140.9 | chr5:90399358:- | DEPDC1B^ENSG00000035499.13 | chr5:60647533:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:19300:12910 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.2729 | "[""INTRACHROMOSOMAL[chr5:29.69Mb]""]" | chr5:90399358-chr5:60647533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP85L--GET1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CEP85L^ENSG00000111860.14 | chr6:118464213:- | GET1^ENSG00000182093.16 | chr21:39390830:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2192:4438:22677 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr6--chr21]""]" | chr6:118464213-chr21:39390830 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CEP68--CMTR1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CEP68^ENSG00000011523.14 | chr2:65072521:+ | CMTR1^ENSG00000137200.13 | chr6:37435713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:32939:3438 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr6]""]" | chr2:65072521-chr6:37435713 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CEP290--HEATR5A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEP290^ENSG00000198707.17 | chr12:88120114:- | HEATR5A^ENSG00000129493.15 | chr14:31296063:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:46425:18922 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr14]""]" | chr12:88120114-chr14:31296063 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENPV--PJVK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CENPV^ENSG00000166582.10 | chr17:16349931:- | PJVK^ENSG00000204311.15 | chr2:178460982:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1261:40002:28170 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:16349931-chr2:178460982 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENPI--MYL6B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CENPI^ENSG00000102384.13 | chrX:101098539:+ | MYL6B^ENSG00000196465.10 | chr12:56157468:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:2424:25241 | . | YES_LDAS | 0.0034 | GT | 1.371 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chrX--chr12]""]" | chrX:101098539-chr12:56157468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CENATAC--AC142086.6 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CENATAC^ENSG00000186166.9 | chr11:119011283:+ | AC142086.6^ENSG00000277304.1 | chr16:32946317:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2102:20376:22509 | . | NO_LDAS | 0.0008 | GT | 1.9086 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr11--chr16]""]" | chr11:119011283-chr16:32946317 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CELF5--ZBTB8B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CELF5^ENSG00000161082.13 | chr19:3293809:+ | ZBTB8B^ENSG00000273274.2 | chr1:32470611:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2497:34509:23111 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr19--chr1]""]" | chr19:3293809-chr1:32470611 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CEBPZOS--ODR4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CEBPZOS^ENSG00000218739.10 | chr2:37201726:+ | ODR4^ENSG00000157181.16 | chr1:186406083:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2219:43642:21444 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:37201726-chr1:186406083 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDK8--IFT88 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDK8^ENSG00000132964.12 | chr13:26353880:+ | IFT88^ENSG00000032742.18 | chr13:20690705:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:45268:1476 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr13:5.56Mb]""]" | chr13:26353880-chr13:20690705 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDK6--POT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDK6^ENSG00000105810.10 | chr7:92725626:- | POT1^ENSG00000128513.16 | chr7:124842963:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1454:11226:18796 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr7:31.99Mb]""]" | chr7:92725626-chr7:124842963 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDH2--AC092115.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CDH2^ENSG00000170558.10 | chr18:27962899:- | AC092115.1^ENSG00000260290.2 | chr16:69756976:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2188:28279:2345 | . | YES_LDAS | 0.0017 | GT | 1.7232 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr18--chr16]""]" | chr18:27962899-chr16:69756976 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDCA5--DNAJC17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CDCA5^ENSG00000146670.10 | chr11:65079382:- | DNAJC17^ENSG00000104129.10 | chr15:40807455:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1191:45956:22060 | . | YES_LDAS | 0.0034 | GT | 1.4566 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:65079382-chr15:40807455 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDC40--CDK19 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDC40^ENSG00000168438.15 | chr6:110193268:+ | CDK19^ENSG00000155111.15 | chr6:110746201:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2317:30375:22229 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.1589 | "[""INTRACHROMOSOMAL[chr6:0.36Mb]""]" | chr6:110193268-chr6:110746201 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CDC25A--DSN1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CDC25A^ENSG00000164045.12 | chr3:48184653:- | DSN1^ENSG00000149636.16 | chr20:36771473:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:2383:21948 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr3--chr20]""]" | chr3:48184653-chr20:36771473 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CD99P1--MCPH1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD99P1^ENSG00000223773.7 | chrX:2626642:+ | MCPH1^ENSG00000147316.13 | chr8:6455143:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1251:17131:2205 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chrY--chr8]""]" | chrX:2626642-chr8:6455143 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CD99L2--FAM122C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CD99L2^ENSG00000102181.21 | chrX:150898522:- | FAM122C^ENSG00000156500.15 | chrX:134829226:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:50697:1518 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chrX:15.91Mb]""]" | chrX:150898522-chrX:134829226 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCT6P1--AC073210.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCT6P1^ENSG00000228409.6 | chr7:65763344:+ | AC073210.1^ENSG00000227113.2 | chr7:65078624:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:34703:17703 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:0.67Mb]""]" | chr7:65763344-chr7:65078624 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCSER1--TEX35 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCSER1^ENSG00000184305.15 | chr4:90309377:+ | TEX35^ENSG00000240021.10 | chr1:178521683:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:12884:20491 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:90309377-chr1:178521683 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCPG1--CATSPER2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CCPG1^ENSG00000260916.8 | chr15:55365188:- | CATSPER2^ENSG00000166762.19 | chr15:43640496:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2498:17698:28072 | . | YES_LDAS | 0.0017 | GT | 1.4295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:11.67Mb]""]" | chr15:55365188-chr15:43640496 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCP110--ERI2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCP110^ENSG00000103540.16 | chr16:19532544:+ | ERI2^ENSG00000196678.14 | chr16:20789557:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:47024:12392 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr16:1.23Mb]""]" | chr16:19532544-chr16:20789557 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCNJL--TTC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCNJL^ENSG00000135083.16 | chr5:160311858:- | TTC1^ENSG00000113312.11 | chr5:160035140:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:17779:1252 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 0.9183 | "[""INTRACHROMOSOMAL[chr5:0.18Mb]""]" | chr5:160311858-chr5:160035140 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCM2--TBRG4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCM2^ENSG00000136280.17 | chr7:45000363:+ | TBRG4^ENSG00000136270.14 | chr7:45105764:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:5045:2485 | . | YES_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""LOCAL_INVERSION:+:-:[23631]""]" | chr7:45000363-chr7:45105764 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC62--AL035458.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | CCDC62^ENSG00000130783.14 | chr12:122792121:+ | AL035458.1^ENSG00000236456.1 | chr20:34246332:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:15780:27834 | . | YES_LDAS | 0.0017 | GT | 1.7232 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:122792121-chr20:34246332 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC61--EXOSC2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCDC61^ENSG00000104983.8 | chr19:46006605:+ | EXOSC2^ENSG00000130713.16 | chr9:130700867:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2297:28255:5302 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:46006605-chr9:130700867 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC24--MFSD13A | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | CCDC24^ENSG00000159214.13 | chr1:43993906:+ | MFSD13A^ENSG00000138111.14 | chr10:102475782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:1332:8384 | . | NO_LDAS | 0.0011 | GC | 1.9656 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr1--chr10]""]" | chr1:43993906-chr10:102475782 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCDC198--NPIPB10P | 1 | 0 | 0.06 | 0.0 | ONLY_REF_SPLICE | CCDC198^ENSG00000100557.10 | chr14:57475582:- | NPIPB10P^ENSG00000196796.5 | chr16:29050502:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1495:27559:7600 | . | YES_LDAS | 0.0002 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr14--chr16]""]" | chr14:57475582-chr16:29050502 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC18-AS1--ZCCHC17 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC18-AS1^ENSG00000223745.8 | chr1:93305388:- | ZCCHC17^ENSG00000121766.16 | chr1:31319109:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:20869:26194 | . | YES_LDAS | 0.0034 | GT | 1.5219 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr1:61.90Mb]""]" | chr1:93305388-chr1:31319109 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC174--TSEN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC174^ENSG00000154781.16 | chr3:14665123:+ | TSEN2^ENSG00000154743.19 | chr3:12516611:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1330:51255:15713 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.4566 | "[""INTRACHROMOSOMAL[chr3:2.11Mb]""]" | chr3:14665123-chr3:12516611 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC168--PALB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CCDC168^ENSG00000175820.4 | chr13:102733703:- | PALB2^ENSG00000083093.10 | chr16:23636068:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2181:15133:3873 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr13--chr16]""]" | chr13:102733703-chr16:23636068 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCDC15--SLC37A2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC15^ENSG00000149548.15 | chr11:125039069:+ | SLC37A2^ENSG00000134955.12 | chr11:125076757:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:43367:21416 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[21813]""]" | chr11:125039069-chr11:125076757 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CCDC146--RASA4 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | CCDC146^ENSG00000135205.15 | chr7:77122732:+ | RASA4^ENSG00000105808.18 | chr7:102594242:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1310:15149:15979 | . | YES_LDAS | 0.0017 | GT | 1.3996 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr7:25.24Mb]""]" | chr7:77122732-chr7:102594242 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC146--AC004980.3 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | CCDC146^ENSG00000135205.15 | chr7:77254530:+ | AC004980.3^ENSG00000230305.2 | chr7:76524599:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1309:12779:12882 | . | YES_LDAS | 0.0003 | GT | 1.5546 | AG | 1.231 | "[""INTRACHROMOSOMAL[chr7:0.59Mb]""]" | chr7:77254530-chr7:76524599 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CCDC136--XRCC1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | CCDC136^ENSG00000128596.17 | chr7:128818197:+ | XRCC1^ENSG00000073050.12 | chr19:43546683:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2387:31176:1476 | . | NO_LDAS | 0.0008 | GT | 1.4716 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:128818197-chr19:43546683 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CCDC125--GINM1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CCDC125^ENSG00000183323.13 | chr5:69320237:- | GINM1^ENSG00000055211.14 | chr6:149578822:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2483:32648:10697 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr5--chr6]""]" | chr5:69320237-chr6:149578822 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CBX7--USPL1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CBX7^ENSG00000100307.13 | chr22:39141371:- | USPL1^ENSG00000132952.12 | chr13:30617727:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1305:29186:26895 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.3383 | "[""INTERCHROMOSOMAL[chr22--chr13]""]" | chr22:39141371-chr13:30617727 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CBLN4--AC012676.1 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | CBLN4^ENSG00000054803.4 | chr20:56004100:- | AC012676.1^ENSG00000262712.1 | chr16:4337173:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1472:45285:6100 | . | NO_LDAS | 0.0007 | GT | 1.4295 | AG | 1.4566 | "[""INTERCHROMOSOMAL[chr20--chr16]""]" | chr20:56004100-chr16:4337173 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CBFB--ZYG11B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CBFB^ENSG00000067955.15 | chr16:67066798:+ | ZYG11B^ENSG00000162378.13 | chr1:52756458:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:44767:3438 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:67066798-chr1:52756458 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CBFB--RPIA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CBFB^ENSG00000067955.15 | chr16:67082308:+ | RPIA^ENSG00000153574.9 | chr2:88729278:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2373:39622:15573 | . | YES_LDAS | 0.0034 | GT | 1.5329 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:67082308-chr2:88729278 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CBFA2T3--HDAC11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CBFA2T3^ENSG00000129993.15 | chr16:88879654:- | HDAC11^ENSG00000163517.15 | chr3:13500713:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:40439:17128 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr16--chr3]""]" | chr16:88879654-chr3:13500713 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CATSPER3--C5orf66 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CATSPER3^ENSG00000152705.8 | chr5:135009490:+ | C5orf66^ENSG00000224186.8 | chr5:135174042:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:26815:12056 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS[21584]""]" | chr5:135009490-chr5:135174042 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CATSPER3--C5orf66 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CATSPER3^ENSG00000152705.8 | chr5:135011608:+ | C5orf66^ENSG00000224186.8 | chr5:135052454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2486:16161:27792 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS[21584]""]" | chr5:135011608-chr5:135052454 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CASTOR3--GPC2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CASTOR3^ENSG00000239521.9 | chr7:100222597:- | GPC2^ENSG00000213420.8 | chr7:100176365:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1141:26953:9295 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:0.02Mb]"",""NEIGHBORS[23272]""]" | chr7:100222597-chr7:100176365 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CASTOR2--DYNLRB1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASTOR2^ENSG00000274070.2 | chr7:75031490:+ | DYNLRB1^ENSG00000125971.17 | chr20:34534672:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1322:33190:2303 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr7--chr20]""]" | chr7:75031490-chr20:34534672 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASP6--PPP1R11 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASP6^ENSG00000138794.10 | chr4:109694555:- | PPP1R11^ENSG00000204619.8 | chr6:30067193:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:12601:20001 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr4--chr6]""]" | chr4:109694555-chr6:30067193 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CASP2--TMEM139 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASP2^ENSG00000106144.20 | chr7:143294234:+ | TMEM139^ENSG00000178826.11 | chr7:143286551:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:11744:19524 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[167]""]" | chr7:143294234-chr7:143286551 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CASC9--AC100782.