#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots DNAJC1--NEBL 382 0 382.00 0.00 ONLY_REF_SPLICE DNAJC1^ENSG00000136770.11 chr10:22003213:- NEBL^ENSG00000078114.19 chr10:21172477:- YES_LDAS 1.2962 GT 1.7968 AG 1.8062 ["INTRACHROMOSOMAL[chr10:0.46Mb]"] KANSL1--ARL17A 381 2 282.33 1.47 ONLY_REF_SPLICE KANSL1^ENSG00000120071.15 chr17:46094560:- ARL17A^ENSG00000185829.18 chr17:46570869:- YES_LDAS 0.963 GT 1.8892 AG 1.7056 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","INTRACHROMOSOMAL[chr17:0.29Mb]"] MMP24OS--IGH@-ext 124 0 109.94 0.00 INCL_NON_REF_SPLICE MMP24OS^ENSG00000126005.17 chr20:35277774:- IGH@-ext^IGH.g@-ext chr14:105605894:- NO_LDAS 0.3731 AG 1.2419 CC 1.5058 ["INTERCHROMOSOMAL[chr20--chr14]"] HLA-C--MUC16 86 0 86.00 0.00 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269489:- MUC16^ENSG00000181143.15 chr19:8848985:- NO_LDAS 0.2918 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr6--chr19]"] HLA-A--C12orf40 81 0 81.00 0.00 INCL_NON_REF_SPLICE HLA-A^ENSG00000206503.13 chr6:29942951:+ C12orf40^ENSG00000180116.15 chr12:39716794:+ NO_LDAS 0.2749 AT 1.5656 AC 1.7056 ["INTERCHROMOSOMAL[chr6--chr12]"] MUC6--XPNPEP2 69 0 69.00 0.00 INCL_NON_REF_SPLICE MUC6^ENSG00000184956.16 chr11:1023502:- XPNPEP2^ENSG00000122121.12 chrX:129768808:+ NO_LDAS 0.2341 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chrX]"] MECOM--RPL22 47 0 47.00 0.00 INCL_NON_REF_SPLICE MECOM^ENSG00000085276.19 chr3:169663336:- RPL22^ENSG00000116251.11 chr1:6197673:- NO_LDAS 0.1595 GT 1.8062 GG 1.9899 ["ChimerKB","chimerdb_omim","INTERCHROMOSOMAL[chr3--chr1]"] AC092691.1--LSAMP 41 0 41.00 0.00 ONLY_REF_SPLICE AC092691.1^ENSG00000239268.3 chr3:117997182:- LSAMP^ENSG00000185565.12 chr3:116444955:- YES_LDAS 0.1391 GT 1.8892 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.53Mb]"] BPTF--BSND 40 0 39.79 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ BSND^ENSG00000162399.9 chr1:55006997:+ NO_LDAS 0.135 GT 1.5628 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr1]"] LEPROT--LEPR 37 0 37.00 0.00 ONLY_REF_SPLICE LEPROT^ENSG00000213625.9 chr1:65425378:+ LEPR^ENSG00000116678.20 chr1:65565546:+ YES_LDAS 0.1256 GT 1.8256 AG 1.9219 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr1:0.09Mb]","NEIGHBORS[89682]"] HLA-L--HLA-V 35 0 27.93 0.00 ONLY_REF_SPLICE HLA-L^ENSG00000243753.5 chr6:30259697:+ HLA-V^ENSG00000181126.13 chr6:29792437:+ YES_LDAS 0.0948 GT 1.7056 AG 1.8323 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.46Mb]"] RBM14--RBM4 33 0 33.00 0.00 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ RBM4^ENSG00000173933.21 chr11:66639700:+ YES_LDAS 0.112 GT 1.7465 AG 1.9086 ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] HLA-C--NUMA1 33 0 33.00 0.00 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269493:- NUMA1^ENSG00000137497.18 chr11:72013673:- NO_LDAS 0.112 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr11]"] AC026191.1--SRGAP3 28 0 28.00 0.00 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- YES_LDAS 0.095 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[42903]"] SLC22A11--RNH1 27 0 26.35 0.00 INCL_NON_REF_SPLICE SLC22A11^ENSG00000168065.16 chr11:64556383:+ RNH1^ENSG00000023191.17 chr11:502144:- NO_LDAS 0.0894 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr11:64.05Mb]"] AC233699.1--TBC1D3B 27 0 3.73 0.00 ONLY_REF_SPLICE AC233699.1^ENSG00000261499.2 chr17:36320547:+ TBC1D3B^ENSG00000274808.5 chr17:36175051:- YES_LDAS 0.0127 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr17:0.10Mb]","LOCAL_INVERSION:+:-:[97555]"] SAA4--SAA1 23 0 23.00 0.00 ONLY_REF_SPLICE SAA4^ENSG00000148965.10 chr11:18232395:- SAA1^ENSG00000173432.12 chr11:18269717:+ YES_LDAS 0.078 GT 1.9329 AG 1.7819 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr11:0.03Mb]","LOCAL_INVERSION:-:+:[29458]"] PGC--KIR3DX1 22 0 11.00 0.00 INCL_NON_REF_SPLICE PGC^ENSG00000096088.16 chr6:41744393:- KIR3DX1^ENSG00000104970.11 chr19:54535836:+ NO_LDAS 0.0373 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr19]"] PGC--AMPD2 22 0 11.00 0.00 INCL_NON_REF_SPLICE PGC^ENSG00000096088.16 chr6:41744393:- AMPD2^ENSG00000116337.20 chr1:109621071:+ NO_LDAS 0.0373 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] ABLIM3--PTPRB 22 0 22.00 0.00 INCL_NON_REF_SPLICE ABLIM3^ENSG00000173210.20 chr5:149251419:+ PTPRB^ENSG00000127329.16 chr12:70558894:- NO_LDAS 0.0747 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr12]"] SEPTIN7P14--PSPH 20 0 12.55 0.00 ONLY_REF_SPLICE SEPTIN7P14^ENSG00000245958.6 chr4:119455133:+ PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.0426 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr7]"] OR51S1--TP53I11 19 0 19.00 0.00 INCL_NON_REF_SPLICE OR51S1^ENSG00000176922.4 chr11:4848669:- TP53I11^ENSG00000175274.19 chr11:44933050:- YES_LDAS 0.0645 GT 1.8295 AG 1.4256 ["INTRACHROMOSOMAL[chr11:40.04Mb]"] NUPR2--PSPH 19 0 13.62 0.00 ONLY_REF_SPLICE NUPR2^ENSG00000185290.4 chr7:56116015:- PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.0462 GT 1.8892 AG 1.9656 ["BodyMap","GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[63077]"] CHCHD10--AC005064.1 19 0 19.00 0.00 INCL_NON_REF_SPLICE CHCHD10^ENSG00000250479.9 chr22:23767834:- AC005064.1^ENSG00000234715.2 chr7:103446122:+ NO_LDAS 0.0645 GT 1.6402 AG 1.1589 ["INTERCHROMOSOMAL[chr22--chr7]"] MRPS18A--PDC-AS1 16 0 15.30 0.00 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- PDC-AS1^ENSG00000229739.4 chr1:186459293:+ YES_LDAS 0.0519 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] RN7SL732P--RN7SL128P 15 0 12.74 0.00 INCL_NON_REF_SPLICE RN7SL732P^ENSG00000264618.2 chrX:39786593:- RN7SL128P^ENSG00000240869.3 chr6:20421837:- YES_LDAS 0.0432 GT 1.8892 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chr6]"] RN7SL702P--RN7SL4P 15 0 12.32 0.00 INCL_NON_REF_SPLICE RN7SL702P^ENSG00000243980.3 chrY:12273695:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ YES_LDAS 0.0418 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrY--chr3]"] PCDHGB1--PCDHGA10 15 0 15.00 0.00 INCL_NON_REF_SPLICE PCDHGB1^ENSG00000254221.2 chr5:141352669:+ PCDHGA10^ENSG00000253846.2 chr5:141494807:+ YES_LDAS 0.0509 GT 1.6895 AG 1.3383 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr5:0.06Mb]","NEIGHBORS[60294]"] MALRD1--PLXDC2 15 0 15.00 0.00 INCL_NON_REF_SPLICE MALRD1^ENSG00000204740.11 chr10:19790186:+ PLXDC2^ENSG00000120594.17 chr10:20001775:+ YES_LDAS 0.0509 GT 1.8256 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.03Mb]","NEIGHBORS[25838]"] PAXBP1--GOLGA8A 14 0 7.00 0.00 INCL_NON_REF_SPLICE PAXBP1^ENSG00000159086.15 chr21:32771321:- GOLGA8A^ENSG00000175265.17 chr15:34381856:- NO_LDAS 0.0238 GT 1.2867 AG 1.8295 ["INTERCHROMOSOMAL[chr21--chr15]"] LEPROTL1--SMG1P3 14 0 14.00 0.00 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30104991:+ SMG1P3^ENSG00000180747.15 chr16:21487616:- YES_LDAS 0.0475 GC 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr16]"] SAMD5--SASH1 13 0 13.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ YES_LDAS 0.0441 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] ZBED3-AS1--PDE8B 12 0 12.00 0.00 ONLY_REF_SPLICE ZBED3-AS1^ENSG00000250802.7 chr5:77118521:+ PDE8B^ENSG00000113231.14 chr5:77311994:+ YES_LDAS 0.0407 GT 1.9329 AG 1.8256 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[43540]"] UGT1A1--MIB2 12 0 6.00 0.00 INCL_NON_REF_SPLICE UGT1A1^ENSG00000241635.8 chr2:233772345:+ MIB2^ENSG00000197530.12 chr1:1629246:+ NO_LDAS 0.0204 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr1]"] TPPP--BRD9 12 0 12.00 0.00 ONLY_REF_SPLICE TPPP^ENSG00000171368.12 chr5:693278:- BRD9^ENSG00000028310.18 chr5:879889:- YES_LDAS 0.0407 GT 1.8892 AG 1.5850 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.16Mb]"] UMAD1--GLCCI1 11 0 11.00 0.00 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.0373 GT 1.9656 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] CYP4B1--CYP4X1 11 0 11.00 0.00 ONLY_REF_SPLICE CYP4B1^ENSG00000142973.14 chr1:46815264:+ CYP4X1^ENSG00000186377.8 chr1:47029990:+ YES_LDAS 0.0373 GT 1.9329 AG 1.7465 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr1:0.20Mb]"] BANP--SNX29P1 11 0 5.50 0.00 ONLY_REF_SPLICE BANP^ENSG00000172530.20 chr16:88035394:+ SNX29P1^ENSG00000158482.10 chr16:21376648:+ YES_LDAS 0.0187 GT 1.5656 AG 1.8256 ["INTRACHROMOSOMAL[chr16:66.56Mb]"] FYN--CDH1 10 0 10.00 0.00 INCL_NON_REF_SPLICE FYN^ENSG00000010810.17 chr6:111873001:- CDH1^ENSG00000039068.20 chr16:68829654:+ NO_LDAS 0.0339 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr16]"] TVP23C--CDRT4 9 0 9.00 0.00 INCL_NON_REF_SPLICE TVP23C^ENSG00000175106.17 chr17:15503098:- CDRT4^ENSG00000239704.11 chr17:15440285:- YES_LDAS 0.0305 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] RN7SL828P--RN7SL4P 9 0 3.48 0.00 INCL_NON_REF_SPLICE RN7SL828P^ENSG00000272075.2 chr11:118067471:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ NO_LDAS 0.0118 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr3]"] RN7SL303P--RN7SL4P 9 0 1.73 0.00 INCL_NON_REF_SPLICE RN7SL303P^ENSG00000240116.3 chr8:22978059:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ NO_LDAS 0.0059 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr8--chr3]"] AC073107.1--PSPH 9 0 4.35 0.00 ONLY_REF_SPLICE AC073107.1^ENSG00000272693.4 chr7:65770467:- PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.0148 GT 1.9086 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:9.60Mb]"] VWF--TRIM52 8 0 4.00 0.00 INCL_NON_REF_SPLICE VWF^ENSG00000110799.14 chr12:5983213:- TRIM52^ENSG00000183718.5 chr5:181260273:- NO_LDAS 0.0136 GT 1.7232 AG 1.7232 ["INTERCHROMOSOMAL[chr12--chr5]"] VTI1A--AL158212.1 8 0 8.00 0.00 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112668998:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ YES_LDAS 0.0271 GT 1.7465 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.07Mb]","NEIGHBORS[69991]"] POU5F1--TYW1 8 0 8.00 0.00 ONLY_REF_SPLICE POU5F1^ENSG00000204531.20 chr6:31166534:- TYW1^ENSG00000198874.13 chr7:67067285:+ YES_LDAS 0.0271 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr7]"] MRPS18A--AC061975.8 8 0 1.70 0.00 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- AC061975.8^ENSG00000287721.1 chr17:28223196:+ YES_LDAS 0.0058 GT 1.7232 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr17]"] MIR3936HG--SERINC5 8 0 8.00 0.00 ONLY_REF_SPLICE MIR3936HG^ENSG00000233006.8 chr5:132332189:- SERINC5^ENSG00000164300.17 chr5:80203053:- YES_LDAS 0.0271 GT 1.9329 AG 1.5850 ["INTRACHROMOSOMAL[chr5:52.06Mb]"] KCNH5--NCOA3 8 0 8.00 0.00 INCL_NON_REF_SPLICE KCNH5^ENSG00000140015.20 chr14:62950140:- NCOA3^ENSG00000124151.19 chr20:47651081:+ NO_LDAS 0.0271 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr20]"] GNS--HLA-B 8 0 8.00 0.00 INCL_NON_REF_SPLICE GNS^ENSG00000135677.11 chr12:64715124:- HLA-B^ENSG00000234745.13 chr6:31354665:- NO_LDAS 0.0271 GT 1.6402 AG 1.2729 ["INTERCHROMOSOMAL[chr12--chr6]"] BPTF--XIST 8 0 1.21 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ XIST^ENSG00000229807.12 chrX:73849869:- NO_LDAS 0.0041 GT 1.5628 AG 1.5546 ["INTERCHROMOSOMAL[chr17--chrX]"] BOLA2B--SMG1 8 0 1.33 0.00 ONLY_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193358:- SMG1^ENSG00000157106.17 chr16:18879719:- YES_LDAS 0.0045 GT 1.9329 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:11.27Mb]"] AL139383.1--STARD13 8 0 8.00 0.00 ONLY_REF_SPLICE AL139383.1^ENSG00000230490.3 chr13:33359465:- STARD13^ENSG00000133121.21 chr13:33167622:- YES_LDAS 0.0271 GT 1.6895 AG 1.6402 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.00Mb]","NEIGHBORS[4576]"] TLK2--AC240565.1 7 0 0.89 0.00 ONLY_REF_SPLICE TLK2^ENSG00000146872.18 chr17:62560126:+ AC240565.1^ENSG00000280136.2 chr17:106864:- YES_LDAS 0.003 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr17:62.34Mb]"] SPATC1--IGL@-ext 7 0 7.00 0.00 INCL_NON_REF_SPLICE SPATC1^ENSG00000186583.12 chr8:144040803:+ IGL@-ext^IGL.g@-ext chr22:22895371:+ NO_LDAS 0.0238 CT 1.7232 AC 1.8256 ["INTERCHROMOSOMAL[chr8--chr22]"] RPL17--RPL17P12 7 0 7.00 0.00 INCL_NON_REF_SPLICE RPL17^ENSG00000265681.7 chr18:49491405:- RPL17P12^ENSG00000230559.1 chr2:146194373:+ NO_LDAS 0.0238 GT 1.9219 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTERCHROMOSOMAL[chr18--chr2]"] RN7SL326P--RN7SL4P 7 0 3.50 0.00 INCL_NON_REF_SPLICE RN7SL326P^ENSG00000264582.2 chr1:40805065:+ RN7SL4P^ENSG00000263740.2 chr3:15738559:+ YES_LDAS 0.0119 GT 1.9656 AG 1.5546 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr1--chr3]"] FOXO1--LINC00598 7 0 7.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40474095:- YES_LDAS 0.0238 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FBXO25--SEPTIN14 7 0 7.00 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0238 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] DDX11--MIR4307HG 7 0 6.43 0.00 INCL_NON_REF_SPLICE DDX11^ENSG00000013573.17 chr12:31100770:+ MIR4307HG^ENSG00000257612.2 chr14:26881418:+ NO_LDAS 0.0218 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr14]"] CMTM8--CMTM7 7 0 7.00 0.00 ONLY_REF_SPLICE CMTM8^ENSG00000170293.9 chr3:32239119:+ CMTM7^ENSG00000153551.14 chr3:32441840:+ YES_LDAS 0.0238 GT 1.9656 AG 1.9086 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.02Mb]","NEIGHBORS[21377]"] APLP2--CERS3 7 0 7.00 0.00 INCL_NON_REF_SPLICE APLP2^ENSG00000084234.18 chr11:130121799:+ CERS3^ENSG00000154227.14 chr15:100402823:- NO_LDAS 0.0238 GT 1.7819 AG 0.9968 ["INTERCHROMOSOMAL[chr11--chr15]"] AC008013.1--KDM2A 7 0 7.00 0.00 ONLY_REF_SPLICE AC008013.1^ENSG00000226472.8 chr12:30988464:- KDM2A^ENSG00000173120.15 chr11:67180079:+ NO_LDAS 0.0238 GC 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr11]"] ABCC3--GBF1 7 0 7.00 0.00 INCL_NON_REF_SPLICE ABCC3^ENSG00000108846.16 chr17:50669528:+ GBF1^ENSG00000107862.6 chr10:102256702:+ YES_LDAS 0.0238 GT 1.4295 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr10]"] SAMD5--AL033504.1 6 0 6.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147947472:+ YES_LDAS 0.0204 GT 1.8295 AG 1.5058 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] RN7SL674P--RN7SL494P 6 0 6.00 0.00 INCL_NON_REF_SPLICE RN7SL674P^ENSG00000239899.3 chr2:11584878:+ RN7SL494P^ENSG00000241175.3 chr15:50244810:- YES_LDAS 0.0204 GT 1.9086 AG 1.9656 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr2--chr15]"] PDXDC1--NPIPB12 6 0 2.33 0.00 INCL_NON_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15030056:+ NPIPB12^ENSG00000169203.16 chr16:29505872:- YES_LDAS 0.0079 GT 1.9329 AG 1.9329 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr16:14.34Mb]"] PDE4DIP--GRIP2 6 0 3.00 0.00 INCL_NON_REF_SPLICE PDE4DIP^ENSG00000178104.19 chr1:148966644:+ GRIP2^ENSG00000144596.13 chr3:14556044:- NO_LDAS 0.0102 GT 1.7968 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr3]"] INMT--MINDY4 6 0 6.00 0.00 ONLY_REF_SPLICE INMT^ENSG00000241644.2 chr7:30753938:+ MINDY4^ENSG00000106125.14 chr7:30778432:+ YES_LDAS 0.0204 GT 1.7056 AG 1.7968 ["INTRACHROMOSOMAL[chr7:0.01Mb]","NEIGHBORS[13815]"] DHX16--LINC00824 6 0 6.00 0.00 ONLY_REF_SPLICE DHX16^ENSG00000204560.10 chr6:30670410:- LINC00824^ENSG00000254275.6 chr8:128420823:- YES_LDAS 0.0204 GT 1.8062 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr8]"] C19orf25--DAZAP1 6 0 6.00 0.00 ONLY_REF_SPLICE C19orf25^ENSG00000119559.17 chr19:1478774:- DAZAP1^ENSG00000071626.17 chr19:1417500:+ YES_LDAS 0.0204 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.03Mb]","LOCAL_INVERSION:-:+:[25456]"] AGAP12P--FRMPD2 6 0 4.80 0.00 ONLY_REF_SPLICE AGAP12P^ENSG00000265018.6 chr10:48025897:- FRMPD2^ENSG00000170324.21 chr10:48181008:- YES_LDAS 0.0163 GT 1.7465 AG 1.5656 ["INTRACHROMOSOMAL[chr10:0.12Mb]"] AC104123.1--CAST 6 0 6.00 0.00 ONLY_REF_SPLICE AC104123.1^ENSG00000251314.2 chr5:96379652:+ CAST^ENSG00000153113.24 chr5:96675539:+ YES_LDAS 0.0204 GT 1.7819 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.11Mb]"] ZNF720--AC098826.1 5 0 0.83 0.00 ONLY_REF_SPLICE ZNF720^ENSG00000197302.10 chr16:31723353:+ AC098826.1^ENSG00000225594.1 chr2:132087289:+ NO_LDAS 0.0028 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr2]"] TLK2P1--AC110079.1 5 0 2.86 0.00 INCL_NON_REF_SPLICE TLK2P1^ENSG00000226049.3 chr17:34039043:- AC110079.1^ENSG00000260404.3 chr4:118595912:+ YES_LDAS 0.0097 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr4]"] SEPTIN14--AP006222.1 5 0 5.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:289370:- YES_LDAS 0.017 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr1]"] SCLT1--TNNT2 5 0 5.00 0.00 INCL_NON_REF_SPLICE SCLT1^ENSG00000151466.12 chr4:128871361:- TNNT2^ENSG00000118194.20 chr1:201372038:- NO_LDAS 0.017 GC 1.2867 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr1]"] RPL23AP53--SEPTIN14 5 0 5.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:232129:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.017 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] PGC--WHRN 5 0 2.50 0.00 INCL_NON_REF_SPLICE PGC^ENSG00000096088.16 chr6:41744393:- WHRN^ENSG00000095397.16 chr9:114406538:- NO_LDAS 0.0085 GT 1.9086 AG 1.6049 ["INTERCHROMOSOMAL[chr6--chr9]"] PCMTD1--PXDNL 5 0 5.00 0.00 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51831444:- PXDNL^ENSG00000147485.13 chr8:51654760:- YES_LDAS 0.017 GT 1.9329 AG 1.8256 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[8130]"] LILRA4--AC245884.12 5 0 5.00 0.00 ONLY_REF_SPLICE LILRA4^ENSG00000239961.3 chr19:54336841:- AC245884.12^ENSG00000276758.1 chr19:54296252:- YES_LDAS 0.017 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chr19:0.04Mb]","NEIGHBORS[36933]"] JUND--CCDC13 5 0 5.00 0.00 INCL_NON_REF_SPLICE JUND^ENSG00000130522.6 chr19:18280504:- CCDC13^ENSG00000244607.7 chr3:42739711:- NO_LDAS 0.017 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr3]"] FBXO25--AC240565.1 5 0 1.12 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ AC240565.1^ENSG00000280136.2 chr17:106864:- YES_LDAS 0.0038 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr17]"] AGAP5--AC022400.4 5 0 5.00 0.00 INCL_NON_REF_SPLICE AGAP5^ENSG00000172650.14 chr10:73692043:- AC022400.4^ENSG00000272140.2 chr10:73713332:- YES_LDAS 0.017 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:-:[5854]"] UQCRH--LRRN3 4 0 4.00 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ LRRN3^ENSG00000173114.13 chr7:111099895:+ NO_LDAS 0.0136 GT 1.7968 AG 0.9183 ["INTERCHROMOSOMAL[chr1--chr7]"] TOX4--AC108136.1 4 0 4.00 0.00 INCL_NON_REF_SPLICE TOX4^ENSG00000092203.15 chr14:21488708:+ AC108136.1^ENSG00000255325.2 chr8:122486583:- NO_LDAS 0.0136 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr8]"] SEPTIN14--AP006222.1 4 0 2.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:297502:- YES_LDAS 0.0068 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr1]"] SEPTIN14--AL031259.1 4 0 2.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AL031259.1^ENSG00000287411.1 chr6:170614324:+ YES_LDAS 0.0068 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr6]"] MALINC1--NRG2 4 0 4.00 0.00 ONLY_REF_SPLICE MALINC1^ENSG00000245146.7 chr5:140108473:- NRG2^ENSG00000158458.21 chr5:139887511:- YES_LDAS 0.0136 GT 1.7056 AG 1.6729 ["INTRACHROMOSOMAL[chr5:0.03Mb]","NEIGHBORS[28013]"] LINC01342--NR1D2 4 0 4.00 0.00 INCL_NON_REF_SPLICE LINC01342^ENSG00000223823.1 chr1:1140968:+ NR1D2^ENSG00000174738.13 chr3:23945513:+ NO_LDAS 0.0136 GT 1.5329 AG 0.9183 ["INTERCHROMOSOMAL[chr1--chr3]"] GALK2--FGF7 4 0 4.00 0.00 ONLY_REF_SPLICE GALK2^ENSG00000156958.15 chr15:49319805:+ FGF7^ENSG00000140285.12 chr15:49483151:+ YES_LDAS 0.0136 GT 1.8892 AG 1.7968 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr15:0.06Mb]","NEIGHBORS[55368]"] FAM157A--NOSIP 4 0 2.00 0.00 ONLY_REF_SPLICE FAM157A^ENSG00000236438.7 chr3:198210368:+ NOSIP^ENSG00000142546.14 chr19:49560692:- YES_LDAS 0.0068 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr19]"] AL445250.1--NOSIP 4 0 2.00 0.00 ONLY_REF_SPLICE AL445250.1^ENSG00000225096.3 chr6:57961742:+ NOSIP^ENSG00000142546.14 chr19:49560692:- YES_LDAS 0.0068 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr19]"] VPS45--PLEKHO1 3 0 3.00 0.00 ONLY_REF_SPLICE VPS45^ENSG00000136631.15 chr1:150110627:+ PLEKHO1^ENSG00000023902.14 chr1:150150912:+ YES_LDAS 0.0102 GT 1.4566 AG 1.8892 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS[3854]"] USP13--NUP85 3 0 3.00 0.00 ONLY_REF_SPLICE USP13^ENSG00000058056.10 chr3:179760426:+ NUP85^ENSG00000125450.11 chr17:75231340:+ YES_LDAS 0.0102 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"] TVP23C--CDRT4 3 0 3.00 0.00 INCL_NON_REF_SPLICE TVP23C^ENSG00000175106.17 chr17:15503098:- CDRT4^ENSG00000239704.11 chr17:15438200:- YES_LDAS 0.0102 GT 1.9329 AG 1.6402 ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] TMEM135--LINC00663 3 0 3.00 0.00 INCL_NON_REF_SPLICE TMEM135^ENSG00000166575.17 chr11:87236684:+ LINC00663^ENSG00000266904.6 chr19:19775161:- YES_LDAS 0.0102 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr19]"] TLR4--AL160272.1 3 0 3.00 0.00 ONLY_REF_SPLICE TLR4^ENSG00000136869.16 chr9:117704565:+ AL160272.1^ENSG00000284977.2 chr9:117848065:+ YES_LDAS 0.0102 GT 1.7968 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[34720]"] SNAI3-AS1--SEMA6A-AS1 3 0 3.00 0.00 INCL_NON_REF_SPLICE SNAI3-AS1^ENSG00000260630.7 chr16:88686547:+ SEMA6A-AS1^ENSG00000248445.5 chr5:116447585:+ NO_LDAS 0.0102 GT 1.4295 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr5]"] SLC7A5P1--SMG1 3 0 3.00 0.00 ONLY_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613103:- SMG1^ENSG00000157106.17 chr16:18900044:- YES_LDAS 0.0102 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr16:10.69Mb]"] RRBP1--AC091044.1 3 0 3.00 0.00 INCL_NON_REF_SPLICE RRBP1^ENSG00000125844.16 chr20:17660073:- AC091044.1^ENSG00000267196.1 chr18:49970952:- NO_LDAS 0.0102 GT 0.8366 AG 1.7056 ["INTERCHROMOSOMAL[chr20--chr18]"] RAB3GAP1--SMARCAL1 3 0 3.00 0.00 INCL_NON_REF_SPLICE RAB3GAP1^ENSG00000115839.18 chr2:135113241:+ SMARCAL1^ENSG00000138375.13 chr2:216450979:+ NO_LDAS 0.0102 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr2:81.24Mb]"] PPIP5K1--CDH8 3 0 3.00 0.00 INCL_NON_REF_SPLICE PPIP5K1^ENSG00000168781.22 chr15:43568463:- CDH8^ENSG00000150394.14 chr16:61918416:- YES_LDAS 0.0102 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr16]"] PDXDC1--RIPK1 3 0 3.00 0.00 INCL_NON_REF_SPLICE PDXDC1^ENSG00000179889.19 chr16:15001856:+ RIPK1^ENSG00000137275.16 chr6:3106798:+ NO_LDAS 0.0102 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr6]"] NLRP2--ADAMTS18 3 0 3.00 0.00 INCL_NON_REF_SPLICE NLRP2^ENSG00000022556.16 chr19:54982656:+ ADAMTS18^ENSG00000140873.16 chr16:77434801:- NO_LDAS 0.0102 GT 1.7819 AG 1.5628 ["INTERCHROMOSOMAL[chr19--chr16]"] MPI--SLC23A3 3 0 3.00 0.00 ONLY_REF_SPLICE MPI^ENSG00000178802.18 chr15:74897219:+ SLC23A3^ENSG00000213901.11 chr2:219169622:- YES_LDAS 0.0102 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr2]"] MIR4435-2HG--AC083899.1 3 0 3.00 0.00 ONLY_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111344061:- AC083899.1^ENSG00000204745.4 chr2:87125198:+ YES_LDAS 0.0102 GT 1.8295 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr2:23.81Mb]"] LILRB1--LILRA5 3 0 2.67 0.00 ONLY_REF_SPLICE LILRB1^ENSG00000104972.15 chr19:54631107:+ LILRA5^ENSG00000187116.14 chr19:54312370:- YES_LDAS 0.0091 GT 1.7819 AG 1.7465 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.30Mb]"] FKRP--RN7SL128P 3 0 1.17 0.00 INCL_NON_REF_SPLICE FKRP^ENSG00000181027.11 chr19:46757866:+ RN7SL128P^ENSG00000240869.3 chr6:20421811:- YES_LDAS 0.004 GT 1.9086 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr6]"] EWSR1--DOC2GP 3 0 3.00 0.00 INCL_NON_REF_SPLICE EWSR1^ENSG00000182944.18 chr22:29299721:+ DOC2GP^ENSG00000231793.5 chr11:67613605:- NO_LDAS 0.0102 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr11]"] EML5--EDEM3 3 0 3.00 0.00 ONLY_REF_SPLICE EML5^ENSG00000165521.15 chr14:88658187:- EDEM3^ENSG00000116406.19 chr1:184708344:- NO_LDAS 0.0102 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr1]"] COL1A2--HSD52 3 0 3.00 0.00 INCL_NON_REF_SPLICE COL1A2^ENSG00000164692.18 chr7:94397758:+ HSD52^ENSG00000224609.8 chr1:59292324:- NO_LDAS 0.0102 GT 1.9219 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr1]"] CLVS1--PLS3 3 0 1.50 0.00 ONLY_REF_SPLICE CLVS1^ENSG00000177182.11 chr8:61465804:+ PLS3^ENSG00000102024.18 chrX:115610243:+ YES_LDAS 0.0051 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chrX]"] CLCF1--POLD4 3 0 3.00 0.00 ONLY_REF_SPLICE CLCF1^ENSG00000175505.11 chr11:67373524:- POLD4^ENSG00000175482.9 chr11:67353077:- YES_LDAS 0.0102 GT 1.9086 AG 1.5058 ["ConjoinG","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[7196]"] CFAP74--ST7 3 0 3.00 0.00 INCL_NON_REF_SPLICE CFAP74^ENSG00000142609.18 chr1:1922177:- ST7^ENSG00000004866.22 chr7:117119693:+ NO_LDAS 0.0102 AT 1.8295 AC 1.9656 ["INTERCHROMOSOMAL[chr1--chr7]"] C1QTNF6--RSU1 3 0 1.50 0.00 INCL_NON_REF_SPLICE C1QTNF6^ENSG00000133466.14 chr22:37180610:- RSU1^ENSG00000148484.18 chr10:16764481:- NO_LDAS 0.0051 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr10]"] AL358790.1--PLS3 3 0 1.50 0.00 ONLY_REF_SPLICE AL358790.1^ENSG00000282772.1 chr10:102851508:- PLS3^ENSG00000102024.18 chrX:115610243:+ YES_LDAS 0.0051 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chrX]"] AL139383.1--STARD13 3 0 3.00 0.00 ONLY_REF_SPLICE AL139383.1^ENSG00000230490.3 chr13:33439691:- STARD13^ENSG00000133121.21 chr13:33167622:- YES_LDAS 0.0102 GT 1.6895 AG 1.6402 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.00Mb]","NEIGHBORS[4576]"] ACD--ATP8A2P2 3 0 3.00 0.00 INCL_NON_REF_SPLICE ACD^ENSG00000102977.17 chr16:67657762:- ATP8A2P2^ENSG00000229800.1 chr13:32478416:+ NO_LDAS 0.0102 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr16--chr13]"] AC211476.4--CCDC146 3 0 0.75 0.00 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73072670:+ CCDC146^ENSG00000135205.15 chr7:77236947:+ YES_LDAS 0.0025 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] AC044810.2--OVCH2 3 0 3.00 0.00 ONLY_REF_SPLICE AC044810.2^ENSG00000254951.7 chr11:7879007:- OVCH2^ENSG00000183378.12 chr11:7704674:- YES_LDAS 0.0102 GT 1.7056 AG 1.8256 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.05Mb]","NEIGHBORS[47972]"] AC004812.2--MAP3K9 3 0 3.00 0.00 INCL_NON_REF_SPLICE AC004812.2^ENSG00000277283.1 chr12:120117206:+ MAP3K9^ENSG00000006432.16 chr14:70809081:- NO_LDAS 0.0102 GT 1.2310 AG 0.9183 ["INTERCHROMOSOMAL[chr12--chr14]"] ZNF587B--SPIN1 2 0 0.67 0.00 INCL_NON_REF_SPLICE ZNF587B^ENSG00000269343.9 chr19:57840927:+ SPIN1^ENSG00000106723.17 chr9:88416644:+ NO_LDAS 0.0023 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr9]"] ZNF587B--AL034417.4 2 0 0.67 0.00 INCL_NON_REF_SPLICE ZNF587B^ENSG00000269343.9 chr19:57840927:+ AL034417.4^ENSG00000284747.1 chr1:8000606:+ NO_LDAS 0.0023 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF587B--AC012358.2 2 0 0.67 0.00 INCL_NON_REF_SPLICE ZNF587B^ENSG00000269343.9 chr19:57840927:+ AC012358.2^ENSG00000240401.9 chr2:55332139:+ NO_LDAS 0.0023 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr2]"] ZNF528--AC010332.1 2 0 2.00 0.00 ONLY_REF_SPLICE ZNF528^ENSG00000167555.14 chr19:52406643:+ AC010332.1^ENSG00000277977.1 chr19:52392659:+ YES_LDAS 0.0068 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:+:[5094]"] ZC3HAV1L--NINJ2-AS1 2 0 2.00 0.00 ONLY_REF_SPLICE ZC3HAV1L^ENSG00000146858.8 chr7:139026708:- NINJ2-AS1^ENSG00000177406.5 chr12:643959:+ YES_LDAS 0.0068 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr12]"] ZBTB38--AC240565.1 2 0 0.40 0.00 ONLY_REF_SPLICE ZBTB38^ENSG00000177311.11 chr3:141438365:+ AC240565.1^ENSG00000280136.2 chr17:106864:- NO_LDAS 0.0014 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"] ZBED3-AS1--PDE8B 2 0 2.00 0.00 INCL_NON_REF_SPLICE ZBED3-AS1^ENSG00000250802.7 chr5:77118521:+ PDE8B^ENSG00000113231.14 chr5:77311997:+ YES_LDAS 0.0068 GT 1.9329 AG 1.7819 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[43540]"] YIPF6--ZNF614 2 0 2.00 0.00 INCL_NON_REF_SPLICE YIPF6^ENSG00000181704.12 chrX:68499123:+ ZNF614^ENSG00000142556.19 chr19:52017673:- NO_LDAS 0.0068 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chrX--chr19]"] YAF2--RYBP 2 0 2.00 0.00 INCL_NON_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42238155:- RYBP^ENSG00000163602.11 chr3:72446621:- YES_LDAS 0.0068 GT 1.5656 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] USP32--CLTC 2 0 2.00 0.00 ONLY_REF_SPLICE USP32^ENSG00000170832.13 chr17:60391882:- CLTC^ENSG00000141367.12 chr17:59644276:+ YES_LDAS 0.0068 GT 1.6402 AG 1.9656 ["DEEPEST2019","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr17:0.48Mb]"] UPK3BP1--AC004980.4 2 0 0.10 0.00 INCL_NON_REF_SPLICE UPK3BP1^ENSG00000242435.1 chr7:77005775:+ AC004980.4^ENSG00000250778.1 chr7:76521938:+ NO_LDAS 0.0003 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.48Mb]"] UHMK1--PRR15L 2 0 2.00 0.00 INCL_NON_REF_SPLICE UHMK1^ENSG00000152332.16 chr1:162529325:+ PRR15L^ENSG00000167183.3 chr17:47952939:- YES_LDAS 0.0068 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr17]"] TSPAN15--AC016821.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE TSPAN15^ENSG00000099282.10 chr10:69504485:+ AC016821.1^ENSG00000287306.1 chr10:69511791:+ YES_LDAS 0.0068 GT 1.8892 AG 1.8323 ["INTRACHROMOSOMAL[chr10:0.00Mb]","NEIGHBORS[2500]"] TRIM23--C6orf62 2 0 2.00 0.00 ONLY_REF_SPLICE TRIM23^ENSG00000113595.15 chr5:65624194:- C6orf62^ENSG00000112308.13 chr6:24708911:- YES_LDAS 0.0068 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr6]"] TRBV5-4--TRBC1 2 0 1.00 0.00 ONLY_REF_SPLICE TRBV5-4^ENSG00000230099.2 chr7:142463165:+ TRBC1^ENSG00000211751.9 chr7:142791694:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.33Mb]"] TOMM7--STEAP1B 2 0 2.00 0.00 ONLY_REF_SPLICE TOMM7^ENSG00000196683.11 chr7:22818000:- STEAP1B^ENSG00000105889.16 chr7:22632922:- YES_LDAS 0.0068 GT 1.9656 AG 1.7819 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.09Mb]","NEIGHBORS[85015]"] TNFAIP8--HSD17B4 2 0 2.00 0.00 INCL_NON_REF_SPLICE TNFAIP8^ENSG00000145779.8 chr5:119268907:+ HSD17B4^ENSG00000133835.17 chr5:119412972:+ YES_LDAS 0.0068 GT 1.7232 AG 1.9656 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr5:0.05Mb]","NEIGHBORS[52785]"] TMCO2--HKDC1 2 0 2.00 0.00 ONLY_REF_SPLICE TMCO2^ENSG00000188800.6 chr1:40247448:+ HKDC1^ENSG00000156510.13 chr10:69232764:+ NO_LDAS 0.0068 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr10]"] TMCC3--CEP83 2 0 2.00 0.00 ONLY_REF_SPLICE TMCC3^ENSG00000057704.13 chr12:94650353:- CEP83^ENSG00000173588.15 chr12:94379042:- YES_LDAS 0.0068 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr12:0.11Mb]"] STAG3L4--CDKL5 2 0 2.00 0.00 ONLY_REF_SPLICE STAG3L4^ENSG00000106610.15 chr7:67309715:+ CDKL5^ENSG00000008086.13 chrX:18608811:+ YES_LDAS 0.0068 GT 1.3383 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chrX]"] SMARCA1--AL008633.1 2 0 2.00 0.00 ONLY_REF_SPLICE SMARCA1^ENSG00000102038.16 chrX:129448333:- AL008633.1^ENSG00000225689.2 chrX:129122193:- YES_LDAS 0.0068 GT 1.7465 AG 1.8256 ["INTRACHROMOSOMAL[chrX:0.12Mb]"] SLTM--PLCL1 2 0 2.00 0.00 INCL_NON_REF_SPLICE SLTM^ENSG00000137776.17 chr15:58912559:- PLCL1^ENSG00000115896.16 chr2:198146823:+ NO_LDAS 0.0068 GT 1.7968 AG 1.5546 ["INTERCHROMOSOMAL[chr15--chr2]"] SLC43A1--SERPING1 2 0 2.00 0.00 ONLY_REF_SPLICE SLC43A1^ENSG00000149150.9 chr11:57513958:- SERPING1^ENSG00000149131.17 chr11:57602035:+ YES_LDAS 0.0068 GT 1.7465 AG 1.6402 ["INTRACHROMOSOMAL[chr11:0.08Mb]","LOCAL_INVERSION:-:+:[81607]"] SIRPA--MFSD12 2 0 2.00 0.00 INCL_NON_REF_SPLICE SIRPA^ENSG00000198053.12 chr20:1927899:+ MFSD12^ENSG00000161091.13 chr19:3573589:- NO_LDAS 0.0068 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr19]"] SIPA1L2--CDKAL1 2 0 2.00 0.00 ONLY_REF_SPLICE SIPA1L2^ENSG00000116991.11 chr1:232460887:- CDKAL1^ENSG00000145996.11 chr6:21230848:+ YES_LDAS 0.0068 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr6]"] SAMD5--AL033504.1 2 0 2.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147733729:+ YES_LDAS 0.0068 GT 1.8295 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] RPL23AP53--SEPTIN14 2 0 2.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:219290:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0068 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] RCOR1--MID1 2 0 2.00 0.00 INCL_NON_REF_SPLICE RCOR1^ENSG00000089902.10 chr14:102593325:+ MID1^ENSG00000101871.16 chrX:10553220:- YES_LDAS 0.0068 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chrX]"] RASSF8--SSPN 2 0 2.00 0.00 ONLY_REF_SPLICE RASSF8^ENSG00000123094.15 chr12:26055446:+ SSPN^ENSG00000123096.12 chr12:26224293:+ YES_LDAS 0.0068 GT 1.9219 AG 1.8256 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr12:0.04Mb]","NEIGHBORS[42099]"] RASGEF1A--GRTP1 2 0 2.00 0.00 INCL_NON_REF_SPLICE RASGEF1A^ENSG00000198915.12 chr10:43195782:- GRTP1^ENSG00000139835.14 chr13:113355417:- YES_LDAS 0.0068 GT 1.3996 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr13]"] PTPN2--NPIPB10P 2 0 0.17 0.00 ONLY_REF_SPLICE PTPN2^ENSG00000175354.20 chr18:12869025:- NPIPB10P^ENSG00000196796.5 chr16:29050502:+ YES_LDAS 0.0006 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr16]"] PSPC1--ZMYM5 2 0 2.00 0.00 ONLY_REF_SPLICE PSPC1^ENSG00000121390.19 chr13:19741565:- ZMYM5^ENSG00000132950.19 chr13:19835689:- YES_LDAS 0.0068 GT 1.7232 AG 1.9899 ["TumorFusionsNAR2018","ChimerSeq","CCLE_StarF2019","INTRACHROMOSOMAL[chr13:0.04Mb]","LOCAL_REARRANGEMENT:-:[40463]"] PRSS53--VKORC1 2 0 2.00 0.00 ONLY_REF_SPLICE PRSS53^ENSG00000151006.7 chr16:31087537:- VKORC1^ENSG00000167397.15 chr16:31091342:- YES_LDAS 0.0068 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:-:[1214]"] PPP3R1--FEZ2 2 0 2.00 0.00 ONLY_REF_SPLICE PPP3R1^ENSG00000221823.11 chr2:68217092:- FEZ2^ENSG00000171055.15 chr2:36591011:- NO_LDAS 0.0068 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr2:31.53Mb]"] PPP1R8--AC010991.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE PPP1R8^ENSG00000117751.18 chr1:27843303:+ AC010991.1^ENSG00000235431.2 chr7:9984883:+ NO_LDAS 0.0068 GT 1.9899 AG 1.3383 ["INTERCHROMOSOMAL[chr1--chr7]"] PPIP5K1--CATSPER2P1 2 0 2.00 0.00 ONLY_REF_SPLICE PPIP5K1^ENSG00000168781.22 chr15:43568463:- CATSPER2P1^ENSG00000205771.6 chr15:43737008:- YES_LDAS 0.0068 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.14Mb]"] PML--TMEM240 2 0 1.00 0.00 INCL_NON_REF_SPLICE PML^ENSG00000140464.20 chr15:74035892:+ TMEM240^ENSG00000205090.9 chr1:1540551:- NO_LDAS 0.0034 GT 1.3710 AG 1.5058 ["INTERCHROMOSOMAL[chr15--chr1]"] PET100--KRT18P55 2 0 2.00 0.00 INCL_NON_REF_SPLICE PET100^ENSG00000229833.10 chr19:7630846:+ KRT18P55^ENSG00000265480.5 chr17:28276963:- NO_LDAS 0.0068 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr17]"] PDE4DIPP2--AC239804.1 2 0 1.00 0.00 INCL_NON_REF_SPLICE PDE4DIPP2^ENSG00000275131.3 chr1:120489811:- AC239804.1^ENSG00000254539.1 chr1:149050820:+ YES_LDAS 0.0034 GT 1.3383 AG 1.5546 ["INTRACHROMOSOMAL[chr1:28.35Mb]"] PDE11A--KBTBD2 2 0 2.00 0.00 INCL_NON_REF_SPLICE PDE11A^ENSG00000128655.18 chr2:177728155:- KBTBD2^ENSG00000170852.11 chr7:32869662:- NO_LDAS 0.0068 GT 1.8295 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr7]"] PCNX4--TTLL5 2 0 2.00 0.00 ONLY_REF_SPLICE PCNX4^ENSG00000126773.13 chr14:60092419:+ TTLL5^ENSG00000119685.20 chr14:75764615:+ YES_LDAS 0.0068 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr14:15.46Mb]"] PCMTD1--PXDNL 2 0 2.00 0.00 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51898930:- PXDNL^ENSG00000147485.13 chr8:51654760:- YES_LDAS 0.0068 GT 1.6402 AG 1.8256 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[8130]"] PAM16--ASIC1 2 0 2.00 0.00 INCL_NON_REF_SPLICE PAM16^ENSG00000217930.8 chr16:4343488:- ASIC1^ENSG00000110881.12 chr12:50080004:+ NO_LDAS 0.0068 GT 1.3710 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr12]"] NR2F1-AS1--SLC4A7 2 0 2.00 0.00 ONLY_REF_SPLICE NR2F1-AS1^ENSG00000237187.9 chr5:93544795:- SLC4A7^ENSG00000033867.16 chr3:27437526:- YES_LDAS 0.0068 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr3]"] NPR3--OSBPL9 2 0 2.00 0.00 INCL_NON_REF_SPLICE NPR3^ENSG00000113389.16 chr5:32783374:+ OSBPL9^ENSG00000117859.19 chr1:51786571:+ NO_LDAS 0.0068 GT 1.7232 AG 1.2729 ["INTERCHROMOSOMAL[chr5--chr1]"] NELL2--CLEC2D 2 0 2.00 0.00 ONLY_REF_SPLICE NELL2^ENSG00000184613.11 chr12:44774747:- CLEC2D^ENSG00000069493.15 chr12:9687902:+ YES_LDAS 0.0068 GT 1.7465 AG 1.8295 ["INTRACHROMOSOMAL[chr12:34.81Mb]"] MYH6--MYH9 2 0 2.00 0.00 ONLY_REF_SPLICE MYH6^ENSG00000197616.13 chr14:23404296:- MYH9^ENSG00000100345.22 chr22:36321821:- NO_LDAS 0.0068 GT 1.6895 AG 1.9899 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr14--chr22]"] MTURN--ZNRF2 2 0 2.00 0.00 ONLY_REF_SPLICE MTURN^ENSG00000180354.16 chr7:30135298:+ ZNRF2^ENSG00000180233.11 chr7:30323642:+ YES_LDAS 0.0068 GT 1.9656 AG 1.9656 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.12Mb]"] MLYCD--KIDINS220 2 0 2.00 0.00 ONLY_REF_SPLICE MLYCD^ENSG00000103150.7 chr16:83948332:+ KIDINS220^ENSG00000134313.16 chr2:8806369:- NO_LDAS 0.0068 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr2]"] METTL6--ID2 2 0 2.00 0.00 INCL_NON_REF_SPLICE METTL6^ENSG00000206562.12 chr3:15413811:- ID2^ENSG00000115738.10 chr2:8682128:+ YES_LDAS 0.0068 GT 1.7819 AG 1.5546 ["INTERCHROMOSOMAL[chr3--chr2]"] ME2--CFDP1 2 0 2.00 0.00 ONLY_REF_SPLICE ME2^ENSG00000082212.13 chr18:50945260:+ CFDP1^ENSG00000153774.9 chr16:75305182:- NO_LDAS 0.0068 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr18--chr16]"] MCM9--CEP85L 2 0 2.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118826147:- CEP85L^ENSG00000111860.14 chr6:118652808:- YES_LDAS 0.0068 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.10Mb]"] MANBA--PRIM2 2 0 2.00 0.00 ONLY_REF_SPLICE MANBA^ENSG00000109323.11 chr4:102760718:- PRIM2^ENSG00000146143.19 chr6:57379901:+ NO_LDAS 0.0068 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr6]"] LINC02802--AC245060.4 2 0 0.67 0.00 ONLY_REF_SPLICE LINC02802^ENSG00000232527.8 chr1:144250225:- AC245060.4^ENSG00000272779.1 chr22:22303224:+ YES_LDAS 0.0023 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr22]"] LINC02614--ZNF517 2 0 2.00 0.00 ONLY_REF_SPLICE LINC02614^ENSG00000241288.8 chr3:125888583:- ZNF517^ENSG00000197363.9 chr8:144802870:+ NO_LDAS 0.0068 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr8]"] LINC02506--SCNM1 2 0 2.00 0.00 ONLY_REF_SPLICE LINC02506^ENSG00000251129.2 chr4:32155406:+ SCNM1^ENSG00000163156.12 chr1:151166471:+ YES_LDAS 0.0068 GT 1.9329 AG 1.5628 ["INTERCHROMOSOMAL[chr4--chr1]"] LINC00680--GUSBP4 2 0 2.00 0.00 ONLY_REF_SPLICE LINC00680^ENSG00000215190.9 chr6:57961152:- GUSBP4^ENSG00000239650.4 chr6:57930291:- YES_LDAS 0.0068 GT 1.3383 AG 1.9656 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr6:0.02Mb]","NEIGHBORS[15783]"] LENG8--AC022748.2 2 0 2.00 0.00 INCL_NON_REF_SPLICE LENG8^ENSG00000167615.17 chr19:54453656:+ AC022748.2^ENSG00000261303.6 chr15:78734645:+ NO_LDAS 0.0068 GT 1.9329 AG 1.5546 ["INTERCHROMOSOMAL[chr19--chr15]"] KRTAP5-AS1--AP000867.5 2 0 2.00 0.00 INCL_NON_REF_SPLICE KRTAP5-AS1^ENSG00000233930.4 chr11:1598289:+ AP000867.5^ENSG00000286948.1 chr11:71563684:- YES_LDAS 0.0068 GT 1.6895 AG 1.8295 ["INTRACHROMOSOMAL[chr11:69.96Mb]"] IMPDH1--AC004623.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE IMPDH1^ENSG00000106348.18 chr7:128409756:- AC004623.1^ENSG00000279488.1 chr19:1373884:- NO_LDAS 0.0068 GT 1.8256 AG 1.4256 ["INTERCHROMOSOMAL[chr7--chr19]"] IDH3G--VEZF1 2 0 1.00 0.00 INCL_NON_REF_SPLICE IDH3G^ENSG00000067829.19 chrX:153787051:- VEZF1^ENSG00000136451.9 chr17:57983126:- NO_LDAS 0.0034 GT 1.7056 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr17]"] IDH3G--F2RL2 2 0 1.00 0.00 INCL_NON_REF_SPLICE IDH3G^ENSG00000067829.19 chrX:153787051:- F2RL2^ENSG00000164220.7 chr5:76618387:- NO_LDAS 0.0034 GT 1.7056 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr5]"] HMGN3--LINC00899 2 0 2.00 0.00 INCL_NON_REF_SPLICE HMGN3^ENSG00000118418.14 chr6:79202317:- LINC00899^ENSG00000231711.2 chr22:46044725:- NO_LDAS 0.0068 GT 1.5628 AG 1.2729 ["INTERCHROMOSOMAL[chr6--chr22]"] HLA-J--OR6C66P 2 0 2.00 0.00 INCL_NON_REF_SPLICE HLA-J^ENSG00000204622.11 chr6:30009177:+ OR6C66P^ENSG00000233606.2 chr12:55392376:+ NO_LDAS 0.0068 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr12]"] HLA-J--HLA-W 2 0 2.00 0.00 ONLY_REF_SPLICE HLA-J^ENSG00000204622.11 chr6:30007593:+ HLA-W^ENSG00000235290.1 chr6:29957439:+ YES_LDAS 0.0068 GT 1.5628 AG 1.5628 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.05Mb]","LOCAL_REARRANGEMENT:+:[47401]"] GTF2IRD2--LRRC42 2 0 0.67 0.00 ONLY_REF_SPLICE GTF2IRD2^ENSG00000196275.14 chr7:74819554:- LRRC42^ENSG00000116212.15 chr1:53960356:+ NO_LDAS 0.0023 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr1]"] GTF2IP1--RAPGEF4 2 0 2.00 0.00 ONLY_REF_SPLICE GTF2IP1^ENSG00000277053.4 chr7:75187220:- RAPGEF4^ENSG00000091428.18 chr2:172917802:+ YES_LDAS 0.0068 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr2]"] GOLGA2P8--ZNF774 2 0 2.00 0.00 INCL_NON_REF_SPLICE GOLGA2P8^ENSG00000214433.4 chr15:90295226:+ ZNF774^ENSG00000196391.11 chr15:90354642:+ YES_LDAS 0.0068 GT 1.5329 AG 1.9899 ["INTRACHROMOSOMAL[chr15:0.06Mb]","NEIGHBORS[56601]"] GNAI3--AC126323.1 2 0 1.00 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246572:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] GNAI3--AC126323.1 2 0 1.00 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246254:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] FZD4--AP001528.1 2 0 2.00 0.00 ONLY_REF_SPLICE FZD4^ENSG00000174804.4 chr11:86954801:- AP001528.1^ENSG00000255471.1 chr11:86922098:- YES_LDAS 0.0068 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[20642]"] FRMD1--SERPINF1 2 0 2.00 0.00 ONLY_REF_SPLICE FRMD1^ENSG00000153303.17 chr6:168066239:- SERPINF1^ENSG00000132386.11 chr17:1771872:+ NO_LDAS 0.0068 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr17]"] FOXO1--LINC00598 2 0 2.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40470162:- YES_LDAS 0.0068 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 2 0 2.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40466677:- YES_LDAS 0.0068 GT 1.7232 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 2 0 2.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40350302:- YES_LDAS 0.0068 GT 1.7232 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FLOT1--CADM2 2 0 2.00 0.00 INCL_NON_REF_SPLICE FLOT1^ENSG00000137312.15 chr6:30730428:- CADM2^ENSG00000175161.14 chr3:84959377:+ NO_LDAS 0.0068 GT 1.8256 AG 0.9710 ["INTERCHROMOSOMAL[chr6--chr3]"] FGGY--C11orf80 2 0 2.00 0.00 INCL_NON_REF_SPLICE FGGY^ENSG00000172456.18 chr1:59346398:+ C11orf80^ENSG00000173715.18 chr11:66815758:+ NO_LDAS 0.0068 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr11]"] FBXL5--AC107223.1 2 0 2.00 0.00 ONLY_REF_SPLICE FBXL5^ENSG00000118564.15 chr4:15612266:- AC107223.1^ENSG00000251600.8 chr4:143573371:+ NO_LDAS 0.0068 GT 1.9219 AG 1.8295 ["INTRACHROMOSOMAL[chr4:127.88Mb]"] ELMO1--AOAH 2 0 2.00 0.00 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36861659:- AOAH^ENSG00000136250.12 chr7:36686794:- YES_LDAS 0.0068 GT 1.9329 AG 1.2310 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.13Mb]"] EFNA5--RAI14 2 0 2.00 0.00 ONLY_REF_SPLICE EFNA5^ENSG00000184349.14 chr5:107670489:- RAI14^ENSG00000039560.14 chr5:34795939:+ YES_LDAS 0.0068 GT 1.5058 AG 1.6895 ["INTRACHROMOSOMAL[chr5:72.54Mb]"] E2F4--AFAP1L2 2 0 2.00 0.00 INCL_NON_REF_SPLICE E2F4^ENSG00000205250.9 chr16:67195814:+ AFAP1L2^ENSG00000169129.15 chr10:114297234:- NO_LDAS 0.0068 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr10]"] DUSP1--GNAO1 2 0 2.00 0.00 INCL_NON_REF_SPLICE DUSP1^ENSG00000120129.6 chr5:172770704:- GNAO1^ENSG00000087258.16 chr16:56347281:+ NO_LDAS 0.0068 GT 1.7968 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr16]"] CPNE8--TMEM117 2 0 2.00 0.00 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38730283:- TMEM117^ENSG00000139173.10 chr12:44143525:+ YES_LDAS 0.0068 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr12:4.93Mb]"] COX10--GATA2 2 0 2.00 0.00 INCL_NON_REF_SPLICE COX10^ENSG00000006695.12 chr17:14192099:+ GATA2^ENSG00000179348.12 chr3:128485880:- NO_LDAS 0.0068 GT 1.5058 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr3]"] CHST9--AQP4 2 0 2.00 0.00 ONLY_REF_SPLICE CHST9^ENSG00000154080.14 chr18:27024116:- AQP4^ENSG00000171885.18 chr18:26862596:- YES_LDAS 0.0068 GT 1.9086 AG 1.8892 ["ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr18:0.04Mb]","NEIGHBORS[40710]"] CHKB--MRPL9 2 0 2.00 0.00 ONLY_REF_SPLICE CHKB^ENSG00000100288.20 chr22:50582249:- MRPL9^ENSG00000143436.11 chr1:151761552:- YES_LDAS 0.0068 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr22--chr1]"] CCDC198--NPIPB10P 2 0 0.17 0.00 ONLY_REF_SPLICE CCDC198^ENSG00000100557.10 chr14:57475582:- NPIPB10P^ENSG00000196796.5 chr16:29050502:+ YES_LDAS 0.0006 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr16]"] CATSPERB--TC2N 2 0 2.00 0.00 ONLY_REF_SPLICE CATSPERB^ENSG00000133962.8 chr14:91719418:- TC2N^ENSG00000165929.13 chr14:91802421:- YES_LDAS 0.0068 GT 1.6895 AG 1.9899 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[961]"] BTLA--KLHL22 2 0 2.00 0.00 INCL_NON_REF_SPLICE BTLA^ENSG00000186265.10 chr3:112464796:- KLHL22^ENSG00000099910.17 chr22:20442329:- YES_LDAS 0.0068 GT 1.2867 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr22]"] AP006294.2--ENPP7P3 2 0 2.00 0.00 INCL_NON_REF_SPLICE AP006294.2^ENSG00000284639.1 chr11:3580927:- ENPP7P3^ENSG00000248618.1 chr3:130167943:- YES_LDAS 0.0068 GT 1.4566 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr3]"] AL445250.1--AC110079.1 2 0 2.00 0.00 ONLY_REF_SPLICE AL445250.1^ENSG00000225096.3 chr6:57961742:+ AC110079.1^ENSG00000260404.3 chr4:118595912:+ NO_LDAS 0.0068 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr4]"] ACYP1--MLH3 2 0 2.00 0.00 ONLY_REF_SPLICE ACYP1^ENSG00000119640.9 chr14:75069210:- MLH3^ENSG00000119684.16 chr14:75049718:- YES_LDAS 0.0068 GT 1.5628 AG 1.8892 ["INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[1705]"] ACTR3C--AC092681.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE ACTR3C^ENSG00000106526.10 chr7:150284753:- AC092681.1^ENSG00000224016.2 chr7:149909705:- YES_LDAS 0.0068 GT 1.9899 AG 1.9899 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.33Mb]"] AC242842.2--SEC22B2P 2 0 2.00 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ SEC22B2P^ENSG00000274423.1 chr1:149351251:+ YES_LDAS 0.0068 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.25Mb]"] AC138409.2--NAIP 2 0 0.10 0.00 ONLY_REF_SPLICE AC138409.2^ENSG00000215158.9 chr5:34175822:- NAIP^ENSG00000249437.8 chr5:71003857:- YES_LDAS 0.0003 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr5:36.72Mb]"] AC093849.4--ACP1 2 0 1.00 0.00 INCL_NON_REF_SPLICE AC093849.4^ENSG00000288025.1 chr4:173399503:+ ACP1^ENSG00000143727.16 chr2:271866:+ YES_LDAS 0.0034 GT 1.2310 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr2]"] AC092807.3--DDAH1 2 0 2.00 0.00 ONLY_REF_SPLICE AC092807.3^ENSG00000282057.1 chr1:85577984:- DDAH1^ENSG00000153904.21 chr1:85358847:- YES_LDAS 0.0068 GT 1.8062 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr1:0.02Mb]","NEIGHBORS[17122]"] AC087190.3--ALDH2 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC087190.3^ENSG00000263244.2 chr16:9105615:+ ALDH2^ENSG00000111275.13 chr12:111809543:+ NO_LDAS 0.0068 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr12]"] AC073529.1--MID1 2 0 2.00 0.00 ONLY_REF_SPLICE AC073529.1^ENSG00000234129.8 chrX:11055936:- MID1^ENSG00000101871.16 chrX:10567603:- YES_LDAS 0.0068 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","NEIGHBORS[13924]"] AC067930.3--APOBR 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC067930.3^ENSG00000254859.1 chr8:143542299:- APOBR^ENSG00000184730.11 chr16:28496396:+ NO_LDAS 0.0068 GT 1.7819 AG 1.3710 ["INTERCHROMOSOMAL[chr8--chr16]"] AC044810.2--OVCH2 2 0 2.00 0.00 ONLY_REF_SPLICE AC044810.2^ENSG00000254951.7 chr11:7905603:- OVCH2^ENSG00000183378.12 chr11:7704674:- YES_LDAS 0.0068 GT 1.8892 AG 1.8256 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.05Mb]","NEIGHBORS[47972]"] AC023790.2--FAM234B 2 0 2.00 0.00 ONLY_REF_SPLICE AC023790.2^ENSG00000255621.1 chr12:13022161:+ FAM234B^ENSG00000084444.14 chr12:13055551:+ YES_LDAS 0.0068 GT 1.4295 AG 1.5219 ["INTRACHROMOSOMAL[chr12:0.00Mb]","NEIGHBORS[3702]"] AC016629.1--RPL23AP82 2 0 2.00 0.00 ONLY_REF_SPLICE AC016629.1^ENSG00000269032.1 chr19:58586356:+ RPL23AP82^ENSG00000184319.16 chr22:50788750:+ YES_LDAS 0.0068 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr22]"] AC013268.1--MALL 2 0 0.67 0.00 ONLY_REF_SPLICE AC013268.1^ENSG00000186148.13 chr2:109947845:+ MALL^ENSG00000144063.4 chr2:110091770:- YES_LDAS 0.0023 GT 1.8062 AG 1.6402 ["INTRACHROMOSOMAL[chr2:0.11Mb]"] AC010329.2--ZNF266 2 0 0.10 0.00 INCL_NON_REF_SPLICE AC010329.2^ENSG00000269779.1 chr19:20691918:+ ZNF266^ENSG00000174652.19 chr19:9413502:- NO_LDAS 0.0003 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr19:11.26Mb]"] AC008740.1--CRYM-AS1 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21338921:+ YES_LDAS 0.0068 GT 1.7232 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] AC006581.2--MFAP5 2 0 2.00 0.00 ONLY_REF_SPLICE AC006581.2^ENSG00000282022.1 chr12:8914956:- MFAP5^ENSG00000197614.11 chr12:8655830:- NO_LDAS 0.0068 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.20Mb]"] AC004980.3--AC004980.4 2 0 1.00 0.00 INCL_NON_REF_SPLICE AC004980.3^ENSG00000230305.2 chr7:76527852:+ AC004980.4^ENSG00000250778.1 chr7:76521938:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:+:[2441]"] ZZZ3--RABGAP1L 1 0 1.00 0.00 ONLY_REF_SPLICE ZZZ3^ENSG00000036549.13 chr1:77683262:- RABGAP1L^ENSG00000152061.23 chr1:174275833:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8323 ["INTRACHROMOSOMAL[chr1:96.48Mb]"] ZZZ3--ACADM 1 0 1.00 0.00 ONLY_REF_SPLICE ZZZ3^ENSG00000036549.13 chr1:77683262:- ACADM^ENSG00000117054.15 chr1:75739980:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.77Mb]"] ZYG11B--ACER3 1 0 1.00 0.00 ONLY_REF_SPLICE ZYG11B^ENSG00000162378.13 chr1:52726683:+ ACER3^ENSG00000078124.13 chr11:77016675:+ YES_LDAS 0.0034 GT 1.7056 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr11]"] ZNRF2P1--C1GALT1 1 0 0.50 0.00 ONLY_REF_SPLICE ZNRF2P1^ENSG00000237004.4 chr7:32729009:+ C1GALT1^ENSG00000106392.11 chr7:7234303:+ NO_LDAS 0.0017 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:25.48Mb]"] ZNRF2--UMPS 1 0 1.00 0.00 ONLY_REF_SPLICE ZNRF2^ENSG00000180233.11 chr7:30323737:+ UMPS^ENSG00000114491.14 chr3:124735093:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr3]"] ZNRF2--STK31 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNRF2^ENSG00000180233.11 chr7:30285826:+ STK31^ENSG00000196335.13 chr7:23752721:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr7:6.45Mb]"] ZNHIT1--ZNF827 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNHIT1^ENSG00000106400.12 chr7:101222774:+ ZNF827^ENSG00000151612.18 chr4:145938609:- NO_LDAS 0.0034 GT 1.9329 AG 0.8366 ["INTERCHROMOSOMAL[chr7--chr4]"] ZNF846--SEMA6C 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF846^ENSG00000196605.7 chr19:9763403:- SEMA6C^ENSG00000143434.16 chr1:151138775:- NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF84--AC008467.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF84^ENSG00000198040.11 chr12:133058295:+ AC008467.1^ENSG00000249476.2 chr5:109321560:- NO_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr5]"] ZNF790--ZNF613 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF790^ENSG00000197863.9 chr19:36837672:- ZNF613^ENSG00000176024.18 chr19:51936028:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:15.08Mb]"] ZNF772--ZNF543 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF772^ENSG00000197128.12 chr19:57475660:- ZNF543^ENSG00000178229.8 chr19:57323682:+ NO_LDAS 0.0034 GT 1.8062 AG 1.7465 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.14Mb]"] ZNF77--BOD1L1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF77^ENSG00000175691.9 chr19:2936524:- BOD1L1^ENSG00000038219.13 chr4:13587771:- YES_LDAS 0.0034 GT 1.9086 AG 1.4295 ["INTERCHROMOSOMAL[chr19--chr4]"] ZNF738--MTF2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF738^ENSG00000172687.13 chr19:21375964:+ MTF2^ENSG00000143033.18 chr1:93110230:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF736--ADARB1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF736^ENSG00000234444.10 chr7:64314153:+ ADARB1^ENSG00000197381.16 chr21:45204555:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr21]"] ZNF736--AC018647.3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF736^ENSG00000234444.10 chr7:64314153:+ AC018647.3^ENSG00000287032.1 chr7:35615602:- YES_LDAS 0.0034 GT 1.6402 AG 1.6049 ["INTRACHROMOSOMAL[chr7:28.68Mb]"] ZNF730--PAN3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF730^ENSG00000183850.14 chr19:23136043:+ PAN3^ENSG00000152520.14 chr13:28256292:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr13]"] ZNF709--AL034397.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF709^ENSG00000242852.7 chr19:12463925:- AL034397.1^ENSG00000237311.3 chrX:65989784:+ NO_LDAS 0.0017 GT 0.6998 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chrX]"] ZNF670--ZNF695 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF670^ENSG00000277462.2 chr1:247078594:- ZNF695^ENSG00000197472.15 chr1:247000074:- YES_LDAS 0.0034 GT 1.6895 AG 1.9656 ["ConjoinG","HGNC_GENEFAM","INTRACHROMOSOMAL[chr1:0.03Mb]","NEIGHBORS[26544]"] ZNF664--AC026358.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF664^ENSG00000179195.16 chr12:123988138:+ AC026358.1^ENSG00000256596.1 chr12:124208049:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.19Mb]"] ZNF655--MTERF3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF655^ENSG00000197343.11 chr7:99560695:+ MTERF3^ENSG00000156469.9 chr8:96257114:- YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr8]"] ZNF654--TASP1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF654^ENSG00000175105.8 chr3:88059505:+ TASP1^ENSG00000089123.16 chr20:13534141:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr20]"] ZNF629--ZNF324 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF629^ENSG00000102870.6 chr16:30783363:- ZNF324^ENSG00000083812.12 chr19:58471657:+ NO_LDAS 0.0017 GT 1.8892 AG 1.8062 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr16--chr19]"] ZNF626--ZDHHC9 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF626^ENSG00000188171.16 chr19:20661496:- ZDHHC9^ENSG00000188706.13 chrX:129811001:- NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chrX]"] ZNF620--FDX1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF620^ENSG00000177842.12 chr3:40512515:+ FDX1^ENSG00000137714.3 chr11:110456918:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr11]"] ZNF619--ZSCAN5DP 1 0 0.20 0.00 INCL_NON_REF_SPLICE ZNF619^ENSG00000177873.14 chr3:40487367:+ ZSCAN5DP^ENSG00000267908.2 chr19:56247219:+ NO_LDAS 0.0007 GC 1.8892 AG 1.9086 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr19]"] ZNF619--ZNF501 1 0 0.20 0.00 INCL_NON_REF_SPLICE ZNF619^ENSG00000177873.14 chr3:40487367:+ ZNF501^ENSG00000186446.12 chr3:44734983:+ NO_LDAS 0.0007 GC 1.8892 AG 1.8323 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr3:4.24Mb]"] ZNF619--ZNF432 1 0 0.20 0.00 INCL_NON_REF_SPLICE ZNF619^ENSG00000177873.14 chr3:40487367:+ ZNF432^ENSG00000256087.7 chr19:52034316:- NO_LDAS 0.0007 GC 1.8892 AG 1.8323 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr19]"] ZNF599--ADPRHL1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF599^ENSG00000153896.19 chr19:34767316:- ADPRHL1^ENSG00000153531.13 chr13:113433867:- NO_LDAS 0.0034 GT 1.8256 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr13]"] ZNF595--ELK4 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF595^ENSG00000272602.6 chr4:60153:+ ELK4^ENSG00000158711.14 chr1:205620838:- YES_LDAS 0.0034 GT 1.3996 AG 1.2419 ["INTERCHROMOSOMAL[chr4--chr1]"] ZNF586--SUMO2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF586^ENSG00000083828.16 chr19:57820549:+ SUMO2^ENSG00000188612.12 chr17:75166472:- NO_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF585B--TMCO1 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF585B^ENSG00000245680.11 chr19:37207040:- TMCO1^ENSG00000143183.18 chr1:165800035:- NO_LDAS 0.0017 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF585B--GFM1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF585B^ENSG00000245680.11 chr19:37207040:- GFM1^ENSG00000168827.15 chr3:158692717:+ NO_LDAS 0.0017 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr3]"] ZNF556--ZNF233 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF556^ENSG00000172000.7 chr19:2877682:+ ZNF233^ENSG00000159915.12 chr19:44274242:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7968 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:41.38Mb]"] ZNF546--ZNF354B 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF546^ENSG00000187187.14 chr19:40007400:+ ZNF354B^ENSG00000178338.11 chr5:178866976:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr5]"] ZNF526--RN7SL151P 1 0 0.20 0.00 INCL_NON_REF_SPLICE ZNF526^ENSG00000167625.11 chr19:42225571:+ RN7SL151P^ENSG00000244230.3 chr9:21699345:+ NO_LDAS 0.0007 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr9]"] ZNF521--SLC25A13 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF521^ENSG00000198795.11 chr18:25195160:- SLC25A13^ENSG00000004864.14 chr7:96234917:- YES_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr18--chr7]"] ZNF519--SRSF1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF519^ENSG00000175322.12 chr18:14124350:- SRSF1^ENSG00000136450.13 chr17:58005041:- YES_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr18--chr17]"] ZNF512--RAB27A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF512^ENSG00000243943.10 chr2:27583142:+ RAB27A^ENSG00000069974.16 chr15:55290396:- YES_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chr15]"] ZNF511--RTN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF511^ENSG00000198546.15 chr10:133310288:+ RTN1^ENSG00000139970.17 chr14:59630592:- NO_LDAS 0.0034 GT 1.1589 AG 1.4566 ["INTERCHROMOSOMAL[chr10--chr14]"] ZNF506--ZSWIM4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF506^ENSG00000081665.14 chr19:19792461:- ZSWIM4^ENSG00000132003.9 chr19:13804619:+ YES_LDAS 0.0034 GC 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr19:5.95Mb]"] ZNF506--ULK4 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF506^ENSG00000081665.14 chr19:19806031:- ULK4^ENSG00000168038.11 chr3:41754488:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr3]"] ZNF506--HCLS1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF506^ENSG00000081665.14 chr19:19821601:- HCLS1^ENSG00000180353.11 chr3:121647448:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr3]"] ZNF506--CXADR 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF506^ENSG00000081665.14 chr19:19821601:- CXADR^ENSG00000154639.19 chr21:17547027:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr21]"] ZNF496--AL356952.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF496^ENSG00000162714.12 chr1:247308475:- AL356952.1^ENSG00000288052.1 chr10:61496124:+ YES_LDAS 0.0034 GT 1.5628 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr10]"] ZNF493--ACAP2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF493^ENSG00000196268.12 chr19:21405856:+ ACAP2^ENSG00000114331.15 chr3:195345317:- YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr3]"] ZNF48--NLRC4 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZNF48^ENSG00000180035.13 chr16:30399019:+ NLRC4^ENSG00000091106.19 chr2:32251338:- NO_LDAS 0.0017 GC 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr2]"] ZNF460--SLC25A11 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF460^ENSG00000197714.9 chr19:57291584:+ SLC25A11^ENSG00000108528.14 chr17:4938835:- YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF446--AL162586.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF446^ENSG00000083838.16 chr19:58477869:+ AL162586.1^ENSG00000225032.5 chr9:127818207:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr9]"] ZNF442--ERICH1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF442^ENSG00000198342.10 chr19:12365533:- ERICH1^ENSG00000104714.14 chr8:674047:- YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr8]"] ZNF438--FRMD4A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF438^ENSG00000183621.15 chr10:30999338:- FRMD4A^ENSG00000151474.23 chr10:13810908:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr10:16.36Mb]"] ZNF425--AC127502.1 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF425^ENSG00000204947.9 chr7:149126196:- AC127502.1^ENSG00000215302.8 chr15:30474356:+ NO_LDAS 0.0017 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr15]"] ZNF419--FAM91A1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF419^ENSG00000105136.21 chr19:57492211:+ FAM91A1^ENSG00000176853.16 chr8:123786495:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr8]"] ZNF37BP--ZFP1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF37BP^ENSG00000234420.7 chr10:42525540:- ZFP1^ENSG00000184517.12 chr16:75166770:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr16]"] ZNF365--PPP1R12A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF365^ENSG00000138311.18 chr10:62459797:+ PPP1R12A^ENSG00000058272.19 chr12:79788783:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr12]"] ZNF33A--NOTCH2NLA 1 0 0.17 0.00 INCL_NON_REF_SPLICE ZNF33A^ENSG00000189180.16 chr10:38054537:+ NOTCH2NLA^ENSG00000264343.6 chr1:146156223:- NO_LDAS 0.0006 GT 1.8062 AG 1.5628 ["INTERCHROMOSOMAL[chr10--chr1]"] ZNF33A--ERCC6 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF33A^ENSG00000189180.16 chr10:38017015:+ ERCC6^ENSG00000225830.16 chr10:49524777:- YES_LDAS 0.0017 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr10:11.39Mb]"] ZNF337--C11orf54 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF337^ENSG00000130684.14 chr20:25685567:- C11orf54^ENSG00000182919.15 chr11:93759742:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr11]"] ZNF281--AL035078.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF281^ENSG00000162702.8 chr1:200409108:- AL035078.1^ENSG00000254584.2 chr11:32041270:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr11]"] ZNF277--COG5 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF277^ENSG00000198839.10 chr7:112287074:+ COG5^ENSG00000164597.15 chr7:107527357:- YES_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr7:4.64Mb]"] ZNF264--ZNF585B 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF264^ENSG00000083844.10 chr19:57191946:+ ZNF585B^ENSG00000245680.11 chr19:37207254:- YES_LDAS 0.0034 GT 1.5219 AG 1.5058 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:19.97Mb]"] ZNF260--ZNF529 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF260^ENSG00000254004.7 chr19:36528219:- ZNF529^ENSG00000186020.13 chr19:36548322:- YES_LDAS 0.0034 GT 1.5656 AG 1.9329 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:-:[6503]"] ZNF254--ZNF720 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF254^ENSG00000213096.11 chr19:24106066:+ ZNF720^ENSG00000197302.10 chr16:31723258:+ NO_LDAS 0.0034 GT 1.8062 AG 1.7819 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr16]"] ZNF251--DOP1A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF251^ENSG00000198169.9 chr8:144753683:- DOP1A^ENSG00000083097.14 chr6:83108910:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7232 ["INTERCHROMOSOMAL[chr8--chr6]"] ZNF235--ZNF577 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF235^ENSG00000159917.17 chr19:44298820:- ZNF577^ENSG00000161551.14 chr19:51880877:- YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:7.50Mb]"] ZNF195--ARSG 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF195^ENSG00000005801.18 chr11:3370975:- ARSG^ENSG00000141337.13 chr17:68306943:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr17]"] ZNF143--NARS2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF143^ENSG00000166478.10 chr11:9461076:+ NARS2^ENSG00000137513.10 chr11:78443758:- YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTRACHROMOSOMAL[chr11:68.91Mb]"] ZNF142--VPS4B 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF142^ENSG00000115568.16 chr2:218644538:- VPS4B^ENSG00000119541.10 chr18:63422418:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr18]"] ZNF138--AC008267.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF138^ENSG00000197008.10 chr7:64794571:+ AC008267.5^ENSG00000244510.2 chr7:66490107:- YES_LDAS 0.0034 GT 1.8323 AG 1.6729 ["INTRACHROMOSOMAL[chr7:1.65Mb]"] ZNF12--PIWIL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF12^ENSG00000164631.19 chr7:6692633:- PIWIL2^ENSG00000197181.12 chr8:22311247:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr8]"] ZNF107--SLC25A13 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF107^ENSG00000196247.11 chr7:64666285:+ SLC25A13^ENSG00000004864.14 chr7:96171524:- YES_LDAS 0.0034 GT 1.7968 AG 1.9329 ["INTRACHROMOSOMAL[chr7:31.41Mb]"] ZNF107--FBXL13 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF107^ENSG00000196247.11 chr7:64666285:+ FBXL13^ENSG00000161040.16 chr7:102926374:- NO_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr7:38.10Mb]"] ZMYM6--PIGB 1 0 1.00 0.00 ONLY_REF_SPLICE ZMYM6^ENSG00000163867.17 chr1:35030547:- PIGB^ENSG00000069943.10 chr15:55327531:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] ZGLP1--VN1R54P 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZGLP1^ENSG00000220201.7 chr19:10305390:- VN1R54P^ENSG00000232109.1 chr10:42660794:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chr10]"] ZFYVE19--AP002982.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZFYVE19^ENSG00000166140.17 chr15:40810757:+ AP002982.2^ENSG00000287654.1 chr8:97643744:- YES_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr8]"] ZFPL1--RPAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZFPL1^ENSG00000162300.13 chr11:65086792:+ RPAP1^ENSG00000103932.12 chr15:41524123:- NO_LDAS 0.0034 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr15]"] ZFAND6--RTF2 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND6^ENSG00000086666.19 chr15:80059809:+ RTF2^ENSG00000022277.13 chr20:56484111:+ NO_LDAS 0.0034 GT 1.5058 AG 1.5058 ["INTERCHROMOSOMAL[chr15--chr20]"] ZFAND5--PRPF3 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND5^ENSG00000107372.13 chr9:72364696:- PRPF3^ENSG00000117360.13 chr1:150346408:+ YES_LDAS 0.0034 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr9--chr1]"] ZFAND1--MSL3 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND1^ENSG00000104231.11 chr8:81718182:- MSL3^ENSG00000005302.19 chrX:11760403:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chrX]"] ZEB2-AS1--VPS41 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZEB2-AS1^ENSG00000238057.10 chr2:144520021:+ VPS41^ENSG00000006715.16 chr7:38754743:- YES_LDAS 0.0034 GT 1.2729 AG 1.5656 ["INTERCHROMOSOMAL[chr2--chr7]"] ZEB1--AL359546.1 1 0 1.00 0.00 ONLY_REF_SPLICE ZEB1^ENSG00000148516.22 chr10:31461237:+ AL359546.1^ENSG00000287564.1 chr10:31105939:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.17Mb]"] ZDHHC20--MICU2 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC20^ENSG00000180776.16 chr13:21459054:- MICU2^ENSG00000165487.14 chr13:21539688:- NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.03Mb]","LOCAL_REARRANGEMENT:-:[33321]"] ZDHHC20--MAP2K1 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC20^ENSG00000180776.16 chr13:21459054:- MAP2K1^ENSG00000169032.10 chr15:66481755:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr15]"] ZDHHC14--AC011330.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157381378:+ AC011330.1^ENSG00000249839.1 chr15:43676094:- NO_LDAS 0.0017 GC 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr15]"] ZDHHC1--GOLGA8CP 1 0 0.20 0.00 INCL_NON_REF_SPLICE ZDHHC1^ENSG00000159714.12 chr16:67406393:- GOLGA8CP^ENSG00000181984.11 chr15:20574016:+ NO_LDAS 0.0007 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr15]"] ZDHHC1--ABCC6P1 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC1^ENSG00000159714.12 chr16:67416171:- ABCC6P1^ENSG00000256340.8 chr16:18596767:+ YES_LDAS 0.0034 GT 1.5628 AG 1.9086 ["INTRACHROMOSOMAL[chr16:48.80Mb]"] ZCCHC24--C1QL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZCCHC24^ENSG00000165424.7 chr10:79432558:- C1QL3^ENSG00000165985.10 chr10:16520885:- NO_LDAS 0.0034 GT 1.8062 AG 1.5656 ["INTRACHROMOSOMAL[chr10:62.86Mb]"] ZC3H8--LRRFIP2 1 0 1.00 0.00 ONLY_REF_SPLICE ZC3H8^ENSG00000144161.13 chr2:112250191:- LRRFIP2^ENSG00000093167.18 chr3:37083806:- YES_LDAS 0.0034 GT 1.3383 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr3]"] ZC3H15--RANBP6 1 0 0.33 0.00 INCL_NON_REF_SPLICE ZC3H15^ENSG00000065548.18 chr2:186505841:+ RANBP6^ENSG00000137040.10 chr9:6014890:- NO_LDAS 0.0011 GT 1.7465 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr9]"] ZC3H11A--XIAP 1 0 1.00 0.00 ONLY_REF_SPLICE ZC3H11A^ENSG00000058673.17 chr1:203795794:+ XIAP^ENSG00000101966.13 chrX:123900493:+ YES_LDAS 0.0034 GT 1.6729 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chrX]"] ZBTB46--OSBPL10 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB46^ENSG00000130584.12 chr20:63775678:- OSBPL10^ENSG00000144645.15 chr3:31879830:- YES_LDAS 0.0034 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr3]"] ZBTB42--FAM20A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB42^ENSG00000179627.10 chr14:104802174:+ FAM20A^ENSG00000108950.12 chr17:68601354:- YES_LDAS 0.0034 GC 1.3996 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr17]"] ZBTB39--PTGS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB39^ENSG00000166860.3 chr12:57002016:- PTGS2^ENSG00000073756.13 chr1:186679336:- NO_LDAS 0.0034 GT 1.8256 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr1]"] ZBTB17--SCN2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB17^ENSG00000116809.12 chr1:15942529:- SCN2A^ENSG00000136531.18 chr2:165315512:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5329 ["INTERCHROMOSOMAL[chr1--chr2]"] ZBTB11--AATBC 1 0 0.25 0.00 INCL_NON_REF_SPLICE ZBTB11^ENSG00000066422.5 chr3:101652807:- AATBC^ENSG00000215458.8 chr21:43810962:- NO_LDAS 0.0008 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr21]"] ZBED6CL--BEX3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBED6CL^ENSG00000188707.6 chr7:150329196:+ BEX3^ENSG00000166681.14 chrX:103377475:+ NO_LDAS 0.0034 GT 1.2419 AG 1.1033 ["INTERCHROMOSOMAL[chr7--chrX]"] ZBED1P1--CRYZ 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBED1P1^ENSG00000250304.2 chr4:110292213:+ CRYZ^ENSG00000116791.14 chr1:74710247:- NO_LDAS 0.0034 GT 1.4716 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr1]"] Z95115.1--CASP3 1 0 1.00 0.00 ONLY_REF_SPLICE Z95115.1^ENSG00000261188.1 chr22:26513034:+ CASP3^ENSG00000164305.19 chr4:184638468:- YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr22--chr4]"] YTHDC1--USP10 1 0 1.00 0.00 INCL_NON_REF_SPLICE YTHDC1^ENSG00000083896.13 chr4:68337238:- USP10^ENSG00000103194.16 chr16:84772541:+ YES_LDAS 0.0034 GT 1.2729 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr16]"] YIPF5--ERBIN 1 0 1.00 0.00 ONLY_REF_SPLICE YIPF5^ENSG00000145817.17 chr5:144169846:- ERBIN^ENSG00000112851.15 chr5:66012049:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr5:78.08Mb]"] YIPF4--SLC30A6 1 0 1.00 0.00 ONLY_REF_SPLICE YIPF4^ENSG00000119820.11 chr2:32278234:+ SLC30A6^ENSG00000152683.14 chr2:32204590:+ YES_LDAS 0.0034 GT 1.5656 AG 1.7232 ["INTRACHROMOSOMAL[chr2:0.05Mb]","LOCAL_REARRANGEMENT:+:[53525]"] YARS1--FRMD5 1 0 1.00 0.00 INCL_NON_REF_SPLICE YARS1^ENSG00000134684.12 chr1:32775873:- FRMD5^ENSG00000171877.21 chr15:43919809:- NO_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] XRRA1--GAS2L2 1 0 0.50 0.00 INCL_NON_REF_SPLICE XRRA1^ENSG00000166435.15 chr11:74843205:- GAS2L2^ENSG00000270765.6 chr17:35752766:- NO_LDAS 0.0017 GC 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr17]"] XPOT--TMEM64 1 0 1.00 0.00 INCL_NON_REF_SPLICE XPOT^ENSG00000184575.12 chr12:64404498:+ TMEM64^ENSG00000180694.14 chr8:90645747:- NO_LDAS 0.0034 GT 0.9183 AG 1.2729 ["INTERCHROMOSOMAL[chr12--chr8]"] XPNPEP3--SMO 1 0 1.00 0.00 ONLY_REF_SPLICE XPNPEP3^ENSG00000196236.13 chr22:40857245:+ SMO^ENSG00000128602.11 chr7:129203384:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr7]"] XPNPEP3--SLC7A11 1 0 1.00 0.00 ONLY_REF_SPLICE XPNPEP3^ENSG00000196236.13 chr22:40860793:+ SLC7A11^ENSG00000151012.13 chr4:138236451:- NO_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr4]"] XKR9--AC022858.1 1 0 1.00 0.00 ONLY_REF_SPLICE XKR9^ENSG00000221947.8 chr8:70707153:+ AC022858.1^ENSG00000254031.6 chr8:71199140:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9219 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr8:0.37Mb]"] XKR9--AC022858.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE XKR9^ENSG00000221947.8 chr8:70707147:+ AC022858.1^ENSG00000254031.6 chr8:71199140:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9219 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr8:0.37Mb]"] XIAP--FAM104A 1 0 1.00 0.00 ONLY_REF_SPLICE XIAP^ENSG00000101966.13 chrX:123860293:+ FAM104A^ENSG00000133193.12 chr17:73209768:- YES_LDAS 0.0034 GT 1.5058 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr17]"] XBP1P1--LILRB5 1 0 1.00 0.00 INCL_NON_REF_SPLICE XBP1P1^ENSG00000249947.2 chr5:112885435:+ LILRB5^ENSG00000105609.17 chr19:54250932:- NO_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr19]"] WWC2--NT5C2 1 0 1.00 0.00 ONLY_REF_SPLICE WWC2^ENSG00000151718.16 chr4:183099622:+ NT5C2^ENSG00000076685.19 chr10:103139479:- NO_LDAS 0.0034 GT 1.5058 AG 1.8323 ["INTERCHROMOSOMAL[chr4--chr10]"] WTIP--AL356481.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE WTIP^ENSG00000142279.13 chr19:34482641:+ AL356481.1^ENSG00000228395.2 chr9:128543680:- NO_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr9]"] WTAPP1--BICC1 1 0 1.00 0.00 ONLY_REF_SPLICE WTAPP1^ENSG00000255282.6 chr11:102793261:+ BICC1^ENSG00000122870.12 chr10:58702074:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr10]"] WSB2--GK5 1 0 1.00 0.00 INCL_NON_REF_SPLICE WSB2^ENSG00000176871.9 chr12:118035008:- GK5^ENSG00000175066.16 chr3:142164411:- YES_LDAS 0.0034 AT 1.7819 AC 1.7465 ["INTERCHROMOSOMAL[chr12--chr3]"] WNT9A--STK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE WNT9A^ENSG00000143816.8 chr1:227919853:- STK3^ENSG00000104375.17 chr8:98371354:- NO_LDAS 0.0034 GT 0.9968 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr8]"] WNT2B--CTTNBP2NL 1 0 1.00 0.00 ONLY_REF_SPLICE WNT2B^ENSG00000134245.18 chr1:112491081:+ CTTNBP2NL^ENSG00000143079.15 chr1:112462555:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[3085]"] WNT2B--CTTNBP2NL 1 0 1.00 0.00 ONLY_REF_SPLICE WNT2B^ENSG00000134245.18 chr1:112467591:+ CTTNBP2NL^ENSG00000143079.15 chr1:112448942:+ YES_LDAS 0.0034 GT 1.7232 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[3085]"] WDR86-AS1--LIMD2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR86-AS1^ENSG00000243836.5 chr7:151409382:+ LIMD2^ENSG00000136490.9 chr17:63699348:- YES_LDAS 0.0034 GT 1.3996 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr17]"] WDR73--DLGAP1-AS3 1 0 0.50 0.00 INCL_NON_REF_SPLICE WDR73^ENSG00000177082.13 chr15:84643664:- DLGAP1-AS3^ENSG00000263724.2 chr18:3896800:+ NO_LDAS 0.0017 AT 1.5656 AC 1.7465 ["INTERCHROMOSOMAL[chr15--chr18]"] WDR7--MAPRE2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR7^ENSG00000091157.14 chr18:56731597:+ MAPRE2^ENSG00000166974.13 chr18:35070195:+ NO_LDAS 0.0034 GT 1.9086 AG 1.6402 ["INTRACHROMOSOMAL[chr18:21.51Mb]"] WDR64--PPP1R2 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR64^ENSG00000162843.17 chr1:241683595:+ PPP1R2^ENSG00000184203.8 chr3:195529885:- NO_LDAS 0.0034 GT 1.2419 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr3]"] WDR59--RFWD3 1 0 1.00 0.00 ONLY_REF_SPLICE WDR59^ENSG00000103091.15 chr16:74984964:- RFWD3^ENSG00000168411.14 chr16:74632673:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr16:0.20Mb]"] WDR59--RFWD3 1 0 1.00 0.00 ONLY_REF_SPLICE WDR59^ENSG00000103091.15 chr16:74965773:- RFWD3^ENSG00000168411.14 chr16:74661451:- YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr16:0.20Mb]"] WDR11--AC123595.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE WDR11^ENSG00000120008.16 chr10:120851435:+ AC123595.2^ENSG00000286638.1 chr5:91280697:+ NO_LDAS 0.0017 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr5]"] WDFY2--NUS1 1 0 1.00 0.00 ONLY_REF_SPLICE WDFY2^ENSG00000139668.9 chr13:51727790:+ NUS1^ENSG00000153989.8 chr6:117693042:+ NO_LDAS 0.0034 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr13--chr6]"] WDFY1--PHF13 1 0 1.00 0.00 ONLY_REF_SPLICE WDFY1^ENSG00000085449.15 chr2:223945148:- PHF13^ENSG00000116273.6 chr1:6616757:+ YES_LDAS 0.0034 GT 1.5301 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] VWA3A--HAUS3 1 0 1.00 0.00 ONLY_REF_SPLICE VWA3A^ENSG00000175267.15 chr16:22133095:+ HAUS3^ENSG00000214367.9 chr4:2131290:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr4]"] VTI1A--FBXO25 1 0 1.00 0.00 ONLY_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112668998:+ FBXO25^ENSG00000147364.17 chr8:431341:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7056 ["INTERCHROMOSOMAL[chr10--chr8]"] VTI1A--DPY19L4 1 0 1.00 0.00 INCL_NON_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112447467:+ DPY19L4^ENSG00000156162.16 chr8:94768535:+ NO_LDAS 0.0034 GT 1.7232 AG 1.5301 ["INTERCHROMOSOMAL[chr10--chr8]"] VTI1A--AL158212.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112669009:+ AL158212.1^ENSG00000225292.2 chr10:112905977:+ NO_LDAS 0.0034 GT 1.5628 AG 1.9899 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.07Mb]","NEIGHBORS[69991]"] VTI1A--AL158212.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE VTI1A^ENSG00000151532.14 chr10:112669009:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ YES_LDAS 0.0034 GT 1.5628 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr10:0.07Mb]","NEIGHBORS[69991]"] VSTM5--GCKR 1 0 1.00 0.00 INCL_NON_REF_SPLICE VSTM5^ENSG00000214376.6 chr11:93820107:- GCKR^ENSG00000084734.9 chr2:27497564:+ NO_LDAS 0.0034 GT 1.6049 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr2]"] VSIG10L2--AC091564.6 1 0 0.50 0.00 INCL_NON_REF_SPLICE VSIG10L2^ENSG00000283703.2 chr11:125957232:+ AC091564.6^ENSG00000255680.1 chr11:6618772:+ NO_LDAS 0.0017 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr11:119.33Mb]"] VPS9D1--VPS37C 1 0 1.00 0.00 INCL_NON_REF_SPLICE VPS9D1^ENSG00000075399.14 chr16:89716590:- VPS37C^ENSG00000167987.11 chr11:61132264:- NO_LDAS 0.0034 GC 1.9219 AG 1.4256 ["INTERCHROMOSOMAL[chr16--chr11]"] VPS37A--NDUFB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE VPS37A^ENSG00000155975.10 chr8:17280438:+ NDUFB1^ENSG00000183648.11 chr14:92118392:- NO_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr14]"] VPS26C--PRPF18 1 0 1.00 0.00 ONLY_REF_SPLICE VPS26C^ENSG00000157538.14 chr21:37267238:- PRPF18^ENSG00000165630.14 chr10:13597458:+ NO_LDAS 0.0034 GT 1.9329 AG 1.0530 ["INTERCHROMOSOMAL[chr21--chr10]"] VPS26A--DDX21 1 0 1.00 0.00 ONLY_REF_SPLICE VPS26A^ENSG00000122958.15 chr10:69124280:+ DDX21^ENSG00000165732.13 chr10:68970201:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chr10:0.14Mb]"] VIRMA--GNPTAB 1 0 1.00 0.00 ONLY_REF_SPLICE VIRMA^ENSG00000164944.12 chr8:94511185:- GNPTAB^ENSG00000111670.16 chr12:101780621:- NO_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr12]"] VINAC1P--FBXO6 1 0 1.00 0.00 INCL_NON_REF_SPLICE VINAC1P^ENSG00000283698.1 chr2:112439376:- FBXO6^ENSG00000116663.11 chr1:11668656:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] VEZF1--UEVLD 1 0 1.00 0.00 ONLY_REF_SPLICE VEZF1^ENSG00000136451.9 chr17:57988079:- UEVLD^ENSG00000151116.17 chr11:18565010:- YES_LDAS 0.0034 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr11]"] VDAC1--PPP2CA 1 0 1.00 0.00 ONLY_REF_SPLICE VDAC1^ENSG00000213585.11 chr5:134004647:- PPP2CA^ENSG00000113575.10 chr5:134206131:- YES_LDAS 0.0034 GT 1.9219 AG 1.9219 ["INTRACHROMOSOMAL[chr5:0.19Mb]"] VAPB--RAB22A 1 0 1.00 0.00 ONLY_REF_SPLICE VAPB^ENSG00000124164.16 chr20:58418363:+ RAB22A^ENSG00000124209.4 chr20:58343718:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9219 ["INTRACHROMOSOMAL[chr20:0.02Mb]","LOCAL_REARRANGEMENT:+:[21722]"] UTY--PCNP 1 0 1.00 0.00 ONLY_REF_SPLICE UTY^ENSG00000183878.15 chrY:13470121:- PCNP^ENSG00000081154.12 chr3:101590215:+ YES_LDAS 0.0034 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chrY--chr3]"] UTP18--TBCB 1 0 1.00 0.00 ONLY_REF_SPLICE UTP18^ENSG00000011260.14 chr17:51260926:+ TBCB^ENSG00000105254.12 chr19:36120710:+ NO_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr19]"] USP48--MFN2 1 0 1.00 0.00 ONLY_REF_SPLICE USP48^ENSG00000090686.16 chr1:21782824:- MFN2^ENSG00000116688.18 chr1:11989165:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr1:9.66Mb]"] USP30--SMC4 1 0 1.00 0.00 ONLY_REF_SPLICE USP30^ENSG00000135093.13 chr12:109052761:+ SMC4^ENSG00000113810.16 chr3:160411920:+ YES_LDAS 0.0034 GT 1.5329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr3]"] USP25--CYTIP 1 0 1.00 0.00 ONLY_REF_SPLICE USP25^ENSG00000155313.15 chr21:15778027:+ CYTIP^ENSG00000115165.10 chr2:157418589:- YES_LDAS 0.0034 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr21--chr2]"] USP20--LOXHD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP20^ENSG00000136878.14 chr9:129868191:+ LOXHD1^ENSG00000167210.17 chr18:46489045:- NO_LDAS 0.0034 GT 1.7465 AG 1.7232 ["INTERCHROMOSOMAL[chr9--chr18]"] USP12--TBC1D20 1 0 1.00 0.00 ONLY_REF_SPLICE USP12^ENSG00000152484.14 chr13:27116516:- TBC1D20^ENSG00000125875.15 chr20:448074:- YES_LDAS 0.0034 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr20]"] USP12--SKIL 1 0 1.00 0.00 ONLY_REF_SPLICE USP12^ENSG00000152484.14 chr13:27171592:- SKIL^ENSG00000136603.14 chr3:170359699:+ NO_LDAS 0.0034 GT 1.9086 AG 1.3383 ["INTERCHROMOSOMAL[chr13--chr3]"] USHBP1--MAPKAP1 1 0 1.00 0.00 ONLY_REF_SPLICE USHBP1^ENSG00000130307.12 chr19:17258584:- MAPKAP1^ENSG00000119487.17 chr9:125559809:- NO_LDAS 0.0034 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr9]"] UQCRH--ROCR 1 0 0.50 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ ROCR^ENSG00000228639.8 chr17:72037357:- NO_LDAS 0.0017 GT 1.7968 AG 0.9968 ["INTERCHROMOSOMAL[chr1--chr17]"] UQCRH--FAM43A 1 0 1.00 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ FAM43A^ENSG00000185112.6 chr3:194687628:+ NO_LDAS 0.0034 GT 1.7968 AG 0.9968 ["INTERCHROMOSOMAL[chr1--chr3]"] UQCRH--AC140118.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE UQCRH^ENSG00000173660.12 chr1:46303820:+ AC140118.2^ENSG00000287792.1 chr12:131351669:- NO_LDAS 0.0017 GT 1.7968 AG 0.9968 ["INTERCHROMOSOMAL[chr1--chr12]"] UPRT--NUDT3 1 0 1.00 0.00 ONLY_REF_SPLICE UPRT^ENSG00000094841.14 chrX:75300965:+ NUDT3^ENSG00000272325.2 chr6:34341972:- YES_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr6]"] UPRT--AXDND1 1 0 0.50 0.00 ONLY_REF_SPLICE UPRT^ENSG00000094841.14 chrX:75285524:+ AXDND1^ENSG00000162779.22 chr1:179525334:+ NO_LDAS 0.0017 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chrX--chr1]"] UPK3BP1--ICA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE UPK3BP1^ENSG00000242435.1 chr7:77005775:+ ICA1^ENSG00000003147.19 chr7:8114044:- NO_LDAS 0.0034 GT 1.8295 AG 1.9899 ["INTRACHROMOSOMAL[chr7:68.74Mb]"] UPK3BL1--ZNF75A 1 0 0.50 0.00 INCL_NON_REF_SPLICE UPK3BL1^ENSG00000267368.1 chr7:102638714:- ZNF75A^ENSG00000162086.16 chr16:3307716:+ YES_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr16]"] UPF3A--FAM120B 1 0 1.00 0.00 ONLY_REF_SPLICE UPF3A^ENSG00000169062.15 chr13:114282127:+ FAM120B^ENSG00000112584.14 chr6:170395487:+ NO_LDAS 0.0034 GT 1.6895 AG 1.4716 ["INTERCHROMOSOMAL[chr13--chr6]"] UNC5C--PDLIM5 1 0 1.00 0.00 ONLY_REF_SPLICE UNC5C^ENSG00000182168.15 chr4:95548734:- PDLIM5^ENSG00000163110.15 chr4:94523724:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9086 ["INTRACHROMOSOMAL[chr4:0.49Mb]"] ULK4--AC021683.2 1 0 0.50 0.00 ONLY_REF_SPLICE ULK4^ENSG00000168038.11 chr3:41918457:- AC021683.2^ENSG00000267506.5 chr17:77547971:+ YES_LDAS 0.0017 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"] UHRF2--STK38 1 0 1.00 0.00 ONLY_REF_SPLICE UHRF2^ENSG00000147854.17 chr9:6493932:+ STK38^ENSG00000112079.9 chr6:36521817:- YES_LDAS 0.0034 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr6]"] UHRF1--TK1 1 0 1.00 0.00 ONLY_REF_SPLICE UHRF1^ENSG00000276043.5 chr19:4911038:+ TK1^ENSG00000167900.12 chr17:78175618:- YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr17]"] UGT2B7--MTA3 1 0 1.00 0.00 ONLY_REF_SPLICE UGT2B7^ENSG00000171234.14 chr4:69051602:+ MTA3^ENSG00000057935.14 chr2:42718988:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr2]"] UGT1A6--CEP112 1 0 1.00 0.00 ONLY_REF_SPLICE UGT1A6^ENSG00000167165.19 chr2:233693865:+ CEP112^ENSG00000154240.17 chr17:65961598:- YES_LDAS 0.0034 GT 1.9656 AG 1.2729 ["INTERCHROMOSOMAL[chr2--chr17]"] UGT1A5--AC004381.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE UGT1A5^ENSG00000240224.1 chr2:233713165:+ AC004381.3^ENSG00000283399.1 chr16:20727386:+ NO_LDAS 0.0034 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr16]"] UGT1A10--ASTE1 1 0 1.00 0.00 ONLY_REF_SPLICE UGT1A10^ENSG00000242515.5 chr2:233637377:+ ASTE1^ENSG00000034533.12 chr3:131018716:- YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr3]"] UGGT2--LINC02821 1 0 0.33 0.00 ONLY_REF_SPLICE UGGT2^ENSG00000102595.20 chr13:95853543:- LINC02821^ENSG00000257139.1 chr12:70201715:+ YES_LDAS 0.0011 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr13--chr12]"] UGGT2--LINC02148 1 0 0.33 0.00 INCL_NON_REF_SPLICE UGGT2^ENSG00000102595.20 chr13:95853543:- LINC02148^ENSG00000250427.1 chr5:118282569:+ YES_LDAS 0.0011 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr13--chr5]"] UGGT2--AIMP1 1 0 0.33 0.00 ONLY_REF_SPLICE UGGT2^ENSG00000102595.20 chr13:95853543:- AIMP1^ENSG00000164022.17 chr4:106321177:+ YES_LDAS 0.0011 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr13--chr4]"] UBXN2A--GRHL1 1 0 1.00 0.00 ONLY_REF_SPLICE UBXN2A^ENSG00000173960.14 chr2:23940648:+ GRHL1^ENSG00000134317.18 chr2:9986124:+ YES_LDAS 0.0034 GT 1.6895 AG 1.6729 ["INTRACHROMOSOMAL[chr2:13.93Mb]"] UBR1--HMGN4 1 0 1.00 0.00 ONLY_REF_SPLICE UBR1^ENSG00000159459.12 chr15:43105942:- HMGN4^ENSG00000182952.5 chr6:26545127:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr6]"] UBR1--ATP11B 1 0 1.00 0.00 ONLY_REF_SPLICE UBR1^ENSG00000159459.12 chr15:43105942:- ATP11B^ENSG00000058063.16 chr3:182820260:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr3]"] UBQLNL--RAB11A 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBQLNL^ENSG00000175518.8 chr11:5515328:- RAB11A^ENSG00000103769.10 chr15:65877332:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr15]"] UBL7-AS1--ABCA13 1 0 1.00 0.00 ONLY_REF_SPLICE UBL7-AS1^ENSG00000247240.8 chr15:74479278:+ ABCA13^ENSG00000179869.15 chr7:48219354:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr7]"] UBL5--COIL 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBL5^ENSG00000198258.11 chr19:9829352:+ COIL^ENSG00000121058.5 chr17:56950196:- NO_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] UBE3A--GALK2 1 0 1.00 0.00 ONLY_REF_SPLICE UBE3A^ENSG00000114062.22 chr15:25438489:- GALK2^ENSG00000156958.15 chr15:49281987:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9086 ["INTRACHROMOSOMAL[chr15:23.72Mb]"] UBE2T--AL772363.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2T^ENSG00000077152.11 chr1:202333010:- AL772363.1^ENSG00000203987.3 chr9:137892543:- NO_LDAS 0.0034 GT 1.2419 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr9]"] UBE2N--CORO1C 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2N^ENSG00000177889.10 chr12:93441855:- CORO1C^ENSG00000110880.11 chr12:108701323:- YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr12:15.20Mb]"] UBE2L3--RAB14 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2L3^ENSG00000185651.15 chr22:21592956:+ RAB14^ENSG00000119396.11 chr9:121182942:- NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr9]"] UBE2K--OXCT1 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2K^ENSG00000078140.14 chr4:39698390:+ OXCT1^ENSG00000083720.13 chr5:41739491:- YES_LDAS 0.0034 GT 1.6895 AG 1.5628 ["INTERCHROMOSOMAL[chr4--chr5]"] UBE2H--RHOA 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2H^ENSG00000186591.13 chr7:129951278:- RHOA^ENSG00000067560.14 chr3:49360382:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr3]"] UBE2G1--ATF1 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2G1^ENSG00000132388.12 chr17:4366271:- ATF1^ENSG00000123268.9 chr12:50780140:+ NO_LDAS 0.0034 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr17--chr12]"] UBE2E1--NR1D2 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2E1^ENSG00000170142.12 chr3:23811510:+ NR1D2^ENSG00000174738.13 chr3:23954537:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr3:0.05Mb]","NEIGHBORS[53646]"] UBE2D4--KLHL36 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2D4^ENSG00000078967.13 chr7:43954394:+ KLHL36^ENSG00000135686.13 chr16:84662207:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr16]"] UBE2D1--LINC02717 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2D1^ENSG00000072401.15 chr10:58363686:+ LINC02717^ENSG00000285735.2 chr11:134997487:- NO_LDAS 0.0034 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chr10--chr11]"] UBAP1--STIM2 1 0 1.00 0.00 ONLY_REF_SPLICE UBAP1^ENSG00000165006.14 chr9:34179240:+ STIM2^ENSG00000109689.19 chr4:26858199:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr9--chr4]"] TYW1--CALN1 1 0 0.50 0.00 ONLY_REF_SPLICE TYW1^ENSG00000198874.13 chr7:67195337:+ CALN1^ENSG00000183166.11 chr7:72403442:- YES_LDAS 0.0017 GT 1.6729 AG 1.9086 ["INTRACHROMOSOMAL[chr7:4.54Mb]"] TXNL4A--TMEM233 1 0 1.00 0.00 INCL_NON_REF_SPLICE TXNL4A^ENSG00000141759.15 chr18:79973126:- TMEM233^ENSG00000224982.4 chr12:119593807:+ YES_LDAS 0.0034 GT 1.2729 AG 1.6729 ["INTERCHROMOSOMAL[chr18--chr12]"] TXNDC12--NFXL1 1 0 1.00 0.00 ONLY_REF_SPLICE TXNDC12^ENSG00000117862.13 chr1:52055000:- NFXL1^ENSG00000170448.12 chr4:47910994:- NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr4]"] TXN--SNX27 1 0 1.00 0.00 INCL_NON_REF_SPLICE TXN^ENSG00000136810.13 chr9:110251432:- SNX27^ENSG00000143376.14 chr1:151683356:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr1]"] TXLNG--DICER1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TXLNG^ENSG00000086712.13 chrX:16786589:+ DICER1-AS1^ENSG00000235706.8 chr14:95158879:+ YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr14]"] TWF2--SDHD 1 0 1.00 0.00 INCL_NON_REF_SPLICE TWF2^ENSG00000247596.10 chr3:52231088:- SDHD^ENSG00000204370.13 chr11:112086908:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr11]"] TVP23B--DLG2 1 0 0.50 0.00 ONLY_REF_SPLICE TVP23B^ENSG00000171928.14 chr17:18804266:+ DLG2^ENSG00000150672.18 chr11:85626753:- NO_LDAS 0.0017 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr11]"] TVP23B--AL049634.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TVP23B^ENSG00000171928.14 chr17:18791018:+ AL049634.3^ENSG00000271523.1 chr20:1591618:+ YES_LDAS 0.0034 GT 1.5546 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr20]"] TUBGCP5--PDCD4 1 0 1.00 0.00 ONLY_REF_SPLICE TUBGCP5^ENSG00000275835.5 chr15:23000569:- PDCD4^ENSG00000150593.18 chr10:110881233:+ NO_LDAS 0.0034 GT 1.7056 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr10]"] TUBB6--MGAT4A 1 0 1.00 0.00 ONLY_REF_SPLICE TUBB6^ENSG00000176014.13 chr18:12311053:+ MGAT4A^ENSG00000071073.13 chr2:98625835:- YES_LDAS 0.0034 GT 1.8062 AG 1.5301 ["INTERCHROMOSOMAL[chr18--chr2]"] TUBB2A--CFAP46 1 0 0.12 0.00 INCL_NON_REF_SPLICE TUBB2A^ENSG00000137267.7 chr6:3154050:- CFAP46^ENSG00000171811.14 chr10:132899628:- NO_LDAS 0.0004 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr10]"] TUBB1P1--TUBB 1 0 0.50 0.00 ONLY_REF_SPLICE TUBB1P1^ENSG00000249726.1 chrY:18387030:+ TUBB^ENSG00000196230.14 chr6:30722537:+ YES_LDAS 0.0017 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chrY--chr6]"] TUBA1C--RUFY2 1 0 1.00 0.00 ONLY_REF_SPLICE TUBA1C^ENSG00000167553.16 chr12:49258001:+ RUFY2^ENSG00000204130.14 chr10:68346084:- YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr10]"] TUBA1C--AKAP8L 1 0 0.50 0.00 INCL_NON_REF_SPLICE TUBA1C^ENSG00000167553.16 chr12:49273237:+ AKAP8L^ENSG00000011243.19 chr19:15400358:- NO_LDAS 0.0017 GT 1.9219 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr19]"] TTTY14--MYLK4 1 0 1.00 0.00 ONLY_REF_SPLICE TTTY14^ENSG00000176728.10 chrY:19077045:- MYLK4^ENSG00000145949.11 chr6:2749406:- YES_LDAS 0.0034 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chrY--chr6]"] TTLL4--ARID4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE TTLL4^ENSG00000135912.11 chr2:218738095:+ ARID4A^ENSG00000032219.19 chr14:58365518:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr14]"] TTLL13P--DNMT1 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL13P^ENSG00000213471.10 chr15:90253367:+ DNMT1^ENSG00000130816.17 chr19:10160063:- YES_LDAS 0.0034 GT 1.8256 AG 1.3753 ["INTERCHROMOSOMAL[chr15--chr19]"] TTLL10--MIER1 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL10^ENSG00000162571.14 chr1:1185109:+ MIER1^ENSG00000198160.15 chr1:66940028:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr1:65.73Mb]"] TTC5--ZNF664 1 0 1.00 0.00 ONLY_REF_SPLICE TTC5^ENSG00000136319.12 chr14:20291983:- ZNF664^ENSG00000179195.16 chr12:124011381:+ YES_LDAS 0.0034 GT 1.4566 AG 1.8323 ["INTERCHROMOSOMAL[chr14--chr12]"] TTC39C--C20orf194 1 0 1.00 0.00 ONLY_REF_SPLICE TTC39C^ENSG00000168234.13 chr18:24015038:+ C20orf194^ENSG00000088854.13 chr20:3298175:- YES_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr18--chr20]"] TTC37--AL592429.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TTC37^ENSG00000198677.12 chr5:95525398:- AL592429.1^ENSG00000218565.2 chr6:139338454:+ NO_LDAS 0.0034 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr6]"] TTC33--PRKAA1 1 0 1.00 0.00 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40746798:- PRKAA1^ENSG00000132356.11 chr5:40771863:- YES_LDAS 0.0034 GT 1.6402 AG 1.6402 ["DEEPEST2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[3416]"] TTC33--PRKAA1 1 0 1.00 0.00 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40728345:- PRKAA1^ENSG00000132356.11 chr5:40771863:- NO_LDAS 0.0034 GT 1.9086 AG 1.6402 ["DEEPEST2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[3416]"] TTC33--EOGT 1 0 1.00 0.00 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40603932:- EOGT^ENSG00000163378.14 chr3:68989017:- YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr3]"] TSPYL4--DCST1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TSPYL4^ENSG00000187189.11 chr6:116253475:- DCST1^ENSG00000163357.11 chr1:155035104:+ NO_LDAS 0.0017 GT 1.2729 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"] TSPAN9--BECN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSPAN9^ENSG00000011105.14 chr12:3083678:+ BECN1^ENSG00000126581.13 chr17:42823820:- NO_LDAS 0.0034 GT 1.5546 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr17]"] TSPAN3--HMG20A 1 0 1.00 0.00 ONLY_REF_SPLICE TSPAN3^ENSG00000140391.15 chr15:77070892:- HMG20A^ENSG00000140382.15 chr15:77458404:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr15:0.34Mb]"] TSPAN15--VPS26A 1 0 1.00 0.00 ONLY_REF_SPLICE TSPAN15^ENSG00000099282.10 chr10:69451690:+ VPS26A^ENSG00000122958.15 chr10:69132898:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8323 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr10:0.28Mb]"] TSG101--ALG12 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSG101^ENSG00000074319.13 chr11:18484067:- ALG12^ENSG00000182858.14 chr22:49903046:- NO_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr22]"] TRMT11--CENPW 1 0 1.00 0.00 ONLY_REF_SPLICE TRMT11^ENSG00000066651.20 chr6:126174911:+ CENPW^ENSG00000203760.9 chr6:126346205:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.14Mb]"] TRIM74--STAG3L1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRIM74^ENSG00000155428.12 chr7:72959886:- STAG3L1^ENSG00000205583.13 chr7:75385083:+ NO_LDAS 0.0017 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr7:2.39Mb]"] TRIM65--WDR93 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRIM65^ENSG00000141569.12 chr17:75892774:- WDR93^ENSG00000140527.15 chr15:89702002:+ NO_LDAS 0.0034 GC 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr15]"] TRIM52--RYR2 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- RYR2^ENSG00000198626.17 chr1:237270497:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr1]"] TRIM52--KMT5B 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- KMT5B^ENSG00000110066.15 chr11:68190152:- YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr11]"] TRIM52--ACY1 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- ACY1^ENSG00000243989.9 chr3:51985852:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr3]"] TRIM5--SUZ12 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRIM5^ENSG00000132256.19 chr11:5665334:- SUZ12^ENSG00000178691.11 chr17:31995722:+ NO_LDAS 0.0034 GT 1.4716 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr17]"] TRIM5--MSANTD4 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRIM5^ENSG00000132256.19 chr11:5665334:- MSANTD4^ENSG00000170903.11 chr11:106009783:- NO_LDAS 0.0034 GT 1.4716 AG 1.8256 ["INTRACHROMOSOMAL[chr11:100.06Mb]"] TRIM22--RRM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRIM22^ENSG00000132274.16 chr11:5698545:+ RRM2^ENSG00000171848.16 chr2:10129329:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr2]"] TRIL--KIF28P 1 0 0.33 0.00 INCL_NON_REF_SPLICE TRIL^ENSG00000255690.3 chr7:28956287:- KIF28P^ENSG00000223519.8 chr1:246787093:- NO_LDAS 0.0011 GT 1.8256 AG 1.6729 ["INTERCHROMOSOMAL[chr7--chr1]"] TRBV18--TRBC1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRBV18^ENSG00000276557.1 chr7:142616249:+ TRBC1^ENSG00000211751.9 chr7:142791694:+ NO_LDAS 0.0017 GT 1.8256 AG 1.7819 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.18Mb]"] TRBV11-3--TRBC1 1 0 0.50 0.00 ONLY_REF_SPLICE TRBV11-3^ENSG00000276597.1 chr7:142554929:+ TRBC1^ENSG00000211751.9 chr7:142791694:+ YES_LDAS 0.0017 GT 1.8892 AG 1.7819 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.24Mb]"] TRBV10-3--TRBC1 1 0 0.20 0.00 INCL_NON_REF_SPLICE TRBV10-3^ENSG00000275791.1 chr7:142544678:+ TRBC1^ENSG00000211751.9 chr7:142791694:+ YES_LDAS 0.0007 GT 1.9086 AG 1.7819 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.25Mb]"] TRAV2--TRAC 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAV2^ENSG00000211776.2 chr14:21712799:+ TRAC^ENSG00000277734.8 chr14:22547506:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr14:0.83Mb]"] TRAPPC8--CUL2 1 0 1.00 0.00 ONLY_REF_SPLICE TRAPPC8^ENSG00000153339.15 chr18:31839312:- CUL2^ENSG00000108094.16 chr10:35071339:- YES_LDAS 0.0034 GT 1.6402 AG 1.5656 ["INTERCHROMOSOMAL[chr18--chr10]"] TRAPPC5--ATG5 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAPPC5^ENSG00000181029.9 chr19:7682716:+ ATG5^ENSG00000057663.16 chr6:106202059:- YES_LDAS 0.0034 GC 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr19--chr6]"] TRAP1--AC141586.1 1 0 0.50 0.00 ONLY_REF_SPLICE TRAP1^ENSG00000126602.11 chr16:3717421:- AC141586.1^ENSG00000215154.6 chr16:2613960:+ YES_LDAS 0.0017 GT 1.5329 AG 1.8256 ["INTRACHROMOSOMAL[chr16:1.02Mb]"] TRAM2--PAQR8 1 0 1.00 0.00 ONLY_REF_SPLICE TRAM2^ENSG00000065308.5 chr6:52535783:- PAQR8^ENSG00000170915.9 chr6:52403162:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.09Mb]","LOCAL_INVERSION:-:+:[89631]"] TRAM1--PELI1 1 0 1.00 0.00 ONLY_REF_SPLICE TRAM1^ENSG00000067167.8 chr8:70608077:- PELI1^ENSG00000197329.12 chr2:64096610:- YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr2]"] TRAJ52--RAP1GDS1 1 0 1.00 0.00 ONLY_REF_SPLICE TRAJ52^ENSG00000211838.1 chr14:22486296:+ RAP1GDS1^ENSG00000138698.15 chr4:98343139:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chr4]"] TRAF3IP2--C5AR1 1 0 1.00 0.00 ONLY_REF_SPLICE TRAF3IP2^ENSG00000056972.20 chr6:111595703:- C5AR1^ENSG00000197405.8 chr19:47319781:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr19]"] TRAF2--GPR107 1 0 1.00 0.00 ONLY_REF_SPLICE TRAF2^ENSG00000127191.18 chr9:136899672:+ GPR107^ENSG00000148358.20 chr9:130079630:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr9:6.74Mb]"] TRA2A--KLHL7 1 0 1.00 0.00 ONLY_REF_SPLICE TRA2A^ENSG00000164548.11 chr7:23531789:- KLHL7^ENSG00000122550.18 chr7:23123777:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.33Mb]"] TPTEP2--AC092969.1 1 0 1.00 0.00 ONLY_REF_SPLICE TPTEP2^ENSG00000244627.5 chr22:38380370:- AC092969.1^ENSG00000240086.7 chr3:135379847:- YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr3]"] TPTE2P4--SDAD1 1 0 0.33 0.00 ONLY_REF_SPLICE TPTE2P4^ENSG00000215506.5 chrY:26534484:+ SDAD1^ENSG00000198301.12 chr4:75961308:- YES_LDAS 0.0011 GT 1.5850 AG 1.6402 ["INTERCHROMOSOMAL[chrY--chr4]"] TPK1--AC010378.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPK1^ENSG00000196511.14 chr7:144548491:- AC010378.1^ENSG00000286403.1 chr5:139511027:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr5]"] TPI1--AP000356.3 1 0 0.25 0.00 INCL_NON_REF_SPLICE TPI1^ENSG00000111669.15 chr12:6869173:+ AP000356.3^ENSG00000284128.1 chr22:24648059:+ NO_LDAS 0.0008 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr22]"] TPD52L2--STK11 1 0 0.50 0.00 INCL_NON_REF_SPLICE TPD52L2^ENSG00000101150.18 chr20:63873682:+ STK11^ENSG00000118046.16 chr19:1223756:+ NO_LDAS 0.0017 GT 1.5219 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr19]"] TPD52L2--ELL2 1 0 0.50 0.00 INCL_NON_REF_SPLICE TPD52L2^ENSG00000101150.18 chr20:63869441:+ ELL2^ENSG00000118985.16 chr5:95898291:- NO_LDAS 0.0017 GT 1.9899 AG 1.3996 ["INTERCHROMOSOMAL[chr20--chr5]"] TPD52L2--C3orf33 1 0 0.50 0.00 INCL_NON_REF_SPLICE TPD52L2^ENSG00000101150.18 chr20:63873682:+ C3orf33^ENSG00000174928.16 chr3:155806284:- NO_LDAS 0.0017 GT 1.5219 AG 1.8323 ["INTERCHROMOSOMAL[chr20--chr3]"] TPD52--ALS2 1 0 1.00 0.00 ONLY_REF_SPLICE TPD52^ENSG00000076554.15 chr8:80080315:- ALS2^ENSG00000003393.16 chr2:201715836:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr2]"] TPD52--AC087633.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TPD52^ENSG00000076554.15 chr8:80064478:- AC087633.2^ENSG00000277654.6 chr15:94855759:+ NO_LDAS 0.0034 GT 1.7968 AG 1.5329 ["INTERCHROMOSOMAL[chr8--chr15]"] TP53I3--PTDSS1 1 0 0.33 0.00 INCL_NON_REF_SPLICE TP53I3^ENSG00000115129.14 chr2:24080982:- PTDSS1^ENSG00000156471.13 chr8:96335748:+ NO_LDAS 0.0011 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr8]"] TOP3A--NBEAL1 1 0 1.00 0.00 ONLY_REF_SPLICE TOP3A^ENSG00000177302.15 chr17:18306891:- NBEAL1^ENSG00000144426.18 chr2:203208637:+ YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr2]"] TOP1MT--MX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOP1MT^ENSG00000184428.13 chr8:143321197:- MX1^ENSG00000157601.15 chr21:41435919:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr21]"] TOP1MT--FZD8 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOP1MT^ENSG00000184428.13 chr8:143334745:- FZD8^ENSG00000177283.8 chr10:35639743:- YES_LDAS 0.0034 GC 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr10]"] TOMM70--ANP32B 1 0 1.00 0.00 ONLY_REF_SPLICE TOMM70^ENSG00000154174.8 chr3:100400626:- ANP32B^ENSG00000136938.9 chr9:97994631:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr9]"] TOM1L1--CARF 1 0 1.00 0.00 ONLY_REF_SPLICE TOM1L1^ENSG00000141198.16 chr17:54905567:+ CARF^ENSG00000138380.18 chr2:202983506:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr2]"] TOLLIP--SERPINB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOLLIP^ENSG00000078902.16 chr11:1274856:- SERPINB1^ENSG00000021355.13 chr6:2840594:- NO_LDAS 0.0034 GT 1.2419 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr6]"] TNPO3--AC090114.3 1 0 0.50 0.00 ONLY_REF_SPLICE TNPO3^ENSG00000064419.13 chr7:129014979:- AC090114.3^ENSG00000280828.1 chr7:128615860:+ YES_LDAS 0.0017 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.34Mb]"] TNPO1--MED28 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNPO1^ENSG00000083312.18 chr5:72861914:+ MED28^ENSG00000118579.13 chr4:17624796:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr4]"] TNPO1--AC106845.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNPO1^ENSG00000083312.18 chr5:72893630:+ AC106845.1^ENSG00000287134.1 chr8:13205155:+ NO_LDAS 0.0034 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr5--chr8]"] TNNI3K--FPGT 1 0 1.00 0.00 ONLY_REF_SPLICE TNNI3K^ENSG00000116783.15 chr1:74271708:+ FPGT^ENSG00000254685.7 chr1:74233368:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8323 ["ConjoinG","INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[1301]"] TNFSF8--CYP2S1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TNFSF8^ENSG00000106952.8 chr9:114901285:- CYP2S1^ENSG00000167600.14 chr19:41201234:+ YES_LDAS 0.0034 GT 1.5656 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr19]"] TNFRSF10D--MTMR9 1 0 1.00 0.00 ONLY_REF_SPLICE TNFRSF10D^ENSG00000173530.6 chr8:23154874:- MTMR9^ENSG00000104643.10 chr8:11295194:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr8:11.81Mb]"] TMX4--ARID4B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMX4^ENSG00000125827.9 chr20:7982421:- ARID4B^ENSG00000054267.22 chr1:235229295:- NO_LDAS 0.0034 GT 1.4295 AG 1.2867 ["INTERCHROMOSOMAL[chr20--chr1]"] TMX2--CRAT 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMX2^ENSG00000213593.10 chr11:57737627:+ CRAT^ENSG00000095321.18 chr9:129098318:- NO_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr9]"] TMTC2--ENO4 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMTC2^ENSG00000179104.9 chr12:82687669:+ ENO4^ENSG00000188316.15 chr10:116879957:+ NO_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr10]"] TMEM53--UBIAD1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM53^ENSG00000126106.14 chr1:44674331:- UBIAD1^ENSG00000120942.14 chr1:11285644:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTRACHROMOSOMAL[chr1:33.34Mb]"] TMEM51--PSMB1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM51^ENSG00000171729.14 chr1:15153954:+ PSMB1^ENSG00000008018.9 chr6:170549113:- YES_LDAS 0.0034 GT 1.1589 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr6]"] TMEM273--DHPS 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM273^ENSG00000204161.14 chr10:49188455:- DHPS^ENSG00000095059.16 chr19:12681600:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr19]"] TMEM231P1--TMEM170A 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM231P1^ENSG00000262583.1 chr16:75516203:- TMEM170A^ENSG00000166822.13 chr16:75452697:- YES_LDAS 0.0034 GT 1.8062 AG 1.8295 ["INTRACHROMOSOMAL[chr16:0.03Mb]","NEIGHBORS[34291]"] TMEM219--AMZ2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM219^ENSG00000149932.17 chr16:29963589:+ AMZ2^ENSG00000196704.14 chr17:68254404:+ YES_LDAS 0.0034 GT 1.5219 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr17]"] TMEM200C--AC073548.