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CASC9^ENSG00000249395.4 | chr8:75324221:- | AC100782.1^ENSG00000254238.1 | chr8:75029459:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:16970:3634 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8062 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[90949]""]" | chr8:75324221-chr8:75029459 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| CAPS2--SUCO | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CAPS2^ENSG00000180881.19 | chr12:75282251:- | SUCO^ENSG00000094975.14 | chr1:172555869:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:8637:21934 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.6049 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:75282251-chr1:172555869 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CAMLG--GCSH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMLG^ENSG00000164615.6 | chr5:134744025:+ | GCSH^ENSG00000140905.11 | chr16:81082762:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:33570:11481 | . | YES_LDAS | 0.0034 | AT | 1.9329 | AC | 1.5329 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:134744025-chr16:81082762 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| CAMKMT--SLC8A3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMKMT^ENSG00000143919.15 | chr2:44362145:+ | SLC8A3^ENSG00000100678.19 | chr14:70167459:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2302:37809:1560 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr2--chr14]""]" | chr2:44362145-chr14:70167459 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CAMKK1--INSRR | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | CAMKK1^ENSG00000004660.15 | chr17:3869529:- | INSRR^ENSG00000027644.5 | chr1:156854250:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1203:36944:13065 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:3869529-chr1:156854250 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| CA13--CA3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | CA13^ENSG00000185015.8 | chr8:85268627:+ | CA3^ENSG00000164879.7 | chr8:85439712:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:6542:19931 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8892 | "[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]" | chr8:85268627-chr8:85439712 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| C9orf129--LINC00632 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | C9orf129^ENSG00000204352.4 | chr9:93335374:- | LINC00632^ENSG00000203930.12 | chrX:140764687:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2438:29760:28198 | . | NO_LDAS | 0.0017 | GT | 1.5058 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr9--chrX]""]" | chr9:93335374-chrX:140764687 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C8orf88--PIP4P2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C8orf88^ENSG00000253250.3 | chr8:90960742:- | PIP4P2^ENSG00000155099.8 | chr8:91021404:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11129:29305 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[8564]""]" | chr8:90960742-chr8:91021404 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf50--BMI1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C7orf50^ENSG00000146540.15 | chr7:1127257:- | BMI1^ENSG00000168283.14 | chr10:22326431:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2338:32494:28422 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:1127257-chr10:22326431 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf26--ZDHHC4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C7orf26^ENSG00000146576.13 | chr7:6602140:+ | ZDHHC4^ENSG00000136247.15 | chr7:6578501:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1129:44314:21934 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[647]""]" | chr7:6602140-chr7:6578501 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf25--VPS41 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C7orf25^ENSG00000136197.13 | chr7:42911915:- | VPS41^ENSG00000006715.16 | chr7:38898129:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:5555:4965 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:3.98Mb]""]" | chr7:42911915-chr7:38898129 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C7orf25--DMGDH | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C7orf25^ENSG00000136197.13 | chr7:42910813:- | DMGDH^ENSG00000132837.15 | chr5:79028624:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:37356:26811 | . | NO_LDAS | 0.0034 | GT | 1.7232 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:42910813-chr5:79028624 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C6orf62--MOB3A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C6orf62^ENSG00000112308.13 | chr6:24708777:- | MOB3A^ENSG00000172081.14 | chr19:2077013:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:38958:3410 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr6--chr19]""]" | chr6:24708777-chr19:2077013 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C2CD3--FAM168A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C2CD3^ENSG00000168014.18 | chr11:74074253:- | FAM168A^ENSG00000054965.11 | chr11:73412303:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1131:36127:3018 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.41Mb]""]" | chr11:74074253-chr11:73412303 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C2CD2L--FOXR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C2CD2L^ENSG00000172375.14 | chr11:119114365:+ | FOXR1^ENSG00000176302.13 | chr11:118978782:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2302:14260:20547 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr11:0.12Mb]""]" | chr11:119114365-chr11:118978782 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C20orf27--RFESD | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | C20orf27^ENSG00000101220.18 | chr20:3754404:- | RFESD^ENSG00000175449.14 | chr5:95656529:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:27746:22131 | . | NO_LDAS | 0.0017 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:3754404-chr5:95656529 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C1orf159--C1QTNF12 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1orf159^ENSG00000131591.18 | chr1:1116060:- | C1QTNF12^ENSG00000184163.3 | chr1:1244497:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1401:32009:4181 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr1:0.13Mb]""]" | chr1:1116060-chr1:1244497 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C1orf116--ACP7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C1orf116^ENSG00000182795.13 | chr1:207022770:- | ACP7^ENSG00000183760.11 | chr19:39100593:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1167:11242:29025 | . | YES_LDAS | 0.0034 | AT | 1.8323 | AC | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:207022770-chr19:39100593 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C1RL--DCP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1RL^ENSG00000139178.11 | chr12:7099686:- | DCP2^ENSG00000172795.17 | chr5:112985835:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2389:39096:11327 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:7099686-chr5:112985835 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C1RL--AL391095.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C1RL^ENSG00000139178.11 | chr12:7096670:- | AL391095.1^ENSG00000224635.2 | chr20:38406327:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1334:20481:16273 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.6729 | "[""INTERCHROMOSOMAL[chr12--chr20]""]" | chr12:7096670-chr20:38406327 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| C1QTNF6--IL2RB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1QTNF6^ENSG00000133466.14 | chr22:37185218:- | IL2RB^ENSG00000100385.14 | chr22:37144205:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1456:45026:6157 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""ConjoinG"",""INTRACHROMOSOMAL[chr22:0.01Mb]"",""NEIGHBORS[5112]""]" | chr22:37185218-chr22:37144205 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| C1GALT1--MSRA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C1GALT1^ENSG00000106392.11 | chr7:7182820:+ | MSRA^ENSG00000175806.15 | chr8:10207833:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:48496:7095 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr7--chr8]""]" | chr7:7182820-chr8:10207833 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C16orf87--TENT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C16orf87^ENSG00000155330.10 | chr16:46831084:- | TENT2^ENSG00000164329.13 | chr5:79645123:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:29719:28380 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr5]""]" | chr16:46831084-chr5:79645123 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C12orf77--GNS | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C12orf77^ENSG00000226397.8 | chr12:24997232:- | GNS^ENSG00000135677.11 | chr12:64716819:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2414:2391:28296 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr12:39.71Mb]""]" | chr12:24997232-chr12:64716819 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C12orf75--EBLN3P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | C12orf75^ENSG00000235162.9 | chr12:105330937:+ | EBLN3P^ENSG00000281649.2 | chr9:37086668:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:45584:28926 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr9]""]" | chr12:105330937-chr9:37086668 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| C11orf54--SYVN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | C11orf54^ENSG00000182919.15 | chr11:93762514:+ | SYVN1^ENSG00000162298.19 | chr11:65128359:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:39743:6143 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6895 | "[""INTRACHROMOSOMAL[chr11:28.61Mb]""]" | chr11:93762514-chr11:65128359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BZW1P2--NECTIN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BZW1P2^ENSG00000198406.7 | chr3:116645957:- | NECTIN1^ENSG00000110400.11 | chr11:119661791:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1316:31208:20925 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:116645957-chr11:119661791 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BX005266.3--POLR3GL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BX005266.3^ENSG00000234451.1 | chr9:62610667:- | POLR3GL^ENSG00000121851.13 | chr1:145975346:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2419:12455:13331 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr9--chr1]""]" | chr9:62610667-chr1:145975346 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BTBD8--TBK1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BTBD8^ENSG00000189195.15 | chr1:92171460:+ | TBK1^ENSG00000183735.11 | chr12:64480012:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:47987:11145 | . | NO_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:92171460-chr12:64480012 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BMPR1A--COX6C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BMPR1A^ENSG00000107779.14 | chr10:86921586:+ | COX6C^ENSG00000164919.11 | chr8:99892008:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:14494:10921 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr10--chr8]""]" | chr10:86921586-chr8:99892008 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BMPER--PRDM6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BMPER^ENSG00000164619.10 | chr7:33944308:+ | PRDM6^ENSG00000061455.11 | chr5:123099654:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1227:25238:9295 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr7--chr5]""]" | chr7:33944308-chr5:123099654 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BMP7--LIFR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BMP7^ENSG00000101144.13 | chr20:57265705:- | LIFR^ENSG00000113594.10 | chr5:38530666:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1481:41887:14732 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr20--chr5]""]" | chr20:57265705-chr5:38530666 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BLOC1S4--TRPC3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BLOC1S4^ENSG00000186222.5 | chr4:6716337:+ | TRPC3^ENSG00000138741.11 | chr4:121951605:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:8079:25620 | . | NO_LDAS | 0.0034 | GT | 1.5628 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr4:115.16Mb]""]" | chr4:6716337-chr4:121951605 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BLOC1S2--MESD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BLOC1S2^ENSG00000196072.12 | chr10:100286097:- | MESD^ENSG00000117899.11 | chr15:80952296:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:29970:8020 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:100286097-chr15:80952296 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BISPR--GCA | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BISPR^ENSG00000282851.2 | chr19:17406296:+ | GCA^ENSG00000115271.11 | chr2:162347578:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2441:40350:22859 | . | NO_LDAS | 0.0034 | GT | 1.9086 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr19--chr2]""]" | chr19:17406296-chr2:162347578 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BICDL1--AL139246.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BICDL1^ENSG00000135127.11 | chr12:119998736:+ | AL139246.3^ENSG00000228037.1 | chr1:2584184:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:8847:25465 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr12--chr1]""]" | chr12:119998736-chr1:2584184 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BDH1--FECH | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BDH1^ENSG00000161267.12 | chr3:197522640:- | FECH^ENSG00000066926.12 | chr18:57573365:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:45503:9477 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr18]""]" | chr3:197522640-chr18:57573365 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BCL7C--AC073046.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCL7C^ENSG00000099385.12 | chr16:30888860:- | AC073046.1^ENSG00000235499.1 | chr2:73985980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:50567:26600 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr16--chr2]""]" | chr16:30888860-chr2:73985980 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BCL2L12--AL355574.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCL2L12^ENSG00000126453.10 | chr19:49666799:+ | AL355574.1^ENSG00000238058.2 | chr9:135915787:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2487:14915:2653 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr19--chr9]""]" | chr19:49666799-chr9:135915787 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BCL11A--PWWP2A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BCL11A^ENSG00000119866.22 | chr2:60462118:- | PWWP2A^ENSG00000170234.13 | chr5:160119316:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1143:1947:16932 | . | NO_LDAS | 0.0034 | GT | 1.1033 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr2--chr5]""]" | chr2:60462118-chr5:160119316 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BCKDHB--AL359715.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.4^ENSG00000279022.1 | chr6:80440828:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2367:19785:10753 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]" | chr6:80273221-chr6:80440828 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| BCKDHB--AL359715.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BCKDHB^ENSG00000083123.15 | chr6:80273221:+ | AL359715.1^ENSG00000233967.7 | chr6:80462872:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:45519:1546 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]" | chr6:80273221-chr6:80462872 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| BBS9--BMPER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BBS9^ENSG00000122507.21 | chr7:33534176:+ | BMPER^ENSG00000164619.10 | chr7:33966479:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2105:17180:29557 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[27128]""]" | chr7:33534176-chr7:33966479 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BBS4--AC098969.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | BBS4^ENSG00000140463.14 | chr15:72735193:+ | AC098969.1^ENSG00000285738.1 | chr3:66794087:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:51182:4069 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.5546 | "[""INTERCHROMOSOMAL[chr15--chr3]""]" | chr15:72735193-chr3:66794087 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| BACH2--ANKRD6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BACH2^ENSG00000112182.15 | chr6:90206569:- | ANKRD6^ENSG00000135299.17 | chr6:89595916:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22333:2555 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr6:0.29Mb]""]" | chr6:90206569-chr6:89595916 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| BABAM2--WARS2-AS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | BABAM2^ENSG00000158019.21 | chr2:27988087:+ | WARS2-AS1^ENSG00000231365.6 | chr1:119150793:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:10967:23476 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr2--chr1]""]" | chr2:27988087-chr1:119150793 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AXDND1--SOAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AXDND1^ENSG00000162779.22 | chr1:179385359:+ | SOAT1^ENSG00000057252.13 | chr1:179347600:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2392:36046:18487 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7040]""]" | chr1:179385359-chr1:179347600 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AXDND1--SOAT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AXDND1^ENSG00000162779.22 | chr1:179370078:+ | SOAT1^ENSG00000057252.13 | chr1:179337837:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:37429:5442 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7040]""]" | chr1:179370078-chr1:179337837 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP6V0A1--JAK3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP6V0A1^ENSG00000033627.17 | chr17:42494473:+ | JAK3^ENSG00000105639.20 | chr19:17844403:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22050:2429 | . | NO_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr17--chr19]""]" | chr17:42494473-chr19:17844403 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATP5MD--RNF7 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATP5MD^ENSG00000173915.16 | chr10:103392191:- | RNF7^ENSG00000114125.14 | chr3:141747123:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:47372:26530 | . | YES_LDAS | 0.0034 | GT | 1.6049 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:103392191-chr3:141747123 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATP11C--MTMR1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATP11C^ENSG00000101974.14 | chrX:139782547:- | MTMR1^ENSG00000063601.17 | chrX:150699195:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:40034:8581 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chrX:10.75Mb]""]" | chrX:139782547-chrX:150699195 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG5--STX7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATG5^ENSG00000057663.16 | chr6:106316101:- | STX7^ENSG00000079950.14 | chr6:132503588:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2191:5433:2878 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:26.12Mb]""]" | chr6:106316101-chr6:132503588 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG4C--APIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATG4C^ENSG00000125703.15 | chr1:62805255:+ | APIP^ENSG00000149089.13 | chr11:34895110:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:4851:13611 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr1--chr11]""]" | chr1:62805255-chr11:34895110 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG3--QTRT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATG3^ENSG00000144848.11 | chr3:112553280:- | QTRT2^ENSG00000151576.10 | chr3:114079906:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1317:11889:21934 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:1.44Mb]""]" | chr3:112553280-chr3:114079906 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ATG3--AC024560.2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | ATG3^ENSG00000144848.11 | chr3:112538169:- | AC024560.2^ENSG00000249626.1 | chr3:197635202:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1330:15352:11145 | . | NO_LDAS | 0.0008 | GT | 1.6402 | AG | 1.3996 | "[""INTRACHROMOSOMAL[chr3:85.07Mb]""]" | chr3:112538169-chr3:197635202 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATF2--SETBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ATF2^ENSG00000115966.17 | chr2:175097444:- | SETBP1^ENSG00000152217.20 | chr18:44952879:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:26071:25956 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:175097444-chr18:44952879 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ATAD1--PTPN9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ATAD1^ENSG00000138138.14 | chr10:87767673:- | PTPN9^ENSG00000169410.10 | chr15:75479914:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2429:41766:5834 | . | YES_LDAS | 0.0034 | GT | 1.3383 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:87767673-chr15:75479914 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASTN2--ASB8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASTN2^ENSG00000148219.18 | chr9:116687066:- | ASB8^ENSG00000177981.11 | chr12:48153529:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:1938:16666 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr9--chr12]""]" | chr9:116687066-chr12:48153529 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASIC4--PPP4R1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ASIC4^ENSG00000072182.13 | chr2:219532725:+ | PPP4R1^ENSG00000154845.16 | chr18:9563493:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:31435:24288 | . | NO_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr2--chr18]""]" | chr2:219532725-chr18:9563493 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ASH1L-AS1--HSD17B14 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ASH1L-AS1^ENSG00000235919.4 | chr1:155563329:+ | HSD17B14^ENSG00000087076.9 | chr19:48815141:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:29558:5512 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:155563329-chr19:48815141 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ASB7--NAA35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ASB7^ENSG00000183475.13 | chr15:100630042:+ | NAA35^ENSG00000135040.16 | chr9:85974967:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:17973:17619 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr15--chr9]""]" | chr15:100630042-chr9:85974967 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARTN--NHLH1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARTN^ENSG00000117407.17 | chr1:43935716:+ | NHLH1^ENSG00000171786.6 | chr1:160372703:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:29784:20337 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6729 | "[""INTRACHROMOSOMAL[chr1:116.43Mb]""]" | chr1:43935716-chr1:160372703 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARSJ--AC092567.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARSJ^ENSG00000180801.14 | chr4:113978980:- | AC092567.1^ENSG00000226605.1 | chr2:62826072:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:26564:2121 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.2419 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:113978980-chr2:62826072 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARMC6--MRPS33 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ARMC6^ENSG00000105676.14 | chr19:19044074:+ | MRPS33^ENSG00000090263.16 | chr7:141006533:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1362:1639:6339 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr19--chr7]""]" | chr19:19044074-chr7:141006533 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARLNC1--CDYL2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARLNC1^ENSG00000260896.6 | chr16:80840119:- | CDYL2^ENSG00000166446.15 | chr16:80685129:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1244:50600:14634 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.585 | "[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21476]""]" | chr16:80840119-chr16:80685129 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARL3--EIF4E2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL3^ENSG00000138175.9 | chr10:102685816:- | EIF4E2^ENSG00000135930.14 | chr2:232564247:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:31507:1210 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:102685816-chr2:232564247 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL15--NDUFS4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL15^ENSG00000185305.11 | chr5:54310432:- | NDUFS4^ENSG00000164258.12 | chr5:53646233:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2480:8920:13261 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.20Mb]""]" | chr5:54310432-chr5:53646233 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARL13B--SRFBP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARL13B^ENSG00000169379.17 | chr3:94003908:+ | SRFBP1^ENSG00000151304.6 | chr5:122019260:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2158:30690:24148 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr3--chr5]""]" | chr3:94003908-chr5:122019260 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARL1--CEBPA | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARL1^ENSG00000120805.14 | chr12:101402865:- | CEBPA^ENSG00000245848.3 | chr19:33302352:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1322:44403:16315 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.053 | "[""INTERCHROMOSOMAL[chr12--chr19]""]" | chr12:101402865-chr19:33302352 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARID3C--DCTN3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARID3C^ENSG00000205143.3 | chr9:34627697:- | DCTN3^ENSG00000137100.16 | chr9:34618760:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:16339:20533 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7465 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr9:0.00Mb]"",""NEIGHBORS[856]""]" | chr9:34627697-chr9:34618760 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARHGEF35-AS1--ARHGEF5 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | ARHGEF35-AS1^ENSG00000244198.7 | chr7:144239388:+ | ARHGEF5^ENSG00000050327.15 | chr7:144362658:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:39525:19664 | . | YES_LDAS | 0.0008 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr7:0.07Mb]"",""NEIGHBORS[74741]""]" | chr7:144239388-chr7:144362658 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARHGAP42--AC073869.1 | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | ARHGAP42^ENSG00000165895.19 | chr11:100687832:+ | AC073869.1^ENSG00000273073.1 | chr2:131462125:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:46045:6689 | . | YES_LDAS | 0.0011 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:100687832-chr2:131462125 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARHGAP29-AS1--TMEM263 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP29-AS1^ENSG00000226835.3 | chr1:94249519:+ | TMEM263^ENSG00000151135.10 | chr12:106971105:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1469:49313:11229 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:94249519-chr12:106971105 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARHGAP19--SLIT1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARHGAP19^ENSG00000213390.11 | chr10:97229147:- | SLIT1^ENSG00000187122.17 | chr10:97164890:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2380:11727:8595 | . | NO_LDAS | 0.0034 | GT | 0.971 | AG | 1.8892 | "[""ConjoinG"",""Greger_Normal"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""NEIGHBORS[36214]""]" | chr10:97229147-chr10:97164890 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ARG1--AL163540.1 | 1 | 0 | 0.07 | 0.0 | ONLY_REF_SPLICE | ARG1^ENSG00000118520.15 | chr6:131547198:+ | AL163540.1^ENSG00000204790.9 | chr9:63986283:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:22689:3760 | . | YES_LDAS | 0.0002 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr9]""]" | chr6:131547198-chr9:63986283 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ARAF--AC019193.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ARAF^ENSG00000078061.14 | chrX:47563329:+ | AC019193.4^ENSG00000286821.1 | chr4:183020393:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:48140:4545 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chrX--chr4]""]" | chrX:47563329-chr4:183020393 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ARAF--ABITRAM | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ARAF^ENSG00000078061.14 | chrX:47563329:+ | ABITRAM^ENSG00000119328.12 | chr9:108936308:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:1154:13485 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:47563329-chr9:108936308 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APPL1--ALDH3B1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | APPL1^ENSG00000157500.12 | chr3:57273330:+ | ALDH3B1^ENSG00000006534.16 | chr11:68027749:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2162:19073:8623 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr3--chr11]""]" | chr3:57273330-chr11:68027749 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APIP--DEPDC7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | APIP^ENSG00000149089.13 | chr11:34916228:- | DEPDC7^ENSG00000121690.11 | chr11:33025659:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:9317:17002 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr11:1.82Mb]""]" | chr11:34916228-chr11:33025659 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| APH1A--RSPH6A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | APH1A^ENSG00000117362.13 | chr1:150267957:- | RSPH6A^ENSG00000104941.8 | chr19:45802195:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1239:43011:27693 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTERCHROMOSOMAL[chr1--chr19]""]" | chr1:150267957-chr19:45802195 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| APC--LYN | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | APC^ENSG00000134982.17 | chr5:112839105:+ | LYN^ENSG00000254087.8 | chr8:56010028:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2463:26799:9702 | . | NO_LDAS | 0.0034 | GT | 1.5546 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr5--chr8]""]" | chr5:112839105-chr8:56010028 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AP4B1--DNTTIP2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP4B1^ENSG00000134262.13 | chr1:113904605:- | DNTTIP2^ENSG00000067334.14 | chr1:93873214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:43917:11719 