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM200C^ENSG00000206432.4 chr18:5890417:- AC073548.1^ENSG00000279861.1 chr19:47488389:- NO_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTERCHROMOSOMAL[chr18--chr19]"] TMEM192--AL845331.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE TMEM192^ENSG00000170088.14 chr4:165072337:- AL845331.1^ENSG00000259916.1 chr2:94594744:+ NO_LDAS 0.0011 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr2]"] TMEM179B--PRPF19 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM179B^ENSG00000185475.11 chr11:62789346:+ PRPF19^ENSG00000110107.9 chr11:60901309:- NO_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr11:1.88Mb]"] TMEM170B--TBC1D12 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM170B^ENSG00000205269.6 chr6:11538374:+ TBC1D12^ENSG00000108239.9 chr10:94403291:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr10]"] TMEM145--INTS6 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM145^ENSG00000167619.13 chr19:42324864:+ INTS6^ENSG00000102786.15 chr13:51452032:- NO_LDAS 0.0034 GT 1.6895 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr13]"] TMEM140--STK17A 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM140^ENSG00000146859.6 chr7:135148270:+ STK17A^ENSG00000164543.7 chr7:43595901:+ NO_LDAS 0.0034 GT 1.5628 AG 1.8062 ["INTRACHROMOSOMAL[chr7:91.50Mb]"] TMEM127--AKR7A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM127^ENSG00000135956.9 chr2:96265869:- AKR7A2^ENSG00000053371.13 chr1:19307354:- NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr1]"] TMEM104--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM104^ENSG00000109066.14 chr17:74819843:+ ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0034 GT 1.8062 AG 1.4566 ["INTERCHROMOSOMAL[chr17--chr18]"] TMED7--TICAM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMED7^ENSG00000134970.14 chr5:115616318:- TICAM2^ENSG00000243414.6 chr5:115581197:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.01Mb]","NEIGHBORS[10731]"] TMED5--EVI5 1 0 1.00 0.00 ONLY_REF_SPLICE TMED5^ENSG00000117500.13 chr1:93180054:- EVI5^ENSG00000067208.14 chr1:92625934:- NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr1:0.36Mb]"] TMED5--ABCD3 1 0 1.00 0.00 ONLY_REF_SPLICE TMED5^ENSG00000117500.13 chr1:93180054:- ABCD3^ENSG00000117528.14 chr1:94458607:+ YES_LDAS 0.0034 GT 1.8892 AG 1.3383 ["INTRACHROMOSOMAL[chr1:1.24Mb]"] TMED4--ANAPC5 1 0 1.00 0.00 ONLY_REF_SPLICE TMED4^ENSG00000158604.15 chr7:44581093:- ANAPC5^ENSG00000089053.13 chr12:121330672:- YES_LDAS 0.0034 GC 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr12]"] TMED10--RAD51C 1 0 1.00 0.00 ONLY_REF_SPLICE TMED10^ENSG00000170348.9 chr14:75176355:- RAD51C^ENSG00000108384.15 chr17:58720746:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7056 ["INTERCHROMOSOMAL[chr14--chr17]"] TMCC1--DTHD1 1 0 1.00 0.00 ONLY_REF_SPLICE TMCC1^ENSG00000172765.17 chr3:129827803:- DTHD1^ENSG00000197057.10 chr4:36343502:+ YES_LDAS 0.0034 GT 1.6729 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr4]"] TMA16--LINC00114 1 0 0.25 0.00 INCL_NON_REF_SPLICE TMA16^ENSG00000198498.10 chr4:163515455:+ LINC00114^ENSG00000223806.8 chr21:38740992:- NO_LDAS 0.0008 GC 1.5656 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr21]"] TM9SF1--ATP2B1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TM9SF1^ENSG00000100926.15 chr14:24194675:- ATP2B1^ENSG00000070961.16 chr12:89709293:- NO_LDAS 0.0017 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr12]"] TM2D1--HSPB11 1 0 1.00 0.00 ONLY_REF_SPLICE TM2D1^ENSG00000162604.12 chr1:61724902:- HSPB11^ENSG00000081870.12 chr1:53940097:- NO_LDAS 0.0034 GT 1.7232 AG 1.8323 ["INTRACHROMOSOMAL[chr1:7.74Mb]"] TIPARP-AS1--ZZZ3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIPARP-AS1^ENSG00000243926.2 chr3:156672088:- ZZZ3^ENSG00000036549.13 chr1:77584655:- YES_LDAS 0.0034 GT 1.5546 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr1]"] TIPARP--BZW1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TIPARP^ENSG00000163659.13 chr3:156705107:+ BZW1^ENSG00000082153.18 chr2:200820019:+ YES_LDAS 0.0017 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr2]"] TIMM13--ZDHHC11 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIMM13^ENSG00000099800.8 chr19:2426881:- ZDHHC11^ENSG00000188818.12 chr5:840597:- YES_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr19--chr5]"] TIMM10--SLC15A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIMM10^ENSG00000134809.9 chr11:57528647:- SLC15A2^ENSG00000163406.11 chr3:121943257:+ YES_LDAS 0.0034 GT 1.5850 AG 1.4566 ["INTERCHROMOSOMAL[chr11--chr3]"] TIA1--CBLB 1 0 1.00 0.00 ONLY_REF_SPLICE TIA1^ENSG00000116001.17 chr2:70227735:- CBLB^ENSG00000114423.23 chr3:105678571:- YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr3]"] THEMIS--PAN3 1 0 1.00 0.00 ONLY_REF_SPLICE THEMIS^ENSG00000172673.11 chr6:127900842:- PAN3^ENSG00000152520.14 chr13:28256292:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr13]"] THEMIS--IPCEF1 1 0 1.00 0.00 ONLY_REF_SPLICE THEMIS^ENSG00000172673.11 chr6:127812883:- IPCEF1^ENSG00000074706.13 chr6:154223243:- YES_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTRACHROMOSOMAL[chr6:26.24Mb]"] THEMIS--APMAP 1 0 1.00 0.00 ONLY_REF_SPLICE THEMIS^ENSG00000172673.11 chr6:127812883:- APMAP^ENSG00000101474.12 chr20:24973737:- YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr20]"] THBS4--OR5AZ1P 1 0 1.00 0.00 INCL_NON_REF_SPLICE THBS4^ENSG00000113296.14 chr5:80071180:+ OR5AZ1P^ENSG00000180714.3 chr11:57917326:- NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr11]"] THBS2--AL365273.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE THBS2^ENSG00000186340.17 chr6:169241914:- AL365273.1^ENSG00000240527.1 chr10:95833471:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr10]"] TGFA--SLC39A10 1 0 1.00 0.00 ONLY_REF_SPLICE TGFA^ENSG00000163235.16 chr2:70514859:- SLC39A10^ENSG00000196950.14 chr2:195680032:+ YES_LDAS 0.0034 GT 1.7819 AG 1.2419 ["INTRACHROMOSOMAL[chr2:125.02Mb]"] TFF2--ADPRS 1 0 1.00 0.00 ONLY_REF_SPLICE TFF2^ENSG00000160181.9 chr21:42350879:- ADPRS^ENSG00000116863.11 chr1:36091244:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr1]"] TFEC--SLC12A6 1 0 1.00 0.00 ONLY_REF_SPLICE TFEC^ENSG00000105967.16 chr7:116030633:- SLC12A6^ENSG00000140199.13 chr15:34261020:- YES_LDAS 0.0034 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr15]"] TES--FEM1A 1 0 0.17 0.00 INCL_NON_REF_SPLICE TES^ENSG00000135269.18 chr7:116250442:+ FEM1A^ENSG00000141965.5 chr19:4792455:+ NO_LDAS 0.0006 GC 1.7819 AG 1.5301 ["INTERCHROMOSOMAL[chr7--chr19]"] TERF1--MOB1A 1 0 1.00 0.00 ONLY_REF_SPLICE TERF1^ENSG00000147601.15 chr8:73009205:+ MOB1A^ENSG00000114978.18 chr2:74172752:- YES_LDAS 0.0034 GT 1.5656 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr2]"] TENT5A--LINC00551 1 0 1.00 0.00 INCL_NON_REF_SPLICE TENT5A^ENSG00000112773.16 chr6:81749616:- LINC00551^ENSG00000272274.2 chr13:106714311:+ NO_LDAS 0.0034 GT 0.5665 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr13]"] TENT2--CDKAL1 1 0 1.00 0.00 ONLY_REF_SPLICE TENT2^ENSG00000164329.13 chr5:79613075:+ CDKAL1^ENSG00000145996.11 chr6:20649293:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr6]"] TDRKH--APOBR 1 0 1.00 0.00 INCL_NON_REF_SPLICE TDRKH^ENSG00000182134.16 chr1:151770096:- APOBR^ENSG00000184730.11 chr16:28495609:+ NO_LDAS 0.0034 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr16]"] TDRD3--SMIM14 1 0 1.00 0.00 ONLY_REF_SPLICE TDRD3^ENSG00000083544.16 chr13:60535233:+ SMIM14^ENSG00000163683.12 chr4:39605180:- YES_LDAS 0.0034 GT 1.7819 AG 1.7968 ["INTERCHROMOSOMAL[chr13--chr4]"] TCTN2--SLC22A8 1 0 1.00 0.00 INCL_NON_REF_SPLICE TCTN2^ENSG00000168778.13 chr12:123687035:+ SLC22A8^ENSG00000149452.16 chr11:62990196:- NO_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr11]"] TCTN1--AC005899.8 1 0 1.00 0.00 INCL_NON_REF_SPLICE TCTN1^ENSG00000204852.17 chr12:110645129:+ AC005899.8^ENSG00000279762.3 chr17:32436338:- NO_LDAS 0.0034 GT 1.9219 AG 1.7968 ["INTERCHROMOSOMAL[chr12--chr17]"] TCF19--ATAD3A 1 0 0.50 0.00 ONLY_REF_SPLICE TCF19^ENSG00000137310.12 chr6:31159707:+ ATAD3A^ENSG00000197785.14 chr1:1517311:+ YES_LDAS 0.0017 GT 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"] TCAIM--CRKL 1 0 1.00 0.00 ONLY_REF_SPLICE TCAIM^ENSG00000179152.20 chr3:44367708:+ CRKL^ENSG00000099942.13 chr22:20949711:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr22]"] TCAF1P1--TLL1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TCAF1P1^ENSG00000223459.6 chr7:143601417:+ TLL1^ENSG00000038295.8 chr4:166044371:+ NO_LDAS 0.0017 GT 1.5329 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr4]"] TBX4--TBX20 1 0 1.00 0.00 ONLY_REF_SPLICE TBX4^ENSG00000121075.11 chr17:61457631:+ TBX20^ENSG00000164532.11 chr7:35248841:- YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr17--chr7]"] TBL1X--CLCN4 1 0 1.00 0.00 ONLY_REF_SPLICE TBL1X^ENSG00000101849.17 chrX:9465447:+ CLCN4^ENSG00000073464.13 chrX:10220661:+ YES_LDAS 0.0034 GT 1.8323 AG 1.5301 ["INTRACHROMOSOMAL[chrX:0.42Mb]"] TBCEL--TECTA 1 0 1.00 0.00 ONLY_REF_SPLICE TBCEL^ENSG00000154114.12 chr11:121060085:+ TECTA^ENSG00000109927.11 chr11:121102665:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[10468]"] TBC1D7--TOM1L1 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D7^ENSG00000145979.18 chr6:13316571:- TOM1L1^ENSG00000141198.16 chr17:54947261:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr17]"] TBC1D3--ZFAND2A-DT 1 0 0.09 0.00 INCL_NON_REF_SPLICE TBC1D3^ENSG00000274611.3 chr17:38182121:- ZFAND2A-DT^ENSG00000229043.3 chr7:1162203:+ NO_LDAS 0.0003 GT 1.7056 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr7]"] TBC1D15--TC2N 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D15^ENSG00000121749.16 chr12:71907989:+ TC2N^ENSG00000165929.13 chr14:91802421:- YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr14]"] TAZ--PRAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TAZ^ENSG00000102125.16 chrX:154419184:+ PRAP1^ENSG00000165828.15 chr10:133350113:+ NO_LDAS 0.0017 GT 1.7465 AG 1.5219 ["INTERCHROMOSOMAL[chrX--chr10]"] TAX1BP3--SRSF1 1 0 1.00 0.00 ONLY_REF_SPLICE TAX1BP3^ENSG00000213977.8 chr17:3664679:- SRSF1^ENSG00000136450.13 chr17:58005041:- YES_LDAS 0.0034 GT 1.5058 AG 1.8295 ["INTRACHROMOSOMAL[chr17:54.33Mb]"] TASOR--PSMD14 1 0 1.00 0.00 ONLY_REF_SPLICE TASOR^ENSG00000163946.13 chr3:56660731:- PSMD14^ENSG00000115233.12 chr2:161408837:+ YES_LDAS 0.0034 GT 1.7232 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr2]"] TAS2R14--PRR4 1 0 1.00 0.00 ONLY_REF_SPLICE TAS2R14^ENSG00000212127.6 chr12:11034782:- PRR4^ENSG00000111215.12 chr12:10848407:- YES_LDAS 0.0034 GT 1.6402 AG 1.8062 ["INTRACHROMOSOMAL[chr12:0.09Mb]","NEIGHBORS[87933]"] TARS3--SLC25A18 1 0 1.00 0.00 INCL_NON_REF_SPLICE TARS3^ENSG00000185418.16 chr15:101721126:- SLC25A18^ENSG00000182902.14 chr22:17570213:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr22]"] TARID--ING1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TARID^ENSG00000227954.7 chr6:133889388:- ING1^ENSG00000153487.13 chr13:110715588:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr13]"] TARDBP--YIF1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE TARDBP^ENSG00000120948.19 chr1:11023584:+ YIF1A^ENSG00000174851.16 chr11:66284783:- YES_LDAS 0.0034 GT 1.7465 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr11]"] TARDBP--HAPLN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TARDBP^ENSG00000120948.19 chr1:11022177:+ HAPLN3^ENSG00000140511.12 chr15:88879465:- YES_LDAS 0.0034 AT 1.9899 AC 1.9899 ["INTERCHROMOSOMAL[chr1--chr15]"] TARBP1--RABGAP1L 1 0 1.00 0.00 ONLY_REF_SPLICE TARBP1^ENSG00000059588.10 chr1:234401181:- RABGAP1L^ENSG00000152061.23 chr1:174637375:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8256 ["INTRACHROMOSOMAL[chr1:59.40Mb]"] TANGO6--CHTF8 1 0 1.00 0.00 ONLY_REF_SPLICE TANGO6^ENSG00000103047.8 chr16:68843711:+ CHTF8^ENSG00000168802.14 chr16:69121493:- YES_LDAS 0.0034 GT 1.7968 AG 1.6402 ["INTRACHROMOSOMAL[chr16:0.03Mb]","LOCAL_INVERSION:+:-:[32828]"] TANGO2--DGCR8 1 0 1.00 0.00 ONLY_REF_SPLICE TANGO2^ENSG00000183597.16 chr22:20056013:+ DGCR8^ENSG00000128191.16 chr22:20085687:+ YES_LDAS 0.0034 GT 1.9329 AG 1.2729 ["INTRACHROMOSOMAL[chr22:0.01Mb]","NEIGHBORS[13068]"] TAGLN--NDUFV2 1 0 0.50 0.00 INCL_NON_REF_SPLICE TAGLN^ENSG00000149591.17 chr11:117199829:+ NDUFV2^ENSG00000178127.13 chr18:9124937:+ NO_LDAS 0.0017 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr18]"] TAF11--ZNF451 1 0 1.00 0.00 ONLY_REF_SPLICE TAF11^ENSG00000064995.18 chr6:34887787:- ZNF451^ENSG00000112200.17 chr6:57161084:+ YES_LDAS 0.0034 GT 1.3383 AG 1.8256 ["INTRACHROMOSOMAL[chr6:22.20Mb]"] TAB1--AC037193.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TAB1^ENSG00000100324.14 chr22:39428187:+ AC037193.1^ENSG00000287623.1 chr3:9103664:+ NO_LDAS 0.0034 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr3]"] SYT2--BCLAF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SYT2^ENSG00000143858.12 chr1:202601890:- BCLAF3^ENSG00000173681.16 chrX:19966408:- NO_LDAS 0.0034 GT 0.9710 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chrX]"] SYT11--USP9Y 1 0 1.00 0.00 INCL_NON_REF_SPLICE SYT11^ENSG00000132718.9 chr1:155881964:+ USP9Y^ENSG00000114374.13 chrY:12846333:+ YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chrY]"] SYT1--RTCB 1 0 1.00 0.00 INCL_NON_REF_SPLICE SYT1^ENSG00000067715.14 chr12:79449937:+ RTCB^ENSG00000100220.12 chr22:32397995:- NO_LDAS 0.0034 GT 1.2867 AG 1.7056 ["INTERCHROMOSOMAL[chr12--chr22]"] SYS1--DBNDD2 1 0 1.00 0.00 ONLY_REF_SPLICE SYS1^ENSG00000204070.10 chr20:45365686:+ DBNDD2^ENSG00000244274.8 chr20:45408460:+ YES_LDAS 0.0034 GT 1.7232 AG 1.9329 ["INTRACHROMOSOMAL[chr20:0.03Mb]","NEIGHBORS[29259]"] SYNPO2--USP53 1 0 1.00 0.00 ONLY_REF_SPLICE SYNPO2^ENSG00000172403.11 chr4:118889141:+ USP53^ENSG00000145390.11 chr4:119291165:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr4:0.15Mb]"] SYNJ1--RAB31 1 0 1.00 0.00 ONLY_REF_SPLICE SYNJ1^ENSG00000159082.18 chr21:32726772:- RAB31^ENSG00000168461.13 chr18:9845582:+ YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr21--chr18]"] SYK--FANCC 1 0 1.00 0.00 ONLY_REF_SPLICE SYK^ENSG00000165025.15 chr9:90801893:+ FANCC^ENSG00000158169.13 chr9:95249369:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr9:4.20Mb]"] SYF2--SYF2P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SYF2^ENSG00000117614.10 chr1:25227442:- SYF2P1^ENSG00000258350.1 chr14:30542170:- NO_LDAS 0.0034 GT 1.5546 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr14]"] SWI5--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE SWI5^ENSG00000175854.14 chr9:128276755:+ STAU2^ENSG00000040341.18 chr8:73709162:- YES_LDAS 0.0034 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr8]"] SUSD2--ELOBP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUSD2^ENSG00000099994.11 chr22:24185295:+ ELOBP4^ENSG00000234167.1 chr10:34488664:- NO_LDAS 0.0034 GT 1.5058 AG 1.8323 ["INTERCHROMOSOMAL[chr22--chr10]"] SUPV3L1--RNF34 1 0 1.00 0.00 ONLY_REF_SPLICE SUPV3L1^ENSG00000156502.14 chr10:69180562:+ RNF34^ENSG00000170633.16 chr12:121416159:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr12]"] SUPT20H--BRD8 1 0 1.00 0.00 ONLY_REF_SPLICE SUPT20H^ENSG00000102710.20 chr13:37012192:- BRD8^ENSG00000112983.18 chr5:138172826:- NO_LDAS 0.0034 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr13--chr5]"] SUMF1--TBC1D5 1 0 1.00 0.00 ONLY_REF_SPLICE SUMF1^ENSG00000144455.14 chr3:4376330:- TBC1D5^ENSG00000131374.14 chr3:17623913:- YES_LDAS 0.0034 GT 1.9899 AG 1.8323 ["INTRACHROMOSOMAL[chr3:12.69Mb]"] SUMF1--RYK 1 0 1.00 0.00 ONLY_REF_SPLICE SUMF1^ENSG00000144455.14 chr3:4466976:- RYK^ENSG00000163785.13 chr3:134195182:- YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr3:129.60Mb]"] SULT1C2--PPCS 1 0 1.00 0.00 ONLY_REF_SPLICE SULT1C2^ENSG00000198203.10 chr2:108294354:+ PPCS^ENSG00000127125.9 chr1:42457247:+ YES_LDAS 0.0034 GT 1.6729 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr1]"] SULT1C2--JMJD6 1 0 1.00 0.00 ONLY_REF_SPLICE SULT1C2^ENSG00000198203.10 chr2:108294354:+ JMJD6^ENSG00000070495.15 chr17:76721933:- YES_LDAS 0.0034 GT 1.6729 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr17]"] SUGT1P1--NOL6 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUGT1P1^ENSG00000226823.1 chr9:33503827:- NOL6^ENSG00000165271.17 chr9:33472412:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[29725]"] SUCLG2--VGLL3 1 0 1.00 0.00 ONLY_REF_SPLICE SUCLG2^ENSG00000172340.15 chr3:67495798:- VGLL3^ENSG00000206538.9 chr3:86947067:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr3:19.22Mb]"] SUCLG2--DIPK2A 1 0 1.00 0.00 ONLY_REF_SPLICE SUCLG2^ENSG00000172340.15 chr3:67400731:- DIPK2A^ENSG00000181744.9 chr3:143985543:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr3:76.32Mb]"] STYX--CGRRF1 1 0 1.00 0.00 ONLY_REF_SPLICE STYX^ENSG00000198252.12 chr14:52730531:+ CGRRF1^ENSG00000100532.13 chr14:54530049:+ YES_LDAS 0.0034 GT 1.5219 AG 1.9899 ["INTRACHROMOSOMAL[chr14:1.73Mb]"] STX2--RSPH4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE STX2^ENSG00000111450.14 chr12:130806982:- RSPH4A^ENSG00000111834.13 chr6:116632349:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr6]"] STX18-AS1--MSX1 1 0 1.00 0.00 ONLY_REF_SPLICE STX18-AS1^ENSG00000247708.8 chr4:4649542:+ MSX1^ENSG00000163132.8 chr4:4862701:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5628 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr4:0.07Mb]","NEIGHBORS[72306]"] STX12--DNAH10OS 1 0 1.00 0.00 INCL_NON_REF_SPLICE STX12^ENSG00000117758.14 chr1:27801819:+ DNAH10OS^ENSG00000250091.3 chr12:123934173:- NO_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr12]"] STRIP2--SLC25A43 1 0 1.00 0.00 INCL_NON_REF_SPLICE STRIP2^ENSG00000128578.10 chr7:129458409:+ SLC25A43^ENSG00000077713.19 chrX:119406526:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chrX]"] STON2--ARID4B 1 0 1.00 0.00 ONLY_REF_SPLICE STON2^ENSG00000140022.13 chr14:81324017:- ARID4B^ENSG00000054267.22 chr1:235260752:- YES_LDAS 0.0034 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr1]"] STN1--AKR1E2 1 0 1.00 0.00 ONLY_REF_SPLICE STN1^ENSG00000107960.11 chr10:103917462:- AKR1E2^ENSG00000165568.18 chr10:4830675:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTRACHROMOSOMAL[chr10:99.03Mb]"] STK38L--MED21 1 0 1.00 0.00 ONLY_REF_SPLICE STK38L^ENSG00000211455.8 chr12:27297854:+ MED21^ENSG00000152944.9 chr12:27030734:+ NO_LDAS 0.0034 GT 1.3996 AG 1.9656 ["DEEPEST2019","INTRACHROMOSOMAL[chr12:0.18Mb]"] STK38--ELK4 1 0 1.00 0.00 ONLY_REF_SPLICE STK38^ENSG00000112079.9 chr6:36496711:- ELK4^ENSG00000158711.14 chr1:205619073:- YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] STK3--MATN2 1 0 1.00 0.00 ONLY_REF_SPLICE STK3^ENSG00000104375.17 chr8:98526742:- MATN2^ENSG00000132561.14 chr8:97994480:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr8:0.33Mb]"] STIMATE--PDXDC2P 1 0 1.00 0.00 ONLY_REF_SPLICE STIMATE^ENSG00000213533.13 chr3:52897291:- PDXDC2P^ENSG00000255185.6 chr16:70014167:- YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr16]"] STIM2--ARAP2 1 0 1.00 0.00 ONLY_REF_SPLICE STIM2^ENSG00000109689.19 chr4:26861369:+ ARAP2^ENSG00000047365.12 chr4:36214480:- YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr4:8.92Mb]"] STAU2--MED9 1 0 0.50 0.00 ONLY_REF_SPLICE STAU2^ENSG00000040341.18 chr8:73552012:- MED9^ENSG00000141026.6 chr17:17491279:+ YES_LDAS 0.0017 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr17]"] STAU1--CPNE1 1 0 1.00 0.00 ONLY_REF_SPLICE STAU1^ENSG00000124214.21 chr20:49188116:- CPNE1^ENSG00000214078.13 chr20:35632923:- YES_LDAS 0.0034 GT 1.5656 AG 1.9086 ["INTRACHROMOSOMAL[chr20:13.45Mb]"] STARD7--MTO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STARD7^ENSG00000084090.14 chr2:96193084:- MTO1^ENSG00000135297.17 chr6:73462080:+ NO_LDAS 0.0034 GT 1.7056 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr6]"] STARD4-AS1--MSI1 1 0 0.50 0.00 INCL_NON_REF_SPLICE STARD4-AS1^ENSG00000246859.3 chr5:111734337:+ MSI1^ENSG00000135097.7 chr12:120369147:- NO_LDAS 0.0017 GT 1.6895 AG 0.9183 ["INTERCHROMOSOMAL[chr5--chr12]"] STAMBP--TMEM132D 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAMBP^ENSG00000124356.16 chr2:73862302:+ TMEM132D^ENSG00000151952.16 chr12:129078662:- NO_LDAS 0.0034 GT 1.3383 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr12]"] STAM2--EFHC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAM2^ENSG00000115145.10 chr2:152123766:- EFHC1^ENSG00000096093.16 chr6:52413034:+ NO_LDAS 0.0034 GT 1.7056 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr6]"] STAM2--APPL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAM2^ENSG00000115145.10 chr2:152133402:- APPL1^ENSG00000157500.12 chr3:57270341:+ NO_LDAS 0.0034 GT 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr3]"] STAG2--SETX 1 0 1.00 0.00 ONLY_REF_SPLICE STAG2^ENSG00000101972.19 chrX:124022671:+ SETX^ENSG00000107290.14 chr9:132300803:- NO_LDAS 0.0034 GT 1.5058 AG 1.7819 ["INTERCHROMOSOMAL[chrX--chr9]"] STAG2--ARHGEF6 1 0 1.00 0.00 ONLY_REF_SPLICE STAG2^ENSG00000101972.19 chrX:123961856:+ ARHGEF6^ENSG00000129675.16 chrX:136747592:- YES_LDAS 0.0034 GT 1.8323 AG 1.7968 ["INTRACHROMOSOMAL[chrX:12.24Mb]"] STAC--UBE2E2 1 0 1.00 0.00 ONLY_REF_SPLICE STAC^ENSG00000144681.11 chr3:36443640:+ UBE2E2^ENSG00000182247.10 chr3:23208692:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr3:12.79Mb]"] ST3GAL6--CRYBG3 1 0 1.00 0.00 ONLY_REF_SPLICE ST3GAL6^ENSG00000064225.12 chr3:98772916:+ CRYBG3^ENSG00000080200.10 chr3:97843195:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.79Mb]"] SSR3--METTL14 1 0 1.00 0.00 INCL_NON_REF_SPLICE SSR3^ENSG00000114850.7 chr3:156553655:- METTL14^ENSG00000145388.15 chr4:118705647:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr4]"] SSNA1--AC112236.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SSNA1^ENSG00000176101.12 chr9:137189265:+ AC112236.3^ENSG00000286896.1 chr4:139576336:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr4]"] SSBP2--DHDDS 1 0 1.00 0.00 ONLY_REF_SPLICE SSBP2^ENSG00000145687.16 chr5:81615473:- DHDDS^ENSG00000117682.17 chr1:26446316:+ YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr1]"] SS18L2--VPS33B 1 0 1.00 0.00 ONLY_REF_SPLICE SS18L2^ENSG00000008324.12 chr3:42581958:+ VPS33B^ENSG00000184056.15 chr15:91009846:- NO_LDAS 0.0034 GT 1.5219 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr15]"] SRSF3--HHAT 1 0 1.00 0.00 ONLY_REF_SPLICE SRSF3^ENSG00000112081.17 chr6:36598526:+ HHAT^ENSG00000054392.13 chr1:210362852:+ NO_LDAS 0.0034 GC 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr6--chr1]"] SRSF2--RN7SL712P 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRSF2^ENSG00000161547.17 chr17:76736173:- RN7SL712P^ENSG00000266828.2 chrX:115992659:- NO_LDAS 0.0034 GT 1.2729 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chrX]"] SRGAP3-AS3--WNT2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRGAP3-AS3^ENSG00000227929.4 chr3:9218357:+ WNT2B^ENSG00000134245.18 chr1:112526845:+ NO_LDAS 0.0034 GT 1.3996 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr1]"] SRGAP1--SLX4IP 1 0 1.00 0.00 ONLY_REF_SPLICE SRGAP1^ENSG00000196935.9 chr12:63844883:+ SLX4IP^ENSG00000149346.15 chr20:10556231:+ YES_LDAS 0.0034 GT 1.7232 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr20]"] SPRING1--AC067942.2 1 0 0.25 0.00 INCL_NON_REF_SPLICE SPRING1^ENSG00000111412.6 chr12:116737790:- AC067942.2^ENSG00000248113.2 chr4:82580299:- NO_LDAS 0.0008 GT 1.9086 AG 1.1589 ["INTERCHROMOSOMAL[chr12--chr4]"] SPRED2--TGFA 1 0 1.00 0.00 ONLY_REF_SPLICE SPRED2^ENSG00000198369.10 chr2:65431962:- TGFA^ENSG00000163235.16 chr2:70514912:- YES_LDAS 0.0034 GT 1.4295 AG 1.5628 ["INTRACHROMOSOMAL[chr2:5.01Mb]"] SPRED1--ADGRA3 1 0 0.20 0.00 INCL_NON_REF_SPLICE SPRED1^ENSG00000166068.13 chr15:38253217:+ ADGRA3^ENSG00000152990.14 chr4:22436504:- NO_LDAS 0.0007 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr4]"] SPOPL--DARS1 1 0 1.00 0.00 ONLY_REF_SPLICE SPOPL^ENSG00000144228.9 chr2:138502119:+ DARS1^ENSG00000115866.11 chr2:135961498:- YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTRACHROMOSOMAL[chr2:2.52Mb]"] SPOP--UBE3B 1 0 1.00 0.00 ONLY_REF_SPLICE SPOP^ENSG00000121067.19 chr17:49675895:- UBE3B^ENSG00000151148.14 chr12:109516765:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr12]"] SPHK1--LRRC45 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPHK1^ENSG00000176170.14 chr17:76386315:+ LRRC45^ENSG00000169683.8 chr17:82030719:+ YES_LDAS 0.0034 GT 1.8295 AG 1.4566 ["INTRACHROMOSOMAL[chr17:5.64Mb]"] SPG21--USP8 1 0 1.00 0.00 ONLY_REF_SPLICE SPG21^ENSG00000090487.11 chr15:64980864:- USP8^ENSG00000138592.14 chr15:50489801:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr15:14.45Mb]"] SPG21--AC073314.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SPG21^ENSG00000090487.11 chr15:64976475:- AC073314.1^ENSG00000261842.1 chr7:149424732:+ NO_LDAS 0.0017 GT 1.6895 AG 1.6049 ["INTERCHROMOSOMAL[chr15--chr7]"] SPCS1--PLS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPCS1^ENSG00000114902.14 chr3:52706254:+ PLS1^ENSG00000120756.13 chr3:142694474:+ YES_LDAS 0.0034 GC 1.9086 AG 1.2729 ["INTRACHROMOSOMAL[chr3:89.89Mb]"] SPATA7--S100PBP 1 0 1.00 0.00 ONLY_REF_SPLICE SPATA7^ENSG00000042317.17 chr14:88437903:+ S100PBP^ENSG00000116497.18 chr1:32825313:+ YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr1]"] SPATA6--NASP 1 0 1.00 0.00 ONLY_REF_SPLICE SPATA6^ENSG00000132122.12 chr1:48355670:- NASP^ENSG00000132780.17 chr1:45591223:+ NO_LDAS 0.0034 GT 1.6895 AG 1.9086 ["INTRACHROMOSOMAL[chr1:2.68Mb]"] SPATA2L--AL031280.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPATA2L^ENSG00000158792.16 chr16:89697872:- AL031280.1^ENSG00000233478.1 chr1:25645863:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr1]"] SPAST--AP005121.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPAST^ENSG00000021574.13 chr2:32114825:+ AP005121.2^ENSG00000263821.1 chr18:14979308:+ NO_LDAS 0.0034 GT 1.7819 AG 1.5219 ["INTERCHROMOSOMAL[chr2--chr18]"] SPAG5--FAM166C 1 0 0.50 0.00 INCL_NON_REF_SPLICE SPAG5^ENSG00000076382.17 chr17:28585366:- FAM166C^ENSG00000173557.15 chr2:26577708:+ NO_LDAS 0.0017 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr2]"] SPAG16--GMDS 1 0 1.00 0.00 ONLY_REF_SPLICE SPAG16^ENSG00000144451.19 chr2:213317356:+ GMDS^ENSG00000112699.11 chr6:1930230:- YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr6]"] SP4--TMEM51-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SP4^ENSG00000105866.15 chr7:21428792:+ TMEM51-AS1^ENSG00000175147.13 chr1:15120522:- NO_LDAS 0.0034 GT 1.8295 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr1]"] SOS2--SPRED2 1 0 1.00 0.00 ONLY_REF_SPLICE SOS2^ENSG00000100485.12 chr14:50204284:- SPRED2^ENSG00000198369.10 chr2:65332300:- NO_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr2]"] SORCS2--TCP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SORCS2^ENSG00000184985.16 chr4:7734315:+ TCP1^ENSG00000120438.12 chr6:159784815:- YES_LDAS 0.0017 GT 1.7968 AG 1.9219 ["INTERCHROMOSOMAL[chr4--chr6]"] SOHLH2--PTPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE SOHLH2^ENSG00000120669.16 chr13:36214582:- PTPA^ENSG00000119383.21 chr9:129142445:+ NO_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr9]"] SOCS5--LINC01119 1 0 1.00 0.00 ONLY_REF_SPLICE SOCS5^ENSG00000171150.9 chr2:46699449:+ LINC01119^ENSG00000239332.6 chr2:46855923:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9086 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr2:0.04Mb]","NEIGHBORS[36452]"] SNX5--TCP11L1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNX5^ENSG00000089006.17 chr20:17942650:- TCP11L1^ENSG00000176148.16 chr11:33057195:+ NO_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr11]"] SNX13--MACC1 1 0 1.00 0.00 ONLY_REF_SPLICE SNX13^ENSG00000071189.21 chr7:17940284:- MACC1^ENSG00000183742.13 chr7:20170781:- YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr7:2.19Mb]"] SNX13--LINC01322 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNX13^ENSG00000071189.21 chr7:17873462:- LINC01322^ENSG00000244128.7 chr3:165522625:+ NO_LDAS 0.0034 GT 1.4716 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr3]"] SNTB2--UTP4 1 0 1.00 0.00 ONLY_REF_SPLICE SNTB2^ENSG00000168807.16 chr16:69284244:+ UTP4^ENSG00000141076.18 chr16:69230383:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr16:0.04Mb]","NEIGHBORS_OVERLAP:+:+:[44001]"] SNTA1--ZSWIM9 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNTA1^ENSG00000101400.6 chr20:33443616:- ZSWIM9^ENSG00000185453.13 chr19:48196398:+ NO_LDAS 0.0034 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr20--chr19]"] SNRPFP1--CEP85L 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNRPFP1^ENSG00000231878.1 chr20:49729649:- CEP85L^ENSG00000111860.14 chr6:118470644:- YES_LDAS 0.0034 GT 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr6]"] SNRPD1--RBBP8 1 0 1.00 0.00 ONLY_REF_SPLICE SNRPD1^ENSG00000167088.11 chr18:21612443:+ RBBP8^ENSG00000101773.19 chr18:23022129:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr18:1.16Mb]"] SNPH--PCSK2 1 0 1.00 0.00 ONLY_REF_SPLICE SNPH^ENSG00000101298.15 chr20:1300711:+ PCSK2^ENSG00000125851.10 chr20:17260240:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8323 ["INTRACHROMOSOMAL[chr20:15.92Mb]"] SMURF2P1--LRRC37B 1 0 0.50 0.00 ONLY_REF_SPLICE SMURF2P1^ENSG00000248121.8 chr17:30610942:+ LRRC37B^ENSG00000185158.12 chr17:32049102:+ YES_LDAS 0.0017 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr17:1.39Mb]"] SMNDC1--PDCL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMNDC1^ENSG00000119953.14 chr10:110298648:- PDCL3^ENSG00000115539.14 chr2:100563424:+ NO_LDAS 0.0034 GT 1.7056 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr2]"] SMIM20--SLC9A4 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMIM20^ENSG00000250317.8 chr4:25914422:+ SLC9A4^ENSG00000180251.5 chr2:102473258:+ NO_LDAS 0.0034 GT 1.7819 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr2]"] SMIM14--ZNF347 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM14^ENSG00000163683.12 chr4:39638739:- ZNF347^ENSG00000197937.13 chr19:53142556:- NO_LDAS 0.0034 GT 1.4295 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr19]"] SMIM13--STIL 1 0 0.50 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ STIL^ENSG00000123473.16 chr1:47313156:- NO_LDAS 0.0017 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr1]"] SMIM13--PHGDH 1 0 0.50 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ PHGDH^ENSG00000092621.13 chr1:119669194:+ NO_LDAS 0.0017 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr1]"] SMIM13--HTATIP2 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ HTATIP2^ENSG00000109854.14 chr11:20364237:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr11]"] SMIM13--EXOC2 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ EXOC2^ENSG00000112685.14 chr6:532610:- YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTRACHROMOSOMAL[chr6:10.40Mb]"] SMIM13--C6orf62 1 0 1.00 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ C6orf62^ENSG00000112308.13 chr6:24716324:- YES_LDAS 0.0034 GT 1.6895 AG 1.5546 ["INTRACHROMOSOMAL[chr6:13.57Mb]"] SMG7--RGL1 1 0 1.00 0.00 ONLY_REF_SPLICE SMG7^ENSG00000116698.21 chr1:183533832:+ RGL1^ENSG00000143344.16 chr1:183742126:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.04Mb]","NEIGHBORS[37839]"] SMG1P7--HNRNPD 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMG1P7^ENSG00000261556.10 chr16:70226770:- HNRNPD^ENSG00000138668.19 chr4:82359639:- NO_LDAS 0.0034 GT 1.3996 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr4]"] SMBD1P--MUC20 1 0 0.50 0.00 ONLY_REF_SPLICE SMBD1P^ENSG00000283426.1 chr3:195708841:+ MUC20^ENSG00000176945.17 chr3:195724680:+ YES_LDAS 0.0017 GT 1.8892 AG 1.3710 ["INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[9241]"] SMBD1P--MUC20 1 0 1.00 0.00 ONLY_REF_SPLICE SMBD1P^ENSG00000283426.1 chr3:195708841:+ MUC20^ENSG00000176945.17 chr3:195729648:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[9241]"] SMARCA5-AS1--TWNK 1 0 0.33 0.00 INCL_NON_REF_SPLICE SMARCA5-AS1^ENSG00000245112.2 chr4:143514075:- TWNK^ENSG00000107815.10 chr10:100993987:+ NO_LDAS 0.0011 GC 1.8323 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr10]"] SMARCA1--AL008633.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMARCA1^ENSG00000102038.16 chrX:129447174:- AL008633.1^ENSG00000225689.2 chrX:129122193:- YES_LDAS 0.0034 GT 1.6895 AG 1.8256 ["INTRACHROMOSOMAL[chrX:0.12Mb]"] SLC9A7--AC091144.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC9A7^ENSG00000065923.10 chrX:46613289:- AC091144.2^ENSG00000254061.1 chr8:33436424:- NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr8]"] SLC7A5P1--VN2R17P 1 0 0.12 0.00 INCL_NON_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613275:- VN2R17P^ENSG00000213014.3 chr19:56317250:- NO_LDAS 0.0004 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr19]"] SLC7A2--ZDHHC2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC7A2^ENSG00000003989.18 chr8:17497237:+ ZDHHC2^ENSG00000104219.13 chr8:17195504:+ YES_LDAS 0.0034 GT 1.1589 AG 1.3996 ["INTRACHROMOSOMAL[chr8:0.27Mb]"] SLC66A2--TIMM21 1 0 1.00 0.00 ONLY_REF_SPLICE SLC66A2^ENSG00000122490.19 chr18:79943329:- TIMM21^ENSG00000075336.12 chr18:74155145:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr18:5.74Mb]"] SLC4A8--AC026785.2 1 0 0.25 0.00 INCL_NON_REF_SPLICE SLC4A8^ENSG00000050438.17 chr12:51424866:+ AC026785.2^ENSG00000248223.1 chr5:17354179:+ NO_LDAS 0.0008 GT 1.6729 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr5]"] SLC45A2--AMACR 1 0 1.00 0.00 ONLY_REF_SPLICE SLC45A2^ENSG00000164175.15 chr5:33982236:- AMACR^ENSG00000242110.8 chr5:34005899:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["ChimerPub","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[1472]"] SLC44A3--PDGFB 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC44A3^ENSG00000143036.17 chr1:94821056:+ PDGFB^ENSG00000100311.17 chr22:39240872:- NO_LDAS 0.0034 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr22]"] SLC39A4--CCDC171 1 0 0.33 0.00 INCL_NON_REF_SPLICE SLC39A4^ENSG00000147804.10 chr8:144412563:- CCDC171^ENSG00000164989.17 chr9:15971650:+ NO_LDAS 0.0011 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr9]"] SLC39A13--FAM83F 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC39A13^ENSG00000165915.14 chr11:47410395:+ FAM83F^ENSG00000133477.17 chr22:40021609:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr11--chr22]"] SLC38A11--CERS6 1 0 1.00 0.00 ONLY_REF_SPLICE SLC38A11^ENSG00000169507.9 chr2:164955209:- CERS6^ENSG00000172292.15 chr2:168561192:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9219 ["INTRACHROMOSOMAL[chr2:3.50Mb]"] SLC38A1--SLC2A13 1 0 1.00 0.00 ONLY_REF_SPLICE SLC38A1^ENSG00000111371.16 chr12:46239679:- SLC2A13^ENSG00000151229.13 chr12:39951365:- YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:6.08Mb]"] SLC38A1--DOCK2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC38A1^ENSG00000111371.16 chr12:46268865:- DOCK2^ENSG00000134516.18 chr5:169803058:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr5]"] SLC37A3--UBN2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC37A3^ENSG00000157800.18 chr7:140364408:- UBN2^ENSG00000157741.15 chr7:139269394:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr7:0.99Mb]"] SLC37A3--RBM15 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC37A3^ENSG00000157800.18 chr7:140364408:- RBM15^ENSG00000162775.17 chr1:110346604:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr1]"] SLC35E2A--TMEM41B 1 0 0.50 0.00 ONLY_REF_SPLICE SLC35E2A^ENSG00000215790.8 chr1:1734690:- TMEM41B^ENSG00000166471.11 chr11:9287806:- YES_LDAS 0.0017 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr11]"] SLC35E2A--LRRC1 1 0 0.50 0.00 ONLY_REF_SPLICE SLC35E2A^ENSG00000215790.8 chr1:1734690:- LRRC1^ENSG00000137269.15 chr6:53913854:+ NO_LDAS 0.0017 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"] SLC35B4--CDK14 1 0 1.00 0.00 ONLY_REF_SPLICE SLC35B4^ENSG00000205060.11 chr7:134299523:- CDK14^ENSG00000058091.17 chr7:90863175:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7465 ["INTRACHROMOSOMAL[chr7:43.08Mb]"] SLC35A1--ORC3 1 0 1.00 0.00 ONLY_REF_SPLICE SLC35A1^ENSG00000164414.18 chr6:87477539:+ ORC3^ENSG00000135336.16 chr6:87634845:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7232 ["INTRACHROMOSOMAL[chr6:0.08Mb]","NEIGHBORS[77731]"] SLC35A1--DUS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC35A1^ENSG00000164414.18 chr6:87508648:+ DUS2^ENSG00000167264.18 chr16:68079099:+ NO_LDAS 0.0034 GT 0.7219 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr16]"] SLC2A9--E2F7 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC2A9^ENSG00000109667.12 chr4:9826420:- E2F7^ENSG00000165891.16 chr12:77055999:- YES_LDAS 0.0034 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr4--chr12]"] SLC2A4--SLC2A3 1 0 1.00 0.00 ONLY_REF_SPLICE SLC2A4^ENSG00000181856.15 chr17:7283361:+ SLC2A3^ENSG00000059804.16 chr12:7933147:- NO_LDAS 0.0034 GT 1.9086 AG 1.6895 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr17--chr12]"] SLC25A43--MTMR4 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A43^ENSG00000077713.19 chrX:119399678:+ MTMR4^ENSG00000108389.9 chr17:58496330:- YES_LDAS 0.0034 GT 1.6729 AG 1.7465 ["INTERCHROMOSOMAL[chrX--chr17]"] SLC25A13--SEM1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A13^ENSG00000004864.14 chr7:96277196:- SEM1^ENSG00000127922.9 chr7:96673859:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["DEEPEST2019","INTRACHROMOSOMAL[chr7:0.16Mb]"] SLC25A13--AC134775.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC25A13^ENSG00000004864.14 chr7:96146556:- AC134775.1^ENSG00000255165.1 chr11:44072179:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr7--chr11]"] SLC24A4--MTF2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC24A4^ENSG00000140090.18 chr14:92325978:+ MTF2^ENSG00000143033.18 chr1:93110230:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr1]"] SLC22A15--SDHC 1 0 0.50 0.00 ONLY_REF_SPLICE SLC22A15^ENSG00000163393.13 chr1:115976714:+ SDHC^ENSG00000143252.16 chr1:161340594:+ YES_LDAS 0.0017 GT 1.7819 AG 1.6895 ["INTRACHROMOSOMAL[chr1:45.24Mb]"] SLC13A5--AC008555.2 1 0 0.20 0.00 INCL_NON_REF_SPLICE SLC13A5^ENSG00000141485.17 chr17:6686937:- AC008555.2^ENSG00000269086.3 chr19:34839281:+ NO_LDAS 0.0007 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr19]"] SLC11A2--AC009533.1 1 0 0.33 0.00 ONLY_REF_SPLICE SLC11A2^ENSG00000110911.17 chr12:51028177:- AC009533.1^ENSG00000111788.10 chr12:9288202:+ NO_LDAS 0.0011 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr12:41.67Mb]"] SIVA1--SYNE3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIVA1^ENSG00000184990.13 chr14:104753319:+ SYNE3^ENSG00000176438.12 chr14:95475835:- YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr14:9.28Mb]"] SIVA1--C5orf64 1 0 0.50 0.00 INCL_NON_REF_SPLICE SIVA1^ENSG00000184990.13 chr14:104756772:+ C5orf64^ENSG00000178722.13 chr5:61637768:+ NO_LDAS 0.0017 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr5]"] SIRT1--MAOB 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIRT1^ENSG00000096717.12 chr10:67916531:+ MAOB^ENSG00000069535.14 chrX:43769376:- YES_LDAS 0.0034 AT 1.8295 AC 1.7819 ["INTERCHROMOSOMAL[chr10--chrX]"] SIRPB1--AC090281.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SIRPB1^ENSG00000101307.16 chr20:1619869:- AC090281.1^ENSG00000253204.1 chr8:30921199:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr20--chr8]"] SIPA1L1--AC079145.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIPA1L1^ENSG00000197555.9 chr14:71735391:+ AC079145.1^ENSG00000227210.2 chr2:20001933:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr14--chr2]"] SHPRH--XPO4 1 0 1.00 0.00 INCL_NON_REF_SPLICE SHPRH^ENSG00000146414.16 chr6:145947493:- XPO4^ENSG00000132953.17 chr13:20778497:- NO_LDAS 0.0034 GT 1.7968 AG 1.5656 ["INTERCHROMOSOMAL[chr6--chr13]"] SHLD1--AC096719.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SHLD1^ENSG00000171984.15 chr20:5773043:+ AC096719.1^ENSG00000250039.4 chr4:22069960:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr4]"] SHH--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE SHH^ENSG00000164690.8 chr7:155811823:- ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0034 GT 1.9656 AG 1.4566 ["INTERCHROMOSOMAL[chr7--chr18]"] SGPP1--LINC02615 1 0 1.00 0.00 INCL_NON_REF_SPLICE SGPP1^ENSG00000126821.8 chr14:63727261:- LINC02615^ENSG00000251432.7 chr4:128292934:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr4]"] SGMS2--PAPSS1 1 0 1.00 0.00 ONLY_REF_SPLICE SGMS2^ENSG00000164023.14 chr4:107824793:+ PAPSS1^ENSG00000138801.9 chr4:107701285:- YES_LDAS 0.0034 GT 1.4295 AG 1.7056 ["INTRACHROMOSOMAL[chr4:0.10Mb]"] SGMS2--AIMP1 1 0 1.00 0.00 ONLY_REF_SPLICE SGMS2^ENSG00000164023.14 chr4:107908731:+ AIMP1^ENSG00000164022.17 chr4:106336869:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr4:1.48Mb]"] SGCE--PPP1R9A 1 0 1.00 0.00 ONLY_REF_SPLICE SGCE^ENSG00000127990.19 chr7:94655990:- PPP1R9A^ENSG00000158528.12 chr7:95161867:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTRACHROMOSOMAL[chr7:0.25Mb]"] SGCA--ZNF143 1 0 0.25 0.00 INCL_NON_REF_SPLICE SGCA^ENSG00000108823.16 chr17:50175720:+ ZNF143^ENSG00000166478.10 chr11:9508643:+ NO_LDAS 0.0008 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr11]"] SFXN3--CASP9 1 0 1.00 0.00 INCL_NON_REF_SPLICE SFXN3^ENSG00000107819.13 chr10:101036808:+ CASP9^ENSG00000132906.18 chr1:15524145:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr1]"] SFTPD-AS1--FCHSD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SFTPD-AS1^ENSG00000273372.1 chr10:79969157:+ FCHSD2^ENSG00000137478.15 chr11:73001134:- YES_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr11]"] SFRP2--LINC01085 1 0 1.00 0.00 INCL_NON_REF_SPLICE SFRP2^ENSG00000145423.5 chr4:153785864:- LINC01085^ENSG00000248698.6 chr4:14140022:+ NO_LDAS 0.0034 GT 1.5219 AG 1.4716 ["INTRACHROMOSOMAL[chr4:139.64Mb]"] SF3A3--GOLGA8CP 1 0 0.20 0.00 INCL_NON_REF_SPLICE SF3A3^ENSG00000183431.12 chr1:37969636:- GOLGA8CP^ENSG00000181984.11 chr15:20574018:+ NO_LDAS 0.0007 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr15]"] SETD7--PRMT9 1 0 1.00 0.00 ONLY_REF_SPLICE SETD7^ENSG00000145391.14 chr4:139529031:- PRMT9^ENSG00000164169.13 chr4:147657975:- YES_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr4:8.03Mb]"] SETD6--DMTF1 1 0 1.00 0.00 ONLY_REF_SPLICE SETD6^ENSG00000103037.12 chr16:58516343:+ DMTF1^ENSG00000135164.19 chr7:87163495:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr7]"] SESTD1--MTX2 1 0 1.00 0.00 ONLY_REF_SPLICE SESTD1^ENSG00000187231.14 chr2:179264499:- MTX2^ENSG00000128654.14 chr2:176296860:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr2:2.76Mb]"] SERPINI2--WDR49 1 0 1.00 0.00 ONLY_REF_SPLICE SERPINI2^ENSG00000114204.15 chr3:167474003:- WDR49^ENSG00000174776.11 chr3:167560228:- NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[320]"] SERPINA3--SERPINA5 1 0 1.00 0.00 ONLY_REF_SPLICE SERPINA3^ENSG00000196136.18 chr14:94615084:+ SERPINA5^ENSG00000188488.14 chr14:94590041:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8323 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr14:0.02Mb]","LOCAL_REARRANGEMENT:+:[19266]"] SERBP1--STK19 1 0 1.00 0.00 INCL_NON_REF_SPLICE SERBP1^ENSG00000142864.15 chr1:67424196:- STK19^ENSG00000204344.15 chr6:31973222:+ YES_LDAS 0.0034 GT 1.5546 AG 1.2729 ["INTERCHROMOSOMAL[chr1--chr6]"] SEPTIN7P2--CCDC40 1 0 1.00 0.00 ONLY_REF_SPLICE SEPTIN7P2^ENSG00000214765.8 chr7:45736787:- CCDC40^ENSG00000141519.15 chr17:80048583:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr17]"] SEPTIN14--SNTB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- SNTB1^ENSG00000172164.15 chr8:120693908:- YES_LDAS 0.0034 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr8]"] SEPTIN10--PHF11 1 0 1.00 0.00 ONLY_REF_SPLICE SEPTIN10^ENSG00000186522.15 chr2:109613798:- PHF11^ENSG00000136147.18 chr13:49522043:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr13]"] SEPSECS--DCAF13 1 0 1.00 0.00 ONLY_REF_SPLICE SEPSECS^ENSG00000109618.13 chr4:25160256:- DCAF13^ENSG00000164934.14 chr8:103430612:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9219 ["INTERCHROMOSOMAL[chr4--chr8]"] SEM1--ZNF547 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEM1^ENSG00000127922.9 chr7:96672722:- ZNF547^ENSG00000152433.15 chr19:57368544:+ YES_LDAS 0.0034 GT 1.2867 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr19]"] SEM1--ZC3H6 1 0 1.00 0.00 ONLY_REF_SPLICE SEM1^ENSG00000127922.9 chr7:96694798:- ZC3H6^ENSG00000188177.14 chr2:112299849:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr2]"] SELENOS--INTS8 1 0 1.00 0.00 ONLY_REF_SPLICE SELENOS^ENSG00000131871.15 chr15:101276541:- INTS8^ENSG00000164941.14 chr8:94867140:+ YES_LDAS 0.0034 GT 1.5301 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr8]"] SEL1L--FLRT2 1 0 1.00 0.00 ONLY_REF_SPLICE SEL1L^ENSG00000071537.14 chr14:81533675:- FLRT2^ENSG00000185070.11 chr14:85621139:+ NO_LDAS 0.0034 GT 1.5058 AG 1.9329 ["INTRACHROMOSOMAL[chr14:4.00Mb]"] SECISBP2--INPP5D 1 0 1.00 0.00 ONLY_REF_SPLICE SECISBP2^ENSG00000187742.15 chr9:89319797:+ INPP5D^ENSG00000168918.14 chr2:233177265:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr2]"] SEC61A2--DHTKD1 1 0 1.00 0.00 ONLY_REF_SPLICE SEC61A2^ENSG00000065665.21 chr10:12143195:+ DHTKD1^ENSG00000181192.12 chr10:12118749:+ NO_LDAS 0.0034 GT 1.9899 AG 1.9899 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:+:[6416]"] SEC61A2--C6orf62 1 0 1.00 0.00 ONLY_REF_SPLICE SEC61A2^ENSG00000065665.21 chr10:12149961:+ C6orf62^ENSG00000112308.13 chr6:24716324:- YES_LDAS 0.0034 GT 1.9329 AG 1.5546 ["INTERCHROMOSOMAL[chr10--chr6]"] SEC24D--METTL14 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24D^ENSG00000150961.15 chr4:118805843:- METTL14^ENSG00000145388.15 chr4:118687923:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8062 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_INVERSION:-:+:[7390]"] SEC24B-AS1--COL25A1 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24B-AS1^ENSG00000247950.7 chr4:109362752:- COL25A1^ENSG00000188517.16 chr4:109050179:- YES_LDAS 0.0034 GT 1.7968 AG 1.8062 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.04Mb]","NEIGHBORS[44723]"] SEC14L2--APOC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEC14L2^ENSG00000100003.18 chr22:30407562:+ APOC1^ENSG00000130208.9 chr19:44919177:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr19]"] SDR42E2--BECN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SDR42E2^ENSG00000183921.7 chr16:22170927:+ BECN1^ENSG00000126581.13 chr17:42819582:- NO_LDAS 0.0034 GT 1.9219 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr17]"] SDK2--LRRC7 1 0 1.00 0.00 INCL_NON_REF_SPLICE SDK2^ENSG00000069188.17 chr17:73644025:- LRRC7^ENSG00000033122.21 chr1:70134648:+ NO_LDAS 0.0034 GT 1.5656 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr1]"] SDK2--ATG7 1 0 1.00 0.00 INCL_NON_REF_SPLICE SDK2^ENSG00000069188.17 chr17:73644025:- ATG7^ENSG00000197548.12 chr3:11348342:+ NO_LDAS 0.0034 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr3]"] SDCCAG8--CEP170 1 0 1.00 0.00 ONLY_REF_SPLICE SDCCAG8^ENSG00000054282.16 chr1:243256240:+ CEP170^ENSG00000143702.16 chr1:243225321:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_INVERSION:+:-:[686]"] SCN7A--TTC21B 1 0 1.00 0.00 ONLY_REF_SPLICE SCN7A^ENSG00000136546.16 chr2:166456870:- TTC21B^ENSG00000123607.16 chr2:165890988:- YES_LDAS 0.0034 GT 1.6402 AG 1.5628 ["INTRACHROMOSOMAL[chr2:0.45Mb]"] SCN3A--PTPN22 1 0 1.00 0.00 INCL_NON_REF_SPLICE SCN3A^ENSG00000153253.19 chr2:165146941:- PTPN22^ENSG00000134242.16 chr1:113838158:- NO_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr1]"] SCAMP5--AC011933.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SCAMP5^ENSG00000198794.12 chr15:75012803:+ AC011933.2^ENSG00000264853.1 chr17:75373468:- NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr17]"] SCAMP1--COMMD10 1 0 1.00 0.00 ONLY_REF_SPLICE SCAMP1^ENSG00000085365.18 chr5:78360728:+ COMMD10^ENSG00000145781.9 chr5:116134068:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr5:37.60Mb]"] SCAI--FAM177B 1 0 1.00 0.00 ONLY_REF_SPLICE SCAI^ENSG00000173611.18 chr9:125142633:- FAM177B^ENSG00000197520.10 chr1:222746531:+ YES_LDAS 0.0034 GT 1.3996 AG 1.2366 ["INTERCHROMOSOMAL[chr9--chr1]"] SBF2--NDUFB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SBF2^ENSG00000133812.17 chr11:9779463:- NDUFB2^ENSG00000090266.13 chr7:140702866:+ YES_LDAS 0.0034 GT 1.7465 AG 1.3996 ["INTERCHROMOSOMAL[chr11--chr7]"] SAV1--GYPE 1 0 1.00 0.00 ONLY_REF_SPLICE SAV1^ENSG00000151748.15 chr14:50665179:- GYPE^ENSG00000197465.14 chr4:143880509:- NO_LDAS 0.0034 GT 1.9219 AG 1.8256 ["Greger_Normal","INTERCHROMOSOMAL[chr14--chr4]"] SATB2--TOB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SATB2^ENSG00000119042.17 chr2:199455934:- TOB2^ENSG00000183864.5 chr22:41437014:- YES_LDAS 0.0034 GC 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr22]"] SATB1-AS1--SYNPO2 1 0 0.50 0.00 INCL_NON_REF_SPLICE SATB1-AS1^ENSG00000228956.8 chr3:18516178:+ SYNPO2^ENSG00000172403.11 chr4:119030108:+ YES_LDAS 0.0017 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr4]"] SARAF--SAR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SARAF^ENSG00000133872.14 chr8:30066811:- SAR1B^ENSG00000152700.14 chr5:134605841:- YES_LDAS 0.0034 GT 1.9219 AG 1.5301 ["INTERCHROMOSOMAL[chr8--chr5]"] SAP30L-AS1--AP000866.6 1 0 0.50 0.00 INCL_NON_REF_SPLICE SAP30L-AS1^ENSG00000245275.8 chr5:154329591:- AP000866.6^ENSG00000279342.2 chr11:124791672:- YES_LDAS 0.0017 GT 1.9219 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr11]"] SAMHD1--POT1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAMHD1^ENSG00000101347.10 chr20:36951436:- POT1-AS1^ENSG00000224897.8 chr7:124993129:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6049 ["INTERCHROMOSOMAL[chr20--chr7]"] SAMD5--TMEM41B 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ TMEM41B^ENSG00000166471.11 chr11:9287806:- NO_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr11]"] SAMD14--CACUL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAMD14^ENSG00000167100.15 chr17:50110020:- CACUL1^ENSG00000151893.15 chr10:118686060:- NO_LDAS 0.0034 GT 1.8256 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr10]"] SAMD12--CPB2-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAMD12^ENSG00000177570.15 chr8:118580840:- CPB2-AS1^ENSG00000235903.9 chr13:46120638:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr13]"] SALL4--WBP1P1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SALL4^ENSG00000101115.13 chr20:51790970:- WBP1P1^ENSG00000231351.2 chr2:86930688:- NO_LDAS 0.0017 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr2]"] S100PBP--ENPP7P1 1 0 0.33 0.00 INCL_NON_REF_SPLICE S100PBP^ENSG00000116497.18 chr1:32835362:+ ENPP7P1^ENSG00000249188.1 chr8:8206886:+ NO_LDAS 0.0011 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr8]"] S100A13--SH3RF3 1 0 0.33 0.00 INCL_NON_REF_SPLICE S100A13^ENSG00000189171.14 chr1:153627185:- SH3RF3^ENSG00000172985.11 chr2:109398776:+ NO_LDAS 0.0011 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr2]"] RYR3-DT--ZDHHC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RYR3-DT^ENSG00000259446.6 chr15:33293970:- ZDHHC1^ENSG00000159714.12 chr16:67406424:- NO_LDAS 0.0034 GT 1.4566 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chr16]"] RYR3--MYO7A 1 0 1.00 0.00 INCL_NON_REF_SPLICE RYR3^ENSG00000198838.14 chr15:33539441:+ MYO7A^ENSG00000137474.22 chr11:77181960:+ NO_LDAS 0.0034 GT 1.7968 AG 1.2419 ["INTERCHROMOSOMAL[chr15--chr11]"] RYR2--CAMKMT 1 0 1.00 0.00 ONLY_REF_SPLICE RYR2^ENSG00000198626.17 chr1:237784972:+ CAMKMT^ENSG00000143919.15 chr2:44372795:+ NO_LDAS 0.0034 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr2]"] RYBP--CNTN4 1 0 1.00 0.00 ONLY_REF_SPLICE RYBP^ENSG00000163602.11 chr3:72446496:- CNTN4^ENSG00000144619.15 chr3:2866752:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["DEEPEST2019","TumorFusionsNAR2018","INTRACHROMOSOMAL[chr3:69.31Mb]"] RWDD2A--NCKAP5 1 0 0.50 0.00 INCL_NON_REF_SPLICE RWDD2A^ENSG00000013392.8 chr6:83196224:+ NCKAP5^ENSG00000176771.17 chr2:132785479:- NO_LDAS 0.0017 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr2]"] RTL6--LINC01203 1 0 1.00 0.00 INCL_NON_REF_SPLICE RTL6^ENSG00000188636.4 chr22:44495661:- LINC01203^ENSG00000226985.7 chrX:13334005:+ NO_LDAS 0.0034 GT 1.4256 AG 1.7465 ["INTERCHROMOSOMAL[chr22--chrX]"] RTKN2--CAT 1 0 1.00 0.00 ONLY_REF_SPLICE RTKN2^ENSG00000182010.11 chr10:62268551:- CAT^ENSG00000121691.7 chr11:34449192:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr11]"] RSPO2--EBAG9 1 0 1.00 0.00 ONLY_REF_SPLICE RSPO2^ENSG00000147655.12 chr8:108082545:- EBAG9^ENSG00000147654.15 chr8:109550810:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTRACHROMOSOMAL[chr8:1.46Mb]"] RSBN1L--NAT10 1 0 1.00 0.00 ONLY_REF_SPLICE RSBN1L^ENSG00000187257.16 chr7:77697055:+ NAT10^ENSG00000135372.9 chr11:34108211:+ NO_LDAS 0.0034 GT 1.6895 AG 1.5058 ["INTERCHROMOSOMAL[chr7--chr11]"] RRP1B--AGT 1 0 0.33 0.00 INCL_NON_REF_SPLICE RRP1B^ENSG00000160208.13 chr21:43675086:+ AGT^ENSG00000135744.9 chr1:230702402:- NO_LDAS 0.0011 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr21--chr1]"] RRP1B--AF064860.2 1 0 0.33 0.00 INCL_NON_REF_SPLICE RRP1B^ENSG00000160208.13 chr21:43675086:+ AF064860.2^ENSG00000231713.2 chr21:39729782:+ NO_LDAS 0.0011 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr21:3.93Mb]"] RRM2B--CAMTA1 1 0 1.00 0.00 ONLY_REF_SPLICE RRM2B^ENSG00000048392.12 chr8:102234725:- CAMTA1^ENSG00000171735.19 chr1:6871757:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr1]"] RRAS2--SLC2A13 1 0 1.00 0.00 ONLY_REF_SPLICE RRAS2^ENSG00000133818.14 chr11:14358763:- SLC2A13^ENSG00000151229.13 chr12:39951365:- YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr12]"] RRAD--DMKN 1 0 1.00 0.00 ONLY_REF_SPLICE RRAD^ENSG00000166592.12 chr16:66924810:- DMKN^ENSG00000161249.21 chr19:35497538:- YES_LDAS 0.0034 GT 1.5219 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr19]"] RPSAP24--TUT7 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPSAP24^ENSG00000235414.3 chr2:174043820:+ TUT7^ENSG00000083223.18 chr9:86346427:- NO_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr9]"] RPS6KC1--GALNT2 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KC1^ENSG00000136643.12 chr1:213117410:+ GALNT2^ENSG00000143641.10 chr1:230236014:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr1:16.78Mb]"] RPS6KC1--CCSER2 1 0 1.00 0.00 ONLY_REF_SPLICE RPS6KC1^ENSG00000136643.12 chr1:213051509:+ CCSER2^ENSG00000107771.17 chr10:84371014:+ YES_LDAS 0.0034 GT 1.7819 AG 1.3710 ["INTERCHROMOSOMAL[chr1--chr10]"] RPS18--TAP2 1 0 1.00 0.00 ONLY_REF_SPLICE RPS18^ENSG00000231500.7 chr6:33272122:+ TAP2^ENSG00000204267.16 chr6:32830440:- YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr6:0.43Mb]"] RPL7A--AL133406.