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:20.01Mb]""]" | chr1:113904605-chr1:93873214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP003778.1--MEIS2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP003778.1^ENSG00000287264.1 | chr11:59545975:+ | MEIS2^ENSG00000134138.20 | chr15:36950400:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:16031:18627 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:59545975-chr15:36950400 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP002472.1--RRAGC | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AP002472.1^ENSG00000266373.1 | chr18:3580579:+ | RRAGC^ENSG00000116954.8 | chr1:38859550:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1425:7545:2107 | . | NO_LDAS | 0.0017 | GT | 1.5546 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr18--chr1]""]" | chr18:3580579-chr1:38859550 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AP001924.1--ZNF407 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:121979703:- | ZNF407^ENSG00000215421.9 | chr18:74781428:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:23879:4699 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr11--chr18]""]" | chr11:121979703-chr18:74781428 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001924.1--UVRAG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:121979703:- | UVRAG^ENSG00000198382.9 | chr11:76065710:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:15926:23630 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr11:45.84Mb]""]" | chr11:121979703-chr11:76065710 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001924.1--GKAP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP001924.1^ENSG00000286023.1 | chr11:122025864:- | GKAP1^ENSG00000165113.13 | chr9:83753359:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:30011:21206 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr11--chr9]""]" | chr11:122025864-chr9:83753359 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001453.1--BAD | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AP001453.1^ENSG00000256116.1 | chr11:64234194:- | BAD^ENSG00000002330.14 | chr11:64271803:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:1251:13569 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.371 | "[""INTRACHROMOSOMAL[chr11:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[35478]""]" | chr11:64234194-chr11:64271803 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001122.1--AC097500.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001122.1^ENSG00000245008.4 | chr11:128651857:- | AC097500.1^ENSG00000287129.1 | chr2:185952902:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:8694:15503 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr11--chr2]""]" | chr11:128651857-chr2:185952902 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AP001029.2--PRELID3A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AP001029.2^ENSG00000267199.1 | chr18:12447619:+ | PRELID3A^ENSG00000141391.14 | chr18:12421540:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:6906:6521 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6652]""]" | chr18:12447619-chr18:12421540 | False | 0 | Excluded | annotation | pattern: | GTEx_recurrent_StarF2019 | FAIL | 1 | ||||||
| AOPEP--CYP27A1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AOPEP^ENSG00000148120.17 | chr9:95005616:+ | CYP27A1^ENSG00000135929.9 | chr2:218809577:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:44735:2962 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr9--chr2]""]" | chr9:95005616-chr2:218809577 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANXA6--FAM210B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANXA6^ENSG00000197043.14 | chr5:151117764:- | FAM210B^ENSG00000124098.10 | chr20:56358976:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:10562:16610 | . | YES_LDAS | 0.0034 | GC | 1.6895 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr5--chr20]""]" | chr5:151117764-chr20:56358976 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANTXR2--ITPR2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANTXR2^ENSG00000163297.18 | chr4:79977621:- | ITPR2^ENSG00000123104.12 | chr12:26655852:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2108:7432:26769 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:79977621-chr12:26655852 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD49--PFKFB2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKRD49^ENSG00000168876.9 | chr11:94498257:+ | PFKFB2^ENSG00000123836.15 | chr1:207054701:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2266:43586:17759 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr1]""]" | chr11:94498257-chr1:207054701 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD46--TMEM260 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD46^ENSG00000186106.11 | chr8:100559711:- | TMEM260^ENSG00000070269.14 | chr14:56585001:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2127:27794:9491 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr8--chr14]""]" | chr8:100559711-chr14:56585001 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD42--CCDC90B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD42^ENSG00000137494.14 | chr11:83211430:+ | CCDC90B^ENSG00000137500.9 | chr11:83278829:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:36378:23097 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1597]""]" | chr11:83211430-chr11:83278829 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD18DP--SCAPER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKRD18DP^ENSG00000226435.10 | chr3:198076796:- | SCAPER^ENSG00000140386.13 | chr15:76665789:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1274:29210:1126 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr3--chr15]""]" | chr3:198076796-chr15:76665789 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKRD13C--FAM106A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKRD13C^ENSG00000118454.13 | chr1:70336058:- | FAM106A^ENSG00000273018.7 | chr17:18524921:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:31216:28786 | . | NO_LDAS | 0.0034 | GT | 1.5301 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:70336058-chr17:18524921 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANKDD1B--POLK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANKDD1B^ENSG00000189045.15 | chr5:75625955:+ | POLK^ENSG00000122008.15 | chr5:75593878:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:51927:13233 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[10038]""]" | chr5:75625955-chr5:75593878 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ANKDD1A--PLEKHO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKDD1A^ENSG00000166839.17 | chr15:64934234:+ | PLEKHO2^ENSG00000241839.10 | chr15:64826338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:6331:21864 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr15:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[43900]""]" | chr15:64934234-chr15:64826338 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANKDD1A--LRP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ANKDD1A^ENSG00000166839.17 | chr15:64943582:+ | LRP4^ENSG00000134569.10 | chr11:46889536:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:6032:6773 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr11]""]" | chr15:64943582-chr11:46889536 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ANK3--RTKN2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ANK3^ENSG00000151150.22 | chr10:60615186:- | RTKN2^ENSG00000182010.11 | chr10:62199861:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1334:24938:29431 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr10:1.45Mb]""]" | chr10:60615186-chr10:62199861 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AMMECR1--UGCG | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AMMECR1^ENSG00000101935.11 | chrX:110317599:- | UGCG^ENSG00000148154.10 | chr9:111924777:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2265:38141:12728 | . | NO_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chrX--chr9]""]" | chrX:110317599-chr9:111924777 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AMMECR1--TMEM164 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AMMECR1^ENSG00000101935.11 | chrX:110264489:- | TMEM164^ENSG00000157600.12 | chrX:110171420:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1269:10368:12966 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""LOCAL_INVERSION:-:+:[11452]""]" | chrX:110264489-chrX:110171420 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALOX12-AS1--AL049569.3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALOX12-AS1^ENSG00000215067.10 | chr17:7009796:- | AL049569.3^ENSG00000288636.1 | chr1:17005778:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2389:11590:17100 | . | YES_LDAS | 0.0034 | GT | 1.9086 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:7009796-chr1:17005778 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALKBH3--ACCSL | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALKBH3^ENSG00000166199.13 | chr11:43901725:+ | ACCSL^ENSG00000205126.2 | chr11:44047996:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1151:32017:24765 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr11:0.13Mb]""]" | chr11:43901725-chr11:44047996 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALG6--AL162511.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALG6^ENSG00000088035.18 | chr1:63414146:+ | AL162511.1^ENSG00000258844.2 | chr14:36214300:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:29776:22957 | . | NO_LDAS | 0.0034 | GT | 1.7968 | AG | 0.6998 | "[""INTERCHROMOSOMAL[chr1--chr14]""]" | chr1:63414146-chr14:36214300 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ALG11--DUT | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ALG11^ENSG00000253710.5 | chr13:52030131:+ | DUT^ENSG00000128951.14 | chr15:48331462:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2477:19041:4951 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.6895 | "[""INTERCHROMOSOMAL[chr13--chr15]""]" | chr13:52030131-chr15:48331462 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ALDH9A1--RO60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ALDH9A1^ENSG00000143149.12 | chr1:165695252:- | RO60^ENSG00000116747.13 | chr1:193075820:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:50915:28997 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr1:27.36Mb]""]" | chr1:165695252-chr1:193075820 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL732372.2--AC215522.2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AL732372.2^ENSG00000237094.12 | chr1:514359:- | AC215522.2^ENSG00000282572.2 | chr7:21029:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2393:2820:11888 | . | YES_LDAS | 0.0008 | GT | 1.9086 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr1--chr7]""]" | chr1:514359-chr7:21029 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL731571.1--FNDC4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL731571.1^ENSG00000273599.1 | chr10:124999938:+ | FNDC4^ENSG00000115226.10 | chr2:27492790:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1342:45843:7824 | . | NO_LDAS | 0.0034 | GC | 1.5058 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr10--chr2]""]" | chr10:124999938-chr2:27492790 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL731567.1--MARCHF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL731567.1^ENSG00000231964.1 | chr10:45452844:- | MARCHF8^ENSG00000165406.16 | chr10:45464327:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1463:14130:11215 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1464]""]" | chr10:45452844-chr10:45464327 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL596202.1--SDE2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL596202.1^ENSG00000235381.1 | chr6:155254285:- | SDE2^ENSG00000143751.10 | chr1:225991254:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:23523:2065 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr6--chr1]""]" | chr6:155254285-chr1:225991254 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL591742.1--AC125807.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AL591742.1^ENSG00000270780.1 | chr1:114001640:- | AC125807.1^ENSG00000234589.4 | chr12:3071740:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2477:14591:6213 | . | NO_LDAS | 0.0011 | GT | 1.6729 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:114001640-chr12:3071740 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL590714.1--SNHG9 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL590714.1^ENSG00000224985.1 | chr1:161153898:- | SNHG9^ENSG00000255198.4 | chr16:1965406:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:43699:27960 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:161153898-chr16:1965406 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL512625.1--TELO2 | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | AL512625.1^ENSG00000170161.7 | chr9:62897734:+ | TELO2^ENSG00000100726.15 | chr16:1494281:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2319:9721:27876 | . | YES_LDAS | 0.0007 | GT | 1.6895 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr9--chr16]""]" | chr9:62897734-chr16:1494281 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL450322.2--WDR62 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL450322.2^ENSG00000229672.3 | chr10:3763430:+ | WDR62^ENSG00000075702.19 | chr19:36103003:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:23579:14578 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr10--chr19]""]" | chr10:3763430-chr19:36103003 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL445524.1--EGLN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL445524.1^ENSG00000233461.6 | chr1:231516305:- | EGLN1^ENSG00000135766.9 | chr1:231374099:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:46806:20869 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7819 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr1:0.10Mb]"",""NEIGHBORS[98442]""]" | chr1:231516305-chr1:231374099 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL391058.1--AC117481.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL391058.1^ENSG00000232499.2 | chr1:113449897:+ | AC117481.1^ENSG00000287398.1 | chr3:75214533:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:34970:1154 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr1--chr3]""]" | chr1:113449897-chr3:75214533 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL391056.1--GMPR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL391056.1^ENSG00000227619.3 | chr9:129582768:+ | GMPR^ENSG00000137198.10 | chr6:16254562:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2105:1340:4195 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr9--chr6]""]" | chr9:129582768-chr6:16254562 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AL391056.1--ATAD5 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AL391056.1^ENSG00000227619.3 | chr9:129582768:+ | ATAD5^ENSG00000176208.9 | chr17:30837206:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:48092:6983 | . | NO_LDAS | 0.0017 | GT | 1.9329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr9--chr17]""]" | chr9:129582768-chr17:30837206 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL358113.1--ZNF702P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL358113.1^ENSG00000285130.2 | chr9:69100061:+ | ZNF702P^ENSG00000242779.7 | chr19:52970842:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:15489:8917 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5656 | "[""INTERCHROMOSOMAL[chr9--chr19]""]" | chr9:69100061-chr19:52970842 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL357315.1--AC019080.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL357315.1^ENSG00000227535.2 | chr6:104842346:- | AC019080.1^ENSG00000213963.6 | chr2:177311032:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1231:29226:3620 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5058 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:104842346-chr2:177311032 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL356157.3--SLC35A5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL356157.3^ENSG00000287173.1 | chr10:44510360:+ | SLC35A5^ENSG00000138459.9 | chr3:112573889:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:44023:10781 | . | NO_LDAS | 0.0034 | GT | 1.8256 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr10--chr3]""]" | chr10:44510360-chr3:112573889 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL355379.1--JKAMP | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AL355379.1^ENSG00000217786.1 | chr6:79326596:- | JKAMP^ENSG00000050130.18 | chr14:59486731:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:33902:2611 | . | YES_LDAS | 0.0011 | GT | 1.7465 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr6--chr14]""]" | chr6:79326596-chr14:59486731 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL353576.1--PTER | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL353576.1^ENSG00000287925.1 | chr10:16527751:+ | PTER^ENSG00000165983.15 | chr10:16505020:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:32899:21780 | . | YES_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7969]""]" | chr10:16527751-chr10:16505020 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL353138.1--KHDC1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL353138.1^ENSG00000286811.1 | chr6:48111049:- | KHDC1^ENSG00000135314.12 | chr6:73242530:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2126:8386:19762 | . | YES_LDAS | 0.0034 | GT | 1.5301 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr6:25.13Mb]""]" | chr6:48111049-chr6:73242530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL160269.1--SLC35D2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL160269.1^ENSG00000285269.2 | chr9:96301951:- | SLC35D2^ENSG00000130958.13 | chr9:96368305:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2312:14866:14788 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4346]""]" | chr9:96301951-chr9:96368305 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL160269.1--SLC35D2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL160269.1^ENSG00000285269.2 | chr9:96298416:- | SLC35D2^ENSG00000130958.13 | chr9:96368305:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1153:52024:12532 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7819 | "[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4346]""]" | chr9:96298416-chr9:96368305 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL157911.1--RTN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL157911.1^ENSG00000258553.5 | chr14:60011157:- | RTN1^ENSG00000139970.17 | chr14:59746481:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1325:12698:3634 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.5628 | "[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr14:0.10Mb]"",""NEIGHBORS[98340]""]" | chr14:60011157-chr14:59746481 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AL157400.3--HMMR | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL157400.3^ENSG00000235100.4 | chr10:89701100:- | HMMR^ENSG00000072571.20 | chr5:163475458:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2433:2416:2135 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr5]""]" | chr10:89701100-chr5:163475458 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL139383.1--STARD13 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AL139383.1^ENSG00000230490.3 | chr13:33359465:- | STARD13^ENSG00000133121.21 | chr13:33167622:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1154:49168:27427 | . | YES_LDAS | 0.0017 | GT | 1.6895 | AG | 1.6402 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.00Mb]"",""NEIGHBORS[4576]""]" | chr13:33359465-chr13:33167622 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL139353.1--ZNF675 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL139353.1^ENSG00000203546.7 | chr14:31453275:- | ZNF675^ENSG00000197372.10 | chr19:23534298:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:25205:20925 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr19]""]" | chr14:31453275-chr19:23534298 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AL138778.1--AL136456.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL138778.1^ENSG00000286285.1 | chr1:193457750:+ | AL136456.1^ENSG00000227240.2 | chr1:193673210:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:42065:25774 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8026]""]" | chr1:193457750-chr1:193673210 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AL138756.1--SUSD1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL138756.1^ENSG00000259953.2 | chr9:112038179:- | SUSD1^ENSG00000106868.17 | chr9:112157613:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2228:50058:7950 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr9:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1640]""]" | chr9:112038179-chr9:112157613 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL133453.1--ARHGAP42 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL133453.1^ENSG00000258757.1 | chr14:52641006:+ | ARHGAP42^ENSG00000165895.19 | chr11:100992687:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1195:44848:10556 | . | YES_LDAS | 0.0034 | GT | 1.053 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:52641006-chr11:100992687 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL109615.2--SNX22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL109615.2^ENSG00000231881.2 | chr6:44071832:+ | SNX22^ENSG00000157734.14 | chr15:64156737:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2118:17868:28254 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr6--chr15]""]" | chr6:44071832-chr15:64156737 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL078600.1--PRKN | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL078600.1^ENSG00000287100.1 | chr6:119349974:+ | PRKN^ENSG00000185345.23 | chr6:162262765:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1306:3233:9435 | . | YES_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr6:41.96Mb]""]" | chr6:119349974-chr6:162262765 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL050309.1--KLF8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL050309.1^ENSG00000227486.2 | chrX:56014961:+ | KLF8^ENSG00000102349.18 | chrX:56265180:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1485:34921:18894 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chrX:0.02Mb]"",""NEIGHBORS[23085]""]" | chrX:56014961-chrX:56265180 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL049828.1--AKR1C1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AL049828.1^ENSG00000258526.7 | chr14:39470400:+ | AKR1C1^ENSG00000187134.14 | chr10:4967033:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:16112:9632 | . | NO_LDAS | 0.0017 | GT | 1.9656 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr14--chr10]""]" | chr14:39470400-chr10:4967033 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL049780.1--MLH3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL049780.1^ENSG00000258646.1 | chr14:75004735:- | MLH3^ENSG00000119684.16 | chr14:75049718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:22924:8370 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5288]""]" | chr14:75004735-chr14:75049718 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL034430.1--TASP1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL034430.1^ENSG00000285508.1 | chr20:10420528:- | TASP1^ENSG00000089123.16 | chr20:13587370:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2464:23215:24513 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr20:2.96Mb]""]" | chr20:10420528-chr20:13587370 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL033504.1--SAMD5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL033504.1^ENSG00000227681.5 | chr6:147733811:+ | SAMD5^ENSG00000203727.4 | chr6:147564394:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2157:24493:20813 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""LOCAL_REARRANGEMENT:+:[90682]""]" | chr6:147733811-chr6:147564394 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AL031595.3--SLC9A3R2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL031595.3^ENSG00000280434.1 | chr22:44144952:+ | SLC9A3R2^ENSG00000065054.14 | chr16:2029700:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:45722:8118 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.3753 | "[""INTERCHROMOSOMAL[chr22--chr16]""]" | chr22:44144952-chr16:2029700 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL022157.1--FAAH2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL022157.1^ENSG00000226310.1 | chrX:57127058:+ | FAAH2^ENSG00000165591.7 | chrX:57292498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2164:27786:7684 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5656 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.16Mb]""]" | chrX:57127058-chrX:57292498 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AL021707.2--MRPS35 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AL021707.2^ENSG00000228274.4 | chr22:38674891:- | MRPS35^ENSG00000061794.13 | chr12:27735447:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:43877:12014 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr22--chr12]""]" | chr22:38674891-chr12:27735447 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AL008729.1--TYW1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AL008729.1^ENSG00000215022.7 | chr6:13281429:- | TYW1B^ENSG00000277149.5 | chr7:72628997:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2484:42138:23574 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr6--chr7]""]" | chr6:13281429-chr7:72628997 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AKIP1--DPP8 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AKIP1^ENSG00000166452.12 | chr11:8912533:+ | DPP8^ENSG00000074603.19 | chr15:65474288:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1478:16420:5512 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr11--chr15]""]" | chr11:8912533-chr15:65474288 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AKAP10--ALG14 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AKAP10^ENSG00000108599.15 | chr17:19909234:- | ALG14^ENSG00000172339.10 | chr1:95064872:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2217:39444:4111 | . | NO_LDAS | 0.0017 | GT | 1.7968 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:19909234-chr1:95064872 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AGGF1--AGBL2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AGGF1^ENSG00000164252.13 | chr5:77036616:+ | AGBL2^ENSG00000165923.16 | chr11:47667581:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1144:43723:13373 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr5--chr11]""]" | chr5:77036616-chr11:47667581 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AF064860.1--PCP4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AF064860.1^ENSG00000225330.1 | chr21:39630490:+ | PCP4^ENSG00000183036.11 | chr21:39928984:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:48658:26657 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr21:0.14Mb]""]" | chr21:39630490-chr21:39928984 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AEN--BROX | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AEN^ENSG00000181026.15 | chr15:88629293:+ | BROX^ENSG00000162819.12 | chr1:222718925:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:29129:1210 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:88629293-chr1:222718925 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADSS2--AC007906.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADSS2^ENSG00000035687.10 | chr1:244418838:- | AC007906.2^ENSG00000277639.2 | chr16:53044186:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:36750:29431 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr1--chr16]""]" | chr1:244418838-chr16:53044186 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADO--AL356776.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | ADO^ENSG00000181915.5 | chr10:62805852:+ | AL356776.2^ENSG00000286340.1 | chr6:79078004:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:34112:16624 | . | NO_LDAS | 0.0017 | GT | 1.9086 | AG | 1.231 | "[""INTERCHROMOSOMAL[chr10--chr6]""]" | chr10:62805852-chr6:79078004 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ADD3--PLEKHO2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ADD3^ENSG00000148700.15 | chr10:110122212:+ | PLEKHO2^ENSG00000241839.10 | chr15:64848593:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:37494:2387 | . | YES_LDAS | 0.0034 | GT | 1.7232 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chr10--chr15]""]" | chr10:110122212-chr15:64848593 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADAMTS6--CENPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADAMTS6^ENSG00000049192.15 | chr5:65451475:- | CENPK^ENSG00000123219.13 | chr5:65554946:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1456:45875:14494 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr5:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[35846]""]" | chr5:65451475-chr5:65554946 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ADAMTS6--CENPK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ADAMTS6^ENSG00000049192.15 | chr5:65451475:- | CENPK^ENSG00000123219.13 | chr5:65554898:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1149:24291:7936 | . | YES_LDAS | 0.0034 | GT | 1.7968 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr5:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[35846]""]" | chr5:65451475-chr5:65554898 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACYP2--C2orf73 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACYP2^ENSG00000170634.13 | chr2:54138748:+ | C2orf73^ENSG00000177994.16 | chr2:54360203:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1138:2375:6521 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""NEIGHBORS[24734]""]" | chr2:54138748-chr2:54360203 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACYP1--MLH3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACYP1^ENSG00000119640.9 | chr14:75069210:- | MLH3^ENSG00000119684.16 | chr14:75049718:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:1032:19244 | . | YES_LDAS | 0.0034 | GT | 1.5628 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[1705]""]" | chr14:75069210-chr14:75049718 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ACYP1--CSTF3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACYP1^ENSG00000119640.9 | chr14:75063470:- | CSTF3^ENSG00000176102.13 | chr11:33141986:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:43699:6269 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr14--chr11]""]" | chr14:75063470-chr11:33141986 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACSL4--PPP1R2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACSL4^ENSG00000068366.20 | chrX:109696144:- | PPP1R2^ENSG00000184203.8 | chr3:195524896:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1116:12860:10949 | . | YES_LDAS | 0.0034 | GT | 1.6729 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chrX--chr3]""]" | chrX:109696144-chr3:195524896 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACSL1--ZBTB34 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACSL1^ENSG00000151726.15 | chr4:184773663:- | ZBTB34^ENSG00000177125.5 | chr9:126881764:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:39258:8441 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.5219 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:184773663-chr9:126881764 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACP7--GEMIN7-AS1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACP7^ENSG00000183760.11 | chr19:39084400:+ | GEMIN7-AS1^ENSG00000267348.3 | chr19:45091000:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:8071:4391 | . | NO_LDAS | 0.0034 | GT | 1.2729 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr19:5.97Mb]""]" | chr19:39084400-chr19:45091000 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACP6--TBC1D15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACP6^ENSG00000162836.12 | chr1:147648246:- | TBC1D15^ENSG00000121749.16 | chr12:71880469:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:16776:29501 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr1--chr12]""]" | chr1:147648246-chr12:71880469 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOXL--FBXL8 