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL7A^ENSG00000148303.17 chr9:133351336:+ AL133406.1^ENSG00000216639.1 chr6:105298873:+ NO_LDAS 0.0034 GC 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr6]"] RPL36A--ZMAT1 1 0 1.00 0.00 ONLY_REF_SPLICE RPL36A^ENSG00000241343.10 chrX:101391822:+ ZMAT1^ENSG00000166432.15 chrX:101904330:- NO_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chrX:0.49Mb]"] RPL23AP53--SEPTIN14 1 0 1.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:230804:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] RPL12--RPL12P34 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127450795:- RPL12P34^ENSG00000229824.1 chr13:68654742:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr13]"] RPL12--CD180 1 0 1.00 0.00 ONLY_REF_SPLICE RPL12^ENSG00000197958.13 chr9:127449281:- CD180^ENSG00000134061.5 chr5:67184585:- NO_LDAS 0.0034 GT 1.1033 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr5]"] RPH3AL--SAP30BP 1 0 1.00 0.00 ONLY_REF_SPLICE RPH3AL^ENSG00000181031.16 chr17:281768:- SAP30BP^ENSG00000161526.15 chr17:75693440:+ YES_LDAS 0.0034 GT 1.5628 AG 1.7232 ["INTRACHROMOSOMAL[chr17:75.28Mb]"] RPH3AL--NINJ2 1 0 1.00 0.00 ONLY_REF_SPLICE RPH3AL^ENSG00000181031.16 chr17:281768:- NINJ2^ENSG00000171840.12 chr12:566178:- NO_LDAS 0.0034 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr12]"] RP9P--AREG 1 0 1.00 0.00 INCL_NON_REF_SPLICE RP9P^ENSG00000205763.13 chr7:32916821:- AREG^ENSG00000109321.11 chr4:74445353:+ YES_LDAS 0.0034 GC 1.8323 AG 1.5546 ["INTERCHROMOSOMAL[chr7--chr4]"] RORA--B3GNT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RORA^ENSG00000069667.16 chr15:60495909:- B3GNT2^ENSG00000170340.11 chr2:62222212:+ YES_LDAS 0.0034 GT 1.7056 AG 1.5301 ["INTERCHROMOSOMAL[chr15--chr2]"] ROR1--AC034195.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ROR1^ENSG00000185483.12 chr1:63774508:+ AC034195.1^ENSG00000223727.6 chr3:3315577:- NO_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr3]"] RNU6ATAC--RNU4ATAC 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU6ATAC^ENSG00000221676.1 chr9:134164492:- RNU4ATAC^ENSG00000264229.1 chr2:121530958:+ YES_LDAS 0.0034 GC 1.8062 AC 1.8323 ["ChimerPub","HGNC_GENEFAM","INTERCHROMOSOMAL[chr9--chr2]"] RNU6-43P--MINDY4 1 0 0.33 0.00 INCL_NON_REF_SPLICE RNU6-43P^ENSG00000207029.1 chr10:102591600:+ MINDY4^ENSG00000106125.14 chr7:30791518:+ NO_LDAS 0.0011 AT 1.9329 AC 1.7465 ["INTERCHROMOSOMAL[chr10--chr7]"] RNU1-77P--RPS3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU1-77P^ENSG00000212170.1 chr15:82174282:- RPS3A^ENSG00000145425.10 chr4:151100583:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr4]"] RNU1-21P--OTUB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU1-21P^ENSG00000200197.1 chr11:123763986:+ OTUB1^ENSG00000167770.12 chr11:64001454:+ NO_LDAS 0.0034 AT 1.6895 AC 1.6729 ["INTRACHROMOSOMAL[chr11:59.76Mb]"] RNU1-108P--EPHA10 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU1-108P^ENSG00000199426.1 chr17:58666592:- EPHA10^ENSG00000183317.17 chr1:37719514:- NO_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr1]"] RNF8--LINC00677 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF8^ENSG00000112130.17 chr6:37368820:+ LINC00677^ENSG00000259717.1 chr14:103122859:- NO_LDAS 0.0034 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr14]"] RNF31--MAP3K13 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF31^ENSG00000092098.17 chr14:24151955:+ MAP3K13^ENSG00000073803.14 chr3:185480461:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr3]"] RNF2--MPZL1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF2^ENSG00000121481.11 chr1:185045649:+ MPZL1^ENSG00000197965.12 chr1:167772275:+ YES_LDAS 0.0034 GT 1.6402 AG 1.4295 ["INTRACHROMOSOMAL[chr1:17.25Mb]"] RNF168--THAP12 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF168^ENSG00000163961.4 chr3:196471979:- THAP12^ENSG00000137492.8 chr11:76358804:- YES_LDAS 0.0034 GC 1.4716 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr11]"] RNF152--SBF1P1 1 0 0.50 0.00 INCL_NON_REF_SPLICE RNF152^ENSG00000176641.11 chr18:61816077:- SBF1P1^ENSG00000248522.1 chr8:55454236:- NO_LDAS 0.0017 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr18--chr8]"] RNF149--LINC02615 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF149^ENSG00000163162.9 chr2:101281958:- LINC02615^ENSG00000251432.7 chr4:128474985:+ NO_LDAS 0.0034 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr4]"] RNF146--U2AF1 1 0 0.50 0.00 ONLY_REF_SPLICE RNF146^ENSG00000118518.16 chr6:127280340:+ U2AF1^ENSG00000160201.12 chr21:43093249:- YES_LDAS 0.0017 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr21]"] RNF144A--HGD 1 0 1.00 0.00 ONLY_REF_SPLICE RNF144A^ENSG00000151692.15 chr2:7030215:+ HGD^ENSG00000113924.12 chr3:120652651:- YES_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr3]"] RNF141--LYVE1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF141^ENSG00000110315.7 chr11:10519034:- LYVE1^ENSG00000133800.9 chr11:10564374:- YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTRACHROMOSOMAL[chr11:0.02Mb]","LOCAL_REARRANGEMENT:-:[15736]"] RNF139--FBXL3 1 0 1.00 0.00 ONLY_REF_SPLICE RNF139^ENSG00000170881.5 chr8:124475290:+ FBXL3^ENSG00000005812.11 chr13:77007788:- YES_LDAS 0.0034 GT 1.5219 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr13]"] RNF138--MSR1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF138^ENSG00000134758.14 chr18:32092886:+ MSR1^ENSG00000038945.15 chr8:16110218:- NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr8]"] RNF135--NAGPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF135^ENSG00000181481.14 chr17:30984643:+ NAGPA^ENSG00000103174.13 chr16:5031381:- NO_LDAS 0.0034 GT 1.6729 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr16]"] RNF13--RSRC1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF13^ENSG00000082996.20 chr3:149813353:+ RSRC1^ENSG00000174891.13 chr3:158298039:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr3:8.14Mb]"] RNF125--TTC39C 1 0 1.00 0.00 ONLY_REF_SPLICE RNF125^ENSG00000101695.9 chr18:32019027:+ TTC39C^ENSG00000168234.13 chr18:24064140:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr18:7.88Mb]"] RNF11--SPATA6 1 0 1.00 0.00 ONLY_REF_SPLICE RNF11^ENSG00000123091.5 chr1:51236879:+ SPATA6^ENSG00000132122.12 chr1:48413151:- YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTRACHROMOSOMAL[chr1:2.76Mb]"] RNASE11--ADAMTSL4-AS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNASE11^ENSG00000173464.14 chr14:20583635:- ADAMTSL4-AS2^ENSG00000237781.3 chr1:150556789:- NO_LDAS 0.0034 GT 0.9056 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr1]"] RNASE1--LINC00862 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNASE1^ENSG00000129538.14 chr14:20801771:- LINC00862^ENSG00000203721.7 chr1:200254055:- NO_LDAS 0.0034 GC 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr1]"] RN7SKP228--RN7SKP224 1 0 0.50 0.00 INCL_NON_REF_SPLICE RN7SKP228^ENSG00000222974.1 chr7:12876795:+ RN7SKP224^ENSG00000201010.1 chr2:48217657:+ YES_LDAS 0.0017 GT 1.7968 AG 1.3996 ["INTERCHROMOSOMAL[chr7--chr2]"] RMDN1--RPL23A 1 0 1.00 0.00 INCL_NON_REF_SPLICE RMDN1^ENSG00000176623.12 chr8:86505129:- RPL23A^ENSG00000198242.14 chr17:28723571:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr8--chr17]"] RIN3--GATA2 1 0 1.00 0.00 ONLY_REF_SPLICE RIN3^ENSG00000100599.16 chr14:92513976:+ GATA2^ENSG00000179348.12 chr3:128487076:- YES_LDAS 0.0034 GT 1.4295 AG 1.5656 ["INTERCHROMOSOMAL[chr14--chr3]"] RIMS1--PHACTR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RIMS1^ENSG00000079841.18 chr6:72313672:+ PHACTR1^ENSG00000112137.18 chr6:13230137:+ NO_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTRACHROMOSOMAL[chr6:58.60Mb]"] RIC1--KDM4C 1 0 1.00 0.00 ONLY_REF_SPLICE RIC1^ENSG00000107036.12 chr9:5629453:+ KDM4C^ENSG00000107077.19 chr9:6792972:+ YES_LDAS 0.0034 GT 1.9899 AG 1.6895 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr9:0.94Mb]"] RHOXF1-AS1--NOL10 1 0 1.00 0.00 ONLY_REF_SPLICE RHOXF1-AS1^ENSG00000258545.6 chrX:120139119:+ NOL10^ENSG00000115761.16 chr2:10684612:- NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr2]"] RHOU--KIF5C-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RHOU^ENSG00000116574.6 chr1:228736004:+ KIF5C-AS1^ENSG00000231079.7 chr2:148878393:- NO_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr2]"] RHOBTB3--LINC01554 1 0 1.00 0.00 INCL_NON_REF_SPLICE RHOBTB3^ENSG00000164292.13 chr5:95788858:+ LINC01554^ENSG00000236882.8 chr5:95838320:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8323 ["INTRACHROMOSOMAL[chr5:0.01Mb]","NEIGHBORS[13862]"] RHBDL2--TUBGCP5 1 0 1.00 0.00 ONLY_REF_SPLICE RHBDL2^ENSG00000158315.11 chr1:38915562:- TUBGCP5^ENSG00000275835.5 chr15:23011331:- YES_LDAS 0.0034 GT 1.8892 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr15]"] RHBDD1--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE RHBDD1^ENSG00000144468.17 chr2:226867318:+ PCCA^ENSG00000175198.17 chr13:100209332:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr13]"] RGSL1--DNAH3 1 0 1.00 0.00 ONLY_REF_SPLICE RGSL1^ENSG00000121446.20 chr1:182448364:+ DNAH3^ENSG00000158486.13 chr16:21136513:- NO_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr16]"] RGS16--AL031599.1 1 0 1.00 0.00 ONLY_REF_SPLICE RGS16^ENSG00000143333.7 chr1:182604216:- AL031599.1^ENSG00000224228.2 chr1:173063873:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr1:9.53Mb]"] RGS14--AMY2B 1 0 1.00 0.00 ONLY_REF_SPLICE RGS14^ENSG00000169220.18 chr5:177358069:+ AMY2B^ENSG00000240038.6 chr1:103565435:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr5--chr1]"] RGP1--SOX17 1 0 1.00 0.00 INCL_NON_REF_SPLICE RGP1^ENSG00000107185.10 chr9:35752845:+ SOX17^ENSG00000164736.6 chr8:54459705:+ NO_LDAS 0.0034 GC 1.9219 AG 1.3996 ["INTERCHROMOSOMAL[chr9--chr8]"] RFX7--UBR5-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE RFX7^ENSG00000181827.15 chr15:56243125:- UBR5-AS1^ENSG00000246263.3 chr8:102244005:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr8]"] RFX7--MIR3142HG 1 0 1.00 0.00 ONLY_REF_SPLICE RFX7^ENSG00000181827.15 chr15:56142778:- MIR3142HG^ENSG00000253522.6 chr5:160485299:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr5]"] RFC1--UGDH 1 0 1.00 0.00 ONLY_REF_SPLICE RFC1^ENSG00000035928.16 chr4:39366239:- UGDH^ENSG00000109814.12 chr4:39514184:- YES_LDAS 0.0034 GT 1.7465 AG 1.6729 ["INTRACHROMOSOMAL[chr4:0.13Mb]"] REX1BD--MED26 1 0 1.00 0.00 ONLY_REF_SPLICE REX1BD^ENSG00000006015.18 chr19:18588900:+ MED26^ENSG00000105085.11 chr19:16578409:- YES_LDAS 0.0034 GT 1.4295 AG 1.9656 ["INTRACHROMOSOMAL[chr19:1.96Mb]"] REV3L--ARMT1 1 0 1.00 0.00 ONLY_REF_SPLICE REV3L^ENSG00000009413.16 chr6:111482750:- ARMT1^ENSG00000146476.11 chr6:151458328:+ YES_LDAS 0.0034 GT 1.5219 AG 1.7968 ["INTRACHROMOSOMAL[chr6:39.97Mb]"] REV3L--ANKIB1 1 0 1.00 0.00 ONLY_REF_SPLICE REV3L^ENSG00000009413.16 chr6:111482750:- ANKIB1^ENSG00000001629.10 chr7:92319330:+ NO_LDAS 0.0034 GT 1.5219 AG 1.7056 ["INTERCHROMOSOMAL[chr6--chr7]"] RETSAT--SLC25A12 1 0 1.00 0.00 ONLY_REF_SPLICE RETSAT^ENSG00000042445.14 chr2:85354336:- SLC25A12^ENSG00000115840.14 chr2:171787947:- YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["INTRACHROMOSOMAL[chr2:86.43Mb]"] REPS2--AC009509.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE REPS2^ENSG00000169891.18 chrX:17047482:+ AC009509.1^ENSG00000256377.6 chr12:27704354:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr12]"] RDH13--RUFY2 1 0 1.00 0.00 ONLY_REF_SPLICE RDH13^ENSG00000160439.16 chr19:55064296:- RUFY2^ENSG00000204130.14 chr10:68346084:- NO_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr10]"] RCOR2--DIP2C-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RCOR2^ENSG00000167771.6 chr11:63916968:- DIP2C-AS1^ENSG00000180525.13 chr10:651978:+ NO_LDAS 0.0034 GT 0.9183 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr10]"] RCL1--AC103719.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RCL1^ENSG00000120158.12 chr9:4834301:+ AC103719.1^ENSG00000254040.2 chr8:21023463:+ NO_LDAS 0.0034 GT 0.6998 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr8]"] RCC1L--TMEM53 1 0 1.00 0.00 ONLY_REF_SPLICE RCC1L^ENSG00000274523.5 chr7:75052711:- TMEM53^ENSG00000126106.14 chr1:44645464:- YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr1]"] RCAN3--NIPAL3 1 0 1.00 0.00 ONLY_REF_SPLICE RCAN3^ENSG00000117602.13 chr1:24503117:+ NIPAL3^ENSG00000001461.17 chr1:24456138:+ YES_LDAS 0.0034 GT 1.4716 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.03Mb]","LOCAL_REARRANGEMENT:+:[29375]"] RBPJ--MYO5A 1 0 1.00 0.00 ONLY_REF_SPLICE RBPJ^ENSG00000168214.21 chr4:26406270:+ MYO5A^ENSG00000197535.15 chr15:52330499:- NO_LDAS 0.0034 GT 1.3383 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr15]"] RBP5--TGM6 1 0 0.25 0.00 INCL_NON_REF_SPLICE RBP5^ENSG00000139194.8 chr12:7128288:- TGM6^ENSG00000166948.10 chr20:2397918:+ NO_LDAS 0.0008 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr20]"] RBP5--SLC4A3 1 0 0.25 0.00 INCL_NON_REF_SPLICE RBP5^ENSG00000139194.8 chr12:7128288:- SLC4A3^ENSG00000114923.17 chr2:219632340:+ NO_LDAS 0.0008 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr2]"] RBP5--RRP7BP 1 0 0.25 0.00 INCL_NON_REF_SPLICE RBP5^ENSG00000139194.8 chr12:7128288:- RRP7BP^ENSG00000182841.12 chr22:42574795:- NO_LDAS 0.0008 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr22]"] RBM41--BCL2L12 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM41^ENSG00000089682.16 chrX:107069654:- BCL2L12^ENSG00000126453.10 chr19:49673698:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr19]"] RBM12B--CYP51A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM12B^ENSG00000183808.11 chr8:93731036:- CYP51A1^ENSG00000001630.17 chr7:92131872:- NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr7]"] RBFA--SLC66A2 1 0 1.00 0.00 ONLY_REF_SPLICE RBFA^ENSG00000101546.13 chr18:80034653:+ SLC66A2^ENSG00000122490.19 chr18:79904183:- YES_LDAS 0.0034 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr18:0.08Mb]","LOCAL_INVERSION:+:-:[82732]"] RB1--FNDC3A 1 0 1.00 0.00 ONLY_REF_SPLICE RB1^ENSG00000139687.16 chr13:48307406:+ FNDC3A^ENSG00000102531.16 chr13:49075289:+ YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTRACHROMOSOMAL[chr13:0.38Mb]"] RASSF8--SSPN 1 0 1.00 0.00 ONLY_REF_SPLICE RASSF8^ENSG00000123094.15 chr12:25959148:+ SSPN^ENSG00000123096.12 chr12:26224293:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr12:0.04Mb]","NEIGHBORS[42099]"] RASSF3--OCIAD1 1 0 1.00 0.00 ONLY_REF_SPLICE RASSF3^ENSG00000153179.13 chr12:64610743:+ OCIAD1^ENSG00000109180.15 chr4:48832620:+ YES_LDAS 0.0034 GT 1.7465 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr4]"] RASGRP2--H1-0 1 0 1.00 0.00 INCL_NON_REF_SPLICE RASGRP2^ENSG00000068831.19 chr11:64743318:- H1-0^ENSG00000189060.5 chr22:37805268:+ NO_LDAS 0.0034 GT 1.3753 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr22]"] RASA2--DZIP1L 1 0 1.00 0.00 INCL_NON_REF_SPLICE RASA2^ENSG00000155903.13 chr3:141487216:+ DZIP1L^ENSG00000158163.15 chr3:138084329:- YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr3:3.37Mb]"] RARS2--TRIM9 1 0 1.00 0.00 INCL_NON_REF_SPLICE RARS2^ENSG00000146282.18 chr6:87529542:- TRIM9^ENSG00000100505.13 chr14:51095327:- NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr14]"] RAPGEF6--AL357153.2 1 0 1.00 0.00 ONLY_REF_SPLICE RAPGEF6^ENSG00000158987.22 chr5:131548047:- AL357153.2^ENSG00000257759.2 chr14:70453509:- NO_LDAS 0.0034 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr14]"] RAPGEF5--ZAN 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAPGEF5^ENSG00000136237.19 chr7:22145044:- ZAN^ENSG00000146839.19 chr7:100737021:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr7:78.38Mb]"] RAP2C--THSD7A 1 0 1.00 0.00 ONLY_REF_SPLICE RAP2C^ENSG00000123728.10 chrX:132219370:- THSD7A^ENSG00000005108.16 chr7:11636961:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr7]"] RANBP17--LINC01290 1 0 1.00 0.00 INCL_NON_REF_SPLICE RANBP17^ENSG00000204764.14 chr5:170968377:+ LINC01290^ENSG00000260468.1 chr16:10528274:- YES_LDAS 0.0034 GT 1.6402 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr16]"] RANBP10--LINC01019 1 0 1.00 0.00 INCL_NON_REF_SPLICE RANBP10^ENSG00000141084.11 chr16:67729680:- LINC01019^ENSG00000248118.2 chr5:3417774:- NO_LDAS 0.0034 GT 1.6895 AG 1.5656 ["INTERCHROMOSOMAL[chr16--chr5]"] RAMP3--STARD3NL 1 0 1.00 0.00 ONLY_REF_SPLICE RAMP3^ENSG00000122679.8 chr7:45183408:+ STARD3NL^ENSG00000010270.14 chr7:38207447:+ NO_LDAS 0.0034 GT 1.8295 AG 1.6729 ["INTRACHROMOSOMAL[chr7:6.93Mb]"] RALGAPB--TRIM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RALGAPB^ENSG00000170471.15 chr20:38488561:+ TRIM2^ENSG00000109654.16 chr4:153295220:+ NO_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr4]"] RAI14--ITCH 1 0 1.00 0.00 ONLY_REF_SPLICE RAI14^ENSG00000039560.14 chr5:34757598:+ ITCH^ENSG00000078747.16 chr20:34489266:+ NO_LDAS 0.0034 GT 1.8062 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr20]"] RAD51B--SNX13 1 0 1.00 0.00 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ SNX13^ENSG00000071189.21 chr7:17799154:- YES_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr14--chr7]"] RAD51B--CEP170P1 1 0 1.00 0.00 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ CEP170P1^ENSG00000154608.14 chr4:118493552:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] RABGGTB--TSPOAP1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RABGGTB^ENSG00000137955.16 chr1:75794990:+ TSPOAP1-AS1^ENSG00000265148.6 chr17:58415388:+ NO_LDAS 0.0034 GT 1.5656 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr17]"] RABGAP1L--SMYD3 1 0 1.00 0.00 ONLY_REF_SPLICE RABGAP1L^ENSG00000152061.23 chr1:174394145:+ SMYD3^ENSG00000185420.19 chr1:245929937:- YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr1:70.75Mb]"] RAB6C--LINC01856 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB6C^ENSG00000222014.6 chr2:129980526:+ LINC01856^ENSG00000237574.1 chr2:129946238:+ NO_LDAS 0.0034 GT 1.8323 AG 0.9183 ["INTRACHROMOSOMAL[chr2:0.03Mb]","LOCAL_REARRANGEMENT:+:[32963]"] RAB6A--PAQR9-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB6A^ENSG00000175582.20 chr11:73707420:- PAQR9-AS1^ENSG00000241570.8 chr3:142962950:+ NO_LDAS 0.0034 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr3]"] RAB3IL1--PHACTR3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB3IL1^ENSG00000167994.13 chr11:61908054:- PHACTR3^ENSG00000087495.17 chr20:59773413:+ NO_LDAS 0.0034 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr20]"] RAB3IL1--CTPS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB3IL1^ENSG00000167994.13 chr11:61906643:- CTPS1^ENSG00000171793.16 chr1:41009578:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr1]"] RAB3GAP2--RRP15 1 0 1.00 0.00 ONLY_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220272223:- RRP15^ENSG00000067533.6 chr1:218330948:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr1:1.81Mb]"] RAB3GAP2--RPS6KC1 1 0 1.00 0.00 ONLY_REF_SPLICE RAB3GAP2^ENSG00000118873.16 chr1:220272223:- RPS6KC1^ENSG00000136643.12 chr1:213230497:+ YES_LDAS 0.0034 GT 1.7819 AG 1.6729 ["INTRACHROMOSOMAL[chr1:6.87Mb]"] RAB36--SSNA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB36^ENSG00000100228.13 chr22:23145359:+ SSNA1^ENSG00000176101.12 chr9:137189122:+ NO_LDAS 0.0034 GT 1.9329 AG 1.4295 ["INTERCHROMOSOMAL[chr22--chr9]"] RAB33B--AC104187.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB33B^ENSG00000172007.7 chr4:139454306:+ AC104187.1^ENSG00000271937.1 chr3:44338529:- NO_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr3]"] RAB30-DT--RUNX2 1 0 1.00 0.00 ONLY_REF_SPLICE RAB30-DT^ENSG00000246067.8 chr11:83072702:+ RUNX2^ENSG00000124813.23 chr6:45546827:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr6]"] RAB2A--ATP6V1H 1 0 1.00 0.00 ONLY_REF_SPLICE RAB2A^ENSG00000104388.15 chr8:60517253:+ ATP6V1H^ENSG00000047249.18 chr8:53801896:- YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr8:6.67Mb]"] RAB28--PAPSS1 1 0 1.00 0.00 ONLY_REF_SPLICE RAB28^ENSG00000157869.16 chr4:13484076:- PAPSS1^ENSG00000138801.9 chr4:107687177:- YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr4:94.11Mb]"] RAB27B--SEC11C 1 0 1.00 0.00 ONLY_REF_SPLICE RAB27B^ENSG00000041353.10 chr18:54828700:+ SEC11C^ENSG00000166562.9 chr18:59149513:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr18:4.24Mb]"] PXT1--STK38 1 0 1.00 0.00 ONLY_REF_SPLICE PXT1^ENSG00000179165.11 chr6:36425914:- STK38^ENSG00000112079.9 chr6:36498486:- YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTRACHROMOSOMAL[chr6:0.05Mb]","LOCAL_REARRANGEMENT:-:[51038]"] PWWP2A--WWP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PWWP2A^ENSG00000170234.13 chr5:160093697:- WWP1^ENSG00000123124.14 chr8:86442619:+ YES_LDAS 0.0034 GC 1.8323 AG 1.6729 ["INTERCHROMOSOMAL[chr5--chr8]"] PUS10--CISD3 1 0 0.33 0.00 INCL_NON_REF_SPLICE PUS10^ENSG00000162927.14 chr2:61017379:- CISD3^ENSG00000277972.2 chr17:38735284:+ NO_LDAS 0.0011 GT 1.4256 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr17]"] PTPRQ--TOGARAM1 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRQ^ENSG00000139304.16 chr12:80635073:+ TOGARAM1^ENSG00000198718.13 chr14:45066578:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr14]"] PTPRJ--HDGFL3 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRJ^ENSG00000149177.13 chr11:47981008:+ HDGFL3^ENSG00000166503.9 chr15:83164075:- YES_LDAS 0.0034 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr15]"] PTPRC--NEK7 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRC^ENSG00000081237.20 chr1:198639341:+ NEK7^ENSG00000151414.15 chr1:198262575:+ YES_LDAS 0.0034 GT 1.8256 AG 1.3996 ["INTRACHROMOSOMAL[chr1:0.32Mb]"] PTPRC--JAK2 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRC^ENSG00000081237.20 chr1:198639341:+ JAK2^ENSG00000096968.14 chr9:5021963:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr9]"] PTPRC--CDC73 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRC^ENSG00000081237.20 chr1:198639341:+ CDC73^ENSG00000134371.14 chr1:193212065:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chr1:5.38Mb]"] PTPN9--SNUPN 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTPN9^ENSG00000169410.10 chr15:75509001:- SNUPN^ENSG00000169371.14 chr15:75605178:- YES_LDAS 0.0034 GT 1.9329 AG 1.5628 ["INTRACHROMOSOMAL[chr15:0.02Mb]","LOCAL_REARRANGEMENT:-:[18768]"] PTPN14--KCTD3 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN14^ENSG00000152104.12 chr1:214551183:- KCTD3^ENSG00000136636.13 chr1:215595356:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.01Mb]"] PTPN1--UBE2V1 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN1^ENSG00000196396.10 chr20:50510590:+ UBE2V1^ENSG00000244687.12 chr20:50084254:- NO_LDAS 0.0034 GT 1.9656 AG 1.6402 ["INTRACHROMOSOMAL[chr20:0.39Mb]"] PTPN1--SLC9A8 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN1^ENSG00000196396.10 chr20:50510590:+ SLC9A8^ENSG00000197818.12 chr20:49855438:+ YES_LDAS 0.0034 GT 1.9656 AG 1.4566 ["TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr20:0.62Mb]"] PTGR1--MPPE1 1 0 1.00 0.00 ONLY_REF_SPLICE PTGR1^ENSG00000106853.20 chr9:111592926:- MPPE1^ENSG00000154889.17 chr18:11893576:- YES_LDAS 0.0034 GT 1.8256 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr18]"] PTGIR--DGLUCY 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTGIR^ENSG00000160013.9 chr19:46622903:- DGLUCY^ENSG00000133943.21 chr14:91224684:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr14]"] PTBP2--ZNF644 1 0 1.00 0.00 ONLY_REF_SPLICE PTBP2^ENSG00000117569.19 chr1:96723594:+ ZNF644^ENSG00000122482.21 chr1:90982370:- YES_LDAS 0.0034 GT 1.8295 AG 1.2419 ["INTRACHROMOSOMAL[chr1:5.70Mb]"] PTAR1--KLF12 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTAR1^ENSG00000188647.13 chr9:69734150:- KLF12^ENSG00000118922.17 chr13:73995053:- YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr13]"] PSPC1--CDKAL1 1 0 1.00 0.00 ONLY_REF_SPLICE PSPC1^ENSG00000121390.19 chr13:19730239:- CDKAL1^ENSG00000145996.11 chr6:20846075:+ YES_LDAS 0.0034 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr6]"] PSMD7--SLPI 1 0 1.00 0.00 ONLY_REF_SPLICE PSMD7^ENSG00000103035.11 chr16:74304394:+ SLPI^ENSG00000124107.5 chr20:45252419:- NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr20]"] PSMD14--ZC3H15 1 0 1.00 0.00 ONLY_REF_SPLICE PSMD14^ENSG00000115233.12 chr2:161318873:+ ZC3H15^ENSG00000065548.18 chr2:186495233:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr2:25.07Mb]"] PSMC1P4--SLC39A6 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMC1P4^ENSG00000248781.1 chr5:56276592:- SLC39A6^ENSG00000141424.13 chr18:36126811:- NO_LDAS 0.0034 GT 1.9899 AG 1.5628 ["INTERCHROMOSOMAL[chr5--chr18]"] PSMB9--OR6K2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMB9^ENSG00000240065.8 chr6:32858505:+ OR6K2^ENSG00000196171.3 chr1:158699832:- NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] PSMA4--CHRNA5 1 0 1.00 0.00 ONLY_REF_SPLICE PSMA4^ENSG00000041357.16 chr15:78546698:+ CHRNA5^ENSG00000169684.13 chr15:78580811:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr15:0.01Mb]","NEIGHBORS[13103]"] PSMA3-AS1--RASGRF2 1 0 1.00 0.00 ONLY_REF_SPLICE PSMA3-AS1^ENSG00000257621.8 chr14:58297955:- RASGRF2^ENSG00000113319.13 chr5:81092801:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr5]"] PSEN2--RNF168 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSEN2^ENSG00000143801.18 chr1:226881943:+ RNF168^ENSG00000163961.4 chr3:196487544:- NO_LDAS 0.0034 GT 1.4295 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr3]"] PSD3--MTHFD2L 1 0 1.00 0.00 ONLY_REF_SPLICE PSD3^ENSG00000156011.17 chr8:18765449:- MTHFD2L^ENSG00000163738.18 chr4:74199794:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr4]"] PRTG--ZNF830 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRTG^ENSG00000166450.13 chr15:55673421:- ZNF830^ENSG00000198783.6 chr17:34962078:+ NO_LDAS 0.0034 GT 1.5546 AG 1.2729 ["INTERCHROMOSOMAL[chr15--chr17]"] PRR5L--LDLRAD3 1 0 1.00 0.00 ONLY_REF_SPLICE PRR5L^ENSG00000135362.14 chr11:36419303:+ LDLRAD3^ENSG00000179241.13 chr11:36081653:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.06Mb]","LOCAL_REARRANGEMENT:+:[64152]"] PRR11--CNN2 1 0 1.00 0.00 ONLY_REF_SPLICE PRR11^ENSG00000068489.13 chr17:59155805:+ CNN2^ENSG00000064666.15 chr19:1036130:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr19]"] PRPF3--KLHL14 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRPF3^ENSG00000117360.13 chr1:150332767:+ KLHL14^ENSG00000197705.10 chr18:32770282:- NO_LDAS 0.0034 GT 1.5546 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr18]"] PRNCR1--HNRNPC 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRNCR1^ENSG00000282961.1 chr8:127086988:+ HNRNPC^ENSG00000092199.18 chr14:21211422:- NO_LDAS 0.0034 GT 1.5656 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr14]"] PRMT7--NUTM2A 1 0 0.50 0.00 INCL_NON_REF_SPLICE PRMT7^ENSG00000132600.17 chr16:68355637:+ NUTM2A^ENSG00000184923.12 chr10:87228386:+ NO_LDAS 0.0017 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr16--chr10]"] PRKCQ--ARHGAP15 1 0 1.00 0.00 ONLY_REF_SPLICE PRKCQ^ENSG00000065675.15 chr10:6430810:- ARHGAP15^ENSG00000075884.14 chr2:143435601:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr2]"] PRKCH--RSU1 1 0 1.00 0.00 ONLY_REF_SPLICE PRKCH^ENSG00000027075.15 chr14:61322761:+ RSU1^ENSG00000148484.18 chr10:16695155:- YES_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr10]"] PRKCD--HMOX2 1 0 1.00 0.00 ONLY_REF_SPLICE PRKCD^ENSG00000163932.15 chr3:53165215:+ HMOX2^ENSG00000103415.12 chr16:4505484:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5058 ["INTERCHROMOSOMAL[chr3--chr16]"] PRICKLE2--KIAA0319 1 0 1.00 0.00 ONLY_REF_SPLICE PRICKLE2^ENSG00000163637.13 chr3:64198784:- KIAA0319^ENSG00000137261.15 chr6:24601208:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr6]"] PRICKLE2--GABPB2 1 0 1.00 0.00 ONLY_REF_SPLICE PRICKLE2^ENSG00000163637.13 chr3:64146830:- GABPB2^ENSG00000143458.12 chr1:151088190:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr1]"] PREX2--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE PREX2^ENSG00000046889.19 chr8:68044590:+ STAU2^ENSG00000040341.18 chr8:73688813:- YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chr8:5.18Mb]"] PRELID3A--COG7 1 0 1.00 0.00 ONLY_REF_SPLICE PRELID3A^ENSG00000141391.14 chr18:12422341:+ COG7^ENSG00000168434.13 chr16:23434718:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr16]"] PRELID2--FER 1 0 1.00 0.00 ONLY_REF_SPLICE PRELID2^ENSG00000186314.11 chr5:145796442:- FER^ENSG00000151422.13 chr5:109037422:+ YES_LDAS 0.0034 GT 1.5656 AG 1.7465 ["INTRACHROMOSOMAL[chr5:36.27Mb]"] PREB--TAF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PREB^ENSG00000138073.14 chr2:27131668:- TAF3^ENSG00000165632.8 chr10:7964801:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr10]"] PRDX6-AS1--TNFSF4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDX6-AS1^ENSG00000203739.4 chr1:173441919:- TNFSF4^ENSG00000117586.11 chr1:173207185:- YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr1:0.21Mb]"] PRDX4--MAP3K20 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDX4^ENSG00000123131.13 chrX:23686385:+ MAP3K20^ENSG00000091436.17 chr2:173225584:+ YES_LDAS 0.0034 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chrX--chr2]"] PRDM8--EIF3J 1 0 0.50 0.00 INCL_NON_REF_SPLICE PRDM8^ENSG00000152784.16 chr4:80202435:+ EIF3J^ENSG00000104131.13 chr15:44537195:+ NO_LDAS 0.0017 GT 1.1589 AG 1.4716 ["INTERCHROMOSOMAL[chr4--chr15]"] PPT1--MAPK11 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPT1^ENSG00000131238.18 chr1:40078560:- MAPK11^ENSG00000185386.15 chr22:50265327:- NO_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr22]"] PPP4R1--VAPA 1 0 1.00 0.00 ONLY_REF_SPLICE PPP4R1^ENSG00000154845.16 chr18:9614226:- VAPA^ENSG00000101558.14 chr18:9950395:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr18:0.30Mb]"] PPP4R1--RAB31 1 0 1.00 0.00 ONLY_REF_SPLICE PPP4R1^ENSG00000154845.16 chr18:9614226:- RAB31^ENSG00000168461.13 chr18:9845582:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr18:0.09Mb]","LOCAL_INVERSION:-:+:[93035]"] PPP4C--PSMG3-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP4C^ENSG00000149923.14 chr16:30084855:+ PSMG3-AS1^ENSG00000230487.8 chr7:1587473:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr7]"] PPP3CA--SEM1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3CA^ENSG00000138814.17 chr4:101195916:- SEM1^ENSG00000127922.9 chr7:96694891:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr7]"] PPP3CA--KATNBL1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3CA^ENSG00000138814.17 chr4:101346739:- KATNBL1^ENSG00000134152.11 chr15:34163690:- YES_LDAS 0.0034 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr15]"] PPP3CA--HERC3 1 0 1.00 0.00 ONLY_REF_SPLICE PPP3CA^ENSG00000138814.17 chr4:101195916:- HERC3^ENSG00000138641.18 chr4:88605795:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr4:12.31Mb]"] PPP2R2B--PRKCQ 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R2B^ENSG00000156475.19 chr5:146878002:- PRKCQ^ENSG00000065675.15 chr10:6515144:- YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr10]"] PPP2R2A--EOGT 1 0 1.00 0.00 ONLY_REF_SPLICE PPP2R2A^ENSG00000221914.11 chr8:26325427:+ EOGT^ENSG00000163378.14 chr3:68989017:- YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr3]"] PPP1R21--STON1 1 0 1.00 0.00 ONLY_REF_SPLICE PPP1R21^ENSG00000162869.16 chr2:48511468:+ STON1^ENSG00000243244.7 chr2:48529880:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr2:0.01Mb]","NEIGHBORS[13992]"] PPOX--LINC01197 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPOX^ENSG00000143224.18 chr1:161167234:+ LINC01197^ENSG00000248441.7 chr15:95256382:- NO_LDAS 0.0034 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] PPM1K-DT--DHX57 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPM1K-DT^ENSG00000246375.3 chr4:88319397:+ DHX57^ENSG00000163214.21 chr2:38863519:- NO_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr2]"] PPM1F--MEN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPM1F^ENSG00000100034.14 chr22:21920007:- MEN1^ENSG00000133895.17 chr11:64805103:- NO_LDAS 0.0034 GT 1.5546 AG 1.7465 ["INTERCHROMOSOMAL[chr22--chr11]"] PPM1B--IGHV3-29 1 0 1.00 0.00 ONLY_REF_SPLICE PPM1B^ENSG00000138032.21 chr2:44218537:+ IGHV3-29^ENSG00000270474.2 chr14:106356453:- YES_LDAS 0.0034 GT 1.4295 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr14]"] PPM1A--CATSPERB 1 0 1.00 0.00 ONLY_REF_SPLICE PPM1A^ENSG00000100614.18 chr14:60249677:+ CATSPERB^ENSG00000133962.8 chr14:91729479:- YES_LDAS 0.0034 GT 1.5219 AG 1.9899 ["INTRACHROMOSOMAL[chr14:31.28Mb]"] PPIP5K1--DRC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPIP5K1^ENSG00000168781.22 chr15:43571724:- DRC1^ENSG00000157856.12 chr2:26429724:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr2]"] PPIP5K1--CDH8 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPIP5K1^ENSG00000168781.22 chr15:43564867:- CDH8^ENSG00000150394.14 chr16:61918416:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr16]"] PPIH--ATG13 1 0 1.00 0.00 ONLY_REF_SPLICE PPIH^ENSG00000171960.12 chr1:42663543:+ ATG13^ENSG00000175224.16 chr11:46649137:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr11]"] PPARG--DUSP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPARG^ENSG00000132170.23 chr3:12417154:+ DUSP2^ENSG00000158050.5 chr2:96145374:- NO_LDAS 0.0034 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr3--chr2]"] PPA2--RPRD1A 1 0 1.00 0.00 ONLY_REF_SPLICE PPA2^ENSG00000138777.20 chr4:105396249:- RPRD1A^ENSG00000141425.18 chr18:36033837:- YES_LDAS 0.0034 GT 1.8062 AG 1.3996 ["INTERCHROMOSOMAL[chr4--chr18]"] PON1--PON3 1 0 1.00 0.00 ONLY_REF_SPLICE PON1^ENSG00000005421.9 chr7:95324402:- PON3^ENSG00000105852.11 chr7:95372338:- YES_LDAS 0.0034 GT 1.7819 AG 1.7968 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr7:0.04Mb]","LOCAL_REARRANGEMENT:-:[35340]"] POMZP3--VSIG10 1 0 0.50 0.00 ONLY_REF_SPLICE POMZP3^ENSG00000146707.14 chr7:76618183:- VSIG10^ENSG00000176834.14 chr12:118095814:- YES_LDAS 0.0017 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr12]"] POLR3H--AFAP1L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR3H^ENSG00000100413.17 chr22:41527014:- AFAP1L2^ENSG00000169129.15 chr10:114297303:- NO_LDAS 0.0034 GT 1.7232 AG 1.7465 ["INTERCHROMOSOMAL[chr22--chr10]"] POLR3D--C17orf100 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR3D^ENSG00000168495.13 chr8:22248649:+ C17orf100^ENSG00000256806.6 chr17:6652621:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5058 ["INTERCHROMOSOMAL[chr8--chr17]"] POLR3A--THAP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLR3A^ENSG00000148606.13 chr10:77975601:- THAP4^ENSG00000176946.12 chr2:241584725:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr2]"] POLR2J2--TMEM241 1 0 0.25 0.00 INCL_NON_REF_SPLICE POLR2J2^ENSG00000228049.7 chr7:102666077:- TMEM241^ENSG00000134490.14 chr18:23421444:- YES_LDAS 0.0008 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr18]"] POLD4--STAM 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLD4^ENSG00000175482.9 chr11:67353294:- STAM^ENSG00000136738.15 chr10:17644204:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr10]"] POC1B--MPHOSPH9 1 0 1.00 0.00 ONLY_REF_SPLICE POC1B^ENSG00000139323.14 chr12:89491936:- MPHOSPH9^ENSG00000051825.15 chr12:123166789:- YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTRACHROMOSOMAL[chr12:33.63Mb]"] POC1B--AC008011.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE POC1B^ENSG00000139323.14 chr12:89525120:- AC008011.2^ENSG00000257042.1 chr12:27958519:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr12:61.45Mb]"] PNPLA8--COG5 1 0 1.00 0.00 ONLY_REF_SPLICE PNPLA8^ENSG00000135241.17 chr7:108569490:- COG5^ENSG00000164597.15 chr7:107412632:- YES_LDAS 0.0034 GT 1.8295 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.91Mb]"] PNKP--GEMIN7 1 0 1.00 0.00 ONLY_REF_SPLICE PNKP^ENSG00000039650.12 chr19:49866399:- GEMIN7^ENSG00000142252.11 chr19:45090107:+ NO_LDAS 0.0034 GT 1.8323 AG 1.6402 ["INTRACHROMOSOMAL[chr19:4.77Mb]"] PMVK--MRPS33 1 0 1.00 0.00 INCL_NON_REF_SPLICE PMVK^ENSG00000163344.6 chr1:154925087:- MRPS33^ENSG00000090263.16 chr7:141006446:- YES_LDAS 0.0034 GT 1.6729 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr7]"] PMS2P1--USP33 1 0 1.00 0.00 ONLY_REF_SPLICE PMS2P1^ENSG00000078319.10 chr7:100328836:- USP33^ENSG00000077254.14 chr1:77741429:- YES_LDAS 0.0034 GT 1.4566 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr1]"] PMS2P1--AC004980.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE PMS2P1^ENSG00000078319.10 chr7:100325691:- AC004980.2^ENSG00000214243.3 chr7:76650882:- YES_LDAS 0.0017 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr7:23.67Mb]"] PLXDC1--CRY2 1 0 1.00 0.00 ONLY_REF_SPLICE PLXDC1^ENSG00000161381.14 chr17:39077913:- CRY2^ENSG00000121671.12 chr11:45862060:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr11]"] PLSCR1--RASA2 1 0 1.00 0.00 ONLY_REF_SPLICE PLSCR1^ENSG00000188313.13 chr3:146544467:- RASA2^ENSG00000155903.13 chr3:141540533:+ YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTRACHROMOSOMAL[chr3:4.90Mb]"] PLSCR1--ATF1 1 0 1.00 0.00 ONLY_REF_SPLICE PLSCR1^ENSG00000188313.13 chr3:146544467:- ATF1^ENSG00000123268.9 chr12:50780140:+ NO_LDAS 0.0034 GT 1.5656 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr12]"] PLS3--PLS1 1 0 1.00 0.00 ONLY_REF_SPLICE PLS3^ENSG00000102024.18 chrX:115646535:+ PLS1^ENSG00000120756.13 chr3:142704463:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9086 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chr3]"] PLS3--DYRK2 1 0 1.00 0.00 ONLY_REF_SPLICE PLS3^ENSG00000102024.18 chrX:115561260:+ DYRK2^ENSG00000127334.11 chr12:67657106:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr12]"] PLPPR4--ARHGAP29 1 0 1.00 0.00 ONLY_REF_SPLICE PLPPR4^ENSG00000117600.13 chr1:99288150:+ ARHGAP29^ENSG00000137962.13 chr1:94154648:- YES_LDAS 0.0034 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chr1:4.99Mb]"] PLPP2--ATP6V1C2 1 0 1.00 0.00 ONLY_REF_SPLICE PLPP2^ENSG00000141934.10 chr19:291285:- ATP6V1C2^ENSG00000143882.12 chr2:10764331:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr2]"] PLPBP--OGFOD3 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ OGFOD3^ENSG00000181396.13 chr17:82392534:- YES_LDAS 0.0034 GT 1.8892 AG 1.5219 ["INTERCHROMOSOMAL[chr8--chr17]"] PLPBP--NINJ2-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ NINJ2-AS1^ENSG00000177406.5 chr12:643959:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr12]"] PLPBP--HIGD2A 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ HIGD2A^ENSG00000146066.3 chr5:176389331:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr5]"] PLPBP--AADAT 1 0 1.00 0.00 ONLY_REF_SPLICE PLPBP^ENSG00000147471.12 chr8:37766355:+ AADAT^ENSG00000109576.14 chr4:170089736:- NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr4]"] PLOD2--MPZ 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLOD2^ENSG00000152952.12 chr3:146076082:- MPZ^ENSG00000158887.19 chr1:161304985:- NO_LDAS 0.0034 GT 1.1589 AG 1.2867 ["INTERCHROMOSOMAL[chr3--chr1]"] PLEKHS1--TMEM241 1 0 0.25 0.00 INCL_NON_REF_SPLICE PLEKHS1^ENSG00000148735.15 chr10:113782760:+ TMEM241^ENSG00000134490.14 chr18:23421444:- YES_LDAS 0.0008 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr18]"] PLEKHO2--ANKDD1A 1 0 1.00 0.00 ONLY_REF_SPLICE PLEKHO2^ENSG00000241839.10 chr15:64861575:+ ANKDD1A^ENSG00000166839.17 chr15:64926066:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr15:0.04Mb]","NEIGHBORS[43900]"] PLEKHO2--ANKDD1A 1 0 1.00 0.00 ONLY_REF_SPLICE PLEKHO2^ENSG00000241839.10 chr15:64861575:+ ANKDD1A^ENSG00000166839.17 chr15:64914033:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr15:0.04Mb]","NEIGHBORS[43900]"] PLEKHG7--ODF2L 1 0 1.00 0.00 ONLY_REF_SPLICE PLEKHG7^ENSG00000187510.10 chr12:92732273:+ ODF2L^ENSG00000122417.15 chr1:86385590:- YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr1]"] PLEKHG7--C1GALT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLEKHG7^ENSG00000187510.10 chr12:92754264:+ C1GALT1^ENSG00000106392.11 chr7:7246785:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr7]"] PLCL1--PDCD6IP 1 0 1.00 0.00 ONLY_REF_SPLICE PLCL1^ENSG00000115896.16 chr2:197805339:+ PDCD6IP^ENSG00000170248.15 chr3:33821955:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr3]"] PLCH1--SGPL1 1 0 1.00 0.00 ONLY_REF_SPLICE PLCH1^ENSG00000114805.18 chr3:155704146:- SGPL1^ENSG00000166224.17 chr10:70844473:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr10]"] PLBD1--FAM153B 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLBD1^ENSG00000121316.11 chr12:14511313:- FAM153B^ENSG00000182230.12 chr5:176105980:+ YES_LDAS 0.0034 GC 1.8892 AG 1.7232 ["INTERCHROMOSOMAL[chr12--chr5]"] PLA2R1--CEP170 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLA2R1^ENSG00000153246.13 chr2:159940378:- CEP170^ENSG00000143702.16 chr1:243225321:- YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr1]"] PLA2G4F--FAM189A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLA2G4F^ENSG00000168907.13 chr15:42150100:- FAM189A1^ENSG00000104059.4 chr15:29128829:- NO_LDAS 0.0034 GT 1.5058 AG 1.8062 ["INTRACHROMOSOMAL[chr15:12.57Mb]"] PKIA--AC083837.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PKIA^ENSG00000171033.13 chr8:78516468:+ AC083837.1^ENSG00000285744.1 chr8:78805212:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.20Mb]"] PKHD1--SUPT3H 1 0 1.00 0.00 ONLY_REF_SPLICE PKHD1^ENSG00000170927.15 chr6:52010309:- SUPT3H^ENSG00000196284.17 chr6:44932763:- YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr6:6.24Mb]"] PKD1P1--TMPRSS5 1 0 0.33 0.00 ONLY_REF_SPLICE PKD1P1^ENSG00000244257.5 chr16:16310562:+ TMPRSS5^ENSG00000166682.13 chr11:113688274:- YES_LDAS 0.0011 GT 1.7819 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr11]"] PKD1P1--AC138932.3 1 0 0.17 0.00 INCL_NON_REF_SPLICE PKD1P1^ENSG00000244257.5 chr16:16310562:+ AC138932.3^ENSG00000273804.1 chr16:14953121:- NO_LDAS 0.0006 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr16:1.36Mb]"] PISD--ZFAND2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE PISD^ENSG00000241878.11 chr22:31619122:- ZFAND2B^ENSG00000158552.13 chr2:219208426:+ YES_LDAS 0.0034 GT 1.7968 AG 1.6895 ["INTERCHROMOSOMAL[chr22--chr2]"] PIP4P2--CEP57 1 0 1.00 0.00 ONLY_REF_SPLICE PIP4P2^ENSG00000155099.8 chr8:91040644:- CEP57^ENSG00000166037.11 chr11:95827786:+ YES_LDAS 0.0034 GT 1.5656 AG 1.7968 ["INTERCHROMOSOMAL[chr8--chr11]"] PINX1--RP1L1 1 0 1.00 0.00 ONLY_REF_SPLICE PINX1^ENSG00000254093.9 chr8:10826152:- RP1L1^ENSG00000183638.6 chr8:10623220:- YES_LDAS 0.0034 GT 1.7232 AG 1.4566 ["INTRACHROMOSOMAL[chr8:0.05Mb]","NEIGHBORS[52774]"] PIN1P1--PTOV1-AS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIN1P1^ENSG00000229359.2 chr1:69919783:+ PTOV1-AS2^ENSG00000269352.1 chr19:49857033:- NO_LDAS 0.0034 AT 1.2419 AC 1.7819 ["INTERCHROMOSOMAL[chr1--chr19]"] PIH1D2--ABCA5 1 0 1.00 0.00 ONLY_REF_SPLICE PIH1D2^ENSG00000150773.12 chr11:112072739:- ABCA5^ENSG00000154265.16 chr17:69256283:- NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr17]"] PIH1D1--WASF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIH1D1^ENSG00000104872.11 chr19:49447338:- WASF3^ENSG00000132970.14 chr13:26687521:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr13]"] PIGY--ADNP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIGY^ENSG00000255072.2 chr4:88523642:- ADNP2^ENSG00000101544.9 chr18:80137353:+ YES_LDAS 0.0034 GT 1.3996 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr18]"] PIGW--THUMPD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PIGW^ENSG00000277161.2 chr17:36537195:+ THUMPD2^ENSG00000138050.15 chr2:39768501:- YES_LDAS 0.0034 GT 1.6895 AG 1.4295 ["INTERCHROMOSOMAL[chr17--chr2]"] PIGV--TMEM134 1 0 0.33 0.00 INCL_NON_REF_SPLICE PIGV^ENSG00000060642.11 chr1:26797600:+ TMEM134^ENSG00000172663.9 chr11:67465026:- NO_LDAS 0.0011 GT 1.5219 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr11]"] PIGV--LINC02532 1 0 0.33 0.00 INCL_NON_REF_SPLICE PIGV^ENSG00000060642.11 chr1:26797600:+ LINC02532^ENSG00000235142.10 chr6:106724870:- NO_LDAS 0.0011 GT 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] PICK1--ZNF17 1 0 0.50 0.00 INCL_NON_REF_SPLICE PICK1^ENSG00000100151.16 chr22:38070891:+ ZNF17^ENSG00000186272.13 chr19:57419796:+ NO_LDAS 0.0017 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr19]"] PHYH--ARL13B 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHYH^ENSG00000107537.14 chr10:13278052:- ARL13B^ENSG00000169379.17 chr3:94036514:+ NO_LDAS 0.0034 GT 1.8892 AG 1.3710 ["INTERCHROMOSOMAL[chr10--chr3]"] PHF8--RCBTB1 1 0 1.00 0.00 ONLY_REF_SPLICE PHF8^ENSG00000172943.20 chrX:54042631:- RCBTB1^ENSG00000136144.12 chr13:49544863:- YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr13]"] PHF5A--C2CD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PHF5A^ENSG00000100410.8 chr22:41468124:- C2CD2^ENSG00000157617.17 chr21:41901114:- NO_LDAS 0.0034 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr22--chr21]"] PHBP12--PURB 1 0 0.12 0.00 INCL_NON_REF_SPLICE PHBP12^ENSG00000230585.2 chr1:50780960:+ PURB^ENSG00000146676.10 chr7:44884490:- YES_LDAS 0.0004 GT 1.5219 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr7]"] PGR-AS1--DYNC2H1 1 0 1.00 0.00 ONLY_REF_SPLICE PGR-AS1^ENSG00000282728.1 chr11:101159255:+ DYNC2H1^ENSG00000187240.16 chr11:103280348:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr11:1.90Mb]"] PEG3--ZNF805 1 0 1.00 0.00 ONLY_REF_SPLICE PEG3^ENSG00000198300.14 chr19:56836018:- ZNF805^ENSG00000204524.7 chr19:57243923:+ YES_LDAS 0.0034 GT 1.6729 AG 1.7465 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:0.40Mb]"] PEDS1--SRGN 1 0 1.00 0.00 INCL_NON_REF_SPLICE PEDS1^ENSG00000240849.11 chr20:50124634:- SRGN^ENSG00000122862.5 chr10:69097102:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr10]"] PDZD8--TBCB 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDZD8^ENSG00000165650.12 chr10:117374769:- TBCB^ENSG00000105254.12 chr19:36120749:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr19]"] PDSS1--ABI1 1 0 1.00 0.00 ONLY_REF_SPLICE PDSS1^ENSG00000148459.16 chr10:26742577:+ ABI1^ENSG00000136754.18 chr10:26770345:- YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr10:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[205]"] PDLIM5--UNC5C 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDLIM5^ENSG00000163110.15 chr4:94455382:+ UNC5C^ENSG00000182168.15 chr4:95301749:- YES_LDAS 0.0034 GT 1.8256 AG 1.8256 ["INTRACHROMOSOMAL[chr4:0.49Mb]"] PDLIM5--FGF2 1 0 1.00 0.00 ONLY_REF_SPLICE PDLIM5^ENSG00000163110.15 chr4:94523875:+ FGF2^ENSG00000138685.17 chr4:122876321:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr4:28.16Mb]"] PDLIM1P4--NAA10 1 0 0.50 0.00 INCL_NON_REF_SPLICE PDLIM1P4^ENSG00000249274.1 chr3:98782261:+ NAA10^ENSG00000102030.16 chrX:153930047:- NO_LDAS 0.0017 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chrX]"] PDK2--LMLN 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDK2^ENSG00000005882.12 chr17:50095560:+ LMLN^ENSG00000185621.11 chr3:197980326:+ NO_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr3]"] PDIA5--KLHL11 1 0 0.50 0.00 INCL_NON_REF_SPLICE PDIA5^ENSG00000065485.20 chr3:123146184:+ KLHL11^ENSG00000178502.6 chr17:41854260:- NO_LDAS 0.0017 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"] PDE7B--TIAM1 1 0 1.00 0.00 ONLY_REF_SPLICE PDE7B^ENSG00000171408.14 chr6:135947524:+ TIAM1^ENSG00000156299.13 chr21:31130948:- YES_LDAS 0.0034 GT 1.7056 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr21]"] PDE5A--USP53 1 0 1.00 0.00 ONLY_REF_SPLICE PDE5A^ENSG00000138735.16 chr4:119525549:- USP53^ENSG00000145390.11 chr4:119245337:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr4:0.20Mb]"] PDE3B--NAIPP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDE3B^ENSG00000152270.9 chr11:14789242:+ NAIPP1^ENSG00000250687.6 chr5:70479190:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr11--chr5]"] PDE3A--AC024901.1 1 0 1.00 0.00 ONLY_REF_SPLICE PDE3A^ENSG00000172572.7 chr12:20621411:+ AC024901.1^ENSG00000255910.2 chr12:20008645:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9899 ["INTRACHROMOSOMAL[chr12:0.36Mb]"] PCMTD2--ZSCAN9 1 0 1.00 0.00 ONLY_REF_SPLICE PCMTD2^ENSG00000203880.12 chr20:64255870:+ ZSCAN9^ENSG00000137185.13 chr6:28232562:+ NO_LDAS 0.0034 GT 1.6895 AG 1.7232 ["INTERCHROMOSOMAL[chr20--chr6]"] PCMTD2--WRAP53 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCMTD2^ENSG00000203880.12 chr20:64273607:+ WRAP53^ENSG00000141499.17 chr17:7686554:+ NO_LDAS 0.0034 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr20--chr17]"] PCMTD2--PLN 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCMTD2^ENSG00000203880.12 chr20:64265429:+ PLN^ENSG00000198523.6 chr6:118560837:+ NO_LDAS 0.0034 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr20--chr6]"] PCMTD1--STK3 1 0 1.00 0.00 ONLY_REF_SPLICE PCMTD1^ENSG00000168300.14 chr8:51898930:- STK3^ENSG00000104375.17 chr8:98548161:- YES_LDAS 0.0034 GT 1.6402 AG 1.7819 ["INTRACHROMOSOMAL[chr8:46.47Mb]"] PCMT1--LATS1 1 0 1.00 0.00 ONLY_REF_SPLICE PCMT1^ENSG00000120265.18 chr6:149749956:+ LATS1^ENSG00000131023.13 chr6:149702266:- YES_LDAS 0.0034 GT 1.7465 AG 1.2729 ["Klijn_CellLines","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.03Mb]","LOCAL_INVERSION:+:-:[31338]"] PCGF6--C10orf99 1 0 0.50 0.00 INCL_NON_REF_SPLICE PCGF6^ENSG00000156374.16 chr10:103350983:- C10orf99^ENSG00000188373.5 chr10:84184831:+ NO_LDAS 0.0017 GT 1.2419 AG 1.2310 ["INTRACHROMOSOMAL[chr10:19.12Mb]"] PCF11--SELENOP 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCF11^ENSG00000165494.11 chr11:83157625:+ SELENOP^ENSG00000250722.6 chr5:42805102:- NO_LDAS 0.0034 GC 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr5]"] PCED1A--RNPC3 1 0 1.00 0.00 ONLY_REF_SPLICE PCED1A^ENSG00000132635.17 chr20:2839192:- RNPC3^ENSG00000185946.16 chr1:103555034:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7232 ["INTERCHROMOSOMAL[chr20--chr1]"] PCDHGC3--KRR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCDHGC3^ENSG00000240184.7 chr5:141478093:+ KRR1^ENSG00000111615.14 chr12:75496347:- NO_LDAS 0.0034 GC 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr12]"] PCDH7--LINC02497 1 0 1.00 0.00 ONLY_REF_SPLICE PCDH7^ENSG00000169851.15 chr4:30920369:+ LINC02497^ENSG00000251182.2 chr4:31194449:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.02Mb]","NEIGHBORS[24208]"] PCDH12--CLN6 1 0 0.50 0.00 INCL_NON_REF_SPLICE PCDH12^ENSG00000113555.6 chr5:141945319:- CLN6^ENSG00000128973.13 chr15:68213884:- NO_LDAS 0.0017 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr15]"] PCDH12--AL138767.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCDH12^ENSG00000113555.6 chr5:141945391:- AL138767.1^ENSG00000196566.2 chr10:87659888:- NO_LDAS 0.0034 GT 1.5850 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr10]"] PCDH12--AC008763.