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACOXL^ENSG00000153093.20 | chr2:110732593:+ | FBXL8^ENSG00000135722.9 | chr16:67163662:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:52121:21276 | . | YES_LDAS | 0.0034 | GC | 1.5546 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr2--chr16]""]" | chr2:110732593-chr16:67163662 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOX3--PTPN13 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOX3^ENSG00000087008.16 | chr4:8389173:- | PTPN13^ENSG00000163629.13 | chr4:86750470:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:20335:12630 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr4:78.15Mb]""]" | chr4:8389173-chr4:86750470 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOT9--POLA1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOT9^ENSG00000123130.17 | chrX:23721881:- | POLA1^ENSG00000101868.13 | chrX:24699425:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2443:44815:26278 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chrX:0.93Mb]""]" | chrX:23721881-chrX:24699425 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACOT9--APOO | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACOT9^ENSG00000123130.17 | chrX:23743125:- | APOO^ENSG00000184831.14 | chrX:23880952:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1255:23256:18333 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.9899 | "[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[66878]""]" | chrX:23743125-chrX:23880952 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACER3--HMGB2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACER3^ENSG00000078124.13 | chr11:76861079:+ | HMGB2^ENSG00000164104.12 | chr4:173332995:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2253:37866:8861 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr11--chr4]""]" | chr11:76861079-chr4:173332995 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACER3--FCHSD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACER3^ENSG00000078124.13 | chr11:76926667:+ | FCHSD2^ENSG00000137478.15 | chr11:72989097:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45479:2878 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:3.72Mb]""]" | chr11:76926667-chr11:72989097 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACBD5--ARFGAP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACBD5^ENSG00000107897.20 | chr10:27204440:- | ARFGAP3^ENSG00000242247.11 | chr22:42817857:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:1461:2780 | . | NO_LDAS | 0.0034 | GT | 1.5329 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr10--chr22]""]" | chr10:27204440-chr22:42817857 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAT1--AC024451.4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACAT1^ENSG00000075239.14 | chr11:108140215:+ | AC024451.4^ENSG00000269924.1 | chr8:47527638:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:33942:6717 | . | NO_LDAS | 0.0034 | GT | 1.8295 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr11--chr8]""]" | chr11:108140215-chr8:47527638 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ACAD11--ZFAT | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ACAD11^ENSG00000240303.8 | chr3:132618634:- | ZFAT^ENSG00000066827.16 | chr8:134674888:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:16646:4251 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:132618634-chr8:134674888 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAD11--INSL6 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACAD11^ENSG00000240303.8 | chr3:132618634:- | INSL6^ENSG00000120210.8 | chr9:5133592:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2101:24655:7446 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr9]""]" | chr3:132618634-chr9:5133592 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACAD11--AL513493.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | ACAD11^ENSG00000240303.8 | chr3:132618634:- | AL513493.1^ENSG00000285079.1 | chr1:65710813:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:16646:4251 | . | YES_LDAS | 0.0017 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:132618634-chr1:65710813 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACACB--CWC15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ACACB^ENSG00000076555.15 | chr12:109258364:+ | CWC15^ENSG00000150316.12 | chr11:94963514:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2130:29088:15825 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:109258364-chr11:94963514 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ACACB--CCDC90B | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ACACB^ENSG00000076555.15 | chr12:109264406:+ | CCDC90B^ENSG00000137500.9 | chr11:83273433:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1186:17423:2037 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr12--chr11]""]" | chr12:109264406-chr11:83273433 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC253536.6--TIMM22 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC253536.6^ENSG00000272787.1 | chr22:23969682:+ | TIMM22^ENSG00000177370.5 | chr17:997171:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2167:24000:2079 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr22--chr17]""]" | chr22:23969682-chr17:997171 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC243964.1--PKD1P5 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC243964.1^ENSG00000224366.1 | chr19:44570548:- | PKD1P5^ENSG00000254681.6 | chr16:18387566:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2365:16759:28492 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr19--chr16]""]" | chr19:44570548-chr16:18387566 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC243562.1--AC044860.2 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AC243562.1^ENSG00000259570.1 | chr15:84395352:+ | AC044860.2^ENSG00000259270.1 | chr15:85178805:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1354:1307:6521 | . | YES_LDAS | 0.0007 | GT | 1.5628 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr15:0.78Mb]""]" | chr15:84395352-chr15:85178805 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.2--CDC14A | 1 | 0 | 0.17 | 0.0 | ONLY_REF_SPLICE | AC242842.2^ENSG00000284964.1 | chr1:149607554:+ | CDC14A^ENSG00000079335.20 | chr1:100424222:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:22010:15391 | . | YES_LDAS | 0.0006 | GT | 1.9329 | AG | 1.7056 | "[""INTRACHROMOSOMAL[chr1:49.09Mb]""]" | chr1:149607554-chr1:100424222 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.1--MAP3K1 | 1 | 0 | 0.2 | 0.0 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | MAP3K1^ENSG00000095015.6 | chr5:56856600:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2380:10150:4517 | . | YES_LDAS | 0.0007 | GT | 1.7819 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr1--chr5]""]" | chr1:149608516-chr5:56856600 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC242842.1--LINC00623 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC242842.1^ENSG00000275557.1 | chr1:149608516:+ | LINC00623^ENSG00000226067.7 | chr1:120952439:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1127:25877:22537 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTRACHROMOSOMAL[chr1:28.60Mb]""]" | chr1:149608516-chr1:120952439 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC239584.1--KNL1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC239584.1^ENSG00000249942.1 | chr4:74589364:- | KNL1^ENSG00000137812.20 | chr15:40602915:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1345:51530:8819 | . | NO_LDAS | 0.0034 | GC | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr15]""]" | chr4:74589364-chr15:40602915 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC139795.1--AC040168.1 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC139795.1^ENSG00000246596.7 | chr5:177626436:- | AC040168.1^ENSG00000246379.8 | chr16:56187700:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2476:12132:16946 | . | NO_LDAS | 0.0017 | GT | 1.6895 | AG | 1.7232 | "[""INTERCHROMOSOMAL[chr5--chr16]""]" | chr5:177626436-chr16:56187700 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC138393.1--AC015802.6 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC138393.1^ENSG00000229930.1 | chr1:224030704:- | AC015802.6^ENSG00000284526.1 | chr17:76564707:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:32300:8469 | . | NO_LDAS | 0.0011 | GT | 1.7819 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr1--chr17]""]" | chr1:224030704-chr17:76564707 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AC137761.2--STRBP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC137761.2^ENSG00000261719.1 | chr16:32811206:- | STRBP^ENSG00000165209.19 | chr9:123173842:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1443:4026:13135 | . | NO_LDAS | 0.0034 | GT | 1.4295 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr16--chr9]""]" | chr16:32811206-chr9:123173842 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC134878.2--RNF169 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC134878.2^ENSG00000278212.2 | chrY:11212744:- | RNF169^ENSG00000166439.6 | chr11:74834676:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2216:38012:21248 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7968 | "[""INTERCHROMOSOMAL[chrY--chr11]""]" | chrY:11212744-chr11:74834676 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC134878.2--PSMD14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC134878.2^ENSG00000278212.2 | chrY:11212744:- | PSMD14^ENSG00000115233.12 | chr2:161367478:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:21152:12616 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chrY--chr2]""]" | chrY:11212744-chr2:161367478 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC124944.1--HDAC1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC124944.1^ENSG00000231443.2 | chr3:195938123:+ | HDAC1^ENSG00000116478.12 | chr1:32332704:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1473:35585:11411 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.7819 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:195938123-chr1:32332704 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC120057.3--NBPF19 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC120057.3^ENSG00000279641.1 | chr17:7243696:+ | NBPF19^ENSG00000271383.7 | chr1:149501602:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:44710:24975 | . | YES_LDAS | 0.0034 | GT | 1.231 | AG | 0.971 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:7243696-chr1:149501602 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC117503.1--REEP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC117503.1^ENSG00000255839.1 | chr12:123708242:- | REEP3^ENSG00000165476.14 | chr10:63610187:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1283:27972:12266 | . | YES_LDAS | 0.0034 | GT | 1.8295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr12--chr10]""]" | chr12:123708242-chr10:63610187 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC117481.1--AL391058.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC117481.1^ENSG00000287398.1 | chr3:75214555:+ | AL391058.1^ENSG00000232499.2 | chr1:113450190:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:46692:14872 | . | YES_LDAS | 0.0017 | GT | 1.9086 | AG | 1.5301 | "[""INTERCHROMOSOMAL[chr3--chr1]""]" | chr3:75214555-chr1:113450190 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC115284.4--IQCF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC115284.4^ENSG00000287707.1 | chr3:51929275:- | IQCF1^ENSG00000173389.16 | chr3:51903089:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1197:47954:27287 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.5656 | "[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[23718]""]" | chr3:51929275-chr3:51903089 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC114489.1--SYNC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC114489.1^ENSG00000224409.1 | chr1:32725078:- | SYNC^ENSG00000162520.15 | chr1:32696044:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:45932:26334 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.4716 | "[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[14138]""]" | chr1:32725078-chr1:32696044 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC112493.1--AC107419.1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC112493.1^ENSG00000242021.2 | chrX:27158905:- | AC107419.1^ENSG00000228933.8 | chrX:27186657:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1277:2683:9884 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.7465 | "[""DEEPEST2019"",""INTRACHROMOSOMAL[chrX:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[1378]""]" | chrX:27158905-chrX:27186657 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC107956.1--CCNG1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC107956.1^ENSG00000197149.5 | chr11:17228656:+ | CCNG1^ENSG00000113328.19 | chr5:163439394:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1180:4891:16147 | . | YES_LDAS | 0.0017 | GT | 1.8323 | AG | 1.9219 | "[""INTERCHROMOSOMAL[chr11--chr5]""]" | chr11:17228656-chr5:163439394 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC106798.1--ELAPOR2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC106798.1^ENSG00000250421.5 | chr5:67818280:- | ELAPOR2^ENSG00000164659.15 | chr7:86947922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547 | . | YES_LDAS | 0.0008 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:67818280-chr7:86947922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC105219.1--DNAJC14 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC105219.1^ENSG00000254548.1 | chr8:143718783:- | DNAJC14^ENSG00000135392.19 | chr12:55828714:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2345:14260:25367 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr8--chr12]""]" | chr8:143718783-chr12:55828714 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC105052.5--AC004980.4 | 1 | 0 | 0.03 | 0.0 | INCL_NON_REF_SPLICE | AC105052.5^ENSG00000286830.1 | chr7:102703315:- | AC004980.4^ENSG00000250778.1 | chr7:76521938:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2369:22236:2331 | . | NO_LDAS | 0.0001 | GT | 1.8295 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:26.18Mb]""]" | chr7:102703315-chr7:76521938 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC104389.5--MICU2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC104389.5^ENSG00000239920.2 | chr11:5590825:- | MICU2^ENSG00000165487.14 | chr13:21522650:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1465:29946:20505 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr11--chr13]""]" | chr11:5590825-chr13:21522650 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC104117.3--ZNF454 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC104117.3^ENSG00000254035.1 | chr5:178969693:+ | ZNF454^ENSG00000178187.8 | chr5:178942685:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:8564:9533 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2957]""]" | chr5:178969693-chr5:178942685 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC104078.1--KIF17 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC104078.1^ENSG00000247193.3 | chr4:36248606:+ | KIF17^ENSG00000117245.13 | chr1:20717598:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:23393:7446 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr4--chr1]""]" | chr4:36248606-chr1:20717598 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC103923.1--ATG4C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC103923.1^ENSG00000235545.1 | chr1:62688652:+ | ATG4C^ENSG00000125703.15 | chr1:62803719:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2188:4891:3088 | . | YES_LDAS | 0.0034 | GC | 1.7819 | AG | 1.6895 | "[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.07Mb]"",""NEIGHBORS[73438]""]" | chr1:62688652-chr1:62803719 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC097493.3--LINC00882 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC097493.3^ENSG00000284648.1 | chr4:9532651:+ | LINC00882^ENSG00000242759.8 | chr3:106926285:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2488:9090:26054 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7056 | "[""INTERCHROMOSOMAL[chr4--chr3]""]" | chr4:9532651-chr3:106926285 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092902.2--AC134684.3 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092902.2^ENSG00000272840.1 | chr3:125797887:+ | AC134684.3^ENSG00000284617.1 | chr8:7610991:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2214:13944:1476 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr3--chr8]""]" | chr3:125797887-chr8:7610991 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092745.5--STARD13 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC092745.5^ENSG00000286895.1 | chr12:8251507:+ | STARD13^ENSG00000133121.21 | chr13:33167622:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1154:49168:27427 | . | YES_LDAS | 0.0017 | GT | 1.5329 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr12--chr13]""]" | chr12:8251507-chr13:33167622 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092279.1--SMIM20 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC092279.1^ENSG00000268362.6 | chr19:24050742:+ | SMIM20^ENSG00000250317.8 | chr4:25914293:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:3848:1336 | . | YES_LDAS | 0.0034 | GT | 1.7819 | AG | 1.5628 | "[""INTERCHROMOSOMAL[chr19--chr4]""]" | chr19:24050742-chr4:25914293 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC092032.2--PMS2CL | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC092032.2^ENSG00000288620.1 | chr7:4985075:+ | PMS2CL^ENSG00000187953.10 | chr7:6731897:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:45730:6423 | . | YES_LDAS | 0.0008 | GT | 1.7819 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr7:1.72Mb]""]" | chr7:4985075-chr7:6731897 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC091057.4--MIGA1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | MIGA1^ENSG00000180488.15 | chr1:77801331:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:18903:27497 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8062 | "[""INTERCHROMOSOMAL[chr15--chr1]""]" | chr15:30750556-chr1:77801331 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC091057.4--ARHGAP11B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | ARHGAP11B^ENSG00000285077.2 | chr15:30634409:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:45196:9842 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr15:0.12Mb]""]" | chr15:30750556-chr15:30634409 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC091057.4--ARHGAP11B | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC091057.4^ENSG00000284783.1 | chr15:30750556:+ | ARHGAP11B^ENSG00000285077.2 | chr15:30633490:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:33336:16568 | . | YES_LDAS | 0.0017 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr15:0.12Mb]""]" | chr15:30750556-chr15:30633490 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC090673.1--PTTG1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC090673.1^ENSG00000256083.1 | chr12:65942638:- | PTTG1^ENSG00000164611.13 | chr5:160422302:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2212:41021:8188 | . | NO_LDAS | 0.0034 | GT | 1.7819 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:65942638-chr5:160422302 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC090510.1--STARD9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC090510.1^ENSG00000246283.2 | chr15:42741563:+ | STARD9^ENSG00000159433.12 | chr15:42716677:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2268:34582:7011 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[18120]""]" | chr15:42741563-chr15:42716677 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC090159.1--KIF18A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC090159.1^ENSG00000255094.1 | chr11:28019472:- | KIF18A^ENSG00000121621.7 | chr11:28023850:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1407:26831:10402 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1044]""]" | chr11:28019472-chr11:28023850 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC090001.1--NTN4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC090001.1^ENSG00000258343.2 | chr12:95833017:- | NTN4^ENSG00000074527.13 | chr12:95787468:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1214:32511:24919 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS[544]""]" | chr12:95833017-chr12:95787468 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC087294.1--SRSF7 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC087294.1^ENSG00000235530.7 | chr17:21214450:+ | SRSF7^ENSG00000115875.19 | chr2:38748653:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:6024:13065 | . | YES_LDAS | 0.0034 | GT | 1.3383 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:21214450-chr2:38748653 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC087280.2--DCHS1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC087280.2^ENSG00000283415.2 | chr11:6924498:- | DCHS1^ENSG00000166341.9 | chr11:6634306:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2314:38772:14522 | . | YES_LDAS | 0.0034 | GT | 1.6895 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr11:0.17Mb]""]" | chr11:6924498-chr11:6634306 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC084781.1--SPDYE11 | 1 | 0 | 0.08 | 0.0 | INCL_NON_REF_SPLICE | AC084781.1^ENSG00000277229.1 | chr15:58454775:+ | SPDYE11^ENSG00000286228.1 | chr7:73056138:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1383:42566:3774 | . | NO_LDAS | 0.0003 | GT | 1.4295 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr15--chr7]""]" | chr15:58454775-chr7:73056138 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC083899.1--AC097527.1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC083899.1^ENSG00000204745.4 | chr2:87132117:+ | AC097527.1^ENSG00000237666.2 | chr2:106470935:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2471:25577:25690 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr2:19.27Mb]""]" | chr2:87132117-chr2:106470935 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC083899.1--AC097527.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC083899.1^ENSG00000204745.4 | chr2:87164658:+ | AC097527.1^ENSG00000237666.2 | chr2:106470935:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:1356:7390 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.5219 | "[""INTRACHROMOSOMAL[chr2:19.27Mb]""]" | chr2:87164658-chr2:106470935 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121449426:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:41685:3620 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121449426 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121487509:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:37664:6409 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121487509 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079841.2--POLQ | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC079841.2^ENSG00000287022.1 | chr3:121430389:- | POLQ^ENSG00000051341.14 | chr3:121433036:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:22002:1392 | . | YES_LDAS | 0.0034 | GT | 1.2419 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]" | chr3:121430389-chr3:121433036 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC079142.1--VCX | 1 | 0 | 0.33 | 0.0 | ONLY_REF_SPLICE | AC079142.1^ENSG00000285679.2 | chrX:8228405:+ | VCX^ENSG00000182583.12 | chrX:7843498:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:30520:10318 | . | YES_LDAS | 0.0011 | GT | 1.7465 | AG | 1.9329 | "[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[84300]""]" | chrX:8228405-chrX:7843498 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC078923.1--PPM1H | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC078923.1^ENSG00000258077.2 | chr12:75983721:- | PPM1H^ENSG00000111110.12 | chr12:62720289:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2242:5854:23420 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr12:12.63Mb]""]" | chr12:75983721-chr12:62720289 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC073488.1--ADGRF3 | 1 | 0 | 0.17 | 0.0 | INCL_NON_REF_SPLICE | AC073488.1^ENSG00000232111.2 | chrX:9404753:+ | ADGRF3^ENSG00000173567.15 | chr2:26313625:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2341:31079:18543 | . | NO_LDAS | 0.0006 | GT | 1.8892 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chrX--chr2]""]" | chrX:9404753-chr2:26313625 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC073316.1--CARD11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC073316.1^ENSG00000217455.8 | chr7:3158138:- | CARD11^ENSG00000198286.10 | chr7:2958631:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:28102:19552 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.8323 | "[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.10Mb]"",""NEIGHBORS[96367]""]" | chr7:3158138-chr7:2958631 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC073210.2--AC073261.1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC073210.2^ENSG00000239985.2 | chr7:65038427:+ | AC073261.1^ENSG00000224365.1 | chr7:66004028:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1357:32883:29179 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:0.97Mb]""]" | chr7:65038427-chr7:66004028 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068989.1--DDX60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC068989.1^ENSG00000287188.1 | chr4:168194397:- | DDX60^ENSG00000137628.18 | chr4:168237795:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1438:29873:20996 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]" | chr4:168194397-chr4:168237795 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068989.1--DDX60 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC068989.1^ENSG00000287188.1 | chr4:168194397:- | DDX60^ENSG00000137628.18 | chr4:168225676:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:17398:4041 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.7968 | "[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]" | chr4:168194397-chr4:168225676 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068633.1--LSAMP | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC068633.1^ENSG00000243276.6 | chr3:118077358:- | LSAMP^ENSG00000185565.12 | chr3:116485068:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:48949:24891 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr3:0.87Mb]""]" | chr3:118077358-chr3:116485068 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC068587.4--FAM86B1 | 1 | 0 | 0.11 | 0.0 | ONLY_REF_SPLICE | AC068587.4^ENSG00000283674.3 | chr8:12601158:- | FAM86B1^ENSG00000186523.14 | chr8:12189888:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:44662:11691 | . | YES_LDAS | 0.0004 | GT | 1.3996 | AG | 1.9899 | "[""INTRACHROMOSOMAL[chr8:0.29Mb]""]" | chr8:12601158-chr8:12189888 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC067942.1--AL358113.1 | 1 | 0 | 0.33 | 0.0 | INCL_NON_REF_SPLICE | AC067942.1^ENSG00000227304.3 | chr4:82495734:- | AL358113.1^ENSG00000285130.2 | chr9:69046456:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1392:30205:20673 | . | YES_LDAS | 0.0011 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr4--chr9]""]" | chr4:82495734-chr9:69046456 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC053527.2--ALB | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC053527.2^ENSG00000250220.1 | chr4:73259408:+ | ALB^ENSG00000163631.17 | chr4:73404369:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:42672:4713 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr4:0.08Mb]"",""NEIGHBORS[79161]""]" | chr4:73259408-chr4:73404369 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC026462.1--AL591043.2 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC026462.1^ENSG00000234337.4 | chr16:52655556:+ | AL591043.2^ENSG00000236021.2 | chr1:176417980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:18725:25423 | . | NO_LDAS | 0.0017 | GT | 1.8892 | AG | 1.2729 | "[""INTERCHROMOSOMAL[chr16--chr1]""]" | chr16:52655556-chr1:176417980 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC026391.1--BBOF1 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC026391.1^ENSG00000235140.2 | chr10:59596421:+ | BBOF1^ENSG00000119636.16 | chr14:74055584:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1114:46563:18431 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr10--chr14]""]" | chr10:59596421-chr14:74055584 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC025569.1--CNOT2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC025569.1^ENSG00000258168.6 | chr12:70510284:+ | CNOT2^ENSG00000111596.14 | chr12:70310895:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2163:6582:9379 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr12:0.11Mb]""]" | chr12:70510284-chr12:70310895 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC025171.3--UBE2Q2P2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC025171.3^ENSG00000251131.2 | chr5:43018672:+ | UBE2Q2P2^ENSG00000259429.5 | chr15:82419980:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:3217:5540 | . | NO_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr5--chr15]""]" | chr5:43018672-chr15:82419980 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC024581.1--ELAPOR2 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | AC024581.1^ENSG00000249894.1 | chr5:67889951:- | ELAPOR2^ENSG00000164659.15 | chr7:86947922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547 | . | YES_LDAS | 0.0008 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr5--chr7]""]" | chr5:67889951-chr7:86947922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC022400.4--TIMM23 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC022400.4^ENSG00000272140.2 | chr10:73713266:- | TIMM23^ENSG00000265354.4 | chr10:45975454:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:36321:22131 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr10:27.70Mb]""]" | chr10:73713266-chr10:45975454 | True | aih_curated_blacklist | score(3) | 0 | aih_curated_blacklist | score(3) | FAIL | 1 | ||||||
| AC022210.1--PSMD9 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC022210.1^ENSG00000287625.1 | chr2:84927396:+ | PSMD9^ENSG00000110801.14 | chr12:121915856:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2474:40269:2401 | . | YES_LDAS | 0.0034 | GT | 1.3996 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr2--chr12]""]" | chr2:84927396-chr12:121915856 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC022167.1--PMM2 | 1 | 0 | 0.5 | 0.0 | ONLY_REF_SPLICE | AC022167.1^ENSG00000259939.1 | chr16:8853636:+ | PMM2^ENSG00000140650.12 | chr16:8847724:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:14268:14564 | . | YES_LDAS | 0.0017 | GT | 1.9656 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3987]""]" | chr16:8853636-chr16:8847724 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC021851.2--MOB4 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.2^ENSG00000287621.1 | chr2:183334209:+ | MOB4^ENSG00000115540.15 | chr2:197535530:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1413:50632:15251 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr2:14.02Mb]""]" | chr2:183334209-chr2:197535530 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183188763:+ | NUP35^ENSG00000163002.13 | chr2:183157444:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11913:12056 | . | YES_LDAS | 0.0034 | GT | 0.9056 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183188763-chr2:183157444 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183188763:+ | NUP35^ENSG00000163002.13 | chr2:183151508:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:31782:23826 | . | YES_LDAS | 0.0034 | GT | 0.9056 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183188763-chr2:183151508 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183182680:+ | NUP35^ENSG00000163002.13 | chr2:183157444:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2268:17091:5218 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9086 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183182680-chr2:183157444 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC021851.1--NUP35 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC021851.1^ENSG00000272800.3 | chr2:183182680:+ | NUP35^ENSG00000163002.13 | chr2:183128287:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1156:19656:19552 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]" | chr2:183182680-chr2:183128287 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC019186.1--ACVR1C | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC019186.1^ENSG00000234584.1 | chr2:157735944:- | ACVR1C^ENSG00000123612.16 | chr2:157587417:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:5320:11930 | . | YES_LDAS | 0.0034 | GT | 1.9899 | AG | 1.8256 | "[""INTRACHROMOSOMAL[chr2:0.10Mb]"",""NEIGHBORS[96844]""]" | chr2:157735944-chr2:157587417 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC016907.2--ALK | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016907.2^ENSG00000233862.7 | chr2:30119768:- | ALK^ENSG00000171094.18 | chr2:29717697:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:6137:2920 | . | YES_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.13Mb]""]" | chr2:30119768-chr2:29717697 | True | pair|recurrent | breakpoints | aih_curated_blacklist | score(3) | 0 | Blacklisted; | aih_curated_blacklist | score(3) | FAIL | 1 | |||
| AC016831.1--SLC35F3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016831.1^ENSG00000226380.9 | chr7:130912110:- | SLC35F3^ENSG00000183780.13 | chr1:234231417:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:41863:16371 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.4295 | "[""INTERCHROMOSOMAL[chr7--chr1]""]" | chr7:130912110-chr1:234231417 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC016821.1--TSPAN15 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC016821.1^ENSG00000287306.1 | chr10:69511870:+ | TSPAN15^ENSG00000099282.10 | chr10:69483691:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:25003:13961 | . | YES_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8062 | "[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2500]""]" | chr10:69511870-chr10:69483691 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC016738.1--TXLNG | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC016738.1^ENSG00000223947.1 | chr2:100995464:- | TXLNG^ENSG00000086712.13 | chrX:16828100:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2412:31928:7964 | . | YES_LDAS | 0.0034 | GT | 1.5656 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr2--chrX]""]" | chr2:100995464-chrX:16828100 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC013477.1--PDGFC | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC013477.1^ENSG00000288637.1 | chr4:153276130:+ | PDGFC^ENSG00000145431.11 | chr4:156772893:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1204:15319:19272 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr4:3.35Mb]""]" | chr4:153276130-chr4:156772893 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC012615.1--SCAMP4 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC012615.1^ENSG00000261526.2 | chr19:1875954:- | SCAMP4^ENSG00000227500.10 | chr19:1917694:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:9001:11383 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.5546 | "[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""LOCAL_INVERSION:-:+:[29203]""]" | chr19:1875954-chr19:1917694 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC011632.1--ELAPOR2 | 1 | 0 | 0.25 | 0.0 | ONLY_REF_SPLICE | AC011632.1^ENSG00000253706.5 | chr8:74866865:- | ELAPOR2^ENSG00000164659.15 | chr7:86947922:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547 | . | YES_LDAS | 0.0008 | GT | 1.7465 | AG | 1.3996 | "[""INTERCHROMOSOMAL[chr8--chr7]""]" | chr8:74866865-chr7:86947922 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010768.3--STXBP1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010768.3^ENSG00000255106.1 | chr11:44540241:- | STXBP1^ENSG00000136854.24 | chr9:127695050:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1494:1049:9155 | . | NO_LDAS | 0.0034 | GT | 1.8062 | AG | 1.9329 | "[""INTERCHROMOSOMAL[chr11--chr9]""]" | chr11:44540241-chr9:127695050 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010538.1--SPATA33 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010538.1^ENSG00000275734.2 | chr16:89682496:+ | SPATA33^ENSG00000167523.14 | chr16:89669286:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:4729:17549 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[296]""]" | chr16:89682496-chr16:89669286 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010401.1--CDIN1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010401.1^ENSG00000262732.1 | chr16:13934190:- | CDIN1^ENSG00000186073.14 | chr15:36579948:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:7585:11537 | . | NO_LDAS | 0.0034 | GT | 1.053 | AG | 1.9656 | "[""INTERCHROMOSOMAL[chr16--chr15]""]" | chr16:13934190-chr15:36579948 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010327.4--GTF2H2C | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC010327.4^ENSG00000267577.1 | chr19:55160003:+ | GTF2H2C^ENSG00000183474.16 | chr5:69566612:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:3014:5862 | . | NO_LDAS | 0.0034 | GT | 1.8892 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr19--chr5]""]" | chr19:55160003-chr5:69566612 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| AC010255.2--SNCAIP | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010255.2^ENSG00000250803.6 | chr5:122129683:+ | SNCAIP^ENSG00000064692.20 | chr5:122391089:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2344:32292:26783 | . | YES_LDAS | 0.0034 | GT | 1.3753 | AG | 1.4295 | "[""INTRACHROMOSOMAL[chr5:0.13Mb]""]" | chr5:122129683-chr5:122391089 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC010198.2--YIPF5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC010198.2^ENSG00000285517.1 | chr12:30800021:+ | YIPF5^ENSG00000145817.17 | chr5:144165604:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1277:4527:15601 | . | YES_LDAS | 0.0034 | GT | 1.9219 | AG | 1.9899 | "[""INTERCHROMOSOMAL[chr12--chr5]""]" | chr12:30800021-chr5:144165604 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC009403.1--VPS26A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC009403.1^ENSG00000216895.9 | chr7:155643468:- | VPS26A^ENSG00000122958.15 | chr10:69132898:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1439:15368:14536 | . | YES_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr7--chr10]""]" | chr7:155643468-chr10:69132898 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC009093.8--RRN3P1 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC009093.8^ENSG00000284649.1 | chr16:29116326:+ | RRN3P1^ENSG00000248124.8 | chr16:21813759:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:22390:22327 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTRACHROMOSOMAL[chr16:7.29Mb]""]" | chr16:29116326-chr16:21813759 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC008667.2--PSD2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC008667.2^ENSG00000250692.1 | chr5:139855786:+ | PSD2^ENSG00000146005.4 | chr5:139833702:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1308:12844:18487 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7232 | "[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3824]""]" | chr5:139855786-chr5:139833702 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC008267.2--AC008267.5 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC008267.2^ENSG00000230189.7 | chr7:66450071:- | AC008267.5^ENSG00000244510.2 | chr7:66481599:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1493:19461:14704 | . | NO_LDAS | 0.0034 | GT | 1.8323 | AG | 1.8323 | "[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[26760]""]" | chr7:66450071-chr7:66481599 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC006435.2--ODF2L | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC006435.2^ENSG00000263345.1 | chr17:2377359:- | ODF2L^ENSG00000122417.15 | chr1:86387086:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:39492:1560 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.8295 | "[""INTERCHROMOSOMAL[chr17--chr1]""]" | chr17:2377359-chr1:86387086 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC005410.2--ZNF18 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC005410.2^ENSG00000266368.1 | chr17:11977248:- | ZNF18^ENSG00000154957.14 | chr17:11978744:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:20554:13989 | . | YES_LDAS | 0.0034 | GT | 1.8256 | AG | 1.5329 | "[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[155]""]" | chr17:11977248-chr17:11978744 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| AC005336.1--UBE2D1 | 1 | 0 | 0.5 | 0.0 | INCL_NON_REF_SPLICE | AC005336.1^ENSG00000267056.2 | chr19:15911549:- | UBE2D1^ENSG00000072401.15 | chr10:58361338:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:44654:14816 | . | YES_LDAS | 0.0017 | GT | 1.7056 | AG | 1.8256 | "[""INTERCHROMOSOMAL[chr19--chr10]""]" | chr19:15911549-chr10:58361338 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004967.1--ARL8B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AC004967.1^ENSG00000243554.1 | chr7:97972135:- | ARL8B^ENSG00000134108.14 | chr3:5172150:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:2391:4363 | . | NO_LDAS | 0.0034 | GT | 1.4566 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr7--chr3]""]" | chr7:97972135-chr3:5172150 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004951.2--AC004980.3 | 1 | 0 | 0.2 | 0.0 | INCL_NON_REF_SPLICE | AC004951.2^ENSG00000239556.4 | chr7:43986192:- | AC004980.3^ENSG00000230305.2 | chr7:76527766:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1202:32308:15321 | . | YES_LDAS | 0.0007 | GT | 1.9899 | AG | 1.7465 | "[""INTRACHROMOSOMAL[chr7:32.53Mb]""]" | chr7:43986192-chr7:76527766 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004596.1--AC132217.2 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AC004596.1^ENSG00000267394.1 | chr17:44198930:+ | AC132217.2^ENSG00000284779.2 | chr11:2135529:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2362:38619:19720 | . | YES_LDAS | 0.0034 | GT | 1.7056 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr17--chr11]""]" | chr17:44198930-chr11:2135529 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AC004129.3--XRCC1 | 1 | 0 | 0.25 | 0.0 | INCL_NON_REF_SPLICE | AC004129.3^ENSG00000285716.1 | chr7:25257101:- | XRCC1^ENSG00000073050.12 | chr19:43546683:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2387:31176:1476 | . | NO_LDAS | 0.0008 | GT | 1.7819 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr7--chr19]""]" | chr7:25257101-chr19:43546683 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| ABRAXAS1--CLEC7A | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABRAXAS1^ENSG00000163322.14 | chr4:83482154:- | CLEC7A^ENSG00000172243.18 | chr12:10125173:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1157:11582:21626 | . | NO_LDAS | 0.0034 | GT | 1.6402 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr4--chr12]""]" | chr4:83482154-chr12:10125173 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 1 | |||||||
| ABLIM2--MFSD11 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABLIM2^ENSG00000163995.21 | chr4:8158680:- | MFSD11^ENSG00000092931.11 | chr17:76738282:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1190:17544:19538 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr4--chr17]""]" | chr4:8158680-chr17:76738282 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCC11--MUC12 | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | ABCC11^ENSG00000121270.16 | chr16:48244319:- | MUC12^ENSG00000205277.9 | chr7:100993890:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2233:22835:7432 | . | YES_LDAS | 0.0034 | GT | 1.4716 | AG | 1.2867 | "[""INTERCHROMOSOMAL[chr16--chr7]""]" | chr16:48244319-chr7:100993890 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCC10--AHSA2P | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCC10^ENSG00000124574.15 | chr6:43441960:+ | AHSA2P^ENSG00000173209.23 | chr2:61178981:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:38748:26699 | . | YES_LDAS | 0.0034 | GT | 1.9329 | AG | 1.7465 | "[""INTERCHROMOSOMAL[chr6--chr2]""]" | chr6:43441960-chr2:61178981 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCB10--DENND1B | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCB10^ENSG00000135776.5 | chr1:229518841:- | DENND1B^ENSG00000213047.13 | chr1:197583253:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2150:39905:3368 | . | YES_LDAS | 0.0034 | GT | 1.7465 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr1:31.74Mb]""]" | chr1:229518841-chr1:197583253 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCA9-AS1--LAMP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCA9-AS1^ENSG00000231749.3 | chr17:69022467:+ | LAMP3^ENSG00000078081.8 | chr3:183124214:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2178:33481:22985 | . | NO_LDAS | 0.0034 | GT | 1.9329 | AG | 1.8323 | "[""INTERCHROMOSOMAL[chr17--chr3]""]" | chr17:69022467-chr3:183124214 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| ABCA11P--PLEKHH2 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | ABCA11P^ENSG00000251595.7 | chr4:472575:- | PLEKHH2^ENSG00000152527.14 | chr2:43745866:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2458:30278:18782 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.6402 | "[""INTERCHROMOSOMAL[chr4--chr2]""]" | chr4:472575-chr2:43745866 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AARSD1--KCNIP3 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | AARSD1^ENSG00000266967.7 | chr17:42955842:- | KCNIP3^ENSG00000115041.13 | chr2:95374296:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2312:36871:13135 | . | YES_LDAS | 0.0034 | GT | 1.9656 | AG | 1.9086 | "[""INTERCHROMOSOMAL[chr17--chr2]""]" | chr17:42955842-chr2:95374296 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| AACSP1--ZNF354A | 1 | 0 | 1.0 | 0.0 | INCL_NON_REF_SPLICE | AACSP1^ENSG00000250420.8 | chr5:178767130:- | ZNF354A^ENSG00000169131.13 | chr5:178749984:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:1663:13555 | . | NO_LDAS | 0.0034 | GC | 1.8256 | AG | 1.9219 | "[""INTRACHROMOSOMAL[chr5:0.03Mb]"",""NEIGHBORS[34202]""]" | chr5:178767130-chr5:178749984 | False | 0 | Excluded | SpliceType: | INCL_NON_REF_SPLICE | FAIL | 1 | |||||||
| A4GALT--C2orf76 | 1 | 0 | 1.0 | 0.0 | ONLY_REF_SPLICE | A4GALT^ENSG00000128274.17 | chr22:42720797:- | C2orf76^ENSG00000186132.15 | chr2:119339971:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:14260:20911 | . | YES_LDAS | 0.0034 | GT | 1.8892 | AG | 1.8892 | "[""INTERCHROMOSOMAL[chr22--chr2]""]" | chr22:42720797-chr2:119339971 | False | 0 | Read | count | too | low: | 1 | < | 8 | FAIL | 1 | |||
| MED20--USP49 | 1 | 1 | 1.0 | 0.33 | INCL_NON_REF_SPLICE | MED20^ENSG00000124641.16 | chr6:41907096:- | USP49^ENSG00000164663.14 | chr6:41871637:- | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1443:30577:28044 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:6113:17086 | YES_LDAS | 0.0045 | GT | 1.585 | AG | 1.4295 | "[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""NEIGHBORS[9993]""]" | chr6:41907096-chr6:41871637 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 2 | |||||||
| AC016526.2--ESRRB | 1 | 1 | 1.0 | 1.0 | ONLY_REF_SPLICE | AC016526.2^ENSG00000258454.1 | chr14:76252108:+ | ESRRB^ENSG00000119715.15 | chr14:76439341:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1157:13175:6843 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2237:40738:9379 | YES_LDAS | 0.0068 | GT | 1.5058 | AG | 1.9656 | "[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[47238]""]" | chr14:76252108-chr14:76439341 | False | 0 | Read | count | too | low: | 2 | < | 8 | FAIL | 2 | |||
| WASH5P--WASH6P | 1 | 3 | 1.0 | 0.33 | INCL_NON_REF_SPLICE | WASH5P^ENSG00000282458.1 | chr19:66346:- | WASH6P^ENSG00000182484.15 | chrX:156021691:+ | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:2196:33109:3676 | &FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1193:32478:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:1:1221:47793:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:11541:7292 | YES_LDAS | 0.0045 | GT | 1.9656 | AG | 1.7819 | "[""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chrX]""]" | chr19:66346-chrX:156021691 | True | pair|recurrent | breakpoints | 0 | Blacklisted | FAIL | 4 |
1763 rows