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE PCDH12^ENSG00000113555.6 chr5:141945319:- AC008763.1^ENSG00000268204.1 chr19:7636720:- NO_LDAS 0.0017 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr19]"] PCCB--STAG1 1 0 1.00 0.00 ONLY_REF_SPLICE PCCB^ENSG00000114054.14 chr3:136329984:+ STAG1^ENSG00000118007.13 chr3:136338450:- YES_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr3:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1660]"] PCCB--MFN1 1 0 1.00 0.00 ONLY_REF_SPLICE PCCB^ENSG00000114054.14 chr3:136262065:+ MFN1^ENSG00000171109.19 chr3:179362358:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr3:43.01Mb]"] PCCA--MYH16 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCCA^ENSG00000175198.17 chr13:100209463:+ MYH16^ENSG00000002079.14 chr7:99294043:+ NO_LDAS 0.0034 GT 1.7819 AG 1.4295 ["INTERCHROMOSOMAL[chr13--chr7]"] PCARE--TTC14 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCARE^ENSG00000179270.7 chr2:29061751:- TTC14^ENSG00000163728.11 chr3:180607648:+ NO_LDAS 0.0034 GT 1.2310 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr3]"] PBX2--ZNF347 1 0 0.25 0.00 INCL_NON_REF_SPLICE PBX2^ENSG00000204304.12 chr6:32188723:- ZNF347^ENSG00000197937.13 chr19:53141070:- NO_LDAS 0.0008 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr19]"] PBX2--ZNF347 1 0 0.25 0.00 INCL_NON_REF_SPLICE PBX2^ENSG00000204304.12 chr6:32188723:- ZNF347^ENSG00000197937.13 chr19:53140566:- NO_LDAS 0.0008 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr19]"] PAX8-AS1--RNF146 1 0 0.50 0.00 INCL_NON_REF_SPLICE PAX8-AS1^ENSG00000189223.15 chr2:113265487:+ RNF146^ENSG00000118518.16 chr6:127280251:+ NO_LDAS 0.0017 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr6]"] PAWR--MELK 1 0 1.00 0.00 ONLY_REF_SPLICE PAWR^ENSG00000177425.11 chr12:79689729:- MELK^ENSG00000165304.8 chr9:36606830:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr9]"] PARG--AAGAB 1 0 0.50 0.00 ONLY_REF_SPLICE PARG^ENSG00000227345.9 chr10:49857306:- AAGAB^ENSG00000103591.13 chr15:67209544:- YES_LDAS 0.0017 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr15]"] PARD6G--DECR2 1 0 0.33 0.00 INCL_NON_REF_SPLICE PARD6G^ENSG00000178184.16 chr18:80159237:- DECR2^ENSG00000242612.7 chr16:406736:+ YES_LDAS 0.0011 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr18--chr16]"] PAPSS1--HNF4G 1 0 1.00 0.00 INCL_NON_REF_SPLICE PAPSS1^ENSG00000138801.9 chr4:107654732:- HNF4G^ENSG00000164749.13 chr8:75547662:+ NO_LDAS 0.0034 GT 1.9086 AG 1.5329 ["INTERCHROMOSOMAL[chr4--chr8]"] PAN3--SUPT20H 1 0 1.00 0.00 ONLY_REF_SPLICE PAN3^ENSG00000152520.14 chr13:28177935:+ SUPT20H^ENSG00000102710.20 chr13:37051583:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr13:8.71Mb]"] PAN2--HLA-DOA 1 0 1.00 0.00 ONLY_REF_SPLICE PAN2^ENSG00000135473.15 chr12:56323062:- HLA-DOA^ENSG00000204252.14 chr6:33006841:- YES_LDAS 0.0034 GT 1.6402 AG 1.9219 ["INTERCHROMOSOMAL[chr12--chr6]"] PAK2--USP48 1 0 1.00 0.00 ONLY_REF_SPLICE PAK2^ENSG00000180370.10 chr3:196740157:+ USP48^ENSG00000090686.16 chr1:21724095:- YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr1]"] PAK2--AC091730.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PAK2^ENSG00000180370.10 chr3:196807914:+ AC091730.1^ENSG00000234686.1 chr7:49230176:+ NO_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr7]"] PAIP2--PPP2CA 1 0 1.00 0.00 ONLY_REF_SPLICE PAIP2^ENSG00000120727.13 chr5:139341980:+ PPP2CA^ENSG00000113575.10 chr5:134206131:- YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTRACHROMOSOMAL[chr5:5.12Mb]"] PACC1--CPT1C 1 0 0.50 0.00 INCL_NON_REF_SPLICE PACC1^ENSG00000065600.13 chr1:212410498:- CPT1C^ENSG00000169169.15 chr19:49690919:+ NO_LDAS 0.0017 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr19]"] PABPN1--AL049564.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PABPN1^ENSG00000100836.10 chr14:23321805:+ AL049564.1^ENSG00000233710.1 chrX:67533446:+ NO_LDAS 0.0034 GC 1.3996 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chrX]"] P4HA2--ACSL6 1 0 1.00 0.00 ONLY_REF_SPLICE P4HA2^ENSG00000072682.20 chr5:132194926:- ACSL6^ENSG00000164398.15 chr5:131994251:- NO_LDAS 0.0034 GT 1.7232 AG 1.8323 ["INTRACHROMOSOMAL[chr5:0.18Mb]"] OXR1--LINC01425 1 0 1.00 0.00 ONLY_REF_SPLICE OXR1^ENSG00000164830.19 chr8:106679292:+ LINC01425^ENSG00000233997.5 chr21:21748395:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr21]"] OXNAD1--WDR48 1 0 1.00 0.00 ONLY_REF_SPLICE OXNAD1^ENSG00000154814.14 chr3:16303592:+ WDR48^ENSG00000114742.14 chr3:39063050:+ YES_LDAS 0.0034 GT 1.0530 AG 1.6049 ["INTRACHROMOSOMAL[chr3:22.70Mb]"] OVCH1-AS1--RNF167 1 0 1.00 0.00 INCL_NON_REF_SPLICE OVCH1-AS1^ENSG00000257599.3 chr12:29393375:+ RNF167^ENSG00000108523.16 chr17:4943375:+ NO_LDAS 0.0034 GC 1.2366 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr17]"] OSTM1--MBOAT1 1 0 1.00 0.00 ONLY_REF_SPLICE OSTM1^ENSG00000081087.15 chr6:108074250:- MBOAT1^ENSG00000172197.11 chr6:20152769:- NO_LDAS 0.0034 GT 1.3996 AG 1.5058 ["INTRACHROMOSOMAL[chr6:87.83Mb]"] OSMR-AS1--RICTOR 1 0 1.00 0.00 ONLY_REF_SPLICE OSMR-AS1^ENSG00000249740.3 chr5:38845668:- RICTOR^ENSG00000164327.13 chr5:39021136:- YES_LDAS 0.0034 GT 1.5656 AG 1.8256 ["INTRACHROMOSOMAL[chr5:0.09Mb]","LOCAL_REARRANGEMENT:-:[92091]"] OSER1--STK4 1 0 1.00 0.00 ONLY_REF_SPLICE OSER1^ENSG00000132823.11 chr20:44210696:- STK4^ENSG00000101109.12 chr20:45075018:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr20:0.76Mb]"] OSER1--CBX3 1 0 1.00 0.00 ONLY_REF_SPLICE OSER1^ENSG00000132823.11 chr20:44202961:- CBX3^ENSG00000122565.19 chr7:26206368:+ YES_LDAS 0.0034 GT 1.8892 AG 1.3753 ["INTERCHROMOSOMAL[chr20--chr7]"] OSBPL6--AGPS 1 0 1.00 0.00 ONLY_REF_SPLICE OSBPL6^ENSG00000079156.17 chr2:178194674:+ AGPS^ENSG00000018510.18 chr2:177434327:+ YES_LDAS 0.0034 GT 1.5546 AG 1.9329 ["INTRACHROMOSOMAL[chr2:0.63Mb]"] ORM1--CADPS 1 0 1.00 0.00 INCL_NON_REF_SPLICE ORM1^ENSG00000229314.5 chr9:114325121:+ CADPS^ENSG00000163618.18 chr3:62650876:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr3]"] ORC5--TNIK 1 0 1.00 0.00 ONLY_REF_SPLICE ORC5^ENSG00000164815.11 chr7:104161072:- TNIK^ENSG00000154310.17 chr3:171228221:- YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr3]"] OR8J1--OSBPL9 1 0 1.00 0.00 INCL_NON_REF_SPLICE OR8J1^ENSG00000172487.4 chr11:56360864:+ OSBPL9^ENSG00000117859.19 chr1:51750145:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr1]"] OR5AK2--AL136295.17 1 0 1.00 0.00 INCL_NON_REF_SPLICE OR5AK2^ENSG00000181273.2 chr11:56988978:+ AL136295.17^ENSG00000287765.1 chr14:24189460:+ NO_LDAS 0.0034 GT 1.9656 AG 0.9183 ["INTERCHROMOSOMAL[chr11--chr14]"] OPRM1--L34079.3 1 0 0.33 0.00 INCL_NON_REF_SPLICE OPRM1^ENSG00000112038.18 chr6:154121388:+ L34079.3^ENSG00000269583.1 chr19:43575412:+ NO_LDAS 0.0011 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr19]"] OLR1--AC090510.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE OLR1^ENSG00000173391.9 chr12:10159851:- AC090510.2^ENSG00000274403.1 chr15:42727176:+ NO_LDAS 0.0034 GT 0.7219 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr15]"] OLFML2A--KIFBP 1 0 1.00 0.00 ONLY_REF_SPLICE OLFML2A^ENSG00000185585.20 chr9:124795131:+ KIFBP^ENSG00000198954.9 chr10:69000424:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr10]"] OGG1--RPUSD3 1 0 1.00 0.00 ONLY_REF_SPLICE OGG1^ENSG00000114026.22 chr3:9750423:+ RPUSD3^ENSG00000156990.14 chr3:9840805:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.05Mb]","LOCAL_INVERSION:+:-:[49630]"] OGG1--BRPF1 1 0 1.00 0.00 ONLY_REF_SPLICE OGG1^ENSG00000114026.22 chr3:9751949:+ BRPF1^ENSG00000156983.16 chr3:9741308:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8256 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:+:[1929]"] OGFOD2--C11orf80 1 0 1.00 0.00 ONLY_REF_SPLICE OGFOD2^ENSG00000111325.16 chr12:122976970:+ C11orf80^ENSG00000173715.18 chr11:66816053:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr11]"] OFD1P3Y--SRGAP2C 1 0 1.00 0.00 INCL_NON_REF_SPLICE OFD1P3Y^ENSG00000231988.1 chrY:9036530:+ SRGAP2C^ENSG00000171943.12 chr1:121374833:+ NO_LDAS 0.0034 GT 1.1589 AG 1.8062 ["INTERCHROMOSOMAL[chrY--chr1]"] OFD1--AL359715.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE OFD1^ENSG00000046651.15 chrX:13735346:+ AL359715.1^ENSG00000233967.7 chr6:80463675:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chr6]"] OCRL--LZTR1 1 0 1.00 0.00 ONLY_REF_SPLICE OCRL^ENSG00000122126.17 chrX:129588263:+ LZTR1^ENSG00000099949.21 chr22:20996696:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chrX--chr22]"] OCIAD2--TECPR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE OCIAD2^ENSG00000145247.12 chr4:48892772:- TECPR2^ENSG00000196663.16 chr14:102497665:+ NO_LDAS 0.0034 GT 1.8323 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr14]"] OCIAD2--OCIAD1 1 0 1.00 0.00 ONLY_REF_SPLICE OCIAD2^ENSG00000145247.12 chr4:48904484:- OCIAD1^ENSG00000109180.15 chr4:48833401:+ YES_LDAS 0.0034 GT 1.5219 AG 1.9899 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr4:0.02Mb]","LOCAL_INVERSION:-:+:[23202]"] NYAP1--NEDD4 1 0 1.00 0.00 ONLY_REF_SPLICE NYAP1^ENSG00000166924.9 chr7:100491095:+ NEDD4^ENSG00000069869.17 chr15:55834286:- NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr15]"] NXPE3--FXR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NXPE3^ENSG00000144815.16 chr3:101821750:+ FXR1^ENSG00000114416.18 chr3:180933334:+ YES_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr3:79.04Mb]"] NUP50-DT--NFE2L2 1 0 1.00 0.00 ONLY_REF_SPLICE NUP50-DT^ENSG00000226328.7 chr22:45138824:- NFE2L2^ENSG00000116044.16 chr2:177234271:- YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr22--chr2]"] NUP210--DAZ1 1 0 0.25 0.00 ONLY_REF_SPLICE NUP210^ENSG00000132182.12 chr3:13351879:- DAZ1^ENSG00000188120.15 chrY:23135273:- YES_LDAS 0.0008 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chrY]"] NUDT16L1--CCDC71 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUDT16L1^ENSG00000168101.14 chr16:4695157:+ CCDC71^ENSG00000177352.10 chr3:49164121:- NO_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr3]"] NUDCD1--AASDH 1 0 1.00 0.00 ONLY_REF_SPLICE NUDCD1^ENSG00000120526.12 chr8:109333893:- AASDH^ENSG00000157426.14 chr4:56338791:- YES_LDAS 0.0034 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr4]"] NTPCR--PCNX2 1 0 1.00 0.00 ONLY_REF_SPLICE NTPCR^ENSG00000135778.12 chr1:232950744:+ PCNX2^ENSG00000135749.19 chr1:233236980:- YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[447]"] NT5C3A--BBS9 1 0 1.00 0.00 ONLY_REF_SPLICE NT5C3A^ENSG00000122643.22 chr7:33062568:- BBS9^ENSG00000122507.21 chr7:33533954:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr7:0.05Mb]","LOCAL_INVERSION:-:+:[46760]"] NSUN5P2--CORO6 1 0 1.00 0.00 INCL_NON_REF_SPLICE NSUN5P2^ENSG00000106133.18 chr7:72948528:- CORO6^ENSG00000167549.18 chr17:29616776:- NO_LDAS 0.0034 GC 0.9183 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chr17]"] NSUN2--YTHDC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NSUN2^ENSG00000037474.15 chr5:6610955:- YTHDC2^ENSG00000047188.16 chr5:113565959:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr5:106.88Mb]"] NRG3--SLU7 1 0 1.00 0.00 INCL_NON_REF_SPLICE NRG3^ENSG00000185737.13 chr10:81875544:+ SLU7^ENSG00000164609.10 chr5:160402889:- YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr5]"] NRG3--SGMS1 1 0 1.00 0.00 ONLY_REF_SPLICE NRG3^ENSG00000185737.13 chr10:82358868:+ SGMS1^ENSG00000198964.14 chr10:50327322:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr10:31.25Mb]"] NRDC--ZNF511 1 0 1.00 0.00 ONLY_REF_SPLICE NRDC^ENSG00000078618.22 chr1:51878275:- ZNF511^ENSG00000198546.15 chr10:133312788:+ YES_LDAS 0.0034 GT 1.6895 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr10]"] NR3C2--AC002460.2 1 0 1.00 0.00 ONLY_REF_SPLICE NR3C2^ENSG00000151623.15 chr4:148435104:- AC002460.2^ENSG00000287292.1 chr4:149023304:+ NO_LDAS 0.0034 GT 1.6729 AG 1.7819 ["INTRACHROMOSOMAL[chr4:0.00Mb]","LOCAL_INVERSION:-:+:[1005]"] NR3C1--CADPS2 1 0 1.00 0.00 ONLY_REF_SPLICE NR3C1^ENSG00000113580.15 chr5:143295460:- CADPS2^ENSG00000081803.16 chr7:122663569:- YES_LDAS 0.0034 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr7]"] NPTN-IT1--SRF 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPTN-IT1^ENSG00000281183.1 chr15:73568526:- SRF^ENSG00000112658.8 chr6:43178294:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr6]"] NPM1P39--AL359771.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPM1P39^ENSG00000225159.1 chr1:27207394:+ AL359771.1^ENSG00000237445.2 chr1:13657315:- NO_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTRACHROMOSOMAL[chr1:13.55Mb]"] NPM1P34--PPFIA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPM1P34^ENSG00000232054.1 chrX:124280950:+ PPFIA3^ENSG00000177380.14 chr19:49136733:+ NO_LDAS 0.0034 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chrX--chr19]"] NPM1P18--NPM1P11 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPM1P18^ENSG00000225739.1 chr7:36819160:+ NPM1P11^ENSG00000226827.1 chr7:11258234:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr7:25.56Mb]"] NPIPA1--AC215522.2 1 0 0.20 0.00 ONLY_REF_SPLICE NPIPA1^ENSG00000183426.17 chr16:14937650:+ AC215522.2^ENSG00000282572.2 chr7:31606:- NO_LDAS 0.0007 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr7]"] NPIPA1--ABCB11 1 0 0.20 0.00 ONLY_REF_SPLICE NPIPA1^ENSG00000183426.17 chr16:14937650:+ ABCB11^ENSG00000073734.10 chr2:168932940:- NO_LDAS 0.0007 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr2]"] NPHP1--LINC02301 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPHP1^ENSG00000144061.14 chr2:110161603:- LINC02301^ENSG00000258743.6 chr14:82746369:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr14]"] NOS1AP--ZNF793-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NOS1AP^ENSG00000198929.13 chr1:162070282:+ ZNF793-AS1^ENSG00000266916.7 chr19:37497358:- NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] NOCT--HULC 1 0 1.00 0.00 ONLY_REF_SPLICE NOCT^ENSG00000151014.6 chr4:139016171:+ HULC^ENSG00000285219.2 chr6:8959856:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr4--chr6]"] NMNAT1--DECR2 1 0 0.33 0.00 INCL_NON_REF_SPLICE NMNAT1^ENSG00000173614.14 chr1:9983423:+ DECR2^ENSG00000242612.7 chr16:406736:+ YES_LDAS 0.0011 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr16]"] NME3--FBXO38 1 0 1.00 0.00 INCL_NON_REF_SPLICE NME3^ENSG00000103024.7 chr16:1770742:- FBXO38^ENSG00000145868.17 chr5:148424051:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr5]"] NKRF--FAM122C 1 0 1.00 0.00 ONLY_REF_SPLICE NKRF^ENSG00000186416.17 chrX:119605731:- FAM122C^ENSG00000156500.15 chrX:134845205:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8323 ["INTRACHROMOSOMAL[chrX:15.19Mb]"] NKAPP1--OGFOD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NKAPP1^ENSG00000233382.7 chrX:120244764:- OGFOD3^ENSG00000181396.13 chr17:82415579:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr17]"] NKAPP1--KLHL13 1 0 1.00 0.00 ONLY_REF_SPLICE NKAPP1^ENSG00000233382.7 chrX:120244764:- KLHL13^ENSG00000003096.14 chrX:117945575:- YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chrX:2.00Mb]"] NIPSNAP1--AC018442.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NIPSNAP1^ENSG00000184117.12 chr22:29570405:- AC018442.1^ENSG00000235683.1 chr8:99697207:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr8]"] NIN--DMAC2L 1 0 1.00 0.00 ONLY_REF_SPLICE NIN^ENSG00000100503.26 chr14:50830464:- DMAC2L^ENSG00000125375.17 chr14:50321483:+ YES_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.38Mb]"] NIBAN1--TMX4 1 0 1.00 0.00 ONLY_REF_SPLICE NIBAN1^ENSG00000135842.17 chr1:184884633:- TMX4^ENSG00000125827.9 chr20:8010315:- NO_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr20]"] NGEF--NOL8 1 0 1.00 0.00 INCL_NON_REF_SPLICE NGEF^ENSG00000066248.15 chr2:232884020:- NOL8^ENSG00000198000.12 chr9:92310223:- NO_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr9]"] NFASC--LLCFC1 1 0 0.50 0.00 INCL_NON_REF_SPLICE NFASC^ENSG00000163531.16 chr1:204979374:+ LLCFC1^ENSG00000165131.8 chr7:142940432:+ NO_LDAS 0.0017 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr7]"] NEU4--TNNI2 1 0 0.33 0.00 INCL_NON_REF_SPLICE NEU4^ENSG00000204099.12 chr2:241809128:+ TNNI2^ENSG00000130598.16 chr11:1840414:+ NO_LDAS 0.0011 GT 1.1589 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr11]"] NEK7--PTPRC 1 0 1.00 0.00 ONLY_REF_SPLICE NEK7^ENSG00000151414.15 chr1:198264235:+ PTPRC^ENSG00000081237.20 chr1:198703298:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.32Mb]"] NEGR1--DCLK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEGR1^ENSG00000172260.15 chr1:71776167:- DCLK3^ENSG00000163673.7 chr3:36729795:- NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr3]"] NEFL--AC023509.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEFL^ENSG00000277586.4 chr8:24955725:- AC023509.4^ENSG00000273658.1 chr12:53461017:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr8--chr12]"] NDUFS4--NR2F1-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFS4^ENSG00000164258.12 chr5:53560760:+ NR2F1-AS1^ENSG00000237187.9 chr5:93411509:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr5:39.68Mb]"] NDUFAF7--ZNF43 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDUFAF7^ENSG00000003509.16 chr2:37241791:+ ZNF43^ENSG00000198521.12 chr19:21806938:- NO_LDAS 0.0034 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr19]"] NDUFAF2--ZFR 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFAF2^ENSG00000164182.12 chr5:60945382:+ ZFR^ENSG00000056097.16 chr5:32415187:- YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr5:28.50Mb]"] NDUFA12--UBXN10 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDUFA12^ENSG00000184752.13 chr12:95002806:- UBXN10^ENSG00000162543.6 chr1:20190927:+ NO_LDAS 0.0034 GT 1.7968 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr1]"] NDRG4--AC068473.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDRG4^ENSG00000103034.14 chr16:58464467:+ AC068473.3^ENSG00000267287.1 chr18:79579069:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr16--chr18]"] NDEL1--PARP14 1 0 1.00 0.00 ONLY_REF_SPLICE NDEL1^ENSG00000166579.16 chr17:8454887:+ PARP14^ENSG00000173193.15 chr3:122727812:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr3]"] NDC1--TRAPPC6A 1 0 1.00 0.00 ONLY_REF_SPLICE NDC1^ENSG00000058804.12 chr1:53838205:- TRAPPC6A^ENSG00000007255.10 chr19:45165194:- YES_LDAS 0.0034 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr19]"] NCKAP5--PMFBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCKAP5^ENSG00000176771.17 chr2:133303037:- PMFBP1^ENSG00000118557.16 chr16:72129131:- NO_LDAS 0.0034 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr16]"] NCKAP1L--IL18 1 0 1.00 0.00 ONLY_REF_SPLICE NCKAP1L^ENSG00000123338.13 chr12:54510466:+ IL18^ENSG00000150782.12 chr11:112155082:- NO_LDAS 0.0034 GT 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr11]"] NCAM2--NBEA 1 0 1.00 0.00 ONLY_REF_SPLICE NCAM2^ENSG00000154654.15 chr21:20998618:+ NBEA^ENSG00000172915.19 chr13:35232492:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr21--chr13]"] NCAM1--CNTLN 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCAM1^ENSG00000149294.17 chr11:113277006:+ CNTLN^ENSG00000044459.15 chr9:17226203:+ NO_LDAS 0.0034 GT 1.4295 AG 1.4256 ["INTERCHROMOSOMAL[chr11--chr9]"] NBR2--PAK2 1 0 1.00 0.00 ONLY_REF_SPLICE NBR2^ENSG00000198496.12 chr17:43125770:+ PAK2^ENSG00000180370.10 chr3:196782626:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr3]"] NBEA--DIAPH2 1 0 1.00 0.00 ONLY_REF_SPLICE NBEA^ENSG00000172915.19 chr13:34943114:+ DIAPH2^ENSG00000147202.18 chrX:96881579:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr13--chrX]"] NAT9--AC011330.1 1 0 0.50 0.00 ONLY_REF_SPLICE NAT9^ENSG00000109065.12 chr17:74772896:- AC011330.1^ENSG00000249839.1 chr15:43673928:- YES_LDAS 0.0017 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr15]"] NAPSA--CEP295NL 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAPSA^ENSG00000131400.8 chr19:50359428:- CEP295NL^ENSG00000178404.10 chr17:78873912:- NO_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr17]"] NAPA--RELT 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAPA^ENSG00000105402.8 chr19:47493557:- RELT^ENSG00000054967.13 chr11:73394706:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr11]"] NAIP--AL158175.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE NAIP^ENSG00000249437.8 chr5:70984697:- AL158175.1^ENSG00000283072.3 chr20:22691525:+ NO_LDAS 0.0011 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr5--chr20]"] NAGK--RIOK1 1 0 1.00 0.00 ONLY_REF_SPLICE NAGK^ENSG00000124357.13 chr2:71076701:+ RIOK1^ENSG00000124784.9 chr6:7412889:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr6]"] NACC1--BICD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NACC1^ENSG00000160877.6 chr19:13135645:+ BICD1^ENSG00000151746.15 chr12:32305762:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr12]"] NAB1--ZC3H15 1 0 1.00 0.00 ONLY_REF_SPLICE NAB1^ENSG00000138386.17 chr2:190649360:+ ZC3H15^ENSG00000065548.18 chr2:186495233:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr2:4.14Mb]"] NAAA--NOC2L 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAAA^ENSG00000138744.16 chr4:75940151:- NOC2L^ENSG00000188976.11 chr1:956964:- NO_LDAS 0.0034 GT 1.8256 AG 1.5329 ["INTERCHROMOSOMAL[chr4--chr1]"] NAA35--GTF2IRD2 1 0 0.50 0.00 ONLY_REF_SPLICE NAA35^ENSG00000135040.16 chr9:85978381:+ GTF2IRD2^ENSG00000196275.14 chr7:74836383:- YES_LDAS 0.0017 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr7]"] NAA16--CRYZL1 1 0 1.00 0.00 ONLY_REF_SPLICE NAA16^ENSG00000172766.19 chr13:41318910:+ CRYZL1^ENSG00000205758.12 chr21:33591211:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr13--chr21]"] MYO5A--CADM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYO5A^ENSG00000197535.15 chr15:52410333:- CADM2^ENSG00000175161.14 chr3:84959377:+ NO_LDAS 0.0034 GT 1.9329 AG 0.9710 ["INTERCHROMOSOMAL[chr15--chr3]"] MYO5A--BICD1 1 0 1.00 0.00 ONLY_REF_SPLICE MYO5A^ENSG00000197535.15 chr15:52528780:- BICD1^ENSG00000151746.15 chr12:32377540:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr12]"] MYO1F--KIAA0753 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYO1F^ENSG00000142347.19 chr19:8551751:- KIAA0753^ENSG00000198920.11 chr17:6612108:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] MYO16--ARL6IP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYO16^ENSG00000041515.16 chr13:108779794:+ ARL6IP5^ENSG00000144746.7 chr3:69104464:+ NO_LDAS 0.0034 GT 1.4295 AG 1.8295 ["INTERCHROMOSOMAL[chr13--chr3]"] MYCT1--GBP1 1 0 0.50 0.00 ONLY_REF_SPLICE MYCT1^ENSG00000120279.6 chr6:152698098:+ GBP1^ENSG00000117228.11 chr1:89054875:- YES_LDAS 0.0017 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] MYADM-AS1--SDAD1 1 0 1.00 0.00 ONLY_REF_SPLICE MYADM-AS1^ENSG00000228323.2 chr19:53863080:- SDAD1^ENSG00000198301.12 chr4:75971458:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr4]"] MYADM-AS1--NOSIP 1 0 1.00 0.00 ONLY_REF_SPLICE MYADM-AS1^ENSG00000228323.2 chr19:53863080:- NOSIP^ENSG00000142546.14 chr19:49560692:- NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr19:4.26Mb]"] MVK--INTS10 1 0 1.00 0.00 ONLY_REF_SPLICE MVK^ENSG00000110921.14 chr12:109579282:+ INTS10^ENSG00000104613.12 chr8:19845704:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr8]"] MUC20--SMBD1P 1 0 1.00 0.00 ONLY_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195729739:+ SMBD1P^ENSG00000283426.1 chr3:195708747:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:+:[9241]"] MUC20--SMBD1P 1 0 1.00 0.00 INCL_NON_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195729739:+ SMBD1P^ENSG00000283426.1 chr3:195708134:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:+:[9241]"] MUC20--AC092805.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195733483:+ AC092805.1^ENSG00000287076.1 chr1:90724463:+ NO_LDAS 0.0034 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr1]"] MUC20--AC026412.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195729739:+ AC026412.4^ENSG00000288549.1 chr5:1641022:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr5]"] MTMR14--DYNLT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTMR14^ENSG00000163719.20 chr3:9684670:+ DYNLT1^ENSG00000146425.11 chr6:158636631:- NO_LDAS 0.0034 GT 1.5301 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr6]"] MTMR10--OXSR1 1 0 1.00 0.00 ONLY_REF_SPLICE MTMR10^ENSG00000166912.17 chr15:30990777:- OXSR1^ENSG00000172939.9 chr3:38242743:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr3]"] MT-TY--PTGR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MT-TY^ENSG00000210144.1 chrM:5878:- PTGR1^ENSG00000106853.20 chr9:111574806:- NO_LDAS 0.0034 GT 1.7819 AG 1.5301 ["INTERCHROMOSOMAL[chrM--chr9]"] MT-TY--ARRB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MT-TY^ENSG00000210144.1 chrM:5878:- ARRB2^ENSG00000141480.18 chr17:4720274:+ NO_LDAS 0.0034 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chrM--chr17]"] MST1--LINC01902 1 0 0.33 0.00 INCL_NON_REF_SPLICE MST1^ENSG00000173531.15 chr3:49685471:- LINC01902^ENSG00000283503.2 chr18:39887131:+ NO_LDAS 0.0011 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr18]"] MSR1--GYG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MSR1^ENSG00000038945.15 chr8:16143558:- GYG1^ENSG00000163754.18 chr3:149028735:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr3]"] MSANTD4--RAB20 1 0 1.00 0.00 ONLY_REF_SPLICE MSANTD4^ENSG00000170903.11 chr11:106009583:- RAB20^ENSG00000139832.5 chr13:110524197:- YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr13]"] MRS2--STX6 1 0 1.00 0.00 ONLY_REF_SPLICE MRS2^ENSG00000124532.15 chr6:24418578:+ STX6^ENSG00000135823.14 chr1:180988345:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr1]"] MRPS6--AP000317.1 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ AP000317.1^ENSG00000214955.5 chr21:34293681:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chr21:0.06Mb]","NEIGHBORS[62021]"] MRPS6--AP000317.1 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ AP000317.1^ENSG00000214955.5 chr21:34215500:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr21:0.06Mb]","NEIGHBORS[62021]"] MRPS34--L3MBTL4 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS34^ENSG00000074071.15 chr16:1772795:- L3MBTL4^ENSG00000154655.16 chr18:6031134:- NO_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr18]"] MRPS28--BABAM2 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS28^ENSG00000147586.10 chr8:80030036:- BABAM2^ENSG00000158019.21 chr2:28045725:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr2]"] MRPS24--PEX11G 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS24^ENSG00000062582.14 chr7:43868963:- PEX11G^ENSG00000104883.8 chr19:7482174:- NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr19]"] MRPS24--CEMP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS24^ENSG00000062582.14 chr7:43866863:- CEMP1^ENSG00000205923.3 chr16:2530576:- NO_LDAS 0.0034 GT 1.9656 AG 1.2310 ["INTERCHROMOSOMAL[chr7--chr16]"] MRPL4--ABCA5 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPL4^ENSG00000105364.14 chr19:10259800:+ ABCA5^ENSG00000154265.16 chr17:69314673:- NO_LDAS 0.0034 GT 1.2419 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr17]"] MRPL14--EXOC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPL14^ENSG00000180992.7 chr6:44113873:- EXOC2^ENSG00000112685.14 chr6:637861:- YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr6:43.42Mb]"] MRPL1--ZNF639 1 0 1.00 0.00 ONLY_REF_SPLICE MRPL1^ENSG00000169288.18 chr4:77908375:+ ZNF639^ENSG00000121864.10 chr3:179329618:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr3]"] MPND--ACVR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE MPND^ENSG00000008382.16 chr19:4354129:+ ACVR1B^ENSG00000135503.13 chr12:51996121:+ NO_LDAS 0.0034 GT 1.8323 AG 1.2310 ["INTERCHROMOSOMAL[chr19--chr12]"] MPI--HOXA13 1 0 1.00 0.00 INCL_NON_REF_SPLICE MPI^ENSG00000178802.18 chr15:74893320:+ HOXA13^ENSG00000106031.9 chr7:27195280:- NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr7]"] MPHOSPH8--AC072062.1 1 0 1.00 0.00 ONLY_REF_SPLICE MPHOSPH8^ENSG00000196199.14 chr13:19661838:+ AC072062.1^ENSG00000227769.7 chr2:215017662:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr2]"] MOCS1--GLIPR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MOCS1^ENSG00000124615.20 chr6:39906735:- GLIPR1^ENSG00000139278.10 chr12:75481039:+ NO_LDAS 0.0034 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr12]"] MN1--RTL6 1 0 1.00 0.00 INCL_NON_REF_SPLICE MN1^ENSG00000169184.6 chr22:27798431:- RTL6^ENSG00000188636.4 chr22:44496190:- NO_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTRACHROMOSOMAL[chr22:16.69Mb]"] MMUT--AL138885.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MMUT^ENSG00000146085.8 chr6:49451466:- AL138885.1^ENSG00000216781.2 chr6:10365695:- NO_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTRACHROMOSOMAL[chr6:39.06Mb]"] MLLT10--STX8 1 0 1.00 0.00 ONLY_REF_SPLICE MLLT10^ENSG00000078403.17 chr10:21651768:+ STX8^ENSG00000170310.15 chr17:9378653:- YES_LDAS 0.0034 GT 1.7232 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chr17]"] MLKL--HDAC9 1 0 1.00 0.00 INCL_NON_REF_SPLICE MLKL^ENSG00000168404.13 chr16:74673900:- HDAC9^ENSG00000048052.23 chr7:18997607:+ NO_LDAS 0.0034 GT 1.9329 AG 1.6049 ["INTERCHROMOSOMAL[chr16--chr7]"] MLEC--AL928646.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MLEC^ENSG00000110917.8 chr12:120687364:+ AL928646.1^ENSG00000275110.1 chrX:109054561:+ YES_LDAS 0.0034 GC 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chrX]"] MKNK2P1--NENF 1 0 1.00 0.00 INCL_NON_REF_SPLICE MKNK2P1^ENSG00000233533.1 chr10:36944488:- NENF^ENSG00000117691.10 chr1:212444402:+ NO_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr1]"] MKLN1-AS--AC104619.3 1 0 0.11 0.00 INCL_NON_REF_SPLICE MKLN1-AS^ENSG00000236753.7 chr7:131327986:- AC104619.3^ENSG00000250144.1 chr4:135046584:+ YES_LDAS 0.0004 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr4]"] MKLN1--NIT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MKLN1^ENSG00000128585.18 chr7:131437982:+ NIT1^ENSG00000158793.14 chr1:161124476:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr1]"] MKLN1--AC016831.6 1 0 1.00 0.00 ONLY_REF_SPLICE MKLN1^ENSG00000128585.18 chr7:131327997:+ AC016831.6^ENSG00000285106.2 chr7:131052555:- YES_LDAS 0.0034 GT 1.6729 AG 1.7968 ["INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[65]"] MIRLET7BHG--PRH1 1 0 1.00 0.00 ONLY_REF_SPLICE MIRLET7BHG^ENSG00000197182.14 chr22:46098558:+ PRH1^ENSG00000231887.7 chr12:10973721:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr12]"] MIR6821--AL358074.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR6821^ENSG00000276753.1 chr22:49962888:+ AL358074.1^ENSG00000229582.3 chr9:125746113:- NO_LDAS 0.0034 GT 1.5546 AG 1.4295 ["INTERCHROMOSOMAL[chr22--chr9]"] MIR4435-2HG--PNN 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111239306:- PNN^ENSG00000100941.9 chr14:39175340:+ NO_LDAS 0.0034 GT 1.2366 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr14]"] MIPEP--AIMP1 1 0 1.00 0.00 ONLY_REF_SPLICE MIPEP^ENSG00000027001.10 chr13:23886333:- AIMP1^ENSG00000164022.17 chr4:106324985:+ YES_LDAS 0.0034 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr4]"] MIER1--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE MIER1^ENSG00000198160.15 chr1:66930400:+ STAU2^ENSG00000040341.18 chr8:73688813:- YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr8]"] MIEF1--USPL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIEF1^ENSG00000100335.15 chr22:39514305:+ USPL1^ENSG00000132952.12 chr13:30631166:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr13]"] MID1IP1--SOSTDC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MID1IP1^ENSG00000165175.16 chrX:38806064:+ SOSTDC1^ENSG00000171243.8 chr7:16465553:- YES_LDAS 0.0034 AT 1.9899 AC 1.8295 ["INTERCHROMOSOMAL[chrX--chr7]"] MID1--PITPNC1 1 0 1.00 0.00 ONLY_REF_SPLICE MID1^ENSG00000101871.16 chrX:10553123:- PITPNC1^ENSG00000154217.15 chr17:67552257:+ NO_LDAS 0.0034 GC 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr17]"] MICU1--PALD1 1 0 1.00 0.00 ONLY_REF_SPLICE MICU1^ENSG00000107745.19 chr10:72626010:- PALD1^ENSG00000107719.9 chr10:70525923:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTRACHROMOSOMAL[chr10:1.80Mb]"] MICU1--LINC00298 1 0 0.50 0.00 INCL_NON_REF_SPLICE MICU1^ENSG00000107745.19 chr10:72367361:- LINC00298^ENSG00000235665.6 chr2:7943477:- NO_LDAS 0.0017 GC 1.4295 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr2]"] MIATNB--PITPNB 1 0 1.00 0.00 ONLY_REF_SPLICE MIATNB^ENSG00000244625.7 chr22:26738240:+ PITPNB^ENSG00000180957.18 chr22:27914347:- YES_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTRACHROMOSOMAL[chr22:1.07Mb]"] MGST1--AC007529.2 1 0 1.00 0.00 ONLY_REF_SPLICE MGST1^ENSG00000008394.13 chr12:16383604:+ AC007529.2^ENSG00000283240.1 chr12:16661766:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["BodyMap","GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr12:0.05Mb]","NEIGHBORS[52507]"] MGMT--STN1 1 0 1.00 0.00 ONLY_REF_SPLICE MGMT^ENSG00000170430.10 chr10:129536377:+ STN1^ENSG00000107960.11 chr10:103892252:- YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr10:25.55Mb]"] MGAT4A--NPR2 1 0 1.00 0.00 ONLY_REF_SPLICE MGAT4A^ENSG00000071073.13 chr2:98675035:- NPR2^ENSG00000159899.15 chr9:35799618:+ YES_LDAS 0.0034 GT 1.4295 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr9]"] MFSD6--HIBCH 1 0 1.00 0.00 ONLY_REF_SPLICE MFSD6^ENSG00000151690.15 chr2:190437561:+ HIBCH^ENSG00000198130.16 chr2:190261234:- NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["DEEPEST2019","INTRACHROMOSOMAL[chr2:0.06Mb]","LOCAL_INVERSION:+:-:[64162]"] MFSD1--SRPRB 1 0 1.00 0.00 INCL_NON_REF_SPLICE MFSD1^ENSG00000118855.21 chr3:158822017:+ SRPRB^ENSG00000144867.13 chr3:133819567:+ YES_LDAS 0.0034 GT 1.6729 AG 1.7819 ["INTRACHROMOSOMAL[chr3:24.91Mb]"] MFN1--MFN2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MFN1^ENSG00000171109.19 chr3:179392104:+ MFN2^ENSG00000116688.18 chr1:11981970:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr1]"] MFF--TLK1 1 0 1.00 0.00 ONLY_REF_SPLICE MFF^ENSG00000168958.20 chr2:227342819:+ TLK1^ENSG00000198586.14 chr2:171082852:- YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTRACHROMOSOMAL[chr2:56.09Mb]"] METTL2A--PARP14 1 0 1.00 0.00 ONLY_REF_SPLICE METTL2A^ENSG00000087995.16 chr17:62447766:+ PARP14^ENSG00000173193.15 chr3:122713424:+ YES_LDAS 0.0034 GT 1.8256 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr3]"] METTL24--AC024475.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE METTL24^ENSG00000053328.8 chr6:110246132:- AC024475.2^ENSG00000255314.4 chr11:46171959:+ NO_LDAS 0.0034 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr6--chr11]"] METTL22--ZNF283 1 0 1.00 0.00 ONLY_REF_SPLICE METTL22^ENSG00000067365.15 chr16:8644725:+ ZNF283^ENSG00000167637.18 chr19:43833505:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr19]"] METTL15--SIAE 1 0 1.00 0.00 ONLY_REF_SPLICE METTL15^ENSG00000169519.21 chr11:28296931:+ SIAE^ENSG00000110013.13 chr11:124639867:- NO_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTRACHROMOSOMAL[chr11:96.11Mb]"] MEI1--TEAD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MEI1^ENSG00000167077.13 chr22:41793910:+ TEAD2^ENSG00000074219.14 chr19:49359922:- NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chr19]"] MEGF9--USP32 1 0 1.00 0.00 ONLY_REF_SPLICE MEGF9^ENSG00000106780.9 chr9:120612396:- USP32^ENSG00000170832.13 chr17:60301704:- YES_LDAS 0.0034 GT 1.9899 AG 1.7232 ["INTERCHROMOSOMAL[chr9--chr17]"] MED6--DOCK11 1 0 1.00 0.00 ONLY_REF_SPLICE MED6^ENSG00000133997.12 chr14:70584817:- DOCK11^ENSG00000147251.16 chrX:118542725:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chrX]"] MED17--SESN3 1 0 1.00 0.00 ONLY_REF_SPLICE MED17^ENSG00000042429.12 chr11:93795060:+ SESN3^ENSG00000149212.12 chr11:95178828:- YES_LDAS 0.0034 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr11:1.35Mb]"] MED14--SIAH1 1 0 1.00 0.00 ONLY_REF_SPLICE MED14^ENSG00000180182.11 chrX:40726746:- SIAH1^ENSG00000196470.12 chr16:48362430:- YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr16]"] ME3--ZNF783 1 0 1.00 0.00 INCL_NON_REF_SPLICE ME3^ENSG00000151376.18 chr11:86671796:- ZNF783^ENSG00000204946.10 chr7:149282215:+ YES_LDAS 0.0034 AT 1.8062 AC 1.6402 ["INTERCHROMOSOMAL[chr11--chr7]"] MDP1--CD81-AS1 1 0 0.25 0.00 INCL_NON_REF_SPLICE MDP1^ENSG00000213920.9 chr14:24215951:- CD81-AS1^ENSG00000238184.1 chr11:2394144:- NO_LDAS 0.0008 GC 1.6729 AG 1.7465 ["INTERCHROMOSOMAL[chr14--chr11]"] MDM1--DAPP1 1 0 1.00 0.00 ONLY_REF_SPLICE MDM1^ENSG00000111554.14 chr12:68331107:- DAPP1^ENSG00000070190.13 chr4:99835623:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr4]"] MDH1--MIB1 1 0 1.00 0.00 ONLY_REF_SPLICE MDH1^ENSG00000014641.21 chr2:63589046:+ MIB1^ENSG00000101752.12 chr18:21838365:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr18]"] MCTP1--CHD1 1 0 1.00 0.00 ONLY_REF_SPLICE MCTP1^ENSG00000175471.19 chr5:94931953:- CHD1^ENSG00000153922.11 chr5:98905098:- YES_LDAS 0.0034 GT 1.5546 AG 1.9656 ["INTRACHROMOSOMAL[chr5:3.57Mb]"] MCPH1-AS1--MCPH1 1 0 1.00 0.00 ONLY_REF_SPLICE MCPH1-AS1^ENSG00000249898.8 chr8:6708141:- MCPH1^ENSG00000147316.13 chr8:6499852:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7968 ["INTRACHROMOSOMAL[chr8:0.03Mb]","NEIGHBORS_OVERLAP:-:+:[31198]"] MCM9--UBA6 1 0 1.00 0.00 INCL_NON_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118911650:- UBA6^ENSG00000033178.13 chr4:67665270:- NO_LDAS 0.0034 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr4]"] MBOAT2--RAB7B 1 0 1.00 0.00 ONLY_REF_SPLICE MBOAT2^ENSG00000143797.12 chr2:9003540:- RAB7B^ENSG00000276600.5 chr1:205985665:- YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr1]"] MBD2--GAREM1 1 0 1.00 0.00 ONLY_REF_SPLICE MBD2^ENSG00000134046.12 chr18:54224018:- GAREM1^ENSG00000141441.16 chr18:32393035:- NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr18:21.68Mb]"] MAX--FUT8 1 0 1.00 0.00 ONLY_REF_SPLICE MAX^ENSG00000125952.20 chr14:65101546:- FUT8^ENSG00000033170.17 chr14:65455621:+ NO_LDAS 0.0034 GT 1.9656 AG 1.4566 ["INTRACHROMOSOMAL[chr14:0.31Mb]"] MARK4--POU6F1 1 0 1.00 0.00 ONLY_REF_SPLICE MARK4^ENSG00000007047.15 chr19:45280734:+ POU6F1^ENSG00000184271.17 chr12:51206883:- YES_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr12]"] MAPT-AS1--ANXA10 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAPT-AS1^ENSG00000264589.4 chr17:45843044:- ANXA10^ENSG00000109511.12 chr4:168162528:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr4]"] MAPKAPK3--ATP11C 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAPKAPK3^ENSG00000114738.11 chr3:50617132:+ ATP11C^ENSG00000101974.14 chrX:139932075:- YES_LDAS 0.0034 GT 1.4256 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chrX]"] MAPK14--SPTLC1 1 0 1.00 0.00 ONLY_REF_SPLICE MAPK14^ENSG00000112062.11 chr6:36028273:+ SPTLC1^ENSG00000090054.15 chr9:92059308:- YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr9]"] MAP4K3--LRPPRC 1 0 1.00 0.00 ONLY_REF_SPLICE MAP4K3^ENSG00000011566.15 chr2:39436892:- LRPPRC^ENSG00000138095.19 chr2:43982434:- YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr2:4.45Mb]"] MAP4K3--FGFR1OP2 1 0 1.00 0.00 ONLY_REF_SPLICE MAP4K3^ENSG00000011566.15 chr2:39436892:- FGFR1OP2^ENSG00000111790.14 chr12:26954145:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr12]"] MAP3K7--SMAP1 1 0 1.00 0.00 ONLY_REF_SPLICE MAP3K7^ENSG00000135341.18 chr6:90586764:- SMAP1^ENSG00000112305.15 chr6:70754980:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr6:19.65Mb]"] MAP3K13--TRA2B 1 0 1.00 0.00 ONLY_REF_SPLICE MAP3K13^ENSG00000073803.14 chr3:185328962:+ TRA2B^ENSG00000136527.18 chr3:185926734:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.43Mb]"] MAP2K7--MED8 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP2K7^ENSG00000076984.18 chr19:7906164:+ MED8^ENSG00000159479.17 chr1:43386664:- YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr1]"] MANBA--UBE2D3 1 0 1.00 0.00 ONLY_REF_SPLICE MANBA^ENSG00000109323.11 chr4:102689574:- UBE2D3^ENSG00000109332.20 chr4:102809855:- YES_LDAS 0.0034 GT 1.7232 AG 1.8062 ["Klijn_CellLines","Babiceanu_Normal","INTRACHROMOSOMAL[chr4:0.03Mb]","LOCAL_REARRANGEMENT:-:[33389]"] MANBA--SEPTIN11 1 0 1.00 0.00 ONLY_REF_SPLICE MANBA^ENSG00000109323.11 chr4:102760718:- SEPTIN11^ENSG00000138758.12 chr4:76996425:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr4:25.59Mb]"] MAMDC2--CORO1C 1 0 1.00 0.00 ONLY_REF_SPLICE MAMDC2^ENSG00000165072.10 chr9:70044697:+ CORO1C^ENSG00000110880.11 chr12:108701323:- NO_LDAS 0.0034 GT 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr12]"] MAGIX--ATP6V0D1 1 0 0.33 0.00 INCL_NON_REF_SPLICE MAGIX^ENSG00000269313.5 chrX:49165232:+ ATP6V0D1^ENSG00000159720.12 chr16:67441480:- NO_LDAS 0.0011 GC 1.7819 AG 1.5546 ["INTERCHROMOSOMAL[chrX--chr16]"] MAGI2-AS1--DYNLL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAGI2-AS1^ENSG00000251276.1 chr7:78940794:+ DYNLL1^ENSG00000088986.11 chr12:120498073:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr12]"] M6PR--PRSS30P 1 0 1.00 0.00 INCL_NON_REF_SPLICE M6PR^ENSG00000003056.8 chr12:8946271:- PRSS30P^ENSG00000172460.17 chr16:2841408:- NO_LDAS 0.0034 GT 1.5329 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr16]"] LZTR1--ATP6V1E1 1 0 0.50 0.00 INCL_NON_REF_SPLICE LZTR1^ENSG00000099949.21 chr22:20992244:+ ATP6V1E1^ENSG00000131100.13 chr22:17612833:- NO_LDAS 0.0017 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr22:3.35Mb]"] LYSMD2--DMXL2 1 0 1.00 0.00 ONLY_REF_SPLICE LYSMD2^ENSG00000140280.14 chr15:51737350:- DMXL2^ENSG00000104093.14 chr15:51517167:- YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr15:0.10Mb]"] LYRM4--ZNF12 1 0 1.00 0.00 ONLY_REF_SPLICE LYRM4^ENSG00000214113.11 chr6:5260648:- ZNF12^ENSG00000164631.19 chr7:6692703:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr7]"] LYPLAL1--RRP15 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLAL1^ENSG00000143353.12 chr1:219173981:+ RRP15^ENSG00000067533.6 chr1:218330948:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr1:0.84Mb]"] LUCAT1--PIGL 1 0 1.00 0.00 ONLY_REF_SPLICE LUCAT1^ENSG00000248323.7 chr5:91313638:- PIGL^ENSG00000108474.17 chr17:16299888:+ NO_LDAS 0.0034 GT 1.3383 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr17]"] LUC7L3--MORN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LUC7L3^ENSG00000108848.16 chr17:50741187:+ MORN1^ENSG00000116151.14 chr1:2355447:- NO_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr1]"] LUC7L--MEG8 1 0 1.00 0.00 ONLY_REF_SPLICE LUC7L^ENSG00000007392.17 chr16:229279:- MEG8^ENSG00000225746.13 chr14:100935772:+ YES_LDAS 0.0034 GT 1.6895 AG 1.7968 ["INTERCHROMOSOMAL[chr16--chr14]"] LSM7--SERP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LSM7^ENSG00000130332.15 chr19:2321756:- SERP1^ENSG00000120742.11 chr3:150546152:- YES_LDAS 0.0034 GT 1.6402 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr3]"] LSAMP-AS1--SYNPO2 1 0 0.50 0.00 INCL_NON_REF_SPLICE LSAMP-AS1^ENSG00000240922.1 chr3:116360093:+ SYNPO2^ENSG00000172403.11 chr4:119030108:+ YES_LDAS 0.0017 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr4]"] LRRC8C--FECH 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC8C^ENSG00000171488.15 chr1:89633322:+ FECH^ENSG00000066926.12 chr18:57573365:- YES_LDAS 0.0034 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr18]"] LRRC8C--ARMH3 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC8C^ENSG00000171488.15 chr1:89686611:+ ARMH3^ENSG00000120029.13 chr10:101889490:- YES_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr10]"] LRRC42--AC104417.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE LRRC42^ENSG00000116212.15 chr1:53952428:+ AC104417.2^ENSG00000261710.1 chr8:142090958:+ NO_LDAS 0.0017 GC 1.9219 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr8]"] LRRC37A--PPCS 1 0 0.20 0.00 ONLY_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46306309:+ PPCS^ENSG00000127125.9 chr1:42457247:+ YES_LDAS 0.0007 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr1]"] LRRC1--LINC00943 1 0 1.00 0.00 INCL_NON_REF_SPLICE LRRC1^ENSG00000137269.15 chr6:53896896:+ LINC00943^ENSG00000189238.6 chr12:126747425:+ NO_LDAS 0.0034 GT 1.4295 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr12]"] LRPPRC--PREPL 1 0 1.00 0.00 ONLY_REF_SPLICE LRPPRC^ENSG00000138095.19 chr2:43934190:- PREPL^ENSG00000138078.16 chr2:44346390:- YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr2:0.32Mb]"] LRMDA--IFT81 1 0 1.00 0.00 ONLY_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:75438494:+ IFT81^ENSG00000122970.16 chr12:110167871:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr12]"] LRMDA--DLG2 1 0 1.00 0.00 ONLY_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:75438494:+ DLG2^ENSG00000150672.18 chr11:85111735:- YES_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr10--chr11]"] LRMDA--AC092329.4 1 0 0.50 0.00 INCL_NON_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:76324485:+ AC092329.4^ENSG00000284428.1 chr19:23262643:- NO_LDAS 0.0017 GT 1.8323 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr19]"] LPIN1--PHPT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LPIN1^ENSG00000134324.12 chr2:11771533:+ PHPT1^ENSG00000054148.18 chr9:136850858:+ YES_LDAS 0.0034 GT 1.9219 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr9]"] LMF1--JPT2 1 0 1.00 0.00 ONLY_REF_SPLICE LMF1^ENSG00000103227.19 chr16:954357:- JPT2^ENSG00000206053.13 chr16:1685439:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTRACHROMOSOMAL[chr16:0.70Mb]"] LMAN1--MRPL1 1 0 1.00 0.00 ONLY_REF_SPLICE LMAN1^ENSG00000074695.6 chr18:59345919:- MRPL1^ENSG00000169288.18 chr4:77871744:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr18--chr4]"] LINS1--AC005537.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINS1^ENSG00000140471.17 chr15:100573651:- AC005537.1^ENSG00000232006.9 chr7:42956042:- NO_LDAS 0.0034 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr7]"] LINGO3--NPB 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINGO3^ENSG00000220008.3 chr19:2289766:- NPB^ENSG00000183979.8 chr17:81902729:+ NO_LDAS 0.0034 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chr17]"] LINC02873--BAGE2 1 0 0.08 0.00 INCL_NON_REF_SPLICE LINC02873^ENSG00000175728.4 chr11:130716117:+ BAGE2^ENSG00000187172.15 chr21:10514122:+ NO_LDAS 0.0003 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr21]"] LINC02728--GAB2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02728^ENSG00000251323.3 chr11:78425337:- GAB2^ENSG00000033327.13 chr11:78280901:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[5634]"] LINC02289--VDAC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC02289^ENSG00000258819.2 chr14:77076105:- VDAC3^ENSG00000078668.14 chr8:42398749:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr8]"] LINC02254--CUEDC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC02254^ENSG00000259664.3 chr15:97396083:- CUEDC2^ENSG00000107874.11 chr10:102423717:- NO_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr15--chr10]"] LINC02246--SAMSN1 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02246^ENSG00000281903.2 chr21:14857542:- SAMSN1^ENSG00000155307.19 chr21:14643133:- YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr21:0.16Mb]"] LINC02226--IFIT3 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC02226^ENSG00000245729.2 chr5:8333647:- IFIT3^ENSG00000119917.15 chr10:89338768:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr10]"] LINC01695--MAN2A1 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01695^ENSG00000236532.6 chr21:28163602:- MAN2A1^ENSG00000112893.10 chr5:109713520:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr21--chr5]"] LINC01565--C5orf24 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01565^ENSG00000198685.4 chr3:128575266:- C5orf24^ENSG00000181904.9 chr5:134854898:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr5]"] LINC01499--SCAPER 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01499^ENSG00000255171.7 chr11:41718427:+ SCAPER^ENSG00000140386.13 chr15:76841931:- NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr15]"] LINC01484--RAI14 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01484^ENSG00000253686.2 chr5:173718841:- RAI14^ENSG00000039560.14 chr5:34795939:+ YES_LDAS 0.0034 GT 1.9899 AG 1.6895 ["INTRACHROMOSOMAL[chr5:138.88Mb]"] LINC01465--ZNF680 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01465^ENSG00000221949.6 chr12:62602361:- ZNF680^ENSG00000173041.12 chr7:64563045:- YES_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr7]"] LINC01197--AC109587.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01197^ENSG00000248441.7 chr15:95257083:- AC109587.1^ENSG00000244513.7 chr3:69048165:+ NO_LDAS 0.0034 AT 1.9656 AC 1.6729 ["INTERCHROMOSOMAL[chr15--chr3]"] LINC01176--TBC1D15 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01176^ENSG00000281404.2 chr7:30391035:+ TBC1D15^ENSG00000121749.16 chr12:71872070:+ YES_LDAS 0.0034 GT 1.6402 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chr12]"] LINC01115--HERC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01115^ENSG00000272342.1 chr2:739892:- HERC3^ENSG00000138641.18 chr4:88653031:+ NO_LDAS 0.0034 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr4]"] LINC01002--PCGF2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01002^ENSG00000282508.2 chr19:209769:- PCGF2^ENSG00000277258.5 chr17:38736170:- NO_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr17]"] LINC01002--GTF2IP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01002^ENSG00000282508.2 chr19:239130:- GTF2IP5^ENSG00000224316.1 chr7:65781340:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr7]"] LINC00910--CFAP54 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00910^ENSG00000188825.14 chr17:43387351:- CFAP54^ENSG00000188596.11 chr12:96644140:+ YES_LDAS 0.0034 GT 1.6895 AG 1.6049 ["INTERCHROMOSOMAL[chr17--chr12]"] LINC00893--AGAP9 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00893^ENSG00000241769.7 chrX:149539077:- AGAP9^ENSG00000204172.12 chr10:47522934:- YES_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chrX--chr10]"] LINC00870--H1-0 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00870^ENSG00000243083.7 chr3:72204084:+ H1-0^ENSG00000189060.5 chr22:37806102:+ NO_LDAS 0.0034 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr22]"] LINC00705--SDR16C5 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00705^ENSG00000225269.3 chr10:4659348:+ SDR16C5^ENSG00000170786.13 chr8:56301573:- NO_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr10--chr8]"] LINC00705--RAB28 1 0 0.50 0.00 ONLY_REF_SPLICE LINC00705^ENSG00000225269.3 chr10:4659348:+ RAB28^ENSG00000157869.16 chr4:13381594:- NO_LDAS 0.0017 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr10--chr4]"] LINC00705--ARHGAP11B 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00705^ENSG00000225269.3 chr10:4659348:+ ARHGAP11B^ENSG00000285077.2 chr15:30633490:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr15]"] LINC00685--WDR59 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00685^ENSG00000226179.6 chrX:321822:+ WDR59^ENSG00000103091.15 chr16:74956610:- YES_LDAS 0.0034 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chrY--chr16]"] LINC00680--PLEKHA5 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00680^ENSG00000215190.9 chr6:57959028:- PLEKHA5^ENSG00000052126.15 chr12:19274516:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr12]"] LINC00674--VPS50 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00674^ENSG00000237854.3 chr17:68103058:+ VPS50^ENSG00000004766.17 chr7:93323611:+ YES_LDAS 0.0034 GT 1.8295 AG 1.6729 ["INTERCHROMOSOMAL[chr17--chr7]"] LINC00592--ANKRD13C 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00592^ENSG00000258279.4 chr12:52222943:+ ANKRD13C^ENSG00000118454.13 chr1:70324957:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr1]"] LINC00299--SCAI 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00299^ENSG00000236790.6 chr2:8287338:- SCAI^ENSG00000173611.18 chr9:125056007:- YES_LDAS 0.0034 GT 1.9656 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr9]"] LINC00299--PDS5B 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00299^ENSG00000236790.6 chr2:8312726:- PDS5B^ENSG00000083642.19 chr13:32648754:+ YES_LDAS 0.0034 GT 1.4566 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr13]"] LINC00299--ITGA4 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00299^ENSG00000236790.6 chr2:8287338:- ITGA4^ENSG00000115232.14 chr2:181474960:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr2:172.97Mb]"] LINC00299--DACT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00299^ENSG00000236790.6 chr2:8059211:- DACT1^ENSG00000165617.15 chr14:58646071:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr14]"] LINC00294--TCEAL4 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00294^ENSG00000280798.1 chr11:33076684:+ TCEAL4^ENSG00000133142.18 chrX:103587174:+ NO_LDAS 0.0034 GT 1.8892 AG 1.2310 ["INTERCHROMOSOMAL[chr11--chrX]"] LINC00265--RAB28 1 0 0.50 0.00 ONLY_REF_SPLICE LINC00265^ENSG00000188185.13 chr7:39781351:+ RAB28^ENSG00000157869.16 chr4:13381594:- NO_LDAS 0.0017 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr4]"] LINC-PINT--CAPRIN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130941413:- CAPRIN1^ENSG00000135387.21 chr11:34071726:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr11]"] LILRB4--ZNF575 1 0 1.00 0.00 INCL_NON_REF_SPLICE LILRB4^ENSG00000186818.12 chr19:54664485:+ ZNF575^ENSG00000176472.10 chr19:43526118:+ NO_LDAS 0.0034 GT 1.9899 AG 1.6729 ["INTRACHROMOSOMAL[chr19:11.11Mb]"] LILRA6--CAPZA1P3 1 0 0.50 0.00 INCL_NON_REF_SPLICE LILRA6^ENSG00000244482.10 chr19:54241679:- CAPZA1P3^ENSG00000213698.2 chrX:72728507:- NO_LDAS 0.0017 GT 1.5301 AG 1.6402 ["INTERCHROMOSOMAL[chr19--chrX]"] LIG1--BLM 1 0 1.00 0.00 INCL_NON_REF_SPLICE LIG1^ENSG00000105486.14 chr19:48151232:- BLM^ENSG00000197299.13 chr15:90811239:+ NO_LDAS 0.0034 GT 1.6895 AG 1.5219 ["INTERCHROMOSOMAL[chr19--chr15]"] LGR4--OGFRP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LGR4^ENSG00000205213.14 chr11:27373551:- OGFRP1^ENSG00000182057.5 chr22:42278313:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr11--chr22]"] LGR4--CAPRIN1 1 0 1.00 0.00 ONLY_REF_SPLICE LGR4^ENSG00000205213.14 chr11:27472118:- CAPRIN1^ENSG00000135387.21 chr11:34071726:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8256 ["INTRACHROMOSOMAL[chr11:6.58Mb]"] LEPROTL1--CERS4 1 0 1.00 0.00 ONLY_REF_SPLICE LEPROTL1^ENSG00000104660.19 chr8:30104991:+ CERS4^ENSG00000090661.12 chr19:8254499:+ YES_LDAS 0.0034 GC 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr19]"] LEF1--CHMP2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE LEF1^ENSG00000138795.10 chr4:108048093:- CHMP2B^ENSG00000083937.10 chr3:87253712:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr3]"] LDHB--LURAP1L-AS1 1 0 0.33 0.00 INCL_NON_REF_SPLICE LDHB^ENSG00000111716.14 chr12:21638448:- LURAP1L-AS1^ENSG00000235448.3 chr9:12809625:- NO_LDAS 0.0011 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr9]"] LDB2--IRF2 1 0 1.00 0.00 ONLY_REF_SPLICE LDB2^ENSG00000169744.13 chr4:16898354:- IRF2^ENSG00000168310.11 chr4:184390749:- YES_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr4:167.49Mb]"] LCORL--CD38 1 0 1.00 0.00 ONLY_REF_SPLICE LCORL^ENSG00000178177.16 chr4:17909094:- CD38^ENSG00000004468.13 chr4:15834217:+ YES_LDAS 0.0034 GT 1.7232 AG 1.3383 ["INTRACHROMOSOMAL[chr4:1.99Mb]"] LCMT1--BIRC2 1 0 1.00 0.00 ONLY_REF_SPLICE LCMT1^ENSG00000205629.12 chr16:25111996:+ BIRC2^ENSG00000110330.8 chr11:102362896:+ YES_LDAS 0.0034 GT 1.9899 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr11]"] LCLAT1--AC092651.1 1 0 1.00 0.00 ONLY_REF_SPLICE LCLAT1^ENSG00000172954.14 chr2:30447383:+ AC092651.1^ENSG00000266931.2 chr2:87055800:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr2:56.41Mb]"] LBR--EPHX1 1 0 1.00 0.00 ONLY_REF_SPLICE LBR^ENSG00000143815.15 chr1:225427954:- EPHX1^ENSG00000143819.13 chr1:225828725:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTRACHROMOSOMAL[chr1:0.38Mb]"] LATS1--STK38 1 0 1.00 0.00 INCL_NON_REF_SPLICE LATS1^ENSG00000131023.13 chr6:149680314:- STK38^ENSG00000112079.9 chr6:36525642:- NO_LDAS 0.0034 GT 1.8062 AG 1.5546 ["INTRACHROMOSOMAL[chr6:113.11Mb]"] LATS1--LDOC1 1 0 1.00 0.00 ONLY_REF_SPLICE LATS1^ENSG00000131023.13 chr6:149676260:- LDOC1^ENSG00000182195.9 chrX:141112587:- NO_LDAS 0.0034 GT 1.5546 AG 1.5656 ["INTERCHROMOSOMAL[chr6--chrX]"] LARS2--TMEM115 1 0 1.00 0.00 INCL_NON_REF_SPLICE LARS2^ENSG00000011376.12 chr3:45554566:+ TMEM115^ENSG00000126062.4 chr3:50355439:- NO_LDAS 0.0034 GT 1.7465 AG 1.6049 ["INTRACHROMOSOMAL[chr3:4.80Mb]"] LARGE1--BICD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LARGE1^ENSG00000133424.22 chr22:33650414:- BICD1^ENSG00000151746.15 chr12:32327726:+ YES_LDAS 0.0034 GC 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr22--chr12]"] LAMTOR5-AS1--FAM178B 1 0 1.00 0.00 ONLY_REF_SPLICE LAMTOR5-AS1^ENSG00000224699.9 chr1:110417916:+ FAM178B^ENSG00000168754.15 chr2:96951484:- NO_LDAS 0.0034 GC 1.9329 AG 1.4256 ["INTERCHROMOSOMAL[chr1--chr2]"] LAMTOR3--DNAJB14 1 0 1.00 0.00 ONLY_REF_SPLICE LAMTOR3^ENSG00000109270.13 chr4:99892000:- DNAJB14^ENSG00000164031.17 chr4:99930621:- YES_LDAS 0.0034 GT 1.7232 AG 1.7968 ["INTRACHROMOSOMAL[chr4:0.00Mb]","LOCAL_REARRANGEMENT:-:[1820]"] L3MBTL4--GALNT12 1 0 1.00 0.00 ONLY_REF_SPLICE L3MBTL4^ENSG00000154655.16 chr18:6263947:- GALNT12^ENSG00000119514.7 chr9:98823256:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr18--chr9]"] L3HYPDH--PPM1A 1 0 1.00 0.00 ONLY_REF_SPLICE L3HYPDH^ENSG00000126790.12 chr14:59475869:- PPM1A^ENSG00000100614.18 chr14:60285624:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7819 ["INTRACHROMOSOMAL[chr14:0.76Mb]"] L1TD1--GAPVD1 1 0 1.00 0.00 ONLY_REF_SPLICE L1TD1^ENSG00000240563.2 chr1:62196528:+ GAPVD1^ENSG00000165219.22 chr9:125295458:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr9]"] KRTAP3-2--MAPKAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE KRTAP3-2^ENSG00000212900.3 chr17:40999538:- MAPKAP1^ENSG00000119487.17 chr9:125438947:- NO_LDAS 0.0017 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr17--chr9]"] KRT42P--OGDHL 1 0 1.00 0.00 ONLY_REF_SPLICE KRT42P^ENSG00000214514.8 chr17:41634536:- OGDHL^ENSG00000197444.10 chr10:49752740:- NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr10]"] KREMEN1--MAP3K20 1 0 1.00 0.00 ONLY_REF_SPLICE KREMEN1^ENSG00000183762.13 chr22:29142100:+ MAP3K20^ENSG00000091436.17 chr2:173238373:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr2]"] KRBOX1--GASK1A 1 0 1.00 0.00 ONLY_REF_SPLICE KRBOX1^ENSG00000240747.8 chr3:42942071:+ GASK1A^ENSG00000144649.9 chr3:43032267:+ YES_LDAS 0.0034 GT 1.7968 AG 1.5656 ["INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[36475]"] KNDC1--FOXB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE KNDC1^ENSG00000171798.18 chr10:133183490:+ FOXB1^ENSG00000171956.7 chr15:60005483:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr15]"] KLRF1--ETF1 1 0 1.00 0.00 ONLY_REF_SPLICE KLRF1^ENSG00000150045.12 chr12:9832414:+ ETF1^ENSG00000120705.13 chr5:138511200:- YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr5]"] KLHDC10--RNA5SP508 1 0 1.00 0.00 INCL_NON_REF_SPLICE KLHDC10^ENSG00000128607.14 chr7:130122183:+ RNA5SP508^ENSG00000223259.1 chrX:76655052:- NO_LDAS 0.0034 GT 1.5219 AG 1.5301 ["INTERCHROMOSOMAL[chr7--chrX]"] KLC3--AC009120.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE KLC3^ENSG00000104892.17 chr19:45340779:+ AC009120.2^ENSG00000259972.3 chr16:74305571:- NO_LDAS 0.0034 GT 1.1589 AG 1.5656 ["INTERCHROMOSOMAL[chr19--chr16]"] KITLG--LINC01415 1 0 1.00 0.00 INCL_NON_REF_SPLICE KITLG^ENSG00000049130.16 chr12:88515534:- LINC01415^ENSG00000267325.2 chr18:55777855:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr18]"] KIF19--FBXO21 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIF19^ENSG00000196169.15 chr17:74355637:+ FBXO21^ENSG00000135108.15 chr12:117167012:- NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr12]"] KIDINS220--WBP11 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIDINS220^ENSG00000134313.16 chr2:8731475:- WBP11^ENSG00000084463.8 chr12:14793795:- NO_LDAS 0.0034 GT 1.3996 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr12]"] KIAA1841--CCDC14 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1841^ENSG00000162929.14 chr2:61118116:+ CCDC14^ENSG00000175455.16 chr3:123956795:- YES_LDAS 0.0034 GT 1.1589 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr3]"] KIAA1191--SIMC1 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1191^ENSG00000122203.15 chr5:176361602:- SIMC1^ENSG00000170085.18 chr5:176313691:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_INVERSION:-:+:[71]"] KIAA0825--FAM172A 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA0825^ENSG00000185261.14 chr5:94417201:- FAM172A^ENSG00000113391.19 chr5:94074769:- YES_LDAS 0.0034 GT 1.8062 AG 1.9656 ["ChimerSeq","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[41267]"] KIAA0232--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA0232^ENSG00000170871.12 chr4:6782841:+ ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0034 GT 1.7056 AG 1.4566 ["INTERCHROMOSOMAL[chr4--chr18]"] KHDRBS2-OT1--KHDRBS2 1 0 1.00 0.00 ONLY_REF_SPLICE KHDRBS2-OT1^ENSG00000250686.2 chr6:61652255:- KHDRBS2^ENSG00000112232.10 chr6:61732764:- NO_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[1088]"] KHDRBS1--UBXN7 1 0 1.00 0.00 ONLY_REF_SPLICE KHDRBS1^ENSG00000121774.18 chr1:32014377:+ UBXN7^ENSG00000163960.12 chr3:196407393:- NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr3]"] KDM7A--SLC37A3 1 0 1.00 0.00 ONLY_REF_SPLICE KDM7A^ENSG00000006459.11 chr7:140127442:- SLC37A3^ENSG00000157800.18 chr7:140355764:- YES_LDAS 0.0034 GT 1.6895 AG 1.7819 ["INTRACHROMOSOMAL[chr7:0.12Mb]"] KDM7A--ANKRD20A9P 1 0 1.00 0.00 INCL_NON_REF_SPLICE KDM7A^ENSG00000006459.11 chr7:140113462:- ANKRD20A9P^ENSG00000206192.7 chr13:18841605:- NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr13]"] KDM4C--HBP1 1 0 1.00 0.00 ONLY_REF_SPLICE KDM4C^ENSG00000107077.19 chr9:6888063:+ HBP1^ENSG00000105856.14 chr7:107190173:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr9--chr7]"] KCTD6--CARF 1 0 0.50 0.00 ONLY_REF_SPLICE KCTD6^ENSG00000168301.13 chr3:58500403:+ CARF^ENSG00000138380.18 chr2:202952559:+ NO_LDAS 0.0017 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr2]"] KCNQ5--CRTC3-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE KCNQ5^ENSG00000185760.17 chr6:72622587:+ CRTC3-AS1^ENSG00000259736.1 chr15:90715042:- NO_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr15]"] KCNJ2--SMPD5 1 0 0.25 0.00 INCL_NON_REF_SPLICE KCNJ2^ENSG00000123700.5 chr17:70179098:+ SMPD5^ENSG00000204791.10 chr8:144051269:+ YES_LDAS 0.0008 GT 0.0000 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr8]"] KCNH7--PEX26 1 0 1.00 0.00 INCL_NON_REF_SPLICE KCNH7^ENSG00000184611.12 chr2:162396894:- PEX26^ENSG00000215193.14 chr22:18087972:+ NO_LDAS 0.0034 GT 1.8892 AG 0.9183 ["INTERCHROMOSOMAL[chr2--chr22]"] KCNB1--STX7 1 0 0.33 0.00 INCL_NON_REF_SPLICE KCNB1^ENSG00000158445.10 chr20:49295736:- STX7^ENSG00000079950.14 chr6:132464071:- NO_LDAS 0.0011 GT 1.7056 AG 1.9219 ["INTERCHROMOSOMAL[chr20--chr6]"] KCNB1--SBDS 1 0 0.33 0.00 INCL_NON_REF_SPLICE KCNB1^ENSG00000158445.10 chr20:49295736:- SBDS^ENSG00000126524.10 chr7:66991258:- NO_LDAS 0.0011 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr7]"] KCNB1--RALB 1 0 0.33 0.00 INCL_NON_REF_SPLICE KCNB1^ENSG00000158445.10 chr20:49295736:- RALB^ENSG00000144118.14 chr2:120285953:+ NO_LDAS 0.0011 GT 1.7056 AG 1.9899 ["INTERCHROMOSOMAL[chr20--chr2]"] KBTBD2--MATN2 1 0 1.00 0.00 ONLY_REF_SPLICE KBTBD2^ENSG00000170852.11 chr7:32891536:- MATN2^ENSG00000132561.14 chr8:97930953:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr8]"] KANTR--POLA1 1 0 1.00 0.00 ONLY_REF_SPLICE KANTR^ENSG00000232593.7 chrX:53094474:+ POLA1^ENSG00000101868.13 chrX:24704389:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chrX:28.10Mb]"] KANSL2--NFX1 1 0 1.00 0.00 ONLY_REF_SPLICE KANSL2^ENSG00000139620.13 chr12:48679036:- NFX1^ENSG00000086102.19 chr9:33364010:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr9]"] JMY--ARSB 1 0 1.00 0.00 ONLY_REF_SPLICE JMY^ENSG00000152409.9 chr5:79237682:+ ARSB^ENSG00000113273.17 chr5:78969192:- YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.25Mb]"] JMJD6--PICK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE JMJD6^ENSG00000070495.15 chr17:76726347:- PICK1^ENSG00000100151.16 chr22:38074319:+ YES_LDAS 0.0034 GT 1.2729 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr22]"] JCHAIN--DHRS4-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE JCHAIN^ENSG00000132465.12 chr4:70657211:- DHRS4-AS1^ENSG00000215256.4 chr14:24045666:- NO_LDAS 0.0017 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr4--chr14]"] JAG2--PCDHB6 1 0 1.00 0.00 INCL_NON_REF_SPLICE JAG2^ENSG00000184916.9 chr14:105157702:- PCDHB6^ENSG00000113211.6 chr5:141152135:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chr5]"] ITGA9--PCDH15 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA9^ENSG00000144668.12 chr3:37481607:+ PCDH15^ENSG00000150275.19 chr10:54346484:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr10]"] ITGA9--OSBPL10 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA9^ENSG00000144668.12 chr3:37542585:+ OSBPL10^ENSG00000144645.15 chr3:31748120:- YES_LDAS 0.0034 GT 1.9219 AG 1.9086 ["INTRACHROMOSOMAL[chr3:5.37Mb]"] ITGA4--ACVR1 1 0 1.00 0.00 ONLY_REF_SPLICE ITGA4^ENSG00000115232.14 chr2:181458317:+ ACVR1^ENSG00000115170.15 chr2:157799500:- YES_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chr2:23.58Mb]"] ITCH--AK6 1 0 1.00 0.00 ONLY_REF_SPLICE ITCH^ENSG00000078747.16 chr20:34369470:+ AK6^ENSG00000085231.14 chr5:69366595:- YES_LDAS 0.0034 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr20--chr5]"] ISY1--MRPS11 1 0 1.00 0.00 INCL_NON_REF_SPLICE ISY1^ENSG00000240682.10 chr3:129145757:- MRPS11^ENSG00000181991.16 chr15:88478553:+ NO_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr15]"] IST1--GRAP2 1 0 1.00 0.00 ONLY_REF_SPLICE IST1^ENSG00000182149.21 chr16:71895589:+ GRAP2^ENSG00000100351.17 chr22:39947093:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr22]"] IST1--AC016949.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IST1^ENSG00000182149.21 chr16:71922684:+ AC016949.1^ENSG00000230732.4 chr3:196913007:+ NO_LDAS 0.0034 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr3]"] IRF9--AKAP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE IRF9^ENSG00000213928.9 chr14:24163959:+ AKAP3^ENSG00000111254.8 chr12:4627979:- NO_LDAS 0.0034 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chr14--chr12]"] IRF2--MGAT4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE IRF2^ENSG00000168310.11 chr4:184418532:- MGAT4A^ENSG00000071073.13 chr2:98635268:- NO_LDAS 0.0034 GT 1.9656 AG 1.2419 ["INTERCHROMOSOMAL[chr4--chr2]"] IQGAP2--AGTPBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IQGAP2^ENSG00000145703.16 chr5:76632026:+ AGTPBP1^ENSG00000135049.16 chr9:85646435:- YES_LDAS 0.0034 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr9]"] IPP--AD001527.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IPP^ENSG00000197429.11 chr1:45727631:- AD001527.1^ENSG00000270760.1 chr19:36148044:- NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr19]"] IPO8--NUP43 1 0 1.00 0.00 INCL_NON_REF_SPLICE IPO8^ENSG00000133704.10 chr12:30690496:- NUP43^ENSG00000120253.14 chr6:149726389:- NO_LDAS 0.0034 GT 1.8256 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr6]"] IPO8--AC024940.1 1 0 1.00 0.00 ONLY_REF_SPLICE IPO8^ENSG00000133704.10 chr12:30695564:- AC024940.1^ENSG00000177359.20 chr12:31159054:- YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTRACHROMOSOMAL[chr12:0.42Mb]"] IPO11--CYFIP2 1 0 1.00 0.00 ONLY_REF_SPLICE IPO11^ENSG00000086200.17 chr5:62506357:+ CYFIP2^ENSG00000055163.20 chr5:157285339:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr5:94.64Mb]"] INTS9-AS1--TYW1 1 0 0.50 0.00 ONLY_REF_SPLICE INTS9-AS1^ENSG00000254034.2 chr8:28798641:+ TYW1^ENSG00000198874.13 chr7:67067285:+ YES_LDAS 0.0017 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr8--chr7]"] INPP5B--ARHGAP39 1 0 0.50 0.00 INCL_NON_REF_SPLICE INPP5B^ENSG00000204084.13 chr1:37945794:- ARHGAP39^ENSG00000147799.11 chr8:144545772:- NO_LDAS 0.0017 GT 1.7465 AG 1.5219 ["INTERCHROMOSOMAL[chr1--chr8]"] INPP5A--FAM53B 1 0 1.00 0.00 ONLY_REF_SPLICE INPP5A^ENSG00000068383.19 chr10:132749845:+ FAM53B^ENSG00000189319.14 chr10:124706887:- YES_LDAS 0.0034 GT 1.5656 AG 1.9899 ["INTRACHROMOSOMAL[chr10:7.79Mb]"] INPP4A--ATP1A3 1 0 0.50 0.00 INCL_NON_REF_SPLICE INPP4A^ENSG00000040933.16 chr2:98563622:+ ATP1A3^ENSG00000105409.19 chr19:41982106:- NO_LDAS 0.0017 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr19]"] INO80D--ZNF517 1 0 1.00 0.00 ONLY_REF_SPLICE INO80D^ENSG00000114933.16 chr2:206063569:- ZNF517^ENSG00000197363.9 chr8:144802870:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr8]"] IMMP2L--ZDHHC17 1 0 1.00 0.00 ONLY_REF_SPLICE IMMP2L^ENSG00000184903.10 chr7:111487238:- ZDHHC17^ENSG00000186908.15 chr12:76805317:+ YES_LDAS 0.0034 GT 1.8295 AG 1.5058 ["INTERCHROMOSOMAL[chr7--chr12]"] IMMP2L--ELP4 1 0 1.00 0.00 ONLY_REF_SPLICE IMMP2L^ENSG00000184903.10 chr7:111487238:- ELP4^ENSG00000109911.19 chr11:31783393:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr11]"] IMMP2L--EIPR1 1 0 1.00 0.00 ONLY_REF_SPLICE IMMP2L^ENSG00000184903.10 chr7:111487238:- EIPR1^ENSG00000032389.13 chr2:3257455:- YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr2]"] IL7--AC068700.2 1 0 1.00 0.00 ONLY_REF_SPLICE IL7^ENSG00000104432.14 chr8:78798072:- AC068700.2^ENSG00000286675.1 chr8:78630426:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[9761]"] IL6ST--RNF128 1 0 1.00 0.00 ONLY_REF_SPLICE IL6ST^ENSG00000134352.20 chr5:55982724:- RNF128^ENSG00000133135.14 chrX:106772913:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chrX]"] IL1R1--SRP72P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE IL1R1^ENSG00000115594.12 chr2:102166281:+ SRP72P2^ENSG00000188451.8 chr6:158242386:- NO_LDAS 0.0034 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr6]"] IL15RA--SGMS1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IL15RA^ENSG00000134470.21 chr10:5956379:- SGMS1-AS1^ENSG00000226200.7 chr10:50634060:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr10:44.65Mb]"] IL15RA--AC109630.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE IL15RA^ENSG00000134470.21 chr10:5977405:- AC109630.1^ENSG00000259269.2 chr15:39496646:+ NO_LDAS 0.0017 GT 1.2729 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr15]"] IL15--PARP15 1 0 1.00 0.00 ONLY_REF_SPLICE IL15^ENSG00000164136.17 chr4:141636748:+ PARP15^ENSG00000173200.13 chr3:122605936:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr3]"] IL13RA1--FBXL20 1 0 1.00 0.00 INCL_NON_REF_SPLICE IL13RA1^ENSG00000131724.11 chrX:118792432:+ FBXL20^ENSG00000108306.13 chr17:39303639:- NO_LDAS 0.0034 GT 1.8892 AG 1.4256 ["INTERCHROMOSOMAL[chrX--chr17]"] IKZF3--TMEM258 1 0 1.00 0.00 INCL_NON_REF_SPLICE IKZF3^ENSG00000161405.17 chr17:39762151:- TMEM258^ENSG00000134825.16 chr11:61774137:- NO_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr11]"] IKZF1--RNY3 1 0 0.25 0.00 INCL_NON_REF_SPLICE IKZF1^ENSG00000185811.19 chr7:50376771:+ RNY3^ENSG00000202354.1 chr7:148983802:+ YES_LDAS 0.0008 GT 1.9656 AG 1.7232 ["INTRACHROMOSOMAL[chr7:98.58Mb]"] IKZF1--MBD2 1 0 1.00 0.00 ONLY_REF_SPLICE IKZF1^ENSG00000185811.19 chr7:50327757:+ MBD2^ENSG00000134046.12 chr18:54189011:- YES_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr18]"] IKBKE--MGST3 1 0 1.00 0.00 INCL_NON_REF_SPLICE IKBKE^ENSG00000263528.8 chr1:206478205:+ MGST3^ENSG00000143198.13 chr1:165653768:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr1:40.81Mb]"] IGSF3--WDR12 1 0 1.00 0.00 INCL_NON_REF_SPLICE IGSF3^ENSG00000143061.18 chr1:116584645:- WDR12^ENSG00000138442.10 chr2:202879096:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr2]"] IGSF3--IST1 1 0 1.00 0.00 ONLY_REF_SPLICE IGSF3^ENSG00000143061.18 chr1:116607942:- IST1^ENSG00000182149.21 chr16:71922474:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr16]"] IGF2BP3--ATF1 1 0 1.00 0.00 ONLY_REF_SPLICE IGF2BP3^ENSG00000136231.14 chr7:23469936:- ATF1^ENSG00000123268.9 chr12:50780140:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chr12]"] IFT43--FAM122C 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFT43^ENSG00000119650.13 chr14:75902224:+ FAM122C^ENSG00000156500.15 chrX:134835679:+ NO_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr14--chrX]"] IFT22--RIPOR3 1 0 1.00 0.00 ONLY_REF_SPLICE IFT22^ENSG00000128581.17 chr7:101316340:- RIPOR3^ENSG00000042062.13 chr20:50630856:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr20]"] IFT172--GZF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFT172^ENSG00000138002.16 chr2:27479509:- GZF1^ENSG00000125812.16 chr20:23371519:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr20]"] IFITM3P5--HES4 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFITM3P5^ENSG00000238168.5 chr12:111581551:+ HES4^ENSG00000188290.11 chr1:999397:- YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr1]"] IFIT5--ELMO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFIT5^ENSG00000152778.10 chr10:89418706:+ ELMO1^ENSG00000155849.16 chr7:36854446:- YES_LDAS 0.0034 GT 1.4566 AG 0.7219 ["INTERCHROMOSOMAL[chr10--chr7]"] IFI16--TPRG1 1 0 1.00 0.00 ONLY_REF_SPLICE IFI16^ENSG00000163565.19 chr1:159006041:+ TPRG1^ENSG00000188001.10 chr3:189215292:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr3]"] IDH3G--SRPK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE IDH3G^ENSG00000067829.19 chrX:153785803:- SRPK3^ENSG00000184343.11 chrX:153782121:+ YES_LDAS 0.0034 GT 1.6729 AG 1.7819 ["INTRACHROMOSOMAL[chrX:0.00Mb]","LOCAL_INVERSION:-:+:[34]"] IDH3G--BX537318.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE IDH3G^ENSG00000067829.19 chrX:153787051:- BX537318.2^ENSG00000280424.1 chr22:46010004:+ NO_LDAS 0.0034 GT 1.7056 AG 1.6895 ["INTERCHROMOSOMAL[chrX--chr22]"] IDE--ZFP64 1 0 1.00 0.00 ONLY_REF_SPLICE IDE^ENSG00000119912.18 chr10:92554722:- ZFP64^ENSG00000020256.20 chr20:52166025:- YES_LDAS 0.0034 GC 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr20]"] IDE--TMEM116 1 0 1.00 0.00 ONLY_REF_SPLICE IDE^ENSG00000119912.18 chr10:92462484:- TMEM116^ENSG00000198270.13 chr12:111991889:- YES_LDAS 0.0034 GC 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr12]"] IDE--SHLD2P1 1 0 0.50 0.00 ONLY_REF_SPLICE IDE^ENSG00000119912.18 chr10:92555372:- SHLD2P1^ENSG00000165874.13 chr10:46611449:- NO_LDAS 0.0017 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr10:45.80Mb]"] IDE--KLHL24 1 0 1.00 0.00 ONLY_REF_SPLICE IDE^ENSG00000119912.18 chr10:92573922:- KLHL24^ENSG00000114796.16 chr3:183643480:+ YES_LDAS 0.0034 GT 1.6729 AG 1.5301 ["INTERCHROMOSOMAL[chr10--chr3]"] HYAL1--CSF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE HYAL1^ENSG00000114378.17 chr3:50300988:- CSF3^ENSG00000108342.13 chr17:40017684:+ NO_LDAS 0.0034 GT 1.5546 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr17]"] HYAL1--BOC 1 0 1.00 0.00 INCL_NON_REF_SPLICE HYAL1^ENSG00000114378.17 chr3:50300511:- BOC^ENSG00000144857.14 chr3:113268385:+ NO_LDAS 0.0034 GT 1.8323 AG 1.3996 ["INTRACHROMOSOMAL[chr3:62.90Mb]"] HUS1--PI4K2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE HUS1^ENSG00000136273.13 chr7:47975651:- PI4K2A^ENSG00000155252.13 chr10:97675844:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr10]"] HTR5A-AS1--NOS3 1 0 0.33 0.00 INCL_NON_REF_SPLICE HTR5A-AS1^ENSG00000220575.8 chr7:155071349:- NOS3^ENSG00000164867.11 chr7:151013871:+ NO_LDAS 0.0011 GT 1.6729 AG 1.8295 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] HSPA4--CADM3 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSPA4^ENSG00000170606.15 chr5:133070500:+ CADM3^ENSG00000162706.13 chr1:159192659:+ YES_LDAS 0.0034 GT 1.5628 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr1]"] HSP90B3P--NSF 1 0 0.50 0.00 INCL_NON_REF_SPLICE HSP90B3P^ENSG00000203914.4 chr1:91642691:+ NSF^ENSG00000073969.18 chr17:46692903:+ NO_LDAS 0.0017 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr17]"] HSD17B11--UBR1 1 0 1.00 0.00 ONLY_REF_SPLICE HSD17B11^ENSG00000198189.11 chr4:87390861:- UBR1^ENSG00000159459.12 chr15:43086240:- YES_LDAS 0.0034 GT 1.5301 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr15]"] HSBP1L1--TGS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSBP1L1^ENSG00000226742.4 chr18:79966762:+ TGS1^ENSG00000137574.11 chr8:55773631:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr18--chr8]"] HSBP1L1--RRH 1 0 1.00 0.00 ONLY_REF_SPLICE HSBP1L1^ENSG00000226742.4 chr18:79964786:+ RRH^ENSG00000180245.7 chr4:109844083:+ NO_LDAS 0.0034 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr4]"] HSBP1L1--CAPN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSBP1L1^ENSG00000226742.4 chr18:79966759:+ CAPN3^ENSG00000092529.25 chr15:42387769:+ NO_LDAS 0.0034 GT 1.4716 AG 1.5546 ["INTERCHROMOSOMAL[chr18--chr15]"] HP--STK38 1 0 1.00 0.00 INCL_NON_REF_SPLICE HP^ENSG00000257017.9 chr16:72055741:+ STK38^ENSG00000112079.9 chr6:36498385:- NO_LDAS 0.0034 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr16--chr6]"] HOMER2--CSNK1G1 1 0 1.00 0.00 ONLY_REF_SPLICE HOMER2^ENSG00000103942.13 chr15:82864167:- CSNK1G1^ENSG00000169118.18 chr15:64180454:- YES_LDAS 0.0034 GT 1.8062 AG 1.9899 ["INTRACHROMOSOMAL[chr15:18.48Mb]"] HNRNPLL--AC093525.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPLL^ENSG00000143889.16 chr2:38568199:- AC093525.3^ENSG00000260436.1 chr16:2571632:- YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr16]"] HNRNPC--AC009065.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPC^ENSG00000092199.18 chr14:21234032:- AC009065.2^ENSG00000259933.6 chr16:2092931:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr16]"] HNRNPA1L2--HNRNPA1P29 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPA1L2^ENSG00000139675.12 chr13:52643105:+ HNRNPA1P29^ENSG00000235784.2 chr13:93395282:- NO_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr13:40.75Mb]"] HNF1A-AS1--GXYLT2 1 0 1.00 0.00 ONLY_REF_SPLICE HNF1A-AS1^ENSG00000241388.5 chr12:120980644:- GXYLT2^ENSG00000172986.13 chr3:72998077:+ YES_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr12--chr3]"] HMGCS1--NNT 1 0 1.00 0.00 ONLY_REF_SPLICE HMGCS1^ENSG00000112972.15 chr5:43313356:- NNT^ENSG00000112992.18 chr5:43675511:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr5:0.29Mb]"] HMGA1P4--CU639417.3 1 0 0.50 0.00 INCL_NON_REF_SPLICE HMGA1P4^ENSG00000234705.2 chr9:128684366:- CU639417.3^ENSG00000280013.1 chr21:6008605:+ YES_LDAS 0.0017 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr21]"] HLTF--PRPF38A 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLTF^ENSG00000071794.16 chr3:149086529:- PRPF38A^ENSG00000134748.13 chr1:52414621:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr1]"] HLA-G--RUFY1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLA-G^ENSG00000204632.12 chr6:29830600:+ RUFY1^ENSG00000176783.15 chr5:179609464:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr5]"] HK2--ARHGAP9 1 0 1.00 0.00 INCL_NON_REF_SPLICE HK2^ENSG00000159399.10 chr2:74834503:+ ARHGAP9^ENSG00000123329.20 chr12:57475895:- NO_LDAS 0.0034 GT 1.4295 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr12]"] HINT3--SREBF2-AS1 1 0 0.03 0.00 INCL_NON_REF_SPLICE HINT3^ENSG00000111911.7 chr6:125979917:+ SREBF2-AS1^ENSG00000184068.2 chr22:41833336:- NO_LDAS 0.0001 GT 1.7465 AG 1.6729 ["INTERCHROMOSOMAL[chr6--chr22]"] HIGD1A--ULK4 1 0 1.00 0.00 ONLY_REF_SPLICE HIGD1A^ENSG00000181061.14 chr3:42794157:- ULK4^ENSG00000168038.11 chr3:41398264:- YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.82Mb]"] HHAT--ZNF107 1 0 1.00 0.00 INCL_NON_REF_SPLICE HHAT^ENSG00000054392.13 chr1:210482514:+ ZNF107^ENSG00000196247.11 chr7:64706324:+ NO_LDAS 0.0034 GT 1.8256 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr7]"] HGF--TOB2 1 0 0.50 0.00 INCL_NON_REF_SPLICE HGF^ENSG00000019991.18 chr7:81769920:- TOB2^ENSG00000183864.5 chr22:41436889:- NO_LDAS 0.0017 AT 1.8892 AC 1.5546 ["INTERCHROMOSOMAL[chr7--chr22]"] HFE--AC113385.3 1 0 0.08 0.00 ONLY_REF_SPLICE HFE^ENSG00000010704.19 chr6:26087516:+ AC113385.3^ENSG00000275374.1 chr5:100381398:- YES_LDAS 0.0003 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr5]"] HEATR5B--KRT18P36 1 0 0.50 0.00 INCL_NON_REF_SPLICE HEATR5B^ENSG00000008869.12 chr2:37068685:- KRT18P36^ENSG00000226246.1 chr9:30800076:- NO_LDAS 0.0017 GT 1.5546 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr9]"] HEATR1--PRRC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HEATR1^ENSG00000119285.11 chr1:236576884:- PRRC1^ENSG00000164244.21 chr5:127547875:+ NO_LDAS 0.0034 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr5]"] HDHD2--UBE2V1 1 0 1.00 0.00 ONLY_REF_SPLICE HDHD2^ENSG00000167220.12 chr18:47150378:- UBE2V1^ENSG00000244687.12 chr20:50096820:- YES_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr20]"] HCLS1--CEP72 1 0 1.00 0.00 INCL_NON_REF_SPLICE HCLS1^ENSG00000180353.11 chr3:121660911:- CEP72^ENSG00000112877.8 chr5:644299:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr5]"] HCG21--PPIP5K1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HCG21^ENSG00000233529.1 chr6:30953013:- PPIP5K1^ENSG00000168781.22 chr15:43590077:- YES_LDAS 0.0034 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr6--chr15]"] HBS1L--PEX7 1 0 1.00 0.00 ONLY_REF_SPLICE HBS1L^ENSG00000112339.15 chr6:135054649:- PEX7^ENSG00000112357.14 chr6:136898142:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8295 ["INTRACHROMOSOMAL[chr6:1.72Mb]"] HAUS4--NPHP3 1 0 1.00 0.00 ONLY_REF_SPLICE HAUS4^ENSG00000092036.19 chr14:22951555:- NPHP3^ENSG00000113971.20 chr3:132691286:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr3]"] HARS2--MTND6P10 1 0 1.00 0.00 INCL_NON_REF_SPLICE HARS2^ENSG00000112855.17 chr5:140697296:+ MTND6P10^ENSG00000227275.1 chr2:131370106:+ NO_LDAS 0.0034 GC 1.4566 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr2]"] HARS1--KIAA1841 1 0 1.00 0.00 ONLY_REF_SPLICE HARS1^ENSG00000170445.16 chr5:140690855:- KIAA1841^ENSG00000162929.14 chr2:61115979:+ YES_LDAS 0.0034 GT 1.5628 AG 1.2729 ["INTERCHROMOSOMAL[chr5--chr2]"] HAPLN3--SLC12A6 1 0 1.00 0.00 INCL_NON_REF_SPLICE HAPLN3^ENSG00000140511.12 chr15:88881357:- SLC12A6^ENSG00000140199.13 chr15:34233840:- YES_LDAS 0.0034 GT 1.7232 AG 1.7968 ["INTRACHROMOSOMAL[chr15:54.54Mb]"] HAGLR--RYK 1 0 1.00 0.00 INCL_NON_REF_SPLICE HAGLR^ENSG00000224189.8 chr2:176173910:- RYK^ENSG00000163785.13 chr3:134195156:- NO_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr3]"] HADHB--GMDS 1 0 1.00 0.00 ONLY_REF_SPLICE HADHB^ENSG00000138029.14 chr2:26254474:+ GMDS^ENSG00000112699.11 chr6:1960966:- YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr6]"] HADH--DNAH6 1 0 1.00 0.00 ONLY_REF_SPLICE HADH^ENSG00000138796.17 chr4:108023563:+ DNAH6^ENSG00000115423.19 chr2:84624265:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr2]"] HACL1--COLQ 1 0 1.00 0.00 ONLY_REF_SPLICE HACL1^ENSG00000131373.15 chr3:15563358:- COLQ^ENSG00000206561.14 chr3:15489637:- NO_LDAS 0.0034 GT 1.5850 AG 1.6729 ["Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[38948]"] HACD3--CRY1 1 0 1.00 0.00 ONLY_REF_SPLICE HACD3^ENSG00000074696.13 chr15:65564342:+ CRY1^ENSG00000008405.12 chr12:107005248:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr12]"] GYG2--ZFAND6 1 0 0.50 0.00 ONLY_REF_SPLICE GYG2^ENSG00000056998.20 chrX:2843354:+ ZFAND6^ENSG00000086666.19 chr15:80120328:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr15]"] GYG2--PRKX 1 0 0.25 0.00 ONLY_REF_SPLICE GYG2^ENSG00000056998.20 chrX:2843354:+ PRKX^ENSG00000183943.6 chrX:3674766:- YES_LDAS 0.0008 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chrX:0.72Mb]"] GYG2--ARSFP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GYG2^ENSG00000056998.20 chrX:2843354:+ ARSFP1^ENSG00000232226.2 chrY:12258031:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chrX--chrY]"] GXYLT2--PDZRN3 1 0 1.00 0.00 ONLY_REF_SPLICE GXYLT2^ENSG00000172986.13 chr3:72922335:+ PDZRN3^ENSG00000121440.15 chr3:73404395:- NO_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTRACHROMOSOMAL[chr3:0.38Mb]"] GXYLT1--YAF2 1 0 1.00 0.00 ONLY_REF_SPLICE GXYLT1^ENSG00000151233.11 chr12:42144426:- YAF2^ENSG00000015153.15 chr12:42161765:- YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr12:0.01Mb]","LOCAL_REARRANGEMENT:-:[12230]"] GXYLT1--PPHLN1 1 0 1.00 0.00 ONLY_REF_SPLICE GXYLT1^ENSG00000151233.11 chr12:42119000:- PPHLN1^ENSG00000134283.18 chr12:42335883:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["Klijn_CellLines","INTRACHROMOSOMAL[chr12:0.09Mb]","LOCAL_INVERSION:-:+:[93573]"] GTPBP6--PPP2R3B 1 0 1.00 0.00 ONLY_REF_SPLICE GTPBP6^ENSG00000178605.13 chrX:318439:- PPP2R3B^ENSG00000167393.18 chrX:361590:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["DEEPEST2019","HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chrY]"] GTF3C2--RARS1 1 0 1.00 0.00 ONLY_REF_SPLICE GTF3C2^ENSG00000115207.13 chr2:27335598:- RARS1^ENSG00000113643.9 chr5:168488602:+ YES_LDAS 0.0034 GT 1.6402 AG 1.3383 ["INTERCHROMOSOMAL[chr2--chr5]"] GTF3C2--EXOC6B 1 0 1.00 0.00 ONLY_REF_SPLICE GTF3C2^ENSG00000115207.13 chr2:27356739:- EXOC6B^ENSG00000144036.16 chr2:72741469:- YES_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTRACHROMOSOMAL[chr2:44.82Mb]"] GTF2H2--UPF2 1 0 0.33 0.00 ONLY_REF_SPLICE GTF2H2^ENSG00000145736.14 chr5:71065125:- UPF2^ENSG00000151461.20 chr10:12035441:- NO_LDAS 0.0011 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr10]"] GTF2B--CFD 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTF2B^ENSG00000137947.12 chr1:88860271:- CFD^ENSG00000197766.8 chr19:861808:+ NO_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr19]"] GTDC1--LSAMP 1 0 1.00 0.00 ONLY_REF_SPLICE GTDC1^ENSG00000121964.14 chr2:144208603:- LSAMP^ENSG00000185565.12 chr3:116444955:- NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr3]"] GRHPR--FAM153B 1 0 1.00 0.00 ONLY_REF_SPLICE GRHPR^ENSG00000137106.18 chr9:37426654:+ FAM153B^ENSG00000182230.12 chr5:176093195:+ YES_LDAS 0.0034 GT 1.5628 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr5]"] GPRIN3--CEP55 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPRIN3^ENSG00000185477.5 chr4:89249057:- CEP55^ENSG00000138180.16 chr10:93496767:+ YES_LDAS 0.0034 AT 1.7819 AC 1.4566 ["INTERCHROMOSOMAL[chr4--chr10]"] GPR68--NEUROD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPR68^ENSG00000119714.11 chr14:91253858:- NEUROD2^ENSG00000171532.5 chr17:39607877:- NO_LDAS 0.0034 GT 0.9056 AG 1.2310 ["INTERCHROMOSOMAL[chr14--chr17]"] GPR63--SRI-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPR63^ENSG00000112218.9 chr6:96796291:- SRI-AS1^ENSG00000254003.1 chr7:88218876:+ NO_LDAS 0.0034 GT 1.9329 AG 1.6402 ["INTERCHROMOSOMAL[chr6--chr7]"] GPN1--PROS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPN1^ENSG00000198522.14 chr2:27634924:+ PROS1^ENSG00000184500.16 chr3:93874152:- NO_LDAS 0.0034 GT 1.9329 AG 1.4256 ["INTERCHROMOSOMAL[chr2--chr3]"] GPC6--LSM14A 1 0 1.00 0.00 ONLY_REF_SPLICE GPC6^ENSG00000183098.11 chr13:93545421:+ LSM14A^ENSG00000257103.9 chr19:34194478:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr13--chr19]"] GPAT4--UBE2V2 1 0 1.00 0.00 ONLY_REF_SPLICE GPAT4^ENSG00000158669.11 chr8:41609955:+ UBE2V2^ENSG00000169139.12 chr8:48060682:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7968 ["INTRACHROMOSOMAL[chr8:6.38Mb]"] GOSR1--AC092338.3 1 0 1.00 0.00 ONLY_REF_SPLICE GOSR1^ENSG00000108587.16 chr17:30481257:+ AC092338.3^ENSG00000286808.1 chr16:22342938:- YES_LDAS 0.0034 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr16]"] GOPC--ZNF451 1 0 1.00 0.00 ONLY_REF_SPLICE GOPC^ENSG00000047932.14 chr6:117602004:- ZNF451^ENSG00000112200.17 chr6:57124734:+ NO_LDAS 0.0034 GT 1.8062 AG 1.7465 ["INTRACHROMOSOMAL[chr6:60.39Mb]"] GOLGA1--GTF2IRD2 1 0 0.33 0.00 INCL_NON_REF_SPLICE GOLGA1^ENSG00000136935.14 chr9:124880456:- GTF2IRD2^ENSG00000196275.14 chr7:74820023:- NO_LDAS 0.0011 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr9--chr7]"] GNPTAB--C12orf75 1 0 1.00 0.00 ONLY_REF_SPLICE GNPTAB^ENSG00000111670.16 chr12:101830559:- C12orf75^ENSG00000235162.9 chr12:105365807:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr12:3.40Mb]"] GNG10--CTCF 1 0 1.00 0.00 ONLY_REF_SPLICE GNG10^ENSG00000242616.4 chr9:111666946:+ CTCF^ENSG00000102974.16 chr16:67610824:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5628 ["INTERCHROMOSOMAL[chr9--chr16]"] GNB4--PLD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GNB4^ENSG00000114450.11 chr3:179426144:- PLD1^ENSG00000075651.16 chr3:171612407:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr3:7.59Mb]"] GNA12--RNPC3 1 0 1.00 0.00 ONLY_REF_SPLICE GNA12^ENSG00000146535.14 chr7:2794928:- RNPC3^ENSG00000185946.16 chr1:103555034:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr1]"] GMPS--PLCH1 1 0 1.00 0.00 ONLY_REF_SPLICE GMPS^ENSG00000163655.16 chr3:155870897:+ PLCH1^ENSG00000114805.18 chr3:155704264:- YES_LDAS 0.0034 GT 1.8062 AG 1.6895 ["INTRACHROMOSOMAL[chr3:0.13Mb]"] GMFG--LRFN1 1 0 1.00 0.00 ONLY_REF_SPLICE GMFG^ENSG00000130755.13 chr19:39329000:- LRFN1^ENSG00000128011.5 chr19:39318358:- YES_LDAS 0.0034 GT 1.8062 AG 1.7056 ["INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[7490]"] GMDS-DT--GMDS 1 0 1.00 0.00 ONLY_REF_SPLICE GMDS-DT^ENSG00000250903.9 chr6:2248926:+ GMDS^ENSG00000112699.11 chr6:2124731:- YES_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chr6:0.00Mb]","LOCAL_INVERSION:+:-:[113]"] GMDS-DT--EGLN1 1 0 1.00 0.00 ONLY_REF_SPLICE GMDS-DT^ENSG00000250903.9 chr6:2263684:+ EGLN1^ENSG00000135766.9 chr1:231374099:- YES_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr1]"] GLYCTK-AS1--AC007663.3 1 0 0.50 0.00 INCL_NON_REF_SPLICE GLYCTK-AS1^ENSG00000242797.3 chr3:52292907:- AC007663.3^ENSG00000273139.1 chr22:20320830:+ NO_LDAS 0.0017 GT 1.7232 AG 1.6729 ["INTERCHROMOSOMAL[chr3--chr22]"] GLI4--AC010624.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLI4^ENSG00000250571.7 chr8:143276616:+ AC010624.4^ENSG00000269540.1 chr19:50059150:- NO_LDAS 0.0034 GC 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr19]"] GLCCI1--PDS5B 1 0 0.33 0.00 INCL_NON_REF_SPLICE GLCCI1^ENSG00000106415.13 chr7:7969189:+ PDS5B^ENSG00000083642.19 chr13:32770358:+ NO_LDAS 0.0011 GT 1.2419 AG 1.7056 ["INTERCHROMOSOMAL[chr7--chr13]"] GJD3--AL512380.2 1 0 0.10 0.00 INCL_NON_REF_SPLICE GJD3^ENSG00000183153.7 chr17:40363091:- AL512380.2^ENSG00000283480.1 chr6:21595437:- NO_LDAS 0.0003 GC 1.1589 AG 1.8256 ["INTERCHROMOSOMAL[chr17--chr6]"] GIT2--NVL 1 0 1.00 0.00 ONLY_REF_SPLICE GIT2^ENSG00000139436.21 chr12:109980952:- NVL^ENSG00000143748.18 chr1:224268133:- NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr1]"] GIPR--LINC00910 1 0 1.00 0.00 INCL_NON_REF_SPLICE GIPR^ENSG00000010310.9 chr19:45669592:+ LINC00910^ENSG00000188825.14 chr17:43376455:- NO_LDAS 0.0034 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr19--chr17]"] GFPT2--CASP10 1 0 1.00 0.00 INCL_NON_REF_SPLICE GFPT2^ENSG00000131459.13 chr5:180352529:- CASP10^ENSG00000003400.15 chr2:201208112:+ NO_LDAS 0.0034 GT 1.1589 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr2]"] GFM1--FAM13A 1 0 1.00 0.00 ONLY_REF_SPLICE GFM1^ENSG00000168827.15 chr3:158646947:+ FAM13A^ENSG00000138640.15 chr4:88851183:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr4]"] GET1--ZNF875 1 0 1.00 0.00 ONLY_REF_SPLICE GET1^ENSG00000182093.16 chr21:39380486:+ ZNF875^ENSG00000181666.18 chr19:37347190:+ YES_LDAS 0.0034 GT 1.2867 AG 1.8256 ["INTERCHROMOSOMAL[chr21--chr19]"] GEN1--CRNN 1 0 1.00 0.00 INCL_NON_REF_SPLICE GEN1^ENSG00000178295.15 chr2:17761582:+ CRNN^ENSG00000143536.7 chr1:152410484:- NO_LDAS 0.0034 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr2--chr1]"] GDI2--HNRNPC 1 0 1.00 0.00 ONLY_REF_SPLICE GDI2^ENSG00000057608.17 chr10:5785142:- HNRNPC^ENSG00000092199.18 chr14:21234229:- YES_LDAS 0.0034 GT 1.9656 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr14]"] GDF7--SLC37A3 1 0 1.00 0.00 INCL_NON_REF_SPLICE GDF7^ENSG00000143869.7 chr2:20672760:+ SLC37A3^ENSG00000157800.18 chr7:140345970:- NO_LDAS 0.0034 GT 1.5546 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr7]"] GCOM1--FAM81A 1 0 1.00 0.00 ONLY_REF_SPLICE GCOM1^ENSG00000137878.17 chr15:57639545:+ FAM81A^ENSG00000157470.12 chr15:59507213:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTRACHROMOSOMAL[chr15:1.68Mb]"] GCNT4--IFI27 1 0 1.00 0.00 ONLY_REF_SPLICE GCNT4^ENSG00000176928.7 chr5:75047897:- IFI27^ENSG00000165949.12 chr14:94114851:+ NO_LDAS 0.0034 GT 1.7056 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr14]"] GCA--LYST 1 0 1.00 0.00 ONLY_REF_SPLICE GCA^ENSG00000115271.11 chr2:162344275:+ LYST^ENSG00000143669.14 chr1:235833667:- YES_LDAS 0.0034 GT 1.4716 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr1]"] GBP3--GPR107 1 0 1.00 0.00 INCL_NON_REF_SPLICE GBP3^ENSG00000117226.12 chr1:89014550:- GPR107^ENSG00000148358.20 chr9:130135111:+ NO_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr9]"] GBP1--CC2D2B 1 0 0.50 0.00 INCL_NON_REF_SPLICE GBP1^ENSG00000117228.11 chr1:89055113:- CC2D2B^ENSG00000188649.15 chr10:95938435:+ NO_LDAS 0.0017 GT 1.3996 AG 1.5628 ["INTERCHROMOSOMAL[chr1--chr10]"] GASK1A--BMP8A 1 0 0.50 0.00 INCL_NON_REF_SPLICE GASK1A^ENSG00000144649.9 chr3:43032773:+ BMP8A^ENSG00000183682.8 chr1:39527199:+ NO_LDAS 0.0017 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr1]"] GAREM1--AC092835.1 1 0 1.00 0.00 ONLY_REF_SPLICE GAREM1^ENSG00000141441.16 chr18:32470308:- AC092835.1^ENSG00000233757.6 chr2:95259076:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr2]"] GANC--UBXN4 1 0 1.00 0.00 INCL_NON_REF_SPLICE GANC^ENSG00000214013.9 chr15:42354453:+ UBXN4^ENSG00000144224.17 chr2:135748267:+ YES_LDAS 0.0034 GT 1.4716 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr2]"] GAN--BNC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GAN^ENSG00000261609.8 chr16:81377702:+ BNC2^ENSG00000173068.18 chr9:16437524:- YES_LDAS 0.0034 GT 1.5219 AG 1.9219 ["INTERCHROMOSOMAL[chr16--chr9]"] GALNT5--YTHDC1 1 0 1.00 0.00 ONLY_REF_SPLICE GALNT5^ENSG00000136542.9 chr2:157259536:+ YTHDC1^ENSG00000083896.13 chr4:68320205:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr4]"] GALNT11--LARP1B 1 0 1.00 0.00 ONLY_REF_SPLICE GALNT11^ENSG00000178234.13 chr7:152113398:+ LARP1B^ENSG00000138709.19 chr4:128074460:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr4]"] GALC--EMSY 1 0 1.00 0.00 ONLY_REF_SPLICE GALC^ENSG00000054983.17 chr14:87945553:- EMSY^ENSG00000158636.16 chr11:76523155:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr14--chr11]"] GAL3ST2--NGEF 1 0 1.00 0.00 ONLY_REF_SPLICE GAL3ST2^ENSG00000154252.12 chr2:241802036:+ NGEF^ENSG00000066248.15 chr2:232894916:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr2:8.76Mb]"] GABRP--RAB14 1 0 1.00 0.00 INCL_NON_REF_SPLICE GABRP^ENSG00000094755.17 chr5:170788652:+ RAB14^ENSG00000119396.11 chr9:121201835:- YES_LDAS 0.0034 GT 1.8062 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr9]"] GABRP--AARSD1 1 0 1.00 0.00 ONLY_REF_SPLICE GABRP^ENSG00000094755.17 chr5:170808752:+ AARSD1^ENSG00000266967.7 chr17:42957195:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr17]"] GABRB3--SCAMP1 1 0 1.00 0.00 ONLY_REF_SPLICE GABRB3^ENSG00000166206.15 chr15:26772402:- SCAMP1^ENSG00000085365.18 chr5:78418775:+ NO_LDAS 0.0034 GT 1.9656 AG 1.3383 ["INTERCHROMOSOMAL[chr15--chr5]"] GAB1--SMARCA5 1 0 1.00 0.00 ONLY_REF_SPLICE GAB1^ENSG00000109458.8 chr4:143337260:+ SMARCA5^ENSG00000153147.6 chr4:143517355:+ YES_LDAS 0.0034 GT 1.8256 AG 1.5219 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.04Mb]","NEIGHBORS[39134]"] GAB1--NR3C2 1 0 1.00 0.00 ONLY_REF_SPLICE GAB1^ENSG00000109458.8 chr4:143337260:+ NR3C2^ENSG00000151623.15 chr4:148436862:- YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTRACHROMOSOMAL[chr4:4.60Mb]"] FXR2--AC090819.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FXR2^ENSG00000129245.12 chr17:7614839:- AC090819.1^ENSG00000253107.1 chr8:110556290:+ YES_LDAS 0.0034 GT 1.5058 AG 1.5058 ["INTERCHROMOSOMAL[chr17--chr8]"] FUNDC2--F8 1 0 1.00 0.00 ONLY_REF_SPLICE FUNDC2^ENSG00000165775.18 chrX:155046584:+ F8^ENSG00000185010.15 chrX:154999600:- YES_LDAS 0.0034 GT 1.4716 AG 1.8892 ["INTRACHROMOSOMAL[chrX:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[960]"] FTX--TMEM108 1 0 1.00 0.00 ONLY_REF_SPLICE FTX^ENSG00000230590.11 chrX:74232489:- TMEM108^ENSG00000144868.14 chr3:133229266:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chrX--chr3]"] FTX--ANGPTL4 1 0 1.00 0.00 INCL_NON_REF_SPLICE FTX^ENSG00000230590.11 chrX:74031695:- ANGPTL4^ENSG00000167772.12 chr19:8374212:+ YES_LDAS 0.0034 AT 1.8295 AC 1.9329 ["INTERCHROMOSOMAL[chrX--chr19]"] FTSJ3--LLGL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FTSJ3^ENSG00000108592.17 chr17:63823817:- LLGL1^ENSG00000131899.11 chr17:18241290:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7056 ["INTRACHROMOSOMAL[chr17:45.57Mb]"] FTSJ3--EMILIN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FTSJ3^ENSG00000108592.17 chr17:63826056:- EMILIN3^ENSG00000183798.5 chr20:41360321:- NO_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr20]"] FSD1L--FNTA 1 0 1.00 0.00 INCL_NON_REF_SPLICE FSD1L^ENSG00000106701.13 chr9:105547264:+ FNTA^ENSG00000168522.13 chr8:43080409:+ NO_LDAS 0.0034 GT 0.9056 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr8]"] FSCN2--SCN4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE FSCN2^ENSG00000186765.12 chr17:81528820:+ SCN4A^ENSG00000007314.12 chr17:63941119:- NO_LDAS 0.0034 AT 1.7968 AC 1.8062 ["INTRACHROMOSOMAL[chr17:17.56Mb]"] FRMD3--PGM5 1 0 1.00 0.00 ONLY_REF_SPLICE FRMD3^ENSG00000172159.16 chr9:83538085:- PGM5^ENSG00000154330.13 chr9:68465093:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9219 ["INTRACHROMOSOMAL[chr9:14.71Mb]"] FP671120.2--CENPX 1 0 1.00 0.00 INCL_NON_REF_SPLICE FP671120.2^ENSG00000277437.1 chr21:8208929:+ CENPX^ENSG00000169689.15 chr17:82019372:- YES_LDAS 0.0034 GT 1.6729 AG 1.4295 ["INTERCHROMOSOMAL[chr21--chr17]"] FOXJ3--NXF4 1 0 1.00 0.00 INCL_NON_REF_SPLICE FOXJ3^ENSG00000198815.9 chr1:42335059:- NXF4^ENSG00000196970.8 chrX:102568073:+ NO_LDAS 0.0034 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chrX]"] FOXJ3--LRIF1 1 0 1.00 0.00 ONLY_REF_SPLICE FOXJ3^ENSG00000198815.9 chr1:42311050:- LRIF1^ENSG00000121931.16 chr1:110950123:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr1:68.61Mb]"] FNDC3A--TDRD3 1 0 1.00 0.00 ONLY_REF_SPLICE FNDC3A^ENSG00000102531.16 chr13:48976917:+ TDRD3^ENSG00000083544.16 chr13:60439688:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr13:11.19Mb]"] FNDC3A--RB1 1 0 1.00 0.00 ONLY_REF_SPLICE FNDC3A^ENSG00000102531.16 chr13:49145935:+ RB1^ENSG00000139687.16 chr13:48307280:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8256 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.38Mb]"] FNBP1L--ABCD3 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1L^ENSG00000137942.18 chr1:93448305:+ ABCD3^ENSG00000117528.14 chr1:94458607:+ NO_LDAS 0.0034 GT 1.7232 AG 1.3383 ["INTRACHROMOSOMAL[chr1:0.86Mb]"] FN3KRP--SNTB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE FN3KRP^ENSG00000141560.15 chr17:82722886:+ SNTB2^ENSG00000168807.16 chr16:69307856:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chr16]"] FLVCR2--ASIC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FLVCR2^ENSG00000119686.10 chr14:75639433:+ ASIC3^ENSG00000213199.8 chr7:151050646:+ NO_LDAS 0.0034 GT 1.8892 AG 1.4716 ["INTERCHROMOSOMAL[chr14--chr7]"] FLRT2--GIMAP8 1 0 1.00 0.00 INCL_NON_REF_SPLICE FLRT2^ENSG00000185070.11 chr14:85626840:+ GIMAP8^ENSG00000171115.4 chr7:150474222:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr7]"] FKBP5--CCND2 1 0 1.00 0.00 ONLY_REF_SPLICE FKBP5^ENSG00000096060.15 chr6:35688804:- CCND2^ENSG00000118971.9 chr12:4288842:+ YES_LDAS 0.0034 GT 1.3996 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr12]"] FIP1L1--CDKL5 1 0 1.00 0.00 INCL_NON_REF_SPLICE FIP1L1^ENSG00000145216.16 chr4:53382335:+ CDKL5^ENSG00000008086.13 chrX:18588040:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chrX]"] FHAD1--TUT4 1 0 1.00 0.00 INCL_NON_REF_SPLICE FHAD1^ENSG00000142621.19 chr1:15251877:+ TUT4^ENSG00000134744.14 chr1:52529873:- YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chr1:37.01Mb]"] FGGY--C11orf80 1 0 1.00 0.00 INCL_NON_REF_SPLICE FGGY^ENSG00000172456.18 chr1:59378837:+ C11orf80^ENSG00000173715.18 chr11:66815758:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr11]"] FGD3--C9orf85 1 0 1.00 0.00 ONLY_REF_SPLICE FGD3^ENSG00000127084.19 chr9:92976709:+ C9orf85^ENSG00000155621.15 chr9:71971505:+ NO_LDAS 0.0034 GT 1.5628 AG 1.6895 ["INTRACHROMOSOMAL[chr9:20.96Mb]"] FEZ2--AL158175.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FEZ2^ENSG00000171055.15 chr2:36581290:- AL158175.1^ENSG00000283072.3 chr20:22728446:+ NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr20]"] FCHSD2--ARHGAP10 1 0 1.00 0.00 ONLY_REF_SPLICE FCHSD2^ENSG00000137478.15 chr11:72984088:- ARHGAP10^ENSG00000071205.12 chr4:147906638:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5656 ["INTERCHROMOSOMAL[chr11--chr4]"] FCGR3A--DCAKD 1 0 0.50 0.00 INCL_NON_REF_SPLICE FCGR3A^ENSG00000203747.12 chr1:161542996:- DCAKD^ENSG00000172992.12 chr17:45033904:- NO_LDAS 0.0017 GT 1.7968 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr17]"] FBXW12--RASAL3 1 0 1.00 0.00 ONLY_REF_SPLICE FBXW12^ENSG00000164049.14 chr3:48397382:+ RASAL3^ENSG00000105122.13 chr19:15461607:- NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr19]"] FBXW11--STIM2 1 0 1.00 0.00 ONLY_REF_SPLICE FBXW11^ENSG00000072803.18 chr5:172006458:- STIM2^ENSG00000109689.19 chr4:26995379:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr4]"] FBXW11--AC139795.1 1 0 1.00 0.00 ONLY_REF_SPLICE FBXW11^ENSG00000072803.18 chr5:172006458:- AC139795.1^ENSG00000246596.7 chr5:177632738:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr5:5.61Mb]"] FBXO7--ATXN10 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO7^ENSG00000100225.18 chr22:32475124:+ ATXN10^ENSG00000130638.17 chr22:45729425:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr22:13.17Mb]"] FBXO34--ATL1 1 0 1.00 0.00 ONLY_REF_SPLICE FBXO34^ENSG00000178974.11 chr14:55271537:+ ATL1^ENSG00000198513.13 chr14:50587831:+ YES_LDAS 0.0034 GT 1.3710 AG 1.8256 ["INTRACHROMOSOMAL[chr14:4.64Mb]"] FBXL5--ARPIN 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBXL5^ENSG00000118564.15 chr4:15612266:- ARPIN^ENSG00000242498.8 chr15:89897457:- YES_LDAS 0.0034 GT 1.9219 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr15]"] FBXL4--LCA5 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBXL4^ENSG00000112234.9 chr6:98874431:- LCA5^ENSG00000135338.14 chr6:79493750:- NO_LDAS 0.0034 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr6:19.33Mb]"] FBLN7--GPN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBLN7^ENSG00000144152.13 chr2:112185313:+ GPN3^ENSG00000111231.9 chr12:110465214:- NO_LDAS 0.0034 GT 1.7465 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr12]"] FBLN7--CYTOR 1 0 0.50 0.00 ONLY_REF_SPLICE FBLN7^ENSG00000144152.13 chr2:112185339:+ CYTOR^ENSG00000222041.11 chr2:87583258:+ YES_LDAS 0.0017 GT 1.9899 AG 1.7968 ["INTRACHROMOSOMAL[chr2:24.50Mb]"] FAXC--ASCC3 1 0 1.00 0.00 ONLY_REF_SPLICE FAXC^ENSG00000146267.12 chr6:99342898:- ASCC3^ENSG00000112249.14 chr6:100805880:- YES_LDAS 0.0034 GT 1.9899 AG 1.9219 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr6:1.16Mb]"] FANK1--MXI1 1 0 1.00 0.00 ONLY_REF_SPLICE FANK1^ENSG00000203780.12 chr10:125896655:+ MXI1^ENSG00000119950.21 chr10:110228189:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTRACHROMOSOMAL[chr10:15.61Mb]"] FAM66D--ALG1L10P 1 0 0.20 0.00 INCL_NON_REF_SPLICE FAM66D^ENSG00000255052.5 chr8:12177517:+ ALG1L10P^ENSG00000254016.3 chr12:8227735:+ YES_LDAS 0.0007 GT 1.5546 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr12]"] FAM234A--IPO9 1 0 1.00 0.00 ONLY_REF_SPLICE FAM234A^ENSG00000167930.17 chr16:254681:+ IPO9^ENSG00000198700.10 chr1:201863448:+ YES_LDAS 0.0034 GT 1.9656 AG 1.2729 ["INTERCHROMOSOMAL[chr16--chr1]"] FAM186A--DNAJC14 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM186A^ENSG00000185958.10 chr12:50354169:- DNAJC14^ENSG00000135392.19 chr12:55828160:- YES_LDAS 0.0034 GT 1.5628 AG 1.5656 ["INTRACHROMOSOMAL[chr12:5.42Mb]"] FAM177A1--ECI2 1 0 1.00 0.00 ONLY_REF_SPLICE FAM177A1^ENSG00000151327.13 chr14:35046628:+ ECI2^ENSG00000198721.13 chr6:4117451:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr6]"] FAM172A--SLC36A4 1 0 1.00 0.00 ONLY_REF_SPLICE FAM172A^ENSG00000113391.19 chr5:94111511:- SLC36A4^ENSG00000180773.15 chr11:93185814:- YES_LDAS 0.0034 GT 1.6729 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr11]"] FAM171B--UBXN4 1 0 1.00 0.00 ONLY_REF_SPLICE FAM171B^ENSG00000144369.13 chr2:186694411:+ UBXN4^ENSG00000144224.17 chr2:135748267:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chr2:50.91Mb]"] FAM162A--PARG 1 0 0.50 0.00 ONLY_REF_SPLICE FAM162A^ENSG00000114023.15 chr3:122384299:+ PARG^ENSG00000227345.9 chr10:49869555:- YES_LDAS 0.0017 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr10]"] FAM157C--ZNF276 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM157C^ENSG00000260528.5 chr16:90163954:+ ZNF276^ENSG00000158805.12 chr16:89727279:+ NO_LDAS 0.0034 GT 1.7819 AG 1.6729 ["INTRACHROMOSOMAL[chr16:0.36Mb]"] FAM157A--SEPTIN14 1 0 0.33 0.00 ONLY_REF_SPLICE FAM157A^ENSG00000236438.7 chr3:198216262:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0011 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr7]"] FAM133B--RHOH 1 0 1.00 0.00 ONLY_REF_SPLICE FAM133B^ENSG00000234545.8 chr7:92590268:- RHOH^ENSG00000168421.13 chr4:40242714:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr4]"] FAM120B--IRF2 1 0 1.00 0.00 ONLY_REF_SPLICE FAM120B^ENSG00000112584.14 chr6:170330550:+ IRF2^ENSG00000168310.11 chr4:184429070:- YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr4]"] FABP5P13--FABP5P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE FABP5P13^ENSG00000234958.6 chrX:523874:- FABP5P2^ENSG00000236044.1 chr13:51966789:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9329 ["INTERCHROMOSOMAL[chrY--chr13]"] F8--B3GNT2 1 0 1.00 0.00 ONLY_REF_SPLICE F8^ENSG00000185010.15 chrX:154886134:- B3GNT2^ENSG00000170340.11 chr2:62222212:+ NO_LDAS 0.0034 GT 1.8256 AG 1.5301 ["INTERCHROMOSOMAL[chrX--chr2]"] F2RL3--FAM71E1 1 0 1.00 0.00 INCL_NON_REF_SPLICE F2RL3^ENSG00000127533.4 chr19:16889635:+ FAM71E1^ENSG00000142530.11 chr19:50475394:- NO_LDAS 0.0034 GT 1.9899 AG 1.6895 ["INTRACHROMOSOMAL[chr19:33.57Mb]"] F13A1--AC114954.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE F13A1^ENSG00000124491.16 chr6:6318535:- AC114954.1^ENSG00000248148.1 chr5:45098465:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr5]"] EXTL3--SIX3 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXTL3^ENSG00000012232.9 chr8:28701640:+ SIX3^ENSG00000138083.5 chr2:44942289:+ NO_LDAS 0.0034 GT 0.9183 AG 1.2310 ["INTERCHROMOSOMAL[chr8--chr2]"] EXOSC2--TOP2A 1 0 1.00 0.00 ONLY_REF_SPLICE EXOSC2^ENSG00000130713.16 chr9:130700935:+ TOP2A^ENSG00000131747.15 chr17:40403054:- YES_LDAS 0.0034 GT 1.6729 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr17]"] EXOSC10--KBTBD13 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOSC10^ENSG00000171824.14 chr1:11076842:- KBTBD13^ENSG00000234438.5 chr15:65079558:+ NO_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr15]"] EXOSC10--ABCC9 1 0 1.00 0.00 ONLY_REF_SPLICE EXOSC10^ENSG00000171824.14 chr1:11087448:- ABCC9^ENSG00000069431.12 chr12:21818251:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr12]"] EXOSC1--GPN2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOSC1^ENSG00000171311.13 chr10:97437191:- GPN2^ENSG00000142751.15 chr1:26876683:- NO_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr1]"] EXOG--PDCD6IP 1 0 1.00 0.00 ONLY_REF_SPLICE EXOG^ENSG00000157036.13 chr3:38497778:+ PDCD6IP^ENSG00000170248.15 chr3:33812072:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7056 ["INTRACHROMOSOMAL[chr3:4.63Mb]"] EXOC5--FUT8 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC5^ENSG00000070367.16 chr14:57229734:- FUT8^ENSG00000033170.17 chr14:65629492:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr14:8.14Mb]"] EXOC5--FANCL 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC5^ENSG00000070367.16 chr14:57268622:- FANCL^ENSG00000115392.12 chr2:58204226:- NO_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr2]"] EXOC3L4--ARF5 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOC3L4^ENSG00000205436.7 chr14:103102611:+ ARF5^ENSG00000004059.11 chr7:127590972:+ NO_LDAS 0.0034 GT 1.6402 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr7]"] EXOC2--DDAH1 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC2^ENSG00000112685.14 chr6:693019:- DDAH1^ENSG00000153904.21 chr1:85358847:- YES_LDAS 0.0034 GT 1.6729 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr1]"] EXOC1L--SCOC 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOC1L^ENSG00000250821.3 chr4:55820028:+ SCOC^ENSG00000153130.18 chr4:140379612:+ NO_LDAS 0.0034 GT 1.7056 AG 1.7056 ["INTRACHROMOSOMAL[chr4:84.42Mb]"] EVI5--PRKD1 1 0 1.00 0.00 ONLY_REF_SPLICE EVI5^ENSG00000067208.14 chr1:92605307:- PRKD1^ENSG00000184304.16 chr14:29725674:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr14]"] EVI5--PARP14 1 0 1.00 0.00 ONLY_REF_SPLICE EVI5^ENSG00000067208.14 chr1:92605307:- PARP14^ENSG00000173193.15 chr3:122727812:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] ETV5--ST6GAL1 1 0 1.00 0.00 ONLY_REF_SPLICE ETV5^ENSG00000244405.8 chr3:186057075:- ST6GAL1^ENSG00000073849.16 chr3:186963785:+ YES_LDAS 0.0034 GT 1.6895 AG 1.5058 ["INTRACHROMOSOMAL[chr3:0.82Mb]"] ETV5--RACK1 1 0 1.00 0.00 ONLY_REF_SPLICE ETV5^ENSG00000244405.8 chr3:186064417:- RACK1^ENSG00000204628.12 chr5:181242345:- YES_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr5]"] ETV4--POFUT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ETV4^ENSG00000175832.13 chr17:43528491:- POFUT2^ENSG00000186866.17 chr21:45282398:- NO_LDAS 0.0034 GT 1.6729 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr21]"] ESRP1--HMGB2 1 0 1.00 0.00 ONLY_REF_SPLICE ESRP1^ENSG00000104413.18 chr8:94692827:+ HMGB2^ENSG00000164104.12 chr4:173332995:- YES_LDAS 0.0034 GT 1.9899 AG 1.5628 ["INTERCHROMOSOMAL[chr8--chr4]"] ESRP1--DPY19L4 1 0 1.00 0.00 ONLY_REF_SPLICE ESRP1^ENSG00000104413.18 chr8:94678371:+ DPY19L4^ENSG00000156162.16 chr8:94726331:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[12237]"] ERV3-1--FUT8 1 0 1.00 0.00 ONLY_REF_SPLICE ERV3-1^ENSG00000213462.5 chr7:65006541:- FUT8^ENSG00000033170.17 chr14:65615978:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr7--chr14]"] ERLEC1--RBBP7 1 0 1.00 0.00 INCL_NON_REF_SPLICE ERLEC1^ENSG00000068912.14 chr2:53813073:+ RBBP7^ENSG00000102054.18 chrX:16869200:- NO_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr2--chrX]"] ERBIN--SIL1 1 0 1.00 0.00 ONLY_REF_SPLICE ERBIN^ENSG00000112851.15 chr5:65926806:+ SIL1^ENSG00000120725.13 chr5:139127853:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr5:72.86Mb]"] EPSTI1--SKAP1 1 0 1.00 0.00 ONLY_REF_SPLICE EPSTI1^ENSG00000133106.15 chr13:42953948:- SKAP1^ENSG00000141293.16 chr17:48189500:- YES_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTERCHROMOSOMAL[chr13--chr17]"] EPHX1--ZNF362 1 0 0.50 0.00 INCL_NON_REF_SPLICE EPHX1^ENSG00000143819.13 chr1:225845444:+ ZNF362^ENSG00000160094.15 chr1:33281663:+ NO_LDAS 0.0017 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr1:192.51Mb]"] EPHB2--AC005726.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE EPHB2^ENSG00000133216.17 chr1:22920386:+ AC005726.2^ENSG00000264044.1 chr17:28633897:+ NO_LDAS 0.0034 GC 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr17]"] EPHA3--PRPF40B 1 0 1.00 0.00 INCL_NON_REF_SPLICE EPHA3^ENSG00000044524.11 chr3:89395847:+ PRPF40B^ENSG00000110844.14 chr12:49642352:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr12]"] EPG5--UBTD2 1 0 1.00 0.00 ONLY_REF_SPLICE EPG5^ENSG00000152223.15 chr18:45857853:- UBTD2^ENSG00000168246.6 chr5:172234358:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr5]"] EOGT--ARL16 1 0 1.00 0.00 INCL_NON_REF_SPLICE EOGT^ENSG00000163378.14 chr3:69012710:- ARL16^ENSG00000214087.9 chr17:81683592:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr17]"] ENTPD5--PIGS 1 0 1.00 0.00 INCL_NON_REF_SPLICE ENTPD5^ENSG00000187097.13 chr14:73963810:- PIGS^ENSG00000087111.21 chr17:28554884:- NO_LDAS 0.0034 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr14--chr17]"] ENTPD1-AS1--MAX 1 0 1.00 0.00 INCL_NON_REF_SPLICE ENTPD1-AS1^ENSG00000226688.7 chr10:95872382:- MAX^ENSG00000125952.20 chr14:65102451:- NO_LDAS 0.0034 GT 1.5656 AG 1.2729 ["INTERCHROMOSOMAL[chr10--chr14]"] ENTPD1--SRP54 1 0 1.00 0.00 ONLY_REF_SPLICE ENTPD1^ENSG00000138185.20 chr10:95864861:+ SRP54^ENSG00000100883.13 chr14:35018692:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr14]"] ENTPD1--SORBS1 1 0 1.00 0.00 ONLY_REF_SPLICE ENTPD1^ENSG00000138185.20 chr10:95864861:+ SORBS1^ENSG00000095637.22 chr10:95384285:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr10:0.15Mb]"] ENPP4--RNF14 1 0 1.00 0.00 ONLY_REF_SPLICE ENPP4^ENSG00000001561.7 chr6:46130189:+ RNF14^ENSG00000013561.18 chr5:141980123:+ YES_LDAS 0.0034 GT 1.5628 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr5]"] ENPP4--CDC5L 1 0 1.00 0.00 ONLY_REF_SPLICE ENPP4^ENSG00000001561.7 chr6:46130189:+ CDC5L^ENSG00000096401.8 chr6:44445655:+ YES_LDAS 0.0034 GT 1.5628 AG 1.8892 ["INTRACHROMOSOMAL[chr6:1.68Mb]"] ENOSF1--TYSND1 1 0 1.00 0.00 ONLY_REF_SPLICE ENOSF1^ENSG00000132199.20 chr18:683246:- TYSND1^ENSG00000156521.14 chr10:70143972:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr10]"] EMC3--IFT46 1 0 1.00 0.00 ONLY_REF_SPLICE EMC3^ENSG00000125037.12 chr3:9973628:- IFT46^ENSG00000118096.10 chr11:118559864:- NO_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr11]"] ELP3--FLJ46284 1 0 0.20 0.00 INCL_NON_REF_SPLICE ELP3^ENSG00000134014.17 chr8:28106779:+ FLJ46284^ENSG00000248858.7 chr8:92713355:- NO_LDAS 0.0007 GT 1.6895 AG 1.5656 ["INTRACHROMOSOMAL[chr8:64.51Mb]"] ELP2--PBX4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ELP2^ENSG00000134759.14 chr18:36170200:+ PBX4^ENSG00000105717.14 chr19:19561903:- NO_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr18--chr19]"] ELMO1--IKZF1 1 0 1.00 0.00 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:36887560:- IKZF1^ENSG00000185811.19 chr7:50319048:+ YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTRACHROMOSOMAL[chr7:12.85Mb]"] ELMO1--CTC1 1 0 1.00 0.00 ONLY_REF_SPLICE ELMO1^ENSG00000155849.16 chr7:37448675:- CTC1^ENSG00000178971.16 chr17:8243148:- YES_LDAS 0.0034 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr17]"] ELAC1--MPDZ 1 0 1.00 0.00 ONLY_REF_SPLICE ELAC1^ENSG00000141642.9 chr18:50974561:+ MPDZ^ENSG00000107186.17 chr9:13223710:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr9]"] EIF5AL1--ALYREF 1 0 0.50 0.00 INCL_NON_REF_SPLICE EIF5AL1^ENSG00000253626.4 chr10:79512870:+ ALYREF^ENSG00000183684.8 chr17:81891454:- YES_LDAS 0.0017 GT 1.9899 AG 1.2310 ["INTERCHROMOSOMAL[chr10--chr17]"] EIF5A--USP13 1 0 0.25 0.00 INCL_NON_REF_SPLICE EIF5A^ENSG00000132507.18 chr17:7311651:+ USP13^ENSG00000058056.10 chr3:179721408:+ NO_LDAS 0.0008 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr3]"] EIF3M--ROBO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF3M^ENSG00000149100.13 chr11:32587144:+ ROBO1^ENSG00000169855.20 chr3:78746756:- NO_LDAS 0.0034 GT 1.4295 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr3]"] EIF3J-DT--EIF5 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3J-DT^ENSG00000179523.5 chr15:44535263:- EIF5^ENSG00000100664.11 chr14:103339639:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr14]"] EIF3E--RAB9A 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3E^ENSG00000104408.11 chr8:108248613:- RAB9A^ENSG00000123595.8 chrX:13703814:+ YES_LDAS 0.0034 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chrX]"] EIF3E--EMC2 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3E^ENSG00000104408.11 chr8:108248613:- EMC2^ENSG00000104412.8 chr8:108469826:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr8:0.00Mb]","LOCAL_INVERSION:-:+:[105]"] EIF3D--KRT18P61 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF3D^ENSG00000100353.18 chr22:36511503:- KRT18P61^ENSG00000267083.1 chr17:60810821:+ NO_LDAS 0.0034 GT 0.9710 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr17]"] EIF3D--C1QTNF6 1 0 1.00 0.00 ONLY_REF_SPLICE EIF3D^ENSG00000100353.18 chr22:36524596:- C1QTNF6^ENSG00000133466.14 chr22:37190928:- NO_LDAS 0.0034 GT 1.9899 AG 1.7056 ["INTRACHROMOSOMAL[chr22:0.65Mb]"] EIF3CL--NPIPB13 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF3CL^ENSG00000205609.13 chr16:28379729:- NPIPB13^ENSG00000198064.13 chr16:30245853:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr16:1.82Mb]"] EIF2B1--EFCAB12 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF2B1^ENSG00000111361.13 chr12:123627040:- EFCAB12^ENSG00000172771.12 chr3:129403738:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr3]"] EIF1B-AS1--LSM11 1 0 1.00 0.00 ONLY_REF_SPLICE EIF1B-AS1^ENSG00000280739.3 chr3:40301237:- LSM11^ENSG00000155858.6 chr5:157751390:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr5]"] EIF1B-AS1--GABARAPL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EIF1B-AS1^ENSG00000280739.3 chr3:40293868:- GABARAPL1^ENSG00000139112.11 chr12:10218117:+ NO_LDAS 0.0034 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr12]"] EHD4--AC092127.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EHD4^ENSG00000103966.11 chr15:41919540:- AC092127.1^ENSG00000260417.1 chr16:85593563:+ NO_LDAS 0.0034 AT 1.9329 AC 1.1033 ["INTERCHROMOSOMAL[chr15--chr16]"] EHBP1--UBXN2B 1 0 1.00 0.00 ONLY_REF_SPLICE EHBP1^ENSG00000115504.15 chr2:62831158:+ UBXN2B^ENSG00000215114.10 chr8:58447389:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr8]"] EGFEM1P--BCHE 1 0 1.00 0.00 ONLY_REF_SPLICE EGFEM1P^ENSG00000206120.11 chr3:168250027:+ BCHE^ENSG00000114200.10 chr3:165786311:- YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr3:2.41Mb]"] EFL1--AC243562.2 1 0 0.10 0.00 INCL_NON_REF_SPLICE EFL1^ENSG00000140598.15 chr15:82214717:- AC243562.2^ENSG00000259683.1 chr15:84389732:+ YES_LDAS 0.0003 GT 1.9086 AG 1.5058 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr15:2.13Mb]"] EFL1--AC008013.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE EFL1^ENSG00000140598.15 chr15:82220078:- AC008013.1^ENSG00000226472.8 chr12:30978583:- NO_LDAS 0.0017 GT 1.4295 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr12]"] EFCAB6--DLG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EFCAB6^ENSG00000186976.15 chr22:43554573:- DLG1^ENSG00000075711.21 chr3:197297683:- NO_LDAS 0.0034 GT 1.9899 AG 1.3996 ["INTERCHROMOSOMAL[chr22--chr3]"] EFCAB2--KRAS 1 0 1.00 0.00 ONLY_REF_SPLICE EFCAB2^ENSG00000203666.12 chr1:245017326:+ KRAS^ENSG00000133703.13 chr12:25227412:- NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr12]"] EDF1--NSUN5 1 0 0.50 0.00 INCL_NON_REF_SPLICE EDF1^ENSG00000107223.13 chr9:136862762:- NSUN5^ENSG00000130305.17 chr7:73303529:- YES_LDAS 0.0017 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr9--chr7]"] EDEM2--EIF6 1 0 1.00 0.00 ONLY_REF_SPLICE EDEM2^ENSG00000088298.13 chr20:35142373:- EIF6^ENSG00000242372.9 chr20:35280829:- YES_LDAS 0.0034 GT 1.7232 AG 1.8062 ["INTRACHROMOSOMAL[chr20:0.13Mb]"] EDEM1--PANK4 1 0 1.00 0.00 INCL_NON_REF_SPLICE EDEM1^ENSG00000134109.11 chr3:5213467:+ PANK4^ENSG00000157881.16 chr1:2525930:- NO_LDAS 0.0034 GT 1.4295 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr1]"] ECHS1--BEND3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ECHS1^ENSG00000127884.5 chr10:133362736:- BEND3^ENSG00000178409.14 chr6:107069927:- YES_LDAS 0.0034 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr10--chr6]"] EBPL--KPNA3 1 0 1.00 0.00 ONLY_REF_SPLICE EBPL^ENSG00000123179.14 chr13:49691254:- KPNA3^ENSG00000102753.10 chr13:49746993:- YES_LDAS 0.0034 GT 1.8256 AG 1.8295 ["Klijn_CellLines","INTRACHROMOSOMAL[chr13:0.01Mb]","LOCAL_REARRANGEMENT:-:[7834]"] EBNA1BP2--ACOT9 1 0 1.00 0.00 ONLY_REF_SPLICE EBNA1BP2^ENSG00000117395.13 chr1:43211450:- ACOT9^ENSG00000123130.17 chrX:23706739:- NO_LDAS 0.0034 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr1--chrX]"] DYRK4--ENDOV 1 0 1.00 0.00 INCL_NON_REF_SPLICE DYRK4^ENSG00000010219.13 chr12:4612586:+ ENDOV^ENSG00000173818.17 chr17:80429855:+ NO_LDAS 0.0034 AT 1.7465 AC 1.3710 ["INTERCHROMOSOMAL[chr12--chr17]"] DYNC1LI2--LINC00111 1 0 1.00 0.00 INCL_NON_REF_SPLICE DYNC1LI2^ENSG00000135720.13 chr16:66751273:- LINC00111^ENSG00000227702.1 chr21:41688418:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr21]"] DUSP2--RNF34 1 0 1.00 0.00 INCL_NON_REF_SPLICE DUSP2^ENSG00000158050.5 chr2:96143831:- RNF34^ENSG00000170633.16 chr12:121417612:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr12]"] DUSP14--RTKN 1 0 1.00 0.00 INCL_NON_REF_SPLICE DUSP14^ENSG00000276023.5 chr17:37510340:+ RTKN^ENSG00000114993.17 chr2:74427573:- NO_LDAS 0.0034 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr17--chr2]"] DTNB--CPED1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DTNB^ENSG00000138101.19 chr2:25639204:- CPED1^ENSG00000106034.18 chr7:121267215:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr7]"] DTNB--BABAM2 1 0 1.00 0.00 ONLY_REF_SPLICE DTNB^ENSG00000138101.19 chr2:25576838:- BABAM2^ENSG00000158019.21 chr2:28129271:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr2:2.22Mb]"] DSTN--XRN2 1 0 1.00 0.00 ONLY_REF_SPLICE DSTN^ENSG00000125868.16 chr20:17570211:+ XRN2^ENSG00000088930.8 chr20:21381994:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr20:3.69Mb]"] DSG2--LRMDA 1 0 1.00 0.00 ONLY_REF_SPLICE DSG2^ENSG00000046604.13 chr18:31498296:+ LRMDA^ENSG00000148655.15 chr10:76036008:+ YES_LDAS 0.0034 GT 1.5219 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr10]"] DROSHA--TMUB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DROSHA^ENSG00000113360.17 chr5:31515149:- TMUB2^ENSG00000168591.16 chr17:44190525:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr17]"] DROSHA--NR3C1 1 0 1.00 0.00 ONLY_REF_SPLICE DROSHA^ENSG00000113360.17 chr5:31448547:- NR3C1^ENSG00000113580.15 chr5:143314168:- YES_LDAS 0.0034 GT 1.7232 AG 1.7465 ["INTRACHROMOSOMAL[chr5:111.75Mb]"] DRG1--SMUG1 1 0 1.00 0.00 ONLY_REF_SPLICE DRG1^ENSG00000185721.13 chr22:31508376:+ SMUG1^ENSG00000123415.15 chr12:54188596:- NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr22--chr12]"] DRC3--PDE7A 1 0 1.00 0.00 ONLY_REF_SPLICE DRC3^ENSG00000171962.18 chr17:18004494:+ PDE7A^ENSG00000205268.11 chr8:65747803:- NO_LDAS 0.0034 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr8]"] DQX1--GFOD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DQX1^ENSG00000144045.14 chr2:74522580:- GFOD1^ENSG00000145990.11 chr6:13359942:- YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr6]"] DPY30--EMB 1 0 1.00 0.00 ONLY_REF_SPLICE DPY30^ENSG00000162961.14 chr2:31943302:- EMB^ENSG00000170571.12 chr5:50411383:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr5]"] DPP4--BACH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DPP4^ENSG00000197635.11 chr2:162027226:- BACH1^ENSG00000156273.16 chr21:29342399:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5329 ["INTERCHROMOSOMAL[chr2--chr21]"] DPP10--UGP2 1 0 1.00 0.00 ONLY_REF_SPLICE DPP10^ENSG00000175497.17 chr2:115343912:+ UGP2^ENSG00000169764.16 chr2:63856306:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr2:50.55Mb]"] DOLK--SEC23B 1 0 1.00 0.00 INCL_NON_REF_SPLICE DOLK^ENSG00000175283.8 chr9:128946291:- SEC23B^ENSG00000101310.17 chr20:18510822:+ NO_LDAS 0.0034 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr20]"] DOCK7--SPATA6 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK7^ENSG00000116641.18 chr1:62688227:- SPATA6^ENSG00000132122.12 chr1:48453131:- YES_LDAS 0.0034 GT 1.8062 AG 1.9899 ["INTRACHROMOSOMAL[chr1:13.98Mb]"] DOCK2--FBXW11 1 0 1.00 0.00 ONLY_REF_SPLICE DOCK2^ENSG00000134516.18 chr5:169840852:+ FBXW11^ENSG00000072803.18 chr5:171914405:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr5:1.78Mb]"] DNPEP--SOX9-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DNPEP^ENSG00000123992.20 chr2:219374301:- SOX9-AS1^ENSG00000234899.11 chr17:72089866:- NO_LDAS 0.0017 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr17]"] DNMT1--OR8K4P 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNMT1^ENSG00000130816.17 chr19:10154662:- OR8K4P^ENSG00000254947.1 chr11:56143340:- NO_LDAS 0.0034 GT 1.5301 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr11]"] DNASE2B--ELMOD3 1 0 1.00 0.00 ONLY_REF_SPLICE DNASE2B^ENSG00000137976.8 chr1:84412546:+ ELMOD3^ENSG00000115459.18 chr2:85369739:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr2]"] DNAJC4--DOK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJC4^ENSG00000110011.13 chr11:64234056:+ DOK3^ENSG00000146094.16 chr5:177504793:- YES_LDAS 0.0034 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr5]"] DNAJC3--UGGT2 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC3^ENSG00000102580.15 chr13:95763953:+ UGGT2^ENSG00000102595.20 chr13:95801812:- YES_LDAS 0.0034 GT 1.5301 AG 1.8892 ["INTRACHROMOSOMAL[chr13:0.01Mb]","LOCAL_INVERSION:+:-:[6592]"] DNAJC14--SIRT6 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJC14^ENSG00000135392.19 chr12:55821460:- SIRT6^ENSG00000077463.15 chr19:4180859:- NO_LDAS 0.0034 GT 1.6729 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr19]"] DNAJB14--RBPJ 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJB14^ENSG00000164031.17 chr4:99946439:- RBPJ^ENSG00000168214.21 chr4:26420551:+ YES_LDAS 0.0034 GT 1.3996 AG 1.9086 ["INTRACHROMOSOMAL[chr4:73.46Mb]"] DNAH6--AC007279.1 1 0 1.00 0.00 ONLY_REF_SPLICE DNAH6^ENSG00000115423.19 chr2:84781653:+ AC007279.1^ENSG00000287133.1 chr2:201643882:+ YES_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTRACHROMOSOMAL[chr2:116.82Mb]"] DNAH2--AC010768.2 1 0 1.00 0.00 ONLY_REF_SPLICE DNAH2^ENSG00000183914.14 chr17:7794358:+ AC010768.2^ENSG00000255092.1 chr11:44606460:- NO_LDAS 0.0034 GT 1.7465 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr11]"] DNAAF4--TXLNGY 1 0 1.00 0.00 ONLY_REF_SPLICE DNAAF4^ENSG00000256061.7 chr15:55434905:- TXLNGY^ENSG00000131002.12 chrY:19591780:+ YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chrY]"] DMXL2--AL022322.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DMXL2^ENSG00000104093.14 chr15:51535663:- AL022322.2^ENSG00000279080.1 chr22:38147586:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr15--chr22]"] DMAC1--ZBTB17 1 0 0.33 0.00 INCL_NON_REF_SPLICE DMAC1^ENSG00000137038.8 chr9:7796675:- ZBTB17^ENSG00000116809.12 chr1:15945194:- NO_LDAS 0.0011 GT 1.6895 AG 1.5628 ["INTERCHROMOSOMAL[chr9--chr1]"] DLL1--RNY1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DLL1^ENSG00000198719.9 chr6:170288394:- RNY1^ENSG00000201098.1 chr7:148987194:- YES_LDAS 0.0017 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr7]"] DLGAP4-AS1--ZNF200 1 0 1.00 0.00 INCL_NON_REF_SPLICE DLGAP4-AS1^ENSG00000232907.8 chr20:36527654:- ZNF200^ENSG00000010539.12 chr16:3233776:- YES_LDAS 0.0034 GT 1.7465 AG 0.9968 ["INTERCHROMOSOMAL[chr20--chr16]"] DLG2--ZNF449 1 0 1.00 0.00 ONLY_REF_SPLICE DLG2^ENSG00000150672.18 chr11:85154556:- ZNF449^ENSG00000173275.13 chrX:135359892:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chrX]"] DLEU2--RORA 1 0 1.00 0.00 ONLY_REF_SPLICE DLEU2^ENSG00000231607.13 chr13:50125302:- RORA^ENSG00000069667.16 chr15:60531851:- YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr13--chr15]"] DLAT--C11orf1 1 0 1.00 0.00 ONLY_REF_SPLICE DLAT^ENSG00000150768.17 chr11:112033530:+ C11orf1^ENSG00000137720.8 chr11:111883771:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["DEEPEST2019","INTRACHROMOSOMAL[chr11:0.14Mb]"] DIPK1B--TAP2 1 0 1.00 0.00 ONLY_REF_SPLICE DIPK1B^ENSG00000165716.11 chr9:136717711:+ TAP2^ENSG00000204267.16 chr6:32830440:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr6]"] DIPK1A--MIGA1 1 0 1.00 0.00 ONLY_REF_SPLICE DIPK1A^ENSG00000154511.12 chr1:92961376:- MIGA1^ENSG00000180488.15 chr1:77813734:+ YES_LDAS 0.0034 GT 1.7465 AG 1.5058 ["INTRACHROMOSOMAL[chr1:14.95Mb]"] DHX8--VPS35 1 0 1.00 0.00 ONLY_REF_SPLICE DHX8^ENSG00000067596.12 chr17:43520879:+ VPS35^ENSG00000069329.18 chr16:46677398:- YES_LDAS 0.0034 GT 1.9899 AG 1.7968 ["INTERCHROMOSOMAL[chr17--chr16]"] DHX33--TIAL1 1 0 1.00 0.00 ONLY_REF_SPLICE DHX33^ENSG00000005100.13 chr17:5468571:- TIAL1^ENSG00000151923.18 chr10:119577535:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr10]"] DGKQ--DUSP23 1 0 1.00 0.00 INCL_NON_REF_SPLICE DGKQ^ENSG00000145214.14 chr4:962435:- DUSP23^ENSG00000158716.9 chr1:159781338:+ NO_LDAS 0.0034 GT 1.5301 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr1]"] DGKH--VWA8 1 0 1.00 0.00 ONLY_REF_SPLICE DGKH^ENSG00000102780.17 chr13:42048965:+ VWA8^ENSG00000102763.18 chr13:41912168:- YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr13:0.08Mb]","LOCAL_INVERSION:+:-:[78916]"] DGKA--OR5AN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DGKA^ENSG00000065357.20 chr12:55942083:+ OR5AN1^ENSG00000176495.3 chr11:59366351:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr11]"] DGCR8--TANGO2 1 0 1.00 0.00 ONLY_REF_SPLICE DGCR8^ENSG00000128191.16 chr22:20094795:+ TANGO2^ENSG00000183597.16 chr22:20052465:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7232 ["INTRACHROMOSOMAL[chr22:0.01Mb]","LOCAL_REARRANGEMENT:+:[13068]"] DFFB--ACOT7 1 0 1.00 0.00 ONLY_REF_SPLICE DFFB^ENSG00000169598.17 chr1:3858844:+ ACOT7^ENSG00000097021.20 chr1:6294980:- YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr1:2.38Mb]"] DEXI--RAB6A 1 0 1.00 0.00 INCL_NON_REF_SPLICE DEXI^ENSG00000182108.11 chr16:10938060:- RAB6A^ENSG00000175582.20 chr11:73718718:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr11]"] DERA--TP53BP1 1 0 1.00 0.00 ONLY_REF_SPLICE DERA^ENSG00000023697.13 chr12:15911414:+ TP53BP1^ENSG00000067369.14 chr15:43470066:- YES_LDAS 0.0034 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr15]"] DENND6A--AC124947.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DENND6A^ENSG00000174839.13 chr3:57628296:- AC124947.1^ENSG00000257252.6 chr12:93339736:- NO_LDAS 0.0034 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr12]"] DEGS1--DECR2 1 0 0.33 0.00 ONLY_REF_SPLICE DEGS1^ENSG00000143753.13 chr1:224191156:+ DECR2^ENSG00000242612.7 chr16:406736:+ YES_LDAS 0.0011 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr16]"] DECR1--MTHFD2L 1 0 1.00 0.00 ONLY_REF_SPLICE DECR1^ENSG00000104325.7 chr8:90001561:+ MTHFD2L^ENSG00000163738.18 chr4:74174506:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr4]"] DDX55--GDF5 1 0 0.50 0.00 INCL_NON_REF_SPLICE DDX55^ENSG00000111364.16 chr12:123609956:+ GDF5^ENSG00000125965.9 chr20:35437807:- NO_LDAS 0.0017 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr20]"] DDX39A--ZNF100 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX39A^ENSG00000123136.15 chr19:14411478:- ZNF100^ENSG00000197020.11 chr19:21750778:- YES_LDAS 0.0034 GC 1.8256 AG 1.2366 ["INTRACHROMOSOMAL[chr19:7.30Mb]"] DDX19B--NUDT22 1 0 1.00 0.00 ONLY_REF_SPLICE DDX19B^ENSG00000157349.17 chr16:70299354:+ NUDT22^ENSG00000149761.9 chr11:64229247:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr11]"] DDX18--ANKRD36 1 0 0.50 0.00 ONLY_REF_SPLICE DDX18^ENSG00000088205.13 chr2:117826382:+ ANKRD36^ENSG00000135976.20 chr2:97179738:+ YES_LDAS 0.0017 GT 1.8295 AG 1.9329 ["INTRACHROMOSOMAL[chr2:20.55Mb]"] DDX11--LINC00343 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX11^ENSG00000013573.17 chr12:31089104:+ LINC00343^ENSG00000226620.8 chr13:105707202:+ NO_LDAS 0.0034 GC 1.4295 AG 1.5329 ["INTERCHROMOSOMAL[chr12--chr13]"] DDX1--RUVBL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX1^ENSG00000079785.16 chr2:15621541:+ RUVBL2^ENSG00000183207.14 chr19:49014587:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr19]"] DDTL--GPSM2 1 0 0.50 0.00 INCL_NON_REF_SPLICE DDTL^ENSG00000099974.8 chr22:23967022:+ GPSM2^ENSG00000121957.15 chr1:108906269:+ NO_LDAS 0.0017 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr1]"] DDT--GPSM2 1 0 0.50 0.00 INCL_NON_REF_SPLICE DDT^ENSG00000099977.14 chr22:23974307:- GPSM2^ENSG00000121957.15 chr1:108906269:+ NO_LDAS 0.0017 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr1]"] DDHD2--DYNC1LI2 1 0 1.00 0.00 ONLY_REF_SPLICE DDHD2^ENSG00000085788.14 chr8:38237627:+ DYNC1LI2^ENSG00000135720.13 chr16:66749313:- YES_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr16]"] DCUN1D4--TRAF2 1 0 1.00 0.00 ONLY_REF_SPLICE DCUN1D4^ENSG00000109184.15 chr4:51843267:+ TRAF2^ENSG00000127191.18 chr9:136898713:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr9]"] DCTN6--CSGALNACT1 1 0 1.00 0.00 ONLY_REF_SPLICE DCTN6^ENSG00000104671.8 chr8:30164175:+ CSGALNACT1^ENSG00000147408.14 chr8:19506130:- YES_LDAS 0.0034 GT 1.9329 AG 1.5219 ["INTRACHROMOSOMAL[chr8:10.40Mb]"] DCTN4--SLC30A7 1 0 1.00 0.00 INCL_NON_REF_SPLICE DCTN4^ENSG00000132912.13 chr5:150753479:- SLC30A7^ENSG00000162695.12 chr1:100896229:+ YES_LDAS 0.0034 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr1]"] DCAF6--SMAP2 1 0 1.00 0.00 ONLY_REF_SPLICE DCAF6^ENSG00000143164.15 chr1:167937008:+ SMAP2^ENSG00000084070.12 chr1:40406736:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr1:127.51Mb]"] DCAF6--MPC2 1 0 1.00 0.00 ONLY_REF_SPLICE DCAF6^ENSG00000143164.15 chr1:168068463:+ MPC2^ENSG00000143158.11 chr1:167924537:- YES_LDAS 0.0034 GT 1.9899 AG 1.9899 ["INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1289]"] DBNDD2--SYS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DBNDD2^ENSG00000244274.8 chr20:45410255:+ SYS1^ENSG00000204070.10 chr20:45366875:+ YES_LDAS 0.0034 GT 1.8256 AG 1.5850 ["INTRACHROMOSOMAL[chr20:0.03Mb]","LOCAL_REARRANGEMENT:+:[29259]"] DBI--SNX8 1 0 1.00 0.00 INCL_NON_REF_SPLICE DBI^ENSG00000155368.16 chr2:119367445:+ SNX8^ENSG00000106266.11 chr7:2257803:- NO_LDAS 0.0034 GT 1.7465 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr7]"] CYTOR--SLC22A23 1 0 0.50 0.00 INCL_NON_REF_SPLICE CYTOR^ENSG00000222041.11 chr2:87521354:+ SLC22A23^ENSG00000137266.15 chr6:3289864:- YES_LDAS 0.0017 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr6]"] CYRIB--IKZF1 1 0 1.00 0.00 ONLY_REF_SPLICE CYRIB^ENSG00000153310.19 chr8:129970943:- IKZF1^ENSG00000185811.19 chr7:50399918:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr7]"] CYREN--AC083870.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYREN^ENSG00000122783.17 chr7:135167732:- AC083870.1^ENSG00000286458.1 chr7:134998151:- NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chr7:0.09Mb]","NEIGHBORS[94210]"] CYP4Z1--CYP4X1 1 0 1.00 0.00 ONLY_REF_SPLICE CYP4Z1^ENSG00000186160.5 chr1:47068763:+ CYP4X1^ENSG00000186377.8 chr1:47046467:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8295 ["DGD_PARALOGS","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr1:0.02Mb]","LOCAL_REARRANGEMENT:+:[16480]"] CYP4V2--MAN2A1 1 0 1.00 0.00 ONLY_REF_SPLICE CYP4V2^ENSG00000145476.16 chr4:186192037:+ MAN2A1^ENSG00000112893.10 chr5:109755329:+ YES_LDAS 0.0034 GT 1.4566 AG 1.5058 ["INTERCHROMOSOMAL[chr4--chr5]"] CYP27A1--BLCAP 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYP27A1^ENSG00000135929.9 chr2:218782211:+ BLCAP^ENSG00000166619.15 chr20:37519231:- YES_LDAS 0.0034 GT 1.7968 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr20]"] CYP1B1--MSH6 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYP1B1^ENSG00000138061.12 chr2:38070783:- MSH6^ENSG00000116062.17 chr2:47798645:+ NO_LDAS 0.0034 GT 1.9899 AG 1.4566 ["INTRACHROMOSOMAL[chr2:9.59Mb]"] CYB5A--VPS41 1 0 0.50 0.00 INCL_NON_REF_SPLICE CYB5A^ENSG00000166347.19 chr18:74256202:- VPS41^ENSG00000006715.16 chr7:38772600:- NO_LDAS 0.0017 GT 1.4566 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr7]"] CYB561D2--IQSEC3P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYB561D2^ENSG00000114395.11 chr3:50358407:+ IQSEC3P1^ENSG00000256902.1 chr12:2752646:- NO_LDAS 0.0034 GC 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr12]"] CXADR--GNPDA2 1 0 1.00 0.00 ONLY_REF_SPLICE CXADR^ENSG00000154639.19 chr21:17513172:+ GNPDA2^ENSG00000163281.12 chr4:44722242:- YES_LDAS 0.0034 GT 1.6402 AG 1.7232 ["INTERCHROMOSOMAL[chr21--chr4]"] CWF19L2--TEK 1 0 1.00 0.00 INCL_NON_REF_SPLICE CWF19L2^ENSG00000152404.15 chr11:107390074:- TEK^ENSG00000120156.22 chr9:27202948:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr9]"] CWC27--DAW1 1 0 1.00 0.00 ONLY_REF_SPLICE CWC27^ENSG00000153015.16 chr5:64977238:+ DAW1^ENSG00000123977.10 chr2:227912254:+ YES_LDAS 0.0034 GT 1.5219 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr2]"] CWC27--AC073071.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CWC27^ENSG00000153015.16 chr5:64804386:+ AC073071.1^ENSG00000234273.1 chr7:109562811:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr7]"] CWC22--CERKL 1 0 1.00 0.00 ONLY_REF_SPLICE CWC22^ENSG00000163510.14 chr2:179950512:- CERKL^ENSG00000188452.14 chr2:181549708:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr2:1.53Mb]"] CUTA--CCNT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CUTA^ENSG00000112514.18 chr6:33417651:- CCNT2^ENSG00000082258.13 chr2:134953883:+ YES_LDAS 0.0034 GT 1.5058 AG 1.5329 ["INTERCHROMOSOMAL[chr6--chr2]"] CUL5--IFNGR2 1 0 1.00 0.00 ONLY_REF_SPLICE CUL5^ENSG00000166266.14 chr11:108046369:+ IFNGR2^ENSG00000159128.15 chr21:33432177:+ YES_LDAS 0.0034 GT 1.5301 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr21]"] CUL3--AGFG1 1 0 1.00 0.00 ONLY_REF_SPLICE CUL3^ENSG00000036257.13 chr2:224535528:- AGFG1^ENSG00000173744.18 chr2:227531091:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr2:2.89Mb]"] CUL1--ANKRD13A 1 0 1.00 0.00 ONLY_REF_SPLICE CUL1^ENSG00000055130.17 chr7:148730283:+ ANKRD13A^ENSG00000076513.17 chr12:110012005:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr12]"] CUL1--AC127502.1 1 0 0.50 0.00 ONLY_REF_SPLICE CUL1^ENSG00000055130.17 chr7:148792818:+ AC127502.1^ENSG00000215302.8 chr15:30474356:+ NO_LDAS 0.0017 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr15]"] CU633906.2--NUMB 1 0 0.25 0.00 ONLY_REF_SPLICE CU633906.2^ENSG00000278903.3 chr21:6318604:+ NUMB^ENSG00000133961.20 chr14:73297285:- YES_LDAS 0.0008 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr21--chr14]"] CTU2--ACVRL1 1 0 1.00 0.00 ONLY_REF_SPLICE CTU2^ENSG00000174177.13 chr16:88707210:+ ACVRL1^ENSG00000139567.13 chr12:51920759:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr12]"] CTR9--TFAM 1 0 1.00 0.00 INCL_NON_REF_SPLICE CTR9^ENSG00000198730.9 chr11:10801528:+ TFAM^ENSG00000108064.11 chr10:58390768:+ YES_LDAS 0.0034 GT 0.7219 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr10]"] CTPS1--BTN3A1 1 0 0.33 0.00 INCL_NON_REF_SPLICE CTPS1^ENSG00000171793.16 chr1:41009610:+ BTN3A1^ENSG00000026950.17 chr6:26405909:+ NO_LDAS 0.0011 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr6]"] CTDSPL2--MXI1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CTDSPL2^ENSG00000137770.14 chr15:44528173:+ MXI1^ENSG00000119950.21 chr10:110284826:+ NO_LDAS 0.0017 GT 1.4295 AG 1.5656 ["INTERCHROMOSOMAL[chr15--chr10]"] CTC-338M12.4--BAGE2 1 0 0.50 0.00 INCL_NON_REF_SPLICE CTC-338M12.4^ENSG00000233937.7 chr5:181272059:+ BAGE2^ENSG00000187172.15 chr21:10414811:+ YES_LDAS 0.0017 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr5--chr21]"] CTC-338M12.4--AC008443.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE CTC-338M12.4^ENSG00000233937.7 chr5:181272059:+ AC008443.2^ENSG00000248103.1 chr5:181283342:+ YES_LDAS 0.0017 GT 1.7819 AG 1.6402 ["INTRACHROMOSOMAL[chr5:0.01Mb]","NEIGHBORS[9208]"] CSTF3--RAB40B 1 0 1.00 0.00 ONLY_REF_SPLICE CSTF3^ENSG00000176102.13 chr11:33141667:- RAB40B^ENSG00000141542.11 chr17:82655667:- YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr17]"] CSTF1--LINC00964 1 0 1.00 0.00 INCL_NON_REF_SPLICE CSTF1^ENSG00000101138.12 chr20:56403672:+ LINC00964^ENSG00000249816.7 chr8:124962378:+ NO_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr8]"] CSTB--AC068473.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CSTB^ENSG00000160213.9 chr21:43774658:- AC068473.3^ENSG00000267287.1 chr18:79579287:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr18]"] CSNK2A1--ANKRD20A21P 1 0 1.00 0.00 ONLY_REF_SPLICE CSNK2A1^ENSG00000101266.19 chr20:492254:- ANKRD20A21P^ENSG00000277112.3 chr20:30720052:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr20:30.11Mb]"] CS--AC006453.3 1 0 0.14 0.00 INCL_NON_REF_SPLICE CS^ENSG00000062485.19 chr12:56274831:- AC006453.3^ENSG00000283427.1 chr2:89538188:+ NO_LDAS 0.0005 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr12--chr2]"] CRYZ--CRYZP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRYZ^ENSG00000116791.14 chr1:74714579:- CRYZP1^ENSG00000233025.1 chr7:103089197:- NO_LDAS 0.0034 GT 1.4716 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr7]"] CRY1--MMAB 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRY1^ENSG00000008405.12 chr12:107093441:- MMAB^ENSG00000139428.12 chr12:109559155:- NO_LDAS 0.0034 GC 1.5656 AG 1.5058 ["INTRACHROMOSOMAL[chr12:2.46Mb]"] CREG1--OAS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CREG1^ENSG00000143162.9 chr1:167546112:- OAS2^ENSG00000111335.14 chr12:112995376:+ NO_LDAS 0.0034 GT 1.3996 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr12]"] CREBL2--EIF2B3 1 0 1.00 0.00 ONLY_REF_SPLICE CREBL2^ENSG00000111269.3 chr12:12612187:+ EIF2B3^ENSG00000070785.17 chr1:44972574:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr1]"] CREB5--FAM126A 1 0 1.00 0.00 ONLY_REF_SPLICE CREB5^ENSG00000146592.17 chr7:28570537:+ FAM126A^ENSG00000122591.13 chr7:22946163:- YES_LDAS 0.0034 GT 1.8062 AG 1.5546 ["INTRACHROMOSOMAL[chr7:5.29Mb]"] CREB1--LRRC74A 1 0 1.00 0.00 INCL_NON_REF_SPLICE CREB1^ENSG00000118260.15 chr2:207577655:+ LRRC74A^ENSG00000100565.15 chr14:76826640:+ NO_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr14]"] CRCP--WFDC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRCP^ENSG00000241258.7 chr7:66152361:+ WFDC1^ENSG00000103175.11 chr16:84316058:+ NO_LDAS 0.0034 GC 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr7--chr16]"] CRADD--AC012464.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRADD^ENSG00000169372.13 chr12:93679072:+ AC012464.3^ENSG00000271382.1 chr12:93947063:+ YES_LDAS 0.0034 GT 1.7968 AG 1.6895 ["INTRACHROMOSOMAL[chr12:0.05Mb]","NEIGHBORS[50201]"] CPSF4--BUD31 1 0 1.00 0.00 ONLY_REF_SPLICE CPSF4^ENSG00000160917.15 chr7:99454136:+ BUD31^ENSG00000106245.11 chr7:99419391:+ NO_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr7:0.02Mb]","LOCAL_REARRANGEMENT:+:[19306]"] CPQ--SMAP2 1 0 1.00 0.00 ONLY_REF_SPLICE CPQ^ENSG00000104324.16 chr8:96645402:+ SMAP2^ENSG00000084070.12 chr1:40406736:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr1]"] CPQ--SDC2 1 0 1.00 0.00 ONLY_REF_SPLICE CPQ^ENSG00000104324.16 chr8:96645402:+ SDC2^ENSG00000169439.12 chr8:96593480:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["DEEPEST2019","INTRACHROMOSOMAL[chr8:0.03Mb]","LOCAL_REARRANGEMENT:+:[33452]"] CPNE8--SPPL2A 1 0 1.00 0.00 ONLY_REF_SPLICE CPNE8^ENSG00000139117.14 chr12:38829379:- SPPL2A^ENSG00000138600.10 chr15:50749746:- YES_LDAS 0.0034 GT 1.7232 AG 1.8256 ["INTERCHROMOSOMAL[chr12--chr15]"] COX7A2L--MTA3 1 0 1.00 0.00 ONLY_REF_SPLICE COX7A2L^ENSG00000115944.15 chr2:42361090:- MTA3^ENSG00000057935.14 chr2:42656200:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr2:0.07Mb]","LOCAL_INVERSION:-:+:[69481]"] COX7A2--FES 1 0 0.50 0.00 INCL_NON_REF_SPLICE COX7A2^ENSG00000112695.11 chr6:75237978:- FES^ENSG00000182511.12 chr15:90889857:+ NO_LDAS 0.0017 GC 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr15]"] COX19--SPI1 1 0 0.50 0.00 INCL_NON_REF_SPLICE COX19^ENSG00000240230.6 chr7:965723:- SPI1^ENSG00000066336.12 chr11:47359064:- NO_LDAS 0.0017 GT 1.5219 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr11]"] COX16--FNIP2 1 0 1.00 0.00 ONLY_REF_SPLICE COX16^ENSG00000133983.16 chr14:70359519:- FNIP2^ENSG00000052795.13 chr4:158851321:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr4]"] COX15--ANXA10 1 0 1.00 0.00 ONLY_REF_SPLICE COX15^ENSG00000014919.13 chr10:99716348:- ANXA10^ENSG00000109511.12 chr4:168184559:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr4]"] CORIN--NFXL1 1 0 1.00 0.00 ONLY_REF_SPLICE CORIN^ENSG00000145244.12 chr4:47806903:- NFXL1^ENSG00000170448.12 chr4:47890703:- NO_LDAS 0.0034 GT 1.6729 AG 1.9899 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:-:[9127]"] COQ4--GTF2IP1 1 0 1.00 0.00 ONLY_REF_SPLICE COQ4^ENSG00000167113.11 chr9:128325881:+ GTF2IP1^ENSG00000277053.4 chr7:75217264:- YES_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr7]"] COQ4--CTPS2 1 0 1.00 0.00 ONLY_REF_SPLICE COQ4^ENSG00000167113.11 chr9:128325881:+ CTPS2^ENSG00000047230.15 chrX:16702941:- YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chrX]"] COPZ1--LOXL1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPZ1^ENSG00000111481.10 chr12:54343256:+ LOXL1-AS1^ENSG00000261801.6 chr15:73925297:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr15]"] COPS8--FCGR3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPS8^ENSG00000198612.11 chr2:237096869:+ FCGR3B^ENSG00000162747.12 chr1:161630083:- NO_LDAS 0.0034 GT 1.7465 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr1]"] COPS7A--TPTEP2 1 0 1.00 0.00 ONLY_REF_SPLICE COPS7A^ENSG00000111652.10 chr12:6724250:+ TPTEP2^ENSG00000244627.5 chr22:38380990:- NO_LDAS 0.0034 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr22]"] COPS6--OR7E84P 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPS6^ENSG00000168090.10 chr7:100089351:+ OR7E84P^ENSG00000284689.1 chr4:9469379:+ NO_LDAS 0.0034 GT 1.5329 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr4]"] COPB1--RRAS2P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COPB1^ENSG00000129083.13 chr11:14443724:- RRAS2P1^ENSG00000236360.2 chr1:52993702:- YES_LDAS 0.0034 GT 1.9899 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr1]"] COMMD6--ZFP82 1 0 1.00 0.00 INCL_NON_REF_SPLICE COMMD6^ENSG00000188243.13 chr13:75537664:- ZFP82^ENSG00000181007.9 chr19:36395626:- NO_LDAS 0.0034 GT 1.7819 AG 1.7232 ["INTERCHROMOSOMAL[chr13--chr19]"] COMMD4--AF241728.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COMMD4^ENSG00000140365.16 chr15:75340045:+ AF241728.1^ENSG00000235806.1 chrX:38791904:+ NO_LDAS 0.0034 GT 1.5329 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chrX]"] COMMD2--ZNF148 1 0 1.00 0.00 ONLY_REF_SPLICE COMMD2^ENSG00000114744.9 chr3:149750678:- ZNF148^ENSG00000163848.20 chr3:125313656:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr3:24.36Mb]"] COLCA1--SLC25A10 1 0 1.00 0.00 ONLY_REF_SPLICE COLCA1^ENSG00000196167.10 chr11:111304828:- SLC25A10^ENSG00000183048.12 chr17:81714953:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr17]"] COL4A5--C8orf74 1 0 1.00 0.00 INCL_NON_REF_SPLICE COL4A5^ENSG00000188153.14 chrX:108578383:+ C8orf74^ENSG00000171060.11 chr8:10692871:+ NO_LDAS 0.0034 GT 1.6895 AG 1.6729 ["INTERCHROMOSOMAL[chrX--chr8]"] COG6--UEVLD 1 0 1.00 0.00 ONLY_REF_SPLICE COG6^ENSG00000133103.17 chr13:39699618:+ UEVLD^ENSG00000151116.17 chr11:18578808:- YES_LDAS 0.0034 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr11]"] CNPY2--METTL2A 1 0 0.50 0.00 ONLY_REF_SPLICE CNPY2^ENSG00000257727.6 chr12:56314851:- METTL2A^ENSG00000087995.16 chr17:62440617:+ YES_LDAS 0.0017 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr17]"] CNOT4--NUP205 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT4^ENSG00000080802.19 chr7:135509889:- NUP205^ENSG00000155561.15 chr7:135571105:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9086 ["INTRACHROMOSOMAL[chr7:0.05Mb]","LOCAL_INVERSION:-:+:[47790]"] CNOT4--GLCCI1 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT4^ENSG00000080802.19 chr7:135393918:- GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr7:127.27Mb]"] CNOT2--AC068279.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE CNOT2^ENSG00000111596.14 chr12:70330469:+ AC068279.1^ENSG00000224881.1 chr2:87380735:- YES_LDAS 0.0011 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr2]"] CNNM4--ANKRD36 1 0 1.00 0.00 ONLY_REF_SPLICE CNNM4^ENSG00000158158.12 chr2:96762401:+ ANKRD36^ENSG00000135976.20 chr2:97264329:+ YES_LDAS 0.0034 GT 1.7056 AG 1.8892 ["INTRACHROMOSOMAL[chr2:0.30Mb]"] CNNM2--S100PBP 1 0 1.00 0.00 INCL_NON_REF_SPLICE CNNM2^ENSG00000148842.18 chr10:103089752:+ S100PBP^ENSG00000116497.18 chr1:32836178:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7232 ["INTERCHROMOSOMAL[chr10--chr1]"] CNKSR3--IPCEF1 1 0 1.00 0.00 ONLY_REF_SPLICE CNKSR3^ENSG00000153721.19 chr6:154410343:- IPCEF1^ENSG00000074706.13 chr6:154265964:- YES_LDAS 0.0034 GT 1.8323 AG 1.5546 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.03Mb]","NEIGHBORS[30723]"] CNEP1R1--LETMD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CNEP1R1^ENSG00000205423.12 chr16:50025701:+ LETMD1^ENSG00000050426.16 chr12:51052266:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr16--chr12]"] CMC4--TBCK 1 0 1.00 0.00 ONLY_REF_SPLICE CMC4^ENSG00000182712.16 chrX:155070694:- TBCK^ENSG00000145348.17 chr4:106308989:- NO_LDAS 0.0034 GT 1.4295 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr4]"] CMC2--CWF19L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CMC2^ENSG00000103121.9 chr16:81006847:- CWF19L2^ENSG00000152404.15 chr11:107390211:- YES_LDAS 0.0034 GT 1.7232 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr11]"] CLTA--CPEB2-DT 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLTA^ENSG00000122705.17 chr9:36204179:+ CPEB2-DT^ENSG00000247624.6 chr4:14994203:- NO_LDAS 0.0034 GT 1.2419 AG 1.2729 ["INTERCHROMOSOMAL[chr9--chr4]"] CLSPN--WIPI2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLSPN^ENSG00000092853.14 chr1:35733199:- WIPI2^ENSG00000157954.15 chr7:5227280:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr7]"] CLNS1A--PAK1 1 0 1.00 0.00 ONLY_REF_SPLICE CLNS1A^ENSG00000074201.9 chr11:77637590:- PAK1^ENSG00000149269.10 chr11:77323360:- YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr11:0.04Mb]","NEIGHBORS[40301]"] CLN8--RALGAPB 1 0 1.00 0.00 ONLY_REF_SPLICE CLN8^ENSG00000182372.10 chr8:1771597:+ RALGAPB^ENSG00000170471.15 chr20:38531167:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr8--chr20]"] CLN6--PIAS1 1 0 1.00 0.00 ONLY_REF_SPLICE CLN6^ENSG00000128973.13 chr15:68229502:- PIAS1^ENSG00000033800.14 chr15:68086306:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["DEEPEST2019","ChimerSeq","INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_INVERSION:-:+:[8389]"] CLEC1A--CD69 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLEC1A^ENSG00000150048.10 chr12:10071341:- CD69^ENSG00000110848.8 chr12:9756419:- YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:0.31Mb]"] CLDN14--TMEM104 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLDN14^ENSG00000159261.12 chr21:36477442:- TMEM104^ENSG00000109066.14 chr17:74795562:+ NO_LDAS 0.0034 GC 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr21--chr17]"] CLDN11--SLC7A14-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE CLDN11^ENSG00000013297.12 chr3:170423327:+ SLC7A14-AS1^ENSG00000285051.2 chr3:170591114:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS_OVERLAP:+:+:[6094]"] CISD1--BICC1 1 0 1.00 0.00 ONLY_REF_SPLICE CISD1^ENSG00000122873.12 chr10:58269304:+ BICC1^ENSG00000122870.12 chr10:58702074:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr10:0.22Mb]"] CISD1--AKR1E2 1 0 1.00 0.00 ONLY_REF_SPLICE CISD1^ENSG00000122873.12 chr10:58277322:+ AKR1E2^ENSG00000165568.18 chr10:4830675:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr10:53.42Mb]"] CIR1--ACVRL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CIR1^ENSG00000138433.16 chr2:174350733:- ACVRL1^ENSG00000139567.13 chr12:51913113:+ NO_LDAS 0.0034 GT 1.8256 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr12]"] CIAO1--RASA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CIAO1^ENSG00000144021.3 chr2:96269014:+ RASA3^ENSG00000185989.11 chr13:114041089:- YES_LDAS 0.0034 GT 1.3383 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr13]"] CHST13--RNF5 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHST13^ENSG00000180767.10 chr3:126524236:+ RNF5^ENSG00000204308.8 chr6:32179910:+ NO_LDAS 0.0034 GT 1.5219 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr6]"] CHRNA7--TDRD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHRNA7^ENSG00000175344.19 chr15:32102861:+ TDRD3^ENSG00000083544.16 chr13:60467238:+ NO_LDAS 0.0034 GT 1.6402 AG 1.5329 ["INTERCHROMOSOMAL[chr15--chr13]"] CHODL--AXDND1 1 0 0.50 0.00 ONLY_REF_SPLICE CHODL^ENSG00000154645.14 chr21:17901424:+ AXDND1^ENSG00000162779.22 chr1:179525334:+ NO_LDAS 0.0017 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr21--chr1]"] CHIC2--PTPRD 1 0 1.00 0.00 ONLY_REF_SPLICE CHIC2^ENSG00000109220.11 chr4:54048955:- PTPRD^ENSG00000153707.17 chr9:8636844:- YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr9]"] CHEK1--ZNF862 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHEK1^ENSG00000149554.13 chr11:125625830:+ ZNF862^ENSG00000106479.11 chr7:149859463:+ YES_LDAS 0.0034 GC 1.6895 AG 1.7056 ["INTERCHROMOSOMAL[chr11--chr7]"] CHCHD7--PSD3 1 0 1.00 0.00 ONLY_REF_SPLICE CHCHD7^ENSG00000170791.18 chr8:56211837:+ PSD3^ENSG00000156011.17 chr8:18936142:- YES_LDAS 0.0034 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr8:37.13Mb]"] CHCHD5--AC012442.2 1 0 1.00 0.00 ONLY_REF_SPLICE CHCHD5^ENSG00000125611.15 chr2:112586365:+ AC012442.2^ENSG00000243389.1 chr2:112614213:+ YES_LDAS 0.0034 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:+:+:[235]"] CHAF1A--AC011504.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHAF1A^ENSG00000167670.16 chr19:4402814:+ AC011504.1^ENSG00000280061.1 chr19:30557395:+ NO_LDAS 0.0034 GT 1.5058 AG 1.9329 ["INTRACHROMOSOMAL[chr19:26.11Mb]"] CGGBP1--PRR13P2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CGGBP1^ENSG00000163320.12 chr3:88055883:- PRR13P2^ENSG00000254884.1 chr11:9311702:- YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr11]"] CFAP65--KRTAP5-1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CFAP65^ENSG00000181378.14 chr2:219022195:- KRTAP5-1^ENSG00000205869.2 chr11:1585211:- NO_LDAS 0.0034 GT 1.5058 AG 1.3383 ["INTERCHROMOSOMAL[chr2--chr11]"] CERS6--AC138819.1 1 0 0.50 0.00 ONLY_REF_SPLICE CERS6^ENSG00000172292.15 chr2:168456618:+ AC138819.1^ENSG00000249849.1 chr5:177706706:+ YES_LDAS 0.0017 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr5]"] CERS5--PSMD5 1 0 1.00 0.00 ONLY_REF_SPLICE CERS5^ENSG00000139624.14 chr12:50134546:- PSMD5^ENSG00000095261.14 chr9:120821464:- YES_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr9]"] CERS5--AC018647.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CERS5^ENSG00000139624.14 chr12:50167101:- AC018647.3^ENSG00000287032.1 chr7:35621191:- YES_LDAS 0.0034 GT 1.8256 AG 1.7056 ["INTERCHROMOSOMAL[chr12--chr7]"] CERS4--GNL2 1 0 1.00 0.00 ONLY_REF_SPLICE CERS4^ENSG00000090661.12 chr19:8209494:+ GNL2^ENSG00000134697.13 chr1:37587495:- NO_LDAS 0.0034 GT 1.5546 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr1]"] CEP76--DAGLA 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP76^ENSG00000101624.11 chr18:12673437:- DAGLA^ENSG00000134780.10 chr11:61735787:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr18--chr11]"] CEP192--USP48 1 0 1.00 0.00 ONLY_REF_SPLICE CEP192^ENSG00000101639.18 chr18:13030608:+ USP48^ENSG00000090686.16 chr1:21706868:- YES_LDAS 0.0034 GT 1.9219 AG 1.8062 ["INTERCHROMOSOMAL[chr18--chr1]"] CEP192--FAM210A 1 0 1.00 0.00 ONLY_REF_SPLICE CEP192^ENSG00000101639.18 chr18:13103588:+ FAM210A^ENSG00000177150.13 chr18:13682105:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr18:0.54Mb]"] CEP170--CMC2 1 0 1.00 0.00 ONLY_REF_SPLICE CEP170^ENSG00000143702.16 chr1:243255047:- CMC2^ENSG00000103121.9 chr16:80997429:- YES_LDAS 0.0034 GT 1.6402 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr16]"] CEP104--AC004079.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP104^ENSG00000116198.14 chr1:3823143:- AC004079.2^ENSG00000274864.1 chr7:27099779:+ YES_LDAS 0.0034 GT 1.7056 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr7]"] CENPW--AP4B1 1 0 1.00 0.00 ONLY_REF_SPLICE CENPW^ENSG00000203760.9 chr6:126346318:+ AP4B1^ENSG00000134262.13 chr1:113904793:- YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr1]"] CENPL--PRDX6 1 0 1.00 0.00 ONLY_REF_SPLICE CENPL^ENSG00000120334.15 chr1:173823926:- PRDX6^ENSG00000117592.9 chr1:173481326:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.31Mb]"] CENPA--BTN2A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CENPA^ENSG00000115163.15 chr2:26792166:+ BTN2A1^ENSG00000112763.17 chr6:26468479:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr6]"] CEMIP2--SRSF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEMIP2^ENSG00000135048.14 chr9:71722418:- SRSF1^ENSG00000136450.13 chr17:58005029:- YES_LDAS 0.0034 GC 1.9086 AG 1.5301 ["INTERCHROMOSOMAL[chr9--chr17]"] CEMIP2--CWF19L2 1 0 1.00 0.00 ONLY_REF_SPLICE CEMIP2^ENSG00000135048.14 chr9:71768357:- CWF19L2^ENSG00000152404.15 chr11:107418287:- YES_LDAS 0.0034 GT 1.3753 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr11]"] CEMIP--IDH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEMIP^ENSG00000103888.17 chr15:80874077:+ IDH1^ENSG00000138413.14 chr2:208254982:- NO_LDAS 0.0034 GT 1.6402 AG 1.4295 ["INTERCHROMOSOMAL[chr15--chr2]"] CEMIP--EFCAB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEMIP^ENSG00000103888.17 chr15:80921101:+ EFCAB1^ENSG00000034239.11 chr8:48711855:- NO_LDAS 0.0034 GT 1.9219 AG 1.5656 ["INTERCHROMOSOMAL[chr15--chr8]"] CELF6--AL109615.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CELF6^ENSG00000140488.16 chr15:72289475:- AL109615.2^ENSG00000231881.2 chr6:44079575:+ NO_LDAS 0.0034 GC 1.4295 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr6]"] CELF2--AC004080.15 1 0 1.00 0.00 INCL_NON_REF_SPLICE CELF2^ENSG00000048740.18 chr10:11275120:+ AC004080.15^ENSG00000278592.1 chr7:27187937:+ NO_LDAS 0.0034 GT 1.9219 AG 1.4256 ["INTERCHROMOSOMAL[chr10--chr7]"] CEBPG--PEPD 1 0 1.00 0.00 ONLY_REF_SPLICE CEBPG^ENSG00000153879.9 chr19:33373895:+ PEPD^ENSG00000124299.15 chr19:33391479:- NO_LDAS 0.0034 GT 1.6402 AG 1.5058 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_INVERSION:+:-:[4264]"] CDT1--ZNRD1ASP 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDT1^ENSG00000167513.9 chr16:88808292:+ ZNRD1ASP^ENSG00000204623.9 chr6:30007373:- NO_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr6]"] CDKAL1--MBOAT1 1 0 1.00 0.00 ONLY_REF_SPLICE CDKAL1^ENSG00000145996.11 chr6:20548705:+ MBOAT1^ENSG00000172197.11 chr6:20131199:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr6:0.32Mb]"] CDIN1--PCNX2 1 0 1.00 0.00 ONLY_REF_SPLICE CDIN1^ENSG00000186073.14 chr15:36709961:+ PCNX2^ENSG00000135749.19 chr1:233252788:- YES_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr1]"] CDCA7--PEX6 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDCA7^ENSG00000144354.14 chr2:173367831:+ PEX6^ENSG00000124587.14 chr6:42975038:- YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr6]"] CDC40--ASPN 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDC40^ENSG00000168438.15 chr6:110215310:+ ASPN^ENSG00000106819.13 chr9:92482373:- NO_LDAS 0.0034 GC 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr9]"] CDC25B--SGK3 1 0 0.50 0.00 INCL_NON_REF_SPLICE CDC25B^ENSG00000101224.18 chr20:3800333:+ SGK3^ENSG00000104205.16 chr8:66859583:+ NO_LDAS 0.0017 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr8]"] CDC25B--ATG2B 1 0 1.00 0.00 ONLY_REF_SPLICE CDC25B^ENSG00000101224.18 chr20:3787139:+ ATG2B^ENSG00000066739.12 chr14:96309594:- NO_LDAS 0.0034 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr20--chr14]"] CDC14B--WWP1 1 0 1.00 0.00 ONLY_REF_SPLICE CDC14B^ENSG00000081377.17 chr9:96619219:- WWP1^ENSG00000123124.14 chr8:86368939:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr8]"] CDC14A--ROR1 1 0 1.00 0.00 ONLY_REF_SPLICE CDC14A^ENSG00000079335.20 chr1:100390824:+ ROR1^ENSG00000185483.12 chr1:64009305:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr1:36.16Mb]"] CDC14A--RAP1A 1 0 1.00 0.00 ONLY_REF_SPLICE CDC14A^ENSG00000079335.20 chr1:100353852:+ RAP1A^ENSG00000116473.14 chr1:111703336:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTRACHROMOSOMAL[chr1:11.02Mb]"] CDC14A--PTPRC 1 0 1.00 0.00 ONLY_REF_SPLICE CDC14A^ENSG00000079335.20 chr1:100484451:+ PTPRC^ENSG00000081237.20 chr1:198692347:+ NO_LDAS 0.0034 GT 1.7819 AG 1.5219 ["INTRACHROMOSOMAL[chr1:98.12Mb]"] CDC123--USP6NL 1 0 1.00 0.00 ONLY_REF_SPLICE CDC123^ENSG00000151465.14 chr10:12196319:+ USP6NL^ENSG00000148429.14 chr10:11597717:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.58Mb]"] CDC123--IL15RA 1 0 1.00 0.00 ONLY_REF_SPLICE CDC123^ENSG00000151465.14 chr10:12217467:+ IL15RA^ENSG00000134470.21 chr10:5966339:- YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr10:6.22Mb]"] CDC123--CAMK1D 1 0 1.00 0.00 ONLY_REF_SPLICE CDC123^ENSG00000151465.14 chr10:12198776:+ CAMK1D^ENSG00000183049.13 chr10:12666736:+ YES_LDAS 0.0034 GT 1.7465 AG 1.6729 ["INTRACHROMOSOMAL[chr10:0.10Mb]","NEIGHBORS[98958]"] CDAN1--SULT1A1 1 0 0.33 0.00 INCL_NON_REF_SPLICE CDAN1^ENSG00000140326.13 chr15:42724538:- SULT1A1^ENSG00000196502.12 chr16:28608859:- YES_LDAS 0.0011 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr16]"] CD84--HIC2 1 0 0.33 0.00 INCL_NON_REF_SPLICE CD84^ENSG00000066294.15 chr1:160547114:- HIC2^ENSG00000169635.10 chr22:21450643:+ NO_LDAS 0.0011 GC 1.7056 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr22]"] CD83--AL009177.1 1 0 1.00 0.00 ONLY_REF_SPLICE CD83^ENSG00000112149.10 chr6:14118065:+ AL009177.1^ENSG00000286277.1 chr6:14498057:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr6:0.29Mb]"] CD83--AL009177.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD83^ENSG00000112149.10 chr6:14118065:+ AL009177.1^ENSG00000286277.1 chr6:14431780:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr6:0.29Mb]"] CD58--AC006453.2 1 0 0.17 0.00 ONLY_REF_SPLICE CD58^ENSG00000116815.16 chr1:116570903:- AC006453.2^ENSG00000283214.1 chr2:89662601:+ YES_LDAS 0.0006 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] CD47--PROX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD47^ENSG00000196776.17 chr3:108057477:- PROX2^ENSG00000119608.14 chr14:74854892:- NO_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr14]"] CD4--SPTBN5 1 0 1.00 0.00 INCL_NON_REF_SPLICE CD4^ENSG00000010610.10 chr12:6814792:+ SPTBN5^ENSG00000137877.10 chr15:41881125:- NO_LDAS 0.0034 GC 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr15]"] CCT8L1P--HOOK1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCT8L1P^ENSG00000020219.9 chr7:152446080:+ HOOK1^ENSG00000134709.12 chr1:59843549:+ NO_LDAS 0.0017 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr1]"] CCR6--SCML4 1 0 1.00 0.00 ONLY_REF_SPLICE CCR6^ENSG00000112486.17 chr6:167112014:+ SCML4^ENSG00000146285.14 chr6:107720993:- YES_LDAS 0.0034 GT 1.6402 AG 1.8323 ["INTRACHROMOSOMAL[chr6:59.29Mb]"] CCNT2--USP16 1 0 1.00 0.00 ONLY_REF_SPLICE CCNT2^ENSG00000082258.13 chr2:134942674:+ USP16^ENSG00000156256.15 chr21:29048761:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chr21]"] CCNT2--PPP4R3B 1 0 1.00 0.00 ONLY_REF_SPLICE CCNT2^ENSG00000082258.13 chr2:134947899:+ PPP4R3B^ENSG00000275052.5 chr2:55615506:- YES_LDAS 0.0034 GT 1.5219 AG 1.9656 ["INTRACHROMOSOMAL[chr2:79.30Mb]"] CCNT2--MGAT5 1 0 1.00 0.00 ONLY_REF_SPLICE CCNT2^ENSG00000082258.13 chr2:134919891:+ MGAT5^ENSG00000152127.9 chr2:134317529:+ NO_LDAS 0.0034 GT 1.2419 AG 1.8892 ["INTRACHROMOSOMAL[chr2:0.46Mb]"] CCNG2--KREMEN1 1 0 1.00 0.00 ONLY_REF_SPLICE CCNG2^ENSG00000138764.15 chr4:77179066:+ KREMEN1^ENSG00000183762.13 chr22:29137342:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTERCHROMOSOMAL[chr4--chr22]"] CCNF--MIA 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCNF^ENSG00000162063.13 chr16:2457980:+ MIA^ENSG00000261857.7 chr19:40775611:+ NO_LDAS 0.0034 GT 1.6402 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr19]"] CCNC--LINC01333 1 0 0.33 0.00 INCL_NON_REF_SPLICE CCNC^ENSG00000112237.13 chr6:99545112:- LINC01333^ENSG00000249343.3 chr5:74340133:+ NO_LDAS 0.0011 GT 1.5628 AG 1.5329 ["INTERCHROMOSOMAL[chr6--chr5]"] CCNC--AL353807.4 1 0 0.33 0.00 INCL_NON_REF_SPLICE CCNC^ENSG00000112237.13 chr6:99545112:- AL353807.4^ENSG00000271267.1 chr1:155566287:- NO_LDAS 0.0011 GT 1.5628 AG 1.5329 ["INTERCHROMOSOMAL[chr6--chr1]"] CCDC97--MMS22L 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCDC97^ENSG00000142039.4 chr19:41316788:+ MMS22L^ENSG00000146263.11 chr6:97283086:- NO_LDAS 0.0017 GT 1.4716 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr6]"] CCDC82--NR1D2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC82^ENSG00000149231.16 chr11:96349837:- NR1D2^ENSG00000174738.13 chr3:23962017:+ NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr11--chr3]"] CCDC25--ZNF337 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC25^ENSG00000147419.19 chr8:27772513:- ZNF337^ENSG00000130684.14 chr20:25675278:- YES_LDAS 0.0034 GT 1.8062 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr20]"] CCDC24--GIPR 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC24^ENSG00000159214.13 chr1:43993964:+ GIPR^ENSG00000010310.9 chr19:45676949:+ NO_LDAS 0.0034 GT 1.8256 AG 1.4566 ["INTERCHROMOSOMAL[chr1--chr19]"] CCDC159--ASB4 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC159^ENSG00000183401.12 chr19:11345311:+ ASB4^ENSG00000005981.13 chr7:95528330:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr7]"] CCDC151--KRT80 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC151^ENSG00000198003.12 chr19:11423925:- KRT80^ENSG00000167767.14 chr12:52172280:- NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr12]"] CCDC144B--AC120036.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCDC144B^ENSG00000154874.15 chr17:18588267:- AC120036.1^ENSG00000248347.3 chr8:47101192:- YES_LDAS 0.0017 GC 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr8]"] CCDC130--AC211476.4 1 0 0.07 0.00 INCL_NON_REF_SPLICE CCDC130^ENSG00000104957.14 chr19:13732285:+ AC211476.4^ENSG00000277125.1 chr7:73065531:+ YES_LDAS 0.0002 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr7]"] CCDC126--FAM221A 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC126^ENSG00000169193.12 chr7:23611553:+ FAM221A^ENSG00000188732.11 chr7:23689269:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5546 ["INTRACHROMOSOMAL[chr7:0.04Mb]","NEIGHBORS[35422]"] CCDC107--SPATA7 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCDC107^ENSG00000159884.12 chr9:35660461:+ SPATA7^ENSG00000042317.17 chr14:88391385:+ NO_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr14]"] CCDC107--MAN1B1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC107^ENSG00000159884.12 chr9:35660969:+ MAN1B1^ENSG00000177239.15 chr9:137101484:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5850 ["INTRACHROMOSOMAL[chr9:101.43Mb]"] CBX8--RFLNB 1 0 0.33 0.00 INCL_NON_REF_SPLICE CBX8^ENSG00000141570.11 chr17:79793411:- RFLNB^ENSG00000183688.4 chr17:445939:- NO_LDAS 0.0011 GC 1.4716 AG 1.8892 ["INTRACHROMOSOMAL[chr17:79.35Mb]"] CBR4--DDX60L 1 0 1.00 0.00 ONLY_REF_SPLICE CBR4^ENSG00000145439.12 chr4:169002071:- DDX60L^ENSG00000181381.14 chr4:168472809:- YES_LDAS 0.0034 GT 1.9899 AG 1.9899 ["INTRACHROMOSOMAL[chr4:0.33Mb]"] CBLN3--AMD1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CBLN3^ENSG00000139899.11 chr14:24429567:- AMD1^ENSG00000123505.19 chr6:110890201:+ NO_LDAS 0.0017 GT 1.8295 AG 1.5058 ["INTERCHROMOSOMAL[chr14--chr6]"] CATSPERB--TC2N 1 0 1.00 0.00 ONLY_REF_SPLICE CATSPERB^ENSG00000133962.8 chr14:91719418:- TC2N^ENSG00000165929.13 chr14:91792558:- NO_LDAS 0.0034 GT 1.6895 AG 1.7465 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[961]"] CATSPERB--TC2N 1 0 1.00 0.00 INCL_NON_REF_SPLICE CATSPERB^ENSG00000133962.8 chr14:91725075:- TC2N^ENSG00000165929.13 chr14:91783173:- YES_LDAS 0.0034 GT 1.7465 AG 1.8323 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[961]"] CASP9--RCC2 1 0 1.00 0.00 ONLY_REF_SPLICE CASP9^ENSG00000132906.18 chr1:15518110:- RCC2^ENSG00000179051.14 chr1:17422836:- YES_LDAS 0.0034 GT 1.7056 AG 1.7056 ["INTRACHROMOSOMAL[chr1:1.88Mb]"] CASK--IKZF1 1 0 1.00 0.00 ONLY_REF_SPLICE CASK^ENSG00000147044.23 chrX:41922930:- IKZF1^ENSG00000185811.19 chr7:50376533:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr7]"] CASK--IGBP1 1 0 0.50 0.00 ONLY_REF_SPLICE CASK^ENSG00000147044.23 chrX:41922930:- IGBP1^ENSG00000089289.16 chrX:70146633:+ YES_LDAS 0.0017 GT 1.8323 AG 1.5546 ["INTRACHROMOSOMAL[chrX:28.21Mb]"] CASK--CEP170 1 0 1.00 0.00 ONLY_REF_SPLICE CASK^ENSG00000147044.23 chrX:41922930:- CEP170^ENSG00000143702.16 chr1:243225321:- YES_LDAS 0.0034 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr1]"] CARS1--S100PBP 1 0 1.00 0.00 ONLY_REF_SPLICE CARS1^ENSG00000110619.18 chr11:3015781:- S100PBP^ENSG00000116497.18 chr1:32826098:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr1]"] CAPZA1--RSBN1 1 0 1.00 0.00 ONLY_REF_SPLICE CAPZA1^ENSG00000116489.13 chr1:112659779:+ RSBN1^ENSG00000081019.13 chr1:113777808:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr1:1.09Mb]"] CAPRIN1--ENO1 1 0 1.00 0.00 ONLY_REF_SPLICE CAPRIN1^ENSG00000135387.21 chr11:34097761:+ ENO1^ENSG00000074800.16 chr1:8865482:- YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr1]"] CAPN13--RASA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CAPN13^ENSG00000162949.16 chr2:30775955:- RASA3^ENSG00000185989.11 chr13:113999659:- YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr13]"] CAMK4--CDKAL1 1 0 1.00 0.00 ONLY_REF_SPLICE CAMK4^ENSG00000152495.11 chr5:111344102:+ CDKAL1^ENSG00000145996.11 chr6:20758595:+ YES_LDAS 0.0034 GT 1.6729 AG 1.9329 ["INTERCHROMOSOMAL[chr5--chr6]"] CAMK1D--CELF2 1 0 1.00 0.00 ONLY_REF_SPLICE CAMK1D^ENSG00000183049.13 chr10:12349910:+ CELF2^ENSG00000048740.18 chr10:11314139:+ NO_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr10:1.01Mb]"] CALR4P--CARF 1 0 0.50 0.00 ONLY_REF_SPLICE CALR4P^ENSG00000227742.2 chr1:51582824:- CARF^ENSG00000138380.18 chr2:202952559:+ NO_LDAS 0.0017 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr2]"] CACNB4--LONRF2 1 0 1.00 0.00 ONLY_REF_SPLICE CACNB4^ENSG00000182389.20 chr2:152098330:- LONRF2^ENSG00000170500.13 chr2:100309225:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr2:51.51Mb]"] CACHD1--RIN2 1 0 1.00 0.00 ONLY_REF_SPLICE CACHD1^ENSG00000158966.16 chr1:64470942:+ RIN2^ENSG00000132669.14 chr20:19935099:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr20]"] CABP7--RNF149 1 0 1.00 0.00 INCL_NON_REF_SPLICE CABP7^ENSG00000100314.4 chr22:29720066:+ RNF149^ENSG00000163162.9 chr2:101308288:- NO_LDAS 0.0034 GC 1.5329 AG 1.2729 ["INTERCHROMOSOMAL[chr22--chr2]"] CABLES2--RAPGEF6 1 0 1.00 0.00 INCL_NON_REF_SPLICE CABLES2^ENSG00000149679.11 chr20:62391029:- RAPGEF6^ENSG00000158987.22 chr5:131635046:- YES_LDAS 0.0034 GT 1.8256 AG 1.7056 ["INTERCHROMOSOMAL[chr20--chr5]"] CA13--CA3 1 0 1.00 0.00 ONLY_REF_SPLICE CA13^ENSG00000185015.8 chr8:85268627:+ CA3^ENSG00000164879.7 chr8:85439712:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] CA13--CA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CA13^ENSG00000185015.8 chr8:85281639:+ CA3^ENSG00000164879.7 chr8:85439712:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] C9orf78--OAZ1 1 0 1.00 0.00 INCL_NON_REF_SPLICE C9orf78^ENSG00000136819.15 chr9:129828171:- OAZ1^ENSG00000104904.12 chr19:2271491:+ YES_LDAS 0.0034 GC 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr19]"] C8orf49--PDS5B 1 0 0.33 0.00 INCL_NON_REF_SPLICE C8orf49^ENSG00000255394.4 chr8:11762241:+ PDS5B^ENSG00000083642.19 chr13:32770358:+ NO_LDAS 0.0011 GT 1.2419 AG 1.7056 ["INTERCHROMOSOMAL[chr8--chr13]"] C7orf50--SYPL1 1 0 1.00 0.00 ONLY_REF_SPLICE C7orf50^ENSG00000146540.15 chr7:1127257:- SYPL1^ENSG00000008282.9 chr7:106099282:- NO_LDAS 0.0034 GT 1.7819 AG 1.5546 ["INTRACHROMOSOMAL[chr7:104.95Mb]"] C3orf35--PIK3R4 1 0 1.00 0.00 ONLY_REF_SPLICE C3orf35^ENSG00000198590.12 chr3:37399659:+ PIK3R4^ENSG00000196455.8 chr3:130723587:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr3:93.24Mb]"] C3orf33--SLC66A1L 1 0 1.00 0.00 ONLY_REF_SPLICE C3orf33^ENSG00000174928.16 chr3:155806139:- SLC66A1L^ENSG00000174899.12 chr3:157677525:+ YES_LDAS 0.0034 GT 1.7819 AG 1.6895 ["INTRACHROMOSOMAL[chr3:1.74Mb]"] C2CD6--TRAK2 1 0 1.00 0.00 ONLY_REF_SPLICE C2CD6^ENSG00000155754.15 chr2:201618900:- TRAK2^ENSG00000115993.13 chr2:201420706:- YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr2:0.04Mb]","NEIGHBORS[35921]"] C2CD5--HSPBAP1 1 0 1.00 0.00 ONLY_REF_SPLICE C2CD5^ENSG00000111731.12 chr12:22535258:- HSPBAP1^ENSG00000169087.11 chr3:122777906:- NO_LDAS 0.0034 GT 1.5301 AG 1.9219 ["INTERCHROMOSOMAL[chr12--chr3]"] C2CD5--CMTM6 1 0 1.00 0.00 ONLY_REF_SPLICE C2CD5^ENSG00000111731.12 chr12:22544061:- CMTM6^ENSG00000091317.8 chr3:32491886:- NO_LDAS 0.0034 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr12--chr3]"] C22orf34--UPK3BL1 1 0 0.50 0.00 ONLY_REF_SPLICE C22orf34^ENSG00000188511.12 chr22:49657405:- UPK3BL1^ENSG00000267368.1 chr7:102640773:- YES_LDAS 0.0017 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr22--chr7]"] C22orf34--TMEM241 1 0 0.25 0.00 ONLY_REF_SPLICE C22orf34^ENSG00000188511.12 chr22:49657405:- TMEM241^ENSG00000134490.14 chr18:23421444:- YES_LDAS 0.0008 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr18]"] C22orf15--PCK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE C22orf15^ENSG00000169314.15 chr22:23764103:+ PCK1^ENSG00000124253.11 chr20:57563063:+ NO_LDAS 0.0034 GT 1.5301 AG 1.8295 ["INTERCHROMOSOMAL[chr22--chr20]"] C1orf109--SLC66A1 1 0 1.00 0.00 ONLY_REF_SPLICE C1orf109^ENSG00000116922.14 chr1:37686273:- SLC66A1^ENSG00000040487.13 chr1:19328572:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr1:18.35Mb]"] C1orf109--DENR 1 0 1.00 0.00 ONLY_REF_SPLICE C1orf109^ENSG00000116922.14 chr1:37690216:- DENR^ENSG00000139726.11 chr12:122768782:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr12]"] C1QTNF2--CCNJL 1 0 1.00 0.00 ONLY_REF_SPLICE C1QTNF2^ENSG00000145861.9 chr5:160354768:- CCNJL^ENSG00000135083.16 chr5:160280738:- YES_LDAS 0.0034 GT 1.4295 AG 1.9329 ["INTRACHROMOSOMAL[chr5:0.00Mb]","NEIGHBORS[2358]"] C1GALT1--SNX13 1 0 1.00 0.00 ONLY_REF_SPLICE C1GALT1^ENSG00000106392.11 chr7:7182820:+ SNX13^ENSG00000071189.21 chr7:17897446:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr7:10.54Mb]"] C17orf49--AL137222.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE C17orf49^ENSG00000258315.5 chr17:7015402:+ AL137222.1^ENSG00000218857.1 chr6:131184771:- NO_LDAS 0.0017 GC 1.2729 AG 1.2310 ["INTERCHROMOSOMAL[chr17--chr6]"] C12orf76--TBC1D25 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf76^ENSG00000174456.15 chr12:110048363:- TBC1D25^ENSG00000068354.16 chrX:48558897:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chrX]"] C12orf75--UBE2N 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf75^ENSG00000235162.9 chr12:105330937:+ UBE2N^ENSG00000177889.10 chr12:93411299:- NO_LDAS 0.0034 GT 1.3996 AG 1.9899 ["INTRACHROMOSOMAL[chr12:11.79Mb]"] C12orf75--CSNK2A1 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf75^ENSG00000235162.9 chr12:105348626:+ CSNK2A1^ENSG00000101266.19 chr20:508660:- YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr20]"] C11orf49--EPHX2 1 0 1.00 0.00 ONLY_REF_SPLICE C11orf49^ENSG00000149179.14 chr11:46936851:+ EPHX2^ENSG00000120915.14 chr8:27540554:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr8]"] BUD13--PRDM16 1 0 1.00 0.00 INCL_NON_REF_SPLICE BUD13^ENSG00000137656.12 chr11:116762837:- PRDM16^ENSG00000142611.17 chr1:3186265:+ NO_LDAS 0.0034 AT 1.6402 AC 1.8892 ["INTERCHROMOSOMAL[chr11--chr1]"] BUB3--LINC02641 1 0 1.00 0.00 ONLY_REF_SPLICE BUB3^ENSG00000154473.18 chr10:123162828:+ LINC02641^ENSG00000230131.6 chr10:123361319:+ YES_LDAS 0.0034 GT 1.1589 AG 1.5058 ["INTRACHROMOSOMAL[chr10:0.19Mb]"] BTRC--HNRNPLL 1 0 1.00 0.00 ONLY_REF_SPLICE BTRC^ENSG00000166167.18 chr10:101354228:+ HNRNPLL^ENSG00000143889.16 chr2:38585881:- YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr10--chr2]"] BTN3A3--SPATA41 1 0 1.00 0.00 INCL_NON_REF_SPLICE BTN3A3^ENSG00000111801.16 chr6:26444139:+ SPATA41^ENSG00000189419.8 chr15:100348036:- NO_LDAS 0.0034 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr15]"] BTBD6--TENT5A 1 0 1.00 0.00 INCL_NON_REF_SPLICE BTBD6^ENSG00000184887.13 chr14:105250060:+ TENT5A^ENSG00000112773.16 chr6:81752598:- YES_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr14--chr6]"] BTBD10--FAR1 1 0 1.00 0.00 ONLY_REF_SPLICE BTBD10^ENSG00000148925.11 chr11:13463092:- FAR1^ENSG00000197601.13 chr11:13721730:+ NO_LDAS 0.0034 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr11:0.21Mb]"] BTBD10--FAR1 1 0 1.00 0.00 ONLY_REF_SPLICE BTBD10^ENSG00000148925.11 chr11:13463092:- FAR1^ENSG00000197601.13 chr11:13694759:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr11:0.21Mb]"] BTAF1--APIP 1 0 1.00 0.00 INCL_NON_REF_SPLICE BTAF1^ENSG00000095564.14 chr10:91953873:+ APIP^ENSG00000149089.13 chr11:34855986:- NO_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr11]"] BRWD3--POLA1 1 0 1.00 0.00 ONLY_REF_SPLICE BRWD3^ENSG00000165288.11 chrX:80791854:- POLA1^ENSG00000101868.13 chrX:24699425:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chrX:55.67Mb]"] BRWD3--CHM 1 0 1.00 0.00 ONLY_REF_SPLICE BRWD3^ENSG00000165288.11 chrX:80791854:- CHM^ENSG00000188419.14 chrX:85964052:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chrX:5.05Mb]"] BRCA2--LINC01606 1 0 1.00 0.00 INCL_NON_REF_SPLICE BRCA2^ENSG00000139618.17 chr13:32363533:+ LINC01606^ENSG00000253301.6 chr8:57232152:+ NO_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr13--chr8]"] BRCA2--AC011246.1 1 0 1.00 0.00 ONLY_REF_SPLICE BRCA2^ENSG00000139618.17 chr13:32396116:+ AC011246.1^ENSG00000286481.1 chr2:121944334:+ NO_LDAS 0.0034 GT 1.9656 AG 1.6049 ["INTERCHROMOSOMAL[chr13--chr2]"] BPTFP1--KPNA2 1 0 1.00 0.00 INCL_NON_REF_SPLICE BPTFP1^ENSG00000263647.1 chr17:64761916:- KPNA2^ENSG00000182481.10 chr17:68037110:+ NO_LDAS 0.0034 GT 1.9656 AG 1.2729 ["INTRACHROMOSOMAL[chr17:3.27Mb]"] BPNT1--DNAJB4 1 0 1.00 0.00 ONLY_REF_SPLICE BPNT1^ENSG00000162813.18 chr1:220079727:- DNAJB4^ENSG00000162616.9 chr1:78016014:+ NO_LDAS 0.0034 GT 1.5301 AG 1.7819 ["INTRACHROMOSOMAL[chr1:142.04Mb]"] BOLA2B--CFAP74 1 0 1.00 0.00 INCL_NON_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193533:- CFAP74^ENSG00000142609.18 chr1:1974131:- NO_LDAS 0.0034 GT 1.7232 AG 1.6729 ["INTERCHROMOSOMAL[chr16--chr1]"] BMS1P23--AL845331.1 1 0 0.14 0.00 INCL_NON_REF_SPLICE BMS1P23^ENSG00000286156.1 chr2:94196055:- AL845331.1^ENSG00000259916.1 chr2:94588497:+ YES_LDAS 0.0005 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr2:0.38Mb]"] BMS1P10--AQP7P2 1 0 0.33 0.00 INCL_NON_REF_SPLICE BMS1P10^ENSG00000237238.3 chr9:63309142:- AQP7P2^ENSG00000181997.8 chr9:64643025:- YES_LDAS 0.0011 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr9:1.24Mb]"] BMS1P1--MAPK14 1 0 0.33 0.00 ONLY_REF_SPLICE BMS1P1^ENSG00000204177.10 chr10:46798168:+ MAPK14^ENSG00000112062.11 chr6:36052699:+ YES_LDAS 0.0011 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr6]"] BMS1--DOCK7 1 0 1.00 0.00 ONLY_REF_SPLICE BMS1^ENSG00000165733.8 chr10:42787247:+ DOCK7^ENSG00000116641.18 chr1:62619993:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr1]"] BMPER--BBS9 1 0 1.00 0.00 ONLY_REF_SPLICE BMPER^ENSG00000164619.10 chr7:33974784:+ BBS9^ENSG00000122507.21 chr7:33357855:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9899 ["DEEPEST2019","INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:+:[27128]"] BMP7-AS1--IARS2 1 0 0.50 0.00 INCL_NON_REF_SPLICE BMP7-AS1^ENSG00000235032.1 chr20:57215808:+ IARS2^ENSG00000067704.10 chr1:220102248:+ NO_LDAS 0.0017 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr20--chr1]"] BLMH--DNAAF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE BLMH^ENSG00000108578.15 chr17:30291825:- DNAAF2^ENSG00000165506.15 chr14:49633864:- NO_LDAS 0.0034 GC 1.5329 AG 1.9086 ["INTERCHROMOSOMAL[chr17--chr14]"] BIN2--CGGBP1 1 0 1.00 0.00 ONLY_REF_SPLICE BIN2^ENSG00000110934.13 chr12:51313823:- CGGBP1^ENSG00000163320.12 chr3:88058223:- NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"] BICDL1--MAPK8IP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE BICDL1^ENSG00000135127.11 chr12:119990217:+ MAPK8IP2^ENSG00000008735.14 chr22:50604485:+ NO_LDAS 0.0017 GT 1.3996 AG 1.4295 ["INTERCHROMOSOMAL[chr12--chr22]"] BICDL1--CADM2 1 0 0.50 0.00 INCL_NON_REF_SPLICE BICDL1^ENSG00000135127.11 chr12:119990217:+ CADM2^ENSG00000175161.14 chr3:84959129:+ NO_LDAS 0.0017 GT 1.3996 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] BICD1--SLC2A13 1 0 1.00 0.00 ONLY_REF_SPLICE BICD1^ENSG00000151746.15 chr12:32107544:+ SLC2A13^ENSG00000151229.13 chr12:39951365:- YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr12:7.37Mb]"] BET1--AKR1E2 1 0 1.00 0.00 INCL_NON_REF_SPLICE BET1^ENSG00000105829.13 chr7:93965570:- AKR1E2^ENSG00000165568.18 chr10:4830675:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr10]"] BCL2L13--C1orf158 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCL2L13^ENSG00000099968.18 chr22:17655832:+ C1orf158^ENSG00000157330.10 chr1:12761564:+ NO_LDAS 0.0034 GT 1.7465 AG 1.5219 ["INTERCHROMOSOMAL[chr22--chr1]"] BCL2--AC092652.2 1 0 1.00 0.00 ONLY_REF_SPLICE BCL2^ENSG00000171791.14 chr18:63318082:- AC092652.2^ENSG00000283994.1 chr2:143606746:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7968 ["INTERCHROMOSOMAL[chr18--chr2]"] BCKDHB--AL359715.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.4^ENSG00000279022.1 chr6:80440685:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[94460]"] BCKDHB--AC005618.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80169030:+ AC005618.1^ENSG00000272070.1 chr5:141326449:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr5]"] BCAT1--SOX5 1 0 1.00 0.00 ONLY_REF_SPLICE BCAT1^ENSG00000060982.15 chr12:24842082:- SOX5^ENSG00000134532.19 chr12:24277312:- YES_LDAS 0.0034 GT 1.5058 AG 1.6895 ["INTRACHROMOSOMAL[chr12:0.25Mb]"] BCAN--AC007098.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCAN^ENSG00000132692.19 chr1:156646942:+ AC007098.1^ENSG00000231609.7 chr2:62957458:- NO_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr2]"] BBS4--SUGT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BBS4^ENSG00000140463.14 chr15:72724655:+ SUGT1^ENSG00000165416.15 chr13:52698626:+ NO_LDAS 0.0034 GT 1.6895 AG 1.4295 ["INTERCHROMOSOMAL[chr15--chr13]"] BAZ1A--UBAP2 1 0 1.00 0.00 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34792775:- UBAP2^ENSG00000137073.23 chr9:33996333:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr9]"] BANP--RNF166 1 0 1.00 0.00 ONLY_REF_SPLICE BANP^ENSG00000172530.20 chr16:88038011:+ RNF166^ENSG00000158717.11 chr16:88701418:- YES_LDAS 0.0034 GT 1.6729 AG 1.6402 ["INTRACHROMOSOMAL[chr16:0.62Mb]"] BACH1--RNF169 1 0 1.00 0.00 ONLY_REF_SPLICE BACH1^ENSG00000156273.16 chr21:29299598:+ RNF169^ENSG00000166439.6 chr11:74789626:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr21--chr11]"] BABAM2--MAPKAP1 1 0 1.00 0.00 ONLY_REF_SPLICE BABAM2^ENSG00000158019.21 chr2:28298491:+ MAPKAP1^ENSG00000119487.17 chr9:125669907:- YES_LDAS 0.0034 GT 1.4566 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr9]"] B4GALT5--AL022341.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE B4GALT5^ENSG00000158470.5 chr20:49637353:- AL022341.2^ENSG00000262528.2 chr16:655858:- NO_LDAS 0.0034 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr20--chr16]"] B4GALT1--SMU1 1 0 1.00 0.00 ONLY_REF_SPLICE B4GALT1^ENSG00000086062.13 chr9:33135189:- SMU1^ENSG00000122692.9 chr9:33068934:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["ChimerSeq","INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[27408]"] ATP6V1G2--OR2T12 1 0 0.25 0.00 INCL_NON_REF_SPLICE ATP6V1G2^ENSG00000213760.11 chr6:31548334:- OR2T12^ENSG00000177201.2 chr1:248295284:- NO_LDAS 0.0008 GT 1.7465 AG 1.2729 ["INTERCHROMOSOMAL[chr6--chr1]"] ATP5MC1P1--ATP5MC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5MC1P1^ENSG00000230157.1 chr14:105537214:- ATP5MC1^ENSG00000159199.14 chr17:48894372:+ NO_LDAS 0.0034 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr14--chr17]"] ATG13--RAX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46657154:+ RAX2^ENSG00000173976.16 chr19:3769425:- NO_LDAS 0.0034 GT 1.4295 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr19]"] ATG13--CRCP 1 0 1.00 0.00 ONLY_REF_SPLICE ATG13^ENSG00000175224.16 chr11:46630100:+ CRCP^ENSG00000241258.7 chr7:66130744:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr7]"] ATF6--CRYZL2P 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATF6^ENSG00000118217.7 chr1:161778324:+ CRYZL2P^ENSG00000242193.11 chr1:178026203:- YES_LDAS 0.0034 GT 1.8062 AG 1.7968 ["INTRACHROMOSOMAL[chr1:16.03Mb]"] ATE1--BCCIP 1 0 1.00 0.00 ONLY_REF_SPLICE ATE1^ENSG00000107669.18 chr10:121927844:- BCCIP^ENSG00000107949.17 chr10:125831420:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr10:3.90Mb]"] ASS1--SFXN5 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASS1^ENSG00000130707.18 chr9:130458430:+ SFXN5^ENSG00000144040.13 chr2:73070496:- NO_LDAS 0.0034 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr9--chr2]"] ASH2L--JAKMIP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASH2L^ENSG00000129691.16 chr8:38121009:+ JAKMIP3^ENSG00000188385.12 chr10:132183014:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr10]"] ASH1L-AS1--CD52 1 0 0.50 0.00 INCL_NON_REF_SPLICE ASH1L-AS1^ENSG00000235919.4 chr1:155563329:+ CD52^ENSG00000169442.9 chr1:26320171:+ NO_LDAS 0.0017 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr1:129.24Mb]"] ASCC3--ZNF587 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASCC3^ENSG00000112249.14 chr6:100857872:- ZNF587^ENSG00000198466.12 chr19:57859141:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr19]"] ASCC3--CDRT1 1 0 0.50 0.00 ONLY_REF_SPLICE ASCC3^ENSG00000112249.14 chr6:100766565:- CDRT1^ENSG00000241322.11 chr17:15615809:- YES_LDAS 0.0017 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr17]"] ARSL--ARSH 1 0 1.00 0.00 ONLY_REF_SPLICE ARSL^ENSG00000157399.16 chrX:2938095:- ARSH^ENSG00000205667.3 chrX:3029247:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.04Mb]","LOCAL_INVERSION:-:+:[38071]"] ARSI--CAMK2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARSI^ENSG00000183876.9 chr5:150297421:- CAMK2A^ENSG00000070808.16 chr5:150273159:- NO_LDAS 0.0034 GT 1.6729 AG 1.8062 ["INTRACHROMOSOMAL[chr5:0.01Mb]","NEIGHBORS[6052]"] ARPP19--PLEKHA1 1 0 1.00 0.00 ONLY_REF_SPLICE ARPP19^ENSG00000128989.11 chr15:52568848:- PLEKHA1^ENSG00000107679.14 chr10:122392303:+ YES_LDAS 0.0034 GT 1.3996 AG 1.8062 ["INTERCHROMOSOMAL[chr15--chr10]"] ARNT2--MESD 1 0 1.00 0.00 ONLY_REF_SPLICE ARNT2^ENSG00000172379.21 chr15:80450994:+ MESD^ENSG00000117899.11 chr15:80952296:- YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr15:0.35Mb]"] ARMCX6--CHMP4B 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARMCX6^ENSG00000198960.11 chrX:101617301:- CHMP4B^ENSG00000101421.4 chr20:33811520:+ NO_LDAS 0.0034 GT 1.6402 AG 1.2310 ["INTERCHROMOSOMAL[chrX--chr20]"] ARMC7--DRG1 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC7^ENSG00000125449.7 chr17:75110606:+ DRG1^ENSG00000185721.13 chr22:31508255:+ YES_LDAS 0.0034 GT 1.6895 AG 1.5219 ["INTERCHROMOSOMAL[chr17--chr22]"] ARMC4--DPM1 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC4^ENSG00000169126.16 chr10:27853242:- DPM1^ENSG00000000419.13 chr20:50948662:- NO_LDAS 0.0034 GC 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr20]"] ARLNC1--TERF1P6 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARLNC1^ENSG00000260896.6 chr16:80838232:- TERF1P6^ENSG00000223824.1 chr2:189917510:- NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr2]"] ARL6IP6--PRXL2C 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARL6IP6^ENSG00000177917.11 chr2:152735130:+ PRXL2C^ENSG00000158122.12 chr9:96651483:- NO_LDAS 0.0034 GT 1.9656 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr9]"] ARL5B--RSU1 1 0 1.00 0.00 ONLY_REF_SPLICE ARL5B^ENSG00000165997.5 chr10:18659683:+ RSU1^ENSG00000148484.18 chr10:16754989:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr10:1.84Mb]"] ARL5A--EFR3A 1 0 1.00 0.00 ONLY_REF_SPLICE ARL5A^ENSG00000162980.17 chr2:151828131:- EFR3A^ENSG00000132294.15 chr8:131940499:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr8]"] ARL10--OR10AH1P 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARL10^ENSG00000175414.7 chr5:176368982:+ OR10AH1P^ENSG00000272595.2 chr7:5119670:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7232 ["INTERCHROMOSOMAL[chr5--chr7]"] ARIH2--TMEM190 1 0 1.00 0.00 ONLY_REF_SPLICE ARIH2^ENSG00000177479.20 chr3:48921576:+ TMEM190^ENSG00000160472.5 chr19:55376991:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr19]"] ARIH2--FZR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARIH2^ENSG00000177479.20 chr3:48921576:+ FZR1^ENSG00000105325.15 chr19:3510158:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr3--chr19]"] ARHGEF9--LINC01278 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGEF9^ENSG00000131089.17 chrX:63638050:- LINC01278^ENSG00000235437.8 chrX:63432491:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chrX:0.07Mb]","NEIGHBORS[73872]"] ARHGEF3--SLC7A6 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGEF3^ENSG00000163947.12 chr3:56801703:- SLC7A6^ENSG00000103064.15 chr16:68266593:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr16]"] ARHGAP39--L3MBTL3 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP39^ENSG00000147799.11 chr8:144605535:- L3MBTL3^ENSG00000198945.8 chr6:130022227:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr6]"] ARHGAP24--TPK1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP24^ENSG00000138639.18 chr4:85923770:+ TPK1^ENSG00000196511.14 chr7:144765951:- NO_LDAS 0.0034 GT 1.9219 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr7]"] ARHGAP15--ADA2 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP15^ENSG00000075884.14 chr2:143250600:+ ADA2^ENSG00000093072.18 chr22:17191810:- YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr22]"] ARF3--AHSA2P 1 0 1.00 0.00 ONLY_REF_SPLICE ARF3^ENSG00000134287.10 chr12:48939655:- AHSA2P^ENSG00000173209.23 chr2:61178981:+ NO_LDAS 0.0034 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr2]"] AREL1--CEP57L1 1 0 0.50 0.00 ONLY_REF_SPLICE AREL1^ENSG00000119682.18 chr14:74683296:- CEP57L1^ENSG00000183137.15 chr6:109146758:+ YES_LDAS 0.0017 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr14--chr6]"] ARCN1--UBE4A 1 0 1.00 0.00 ONLY_REF_SPLICE ARCN1^ENSG00000095139.14 chr11:118572550:+ UBE4A^ENSG00000110344.10 chr11:118381391:+ NO_LDAS 0.0034 GT 1.7232 AG 1.6895 ["INTRACHROMOSOMAL[chr11:0.17Mb]"] ARAP2--SLC8A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARAP2^ENSG00000047365.12 chr4:36121179:- SLC8A1^ENSG00000183023.18 chr2:40113310:- NO_LDAS 0.0034 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr2]"] APOLD1--NPAT 1 0 1.00 0.00 ONLY_REF_SPLICE APOLD1^ENSG00000178878.13 chr12:12814224:+ NPAT^ENSG00000149308.17 chr11:108177090:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr11]"] APOL2--DDX60L 1 0 1.00 0.00 ONLY_REF_SPLICE APOL2^ENSG00000128335.14 chr22:36239441:- DDX60L^ENSG00000181381.14 chr4:168462040:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr4]"] APOBEC3F--TECR 1 0 0.50 0.00 INCL_NON_REF_SPLICE APOBEC3F^ENSG00000128394.17 chr22:39054958:+ TECR^ENSG00000099797.15 chr19:14529703:+ NO_LDAS 0.0017 GT 1.2366 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr19]"] AP5M1--EXOC5 1 0 1.00 0.00 ONLY_REF_SPLICE AP5M1^ENSG00000053770.12 chr14:57269388:+ EXOC5^ENSG00000070367.16 chr14:57247712:- YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_INVERSION:+:-:[19]"] AP4E1--CD300A 1 0 1.00 0.00 ONLY_REF_SPLICE AP4E1^ENSG00000081014.11 chr15:50968377:+ CD300A^ENSG00000167851.15 chr17:74477436:+ NO_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr15--chr17]"] AP3S1--RALGAPB 1 0 1.00 0.00 ONLY_REF_SPLICE AP3S1^ENSG00000177879.17 chr5:115870128:+ RALGAPB^ENSG00000170471.15 chr20:38509077:+ YES_LDAS 0.0034 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr20]"] AP006294.2--LINC00665 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP006294.2^ENSG00000284639.1 chr11:3580927:- LINC00665^ENSG00000232677.9 chr19:36329430:- YES_LDAS 0.0034 GT 1.4566 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr19]"] AP006294.2--AP003498.2 1 0 1.00 0.00 ONLY_REF_SPLICE AP006294.2^ENSG00000284639.1 chr11:3580927:- AP003498.2^ENSG00000285933.1 chr11:71746589:+ YES_LDAS 0.0034 GT 1.4566 AG 1.7465 ["INTRACHROMOSOMAL[chr11:68.16Mb]"] AP003108.2--PPP1R32 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP003108.2^ENSG00000256591.5 chr11:61468714:+ PPP1R32^ENSG00000162148.11 chr11:61484688:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[12404]"] AP002807.1--NFKBIL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP002807.1^ENSG00000255031.5 chr11:68052237:+ NFKBIL1^ENSG00000204498.11 chr6:31558228:+ NO_LDAS 0.0034 GT 1.3996 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr6]"] AP002748.4--RBM4B 1 0 1.00 0.00 ONLY_REF_SPLICE AP002748.4^ENSG00000255517.6 chr11:66480039:- RBM4B^ENSG00000173914.12 chr11:66677091:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr11:0.18Mb]"] AP001825.3--INO80B 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001825.3^ENSG00000276179.1 chr11:84890911:+ INO80B^ENSG00000115274.15 chr2:74457688:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6049 ["INTERCHROMOSOMAL[chr11--chr2]"] AP001056.2--SH3RF3 1 0 0.33 0.00 INCL_NON_REF_SPLICE AP001056.2^ENSG00000285413.1 chr21:44194201:- SH3RF3^ENSG00000172985.11 chr2:109398776:+ NO_LDAS 0.0011 GT 1.8295 AG 1.7465 ["INTERCHROMOSOMAL[chr21--chr2]"] AP000959.1--GJB1 1 0 1.00 0.00 ONLY_REF_SPLICE AP000959.1^ENSG00000234034.1 chr21:22519868:- GJB1^ENSG00000169562.13 chrX:71223692:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7465 ["INTERCHROMOSOMAL[chr21--chrX]"] AP000892.4--NAGK 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP000892.4^ENSG00000280143.1 chr11:117210218:+ NAGK^ENSG00000124357.13 chr2:71070741:+ NO_LDAS 0.0034 GT 1.4295 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr2]"] AP000654.1--FOXL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP000654.1^ENSG00000269895.1 chr11:86833071:+ FOXL1^ENSG00000176678.6 chr16:86578573:+ YES_LDAS 0.0034 GT 1.5301 AG 1.5058 ["INTERCHROMOSOMAL[chr11--chr16]"] AP000593.1--SAV1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP000593.1^ENSG00000213365.3 chr11:72281148:+ SAV1^ENSG00000151748.15 chr14:50644822:- NO_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr14]"] AOAH--AP001099.1 1 0 1.00 0.00 ONLY_REF_SPLICE AOAH^ENSG00000136250.12 chr7:36673943:- AP001099.1^ENSG00000265728.1 chr18:10595794:+ YES_LDAS 0.0034 GT 1.6729 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr18]"] ANXA7--AL591135.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANXA7^ENSG00000138279.16 chr10:73376192:- AL591135.1^ENSG00000218418.2 chr6:80067420:- NO_LDAS 0.0017 GT 1.4256 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr6]"] ANXA1--AC124852.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANXA1^ENSG00000135046.14 chr9:73163532:+ AC124852.1^ENSG00000248994.2 chr5:1958734:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr5]"] ANP32E--SEC62 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANP32E^ENSG00000143401.15 chr1:150226666:- SEC62^ENSG00000008952.17 chr3:169993007:+ NO_LDAS 0.0034 GT 1.9086 AG 1.2867 ["INTERCHROMOSOMAL[chr1--chr3]"] ANO7--TRIAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANO7^ENSG00000146205.14 chr2:241204959:+ TRIAP1^ENSG00000170855.4 chr12:120444669:- NO_LDAS 0.0017 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr12]"] ANO7--AL136115.3 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANO7^ENSG00000146205.14 chr2:241204959:+ AL136115.3^ENSG00000284702.1 chr1:31986933:- NO_LDAS 0.0017 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr1]"] ANO6--UHRF1BP1L 1 0 1.00 0.00 ONLY_REF_SPLICE ANO6^ENSG00000177119.17 chr12:45216391:+ UHRF1BP1L^ENSG00000111647.13 chr12:100128725:- NO_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTRACHROMOSOMAL[chr12:54.55Mb]"] ANO6--FANCC 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANO6^ENSG00000177119.17 chr12:45416855:+ FANCC^ENSG00000158169.13 chr9:95125125:- YES_LDAS 0.0034 AT 1.9329 AC 1.9086 ["INTERCHROMOSOMAL[chr12--chr9]"] ANO5--TSPAN32 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANO5^ENSG00000171714.12 chr11:22193532:+ TSPAN32^ENSG00000064201.16 chr11:2306941:+ NO_LDAS 0.0017 GT 1.6729 AG 0.9710 ["INTRACHROMOSOMAL[chr11:19.48Mb]"] ANO5--STK11IP 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANO5^ENSG00000171714.12 chr11:22193532:+ STK11IP^ENSG00000144589.22 chr2:219608340:+ NO_LDAS 0.0017 GT 1.6729 AG 0.9710 ["INTERCHROMOSOMAL[chr11--chr2]"] ANO10--ING5 1 0 1.00 0.00 ONLY_REF_SPLICE ANO10^ENSG00000160746.13 chr3:43652947:- ING5^ENSG00000168395.16 chr2:241704653:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr2]"] ANKRD62--ANKRD36 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANKRD62^ENSG00000181626.12 chr18:12127900:+ ANKRD36^ENSG00000135976.20 chr2:97249552:+ NO_LDAS 0.0017 GT 1.7968 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr18--chr2]"] ANKRD46--DNMT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKRD46^ENSG00000186106.11 chr8:100559373:- DNMT1^ENSG00000130816.17 chr19:10163360:- NO_LDAS 0.0034 GC 1.5546 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr19]"] ANKRD42--CDK17 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD42^ENSG00000137494.14 chr11:83198642:+ CDK17^ENSG00000059758.8 chr12:96313454:- NO_LDAS 0.0034 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr11--chr12]"] ANKRD42--BCL10 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD42^ENSG00000137494.14 chr11:83211430:+ BCL10^ENSG00000142867.14 chr1:85270906:- NO_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr1]"] ANKRD37--CYP4B1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKRD37^ENSG00000186352.9 chr4:185397332:+ CYP4B1^ENSG00000142973.14 chr1:46810817:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr1]"] ANKRD20A5P--ADAM21P1 1 0 0.20 0.00 INCL_NON_REF_SPLICE ANKRD20A5P^ENSG00000186481.16 chr18:14187694:+ ADAM21P1^ENSG00000235812.4 chr14:70247406:- NO_LDAS 0.0007 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr14]"] ANKRD13C--CYBRD1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ANKRD13C^ENSG00000118454.13 chr1:70313745:- CYBRD1^ENSG00000071967.12 chr2:171551134:+ YES_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] ANKRD12--MIB1 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD12^ENSG00000101745.17 chr18:9182519:+ MIB1^ENSG00000101752.12 chr18:21765772:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr18:12.42Mb]"] ANKRD12--C11orf49 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD12^ENSG00000101745.17 chr18:9136965:+ C11orf49^ENSG00000149179.14 chr11:46987208:+ YES_LDAS 0.0034 GT 1.5058 AG 1.9219 ["INTERCHROMOSOMAL[chr18--chr11]"] ANKMY2--BZW2 1 0 1.00 0.00 ONLY_REF_SPLICE ANKMY2^ENSG00000106524.9 chr7:16624983:- BZW2^ENSG00000136261.15 chr7:16674412:+ YES_LDAS 0.0034 GT 1.7819 AG 1.2419 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_INVERSION:-:+:[314]"] ANKFY1--PALD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKFY1^ENSG00000185722.18 chr17:4263684:- PALD1^ENSG00000107719.9 chr10:70525923:+ NO_LDAS 0.0034 GT 1.6402 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr10]"] ANKDD1A--CLEC14A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKDD1A^ENSG00000166839.17 chr15:64926976:+ CLEC14A^ENSG00000176435.7 chr14:38255731:- YES_LDAS 0.0034 GT 1.5656 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr14]"] AMMECR1--SLF2 1 0 1.00 0.00 ONLY_REF_SPLICE AMMECR1^ENSG00000101935.11 chrX:110216518:- SLF2^ENSG00000119906.13 chr10:100915999:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr10]"] AMMECR1--RPL30 1 0 0.17 0.00 INCL_NON_REF_SPLICE AMMECR1^ENSG00000101935.11 chrX:110317826:- RPL30^ENSG00000156482.11 chr8:98042694:- NO_LDAS 0.0006 AT 0.7219 AC 1.7968 ["INTERCHROMOSOMAL[chrX--chr8]"] AMER2--DGKH 1 0 1.00 0.00 INCL_NON_REF_SPLICE AMER2^ENSG00000165566.13 chr13:25169537:- DGKH^ENSG00000102780.17 chr13:42155291:+ YES_LDAS 0.0034 GT 1.7968 AG 1.5656 ["INTRACHROMOSOMAL[chr13:16.87Mb]"] AMER1--DIAPH2 1 0 1.00 0.00 ONLY_REF_SPLICE AMER1^ENSG00000184675.11 chrX:64205570:- DIAPH2^ENSG00000147202.18 chrX:97072941:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTRACHROMOSOMAL[chrX:32.48Mb]"] ALPK3--PCDH12 1 0 0.50 0.00 INCL_NON_REF_SPLICE ALPK3^ENSG00000136383.7 chr15:84827605:+ PCDH12^ENSG00000113555.6 chr5:141944569:- NO_LDAS 0.0017 GT 1.9219 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr5]"] ALDOB--PCYT1A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALDOB^ENSG00000136872.20 chr9:101420712:- PCYT1A^ENSG00000161217.12 chr3:196239600:- NO_LDAS 0.0034 GT 1.2729 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr3]"] ALDH7A1--AC091153.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALDH7A1^ENSG00000164904.18 chr5:126554305:- AC091153.2^ENSG00000235085.3 chr17:4691138:+ NO_LDAS 0.0034 GT 1.6895 AG 1.5628 ["INTERCHROMOSOMAL[chr5--chr17]"] ALDH18A1--PCGF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALDH18A1^ENSG00000059573.9 chr10:95611381:- PCGF2^ENSG00000277258.5 chr17:38735341:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr17]"] AL928711.1--SLC4A7 1 0 1.00 0.00 ONLY_REF_SPLICE AL928711.1^ENSG00000259984.1 chr1:25337040:- SLC4A7^ENSG00000033867.16 chr3:27424152:- YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr3]"] AL731559.1--SAFB 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL731559.1^ENSG00000285994.1 chr10:12563660:+ SAFB^ENSG00000160633.13 chr19:5654130:+ YES_LDAS 0.0034 GT 1.4295 AG 1.3996 ["INTERCHROMOSOMAL[chr10--chr19]"] AL691447.2--SOS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL691447.2^ENSG00000232063.2 chr9:94360820:+ SOS2^ENSG00000100485.12 chr14:50118737:- NO_LDAS 0.0034 GT 1.7465 AG 1.4256 ["INTERCHROMOSOMAL[chr9--chr14]"] AL596202.1--AC005785.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL596202.1^ENSG00000235381.1 chr6:155256617:- AC005785.1^ENSG00000268189.2 chr19:15380642:+ NO_LDAS 0.0034 GT 1.6729 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr19]"] AL589765.1--SNX27 1 0 1.00 0.00 ONLY_REF_SPLICE AL589765.1^ENSG00000227045.1 chr1:151701138:+ SNX27^ENSG00000143376.14 chr1:151683356:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[1935]"] AL589740.1--SIL1 1 0 1.00 0.00 ONLY_REF_SPLICE AL589740.1^ENSG00000271860.7 chr6:97306096:+ SIL1^ENSG00000120725.13 chr5:139051046:- YES_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr5]"] AL513493.1--MKS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL513493.1^ENSG00000285079.1 chr1:65713252:+ MKS1^ENSG00000011143.19 chr17:58206307:- NO_LDAS 0.0034 GT 1.6729 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr17]"] AL391058.1--AC117481.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL391058.1^ENSG00000232499.2 chr1:113449897:+ AC117481.1^ENSG00000287398.1 chr3:75214533:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] AL365295.1--AL356020.1 1 0 1.00 0.00 ONLY_REF_SPLICE AL365295.1^ENSG00000237356.7 chr14:53189936:+ AL356020.1^ENSG00000258731.1 chr14:53156243:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr14:0.01Mb]","LOCAL_REARRANGEMENT:+:[11482]"] AL358333.3--HNRNPD 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL358333.3^ENSG00000259007.1 chr14:51967154:- HNRNPD^ENSG00000138668.19 chr4:82359595:- YES_LDAS 0.0034 GC 0.8366 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] AL356512.1--UQCRQ 1 0 0.33 0.00 INCL_NON_REF_SPLICE AL356512.1^ENSG00000272195.1 chr1:244970658:- UQCRQ^ENSG00000164405.11 chr5:132867538:+ NO_LDAS 0.0011 GC 1.0530 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr5]"] AL355482.1--ZNF648 1 0 1.00 0.00 ONLY_REF_SPLICE AL355482.1^ENSG00000224810.1 chr1:182068317:- ZNF648^ENSG00000179930.6 chr1:182058073:- YES_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS[965]"] AL355312.3--PDXDC2P 1 0 1.00 0.00 ONLY_REF_SPLICE AL355312.3^ENSG00000273132.1 chr6:149852564:+ PDXDC2P^ENSG00000255185.6 chr16:70043003:- YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr16]"] AL353807.3--AC084198.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL353807.3^ENSG00000246203.2 chr1:155648406:- AC084198.1^ENSG00000286699.1 chr3:101692893:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr3]"] AL353795.3--AP002748.4 1 0 0.33 0.00 INCL_NON_REF_SPLICE AL353795.3^ENSG00000279608.1 chr9:35043714:- AP002748.4^ENSG00000255517.6 chr11:66473631:- NO_LDAS 0.0011 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr11]"] AL163952.1--SLC35A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL163952.1^ENSG00000259868.3 chr14:55957377:+ SLC35A2^ENSG00000102100.16 chrX:48904679:- NO_LDAS 0.0034 GT 1.4256 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chrX]"] AL161742.1--RPL19P5 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL161742.1^ENSG00000177452.7 chr1:63788927:- RPL19P5^ENSG00000230580.1 chr2:218354392:+ NO_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] AL160236.1--NFXL1 1 0 0.33 0.00 INCL_NON_REF_SPLICE AL160236.1^ENSG00000258656.1 chr14:60972314:- NFXL1^ENSG00000170448.12 chr4:47914205:- YES_LDAS 0.0011 GT 0.9968 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] AL157911.1--RTN1 1 0 1.00 0.00 ONLY_REF_SPLICE AL157911.1^ENSG00000258553.5 chr14:60057582:- RTN1^ENSG00000139970.17 chr14:59746481:- NO_LDAS 0.0034 GT 1.8892 AG 1.5628 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr14:0.10Mb]","NEIGHBORS[98340]"] AL157827.2--ABLIM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL157827.2^ENSG00000285650.1 chr9:92601767:- ABLIM2^ENSG00000163995.21 chr4:7965799:- NO_LDAS 0.0034 GT 1.7465 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr4]"] AL139353.1--PPP3CC 1 0 1.00 0.00 ONLY_REF_SPLICE AL139353.1^ENSG00000203546.7 chr14:31453275:- PPP3CC^ENSG00000120910.15 chr8:22474954:+ NO_LDAS 0.0034 GT 1.9329 AG 1.2729 ["INTERCHROMOSOMAL[chr14--chr8]"] AL139289.1--ZNF730 1 0 1.00 0.00 ONLY_REF_SPLICE AL139289.1^ENSG00000234694.1 chr1:43357803:- ZNF730^ENSG00000183850.14 chr19:23134080:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr19]"] AL139130.1--USP31 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL139130.1^ENSG00000237390.1 chr1:156393410:+ USP31^ENSG00000103404.14 chr16:23090687:- NO_LDAS 0.0034 GT 1.8295 AG 1.5656 ["INTERCHROMOSOMAL[chr1--chr16]"] AL137139.2--ZNF451 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL137139.2^ENSG00000286757.2 chr13:99854897:- ZNF451^ENSG00000112200.17 chr6:57133054:+ NO_LDAS 0.0017 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr13--chr6]"] AL137058.1--RUNDC1 1 0 0.17 0.00 ONLY_REF_SPLICE AL137058.1^ENSG00000244471.6 chr13:52522795:+ RUNDC1^ENSG00000198863.7 chr17:42990317:+ YES_LDAS 0.0006 GT 1.5850 AG 1.8323 ["INTERCHROMOSOMAL[chr13--chr17]"] AL135923.2--DMAC1 1 0 1.00 0.00 ONLY_REF_SPLICE AL135923.2^ENSG00000231902.2 chr9:7960830:- DMAC1^ENSG00000137038.8 chr9:7798637:- YES_LDAS 0.0034 GT 1.5058 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[26134]"] AL135908.1--MYL12A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL135908.1^ENSG00000230472.5 chr6:50596603:- MYL12A^ENSG00000101608.13 chr18:3255811:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr6--chr18]"] AL133216.2--AC138393.1 1 0 0.05 0.00 ONLY_REF_SPLICE AL133216.2^ENSG00000276805.2 chr10:38417204:+ AC138393.1^ENSG00000229930.1 chr1:224030796:- NO_LDAS 0.0002 GT 1.3996 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr1]"] AL117350.1--RAB4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL117350.1^ENSG00000237481.1 chr1:229323053:+ RAB4A^ENSG00000168118.12 chr1:229286486:+ YES_LDAS 0.0034 GT 1.9219 AG 1.2419 ["INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:+:[13509]"] AL079342.3--SYTL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL079342.3^ENSG00000280277.1 chr6:88965401:+ SYTL2^ENSG00000137501.17 chr11:85714507:- YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr11]"] AL049829.1--RPL39P15 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL049829.1^ENSG00000240131.1 chr14:23230095:- RPL39P15^ENSG00000231414.1 chr2:70253980:- NO_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr2]"] AL035701.1--ENPP4 1 0 1.00 0.00 ONLY_REF_SPLICE AL035701.1^ENSG00000231769.3 chr6:46129590:- ENPP4^ENSG00000001561.7 chr6:46139551:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTRACHROMOSOMAL[chr6:0.00Mb]","LOCAL_INVERSION:-:+:[132]"] AL035699.1--STX7 1 0 1.00 0.00 ONLY_REF_SPLICE AL035699.1^ENSG00000288529.1 chr6:133953425:+ STX7^ENSG00000079950.14 chr6:132503588:- YES_LDAS 0.0034 GT 1.4716 AG 1.9329 ["INTRACHROMOSOMAL[chr6:1.44Mb]"] AL035409.2--ST6GALNAC5 1 0 1.00 0.00 ONLY_REF_SPLICE AL035409.2^ENSG00000288543.1 chr1:77068843:+ ST6GALNAC5^ENSG00000117069.15 chr1:77050258:+ YES_LDAS 0.0034 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[374]"] AL034548.1--MFNG 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL034548.1^ENSG00000272874.1 chr20:268570:+ MFNG^ENSG00000100060.18 chr22:37485994:- NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr22]"] AL031121.2--ROCK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL031121.2^ENSG00000285564.2 chr6:163341565:- ROCK1^ENSG00000067900.8 chr18:20984535:- NO_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr18]"] AL022157.1--FAAH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL022157.1^ENSG00000226310.1 chrX:57127058:+ FAAH2^ENSG00000165591.7 chrX:57292498:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.16Mb]"] AL008707.1--TENM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL008707.1^ENSG00000232599.1 chrX:125185643:- TENM1^ENSG00000009694.13 chrX:124963817:- YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.24Mb]"] AKAP10--SP2-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AKAP10^ENSG00000108599.15 chr17:19924408:- SP2-AS1^ENSG00000234494.7 chr17:47900210:- NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTRACHROMOSOMAL[chr17:27.92Mb]"] AGO3--CSNK1G2-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE AGO3^ENSG00000126070.20 chr1:35931445:+ CSNK1G2-AS1^ENSG00000180846.8 chr19:1953011:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] AGBL5--PDE2A 1 0 1.00 0.00 ONLY_REF_SPLICE AGBL5^ENSG00000084693.16 chr2:27059404:+ PDE2A^ENSG00000186642.16 chr11:72581479:- YES_LDAS 0.0034 GT 1.8323 AG 1.5329 ["INTERCHROMOSOMAL[chr2--chr11]"] AGBL1--PER3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AGBL1^ENSG00000273540.5 chr15:86397371:+ PER3^ENSG00000049246.14 chr1:7798525:+ NO_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chr1]"] AFMID--TNFAIP1 1 0 1.00 0.00 ONLY_REF_SPLICE AFMID^ENSG00000183077.15 chr17:78191060:+ TNFAIP1^ENSG00000109079.10 chr17:28344364:+ NO_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTRACHROMOSOMAL[chr17:49.84Mb]"] AFG3L1P--GTF2F2 1 0 1.00 0.00 ONLY_REF_SPLICE AFG3L1P^ENSG00000223959.8 chr16:89972765:+ GTF2F2^ENSG00000188342.12 chr13:45207424:+ NO_LDAS 0.0034 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr13]"] AFAP1L2--CCSER2 1 0 1.00 0.00 ONLY_REF_SPLICE AFAP1L2^ENSG00000169129.15 chr10:114296978:- CCSER2^ENSG00000107771.17 chr10:84463933:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8062 ["INTRACHROMOSOMAL[chr10:29.78Mb]"] AF130359.1--LARP1B 1 0 1.00 0.00 ONLY_REF_SPLICE AF130359.1^ENSG00000237735.2 chr21:16755680:- LARP1B^ENSG00000138709.19 chr4:128199439:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr21--chr4]"] ADRA2C--MIR124-1HG 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADRA2C^ENSG00000184160.8 chr4:3767348:+ MIR124-1HG^ENSG00000253230.9 chr8:9903595:- NO_LDAS 0.0034 GC 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr8]"] ADNP2--AC097460.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE ADNP2^ENSG00000101544.9 chr18:80117650:+ AC097460.1^ENSG00000250403.1 chr4:99991357:- YES_LDAS 0.0011 GT 1.7819 AG 1.2310 ["INTERCHROMOSOMAL[chr18--chr4]"] ADNP--ZNF827 1 0 1.00 0.00 ONLY_REF_SPLICE ADNP^ENSG00000101126.18 chr20:50930826:- ZNF827^ENSG00000151612.18 chr4:145761598:- YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr20--chr4]"] ADIRF-AS1--L34079.3 1 0 0.33 0.00 INCL_NON_REF_SPLICE ADIRF-AS1^ENSG00000272734.1 chr10:86969268:- L34079.3^ENSG00000269583.1 chr19:43575412:+ NO_LDAS 0.0011 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr10--chr19]"] ADIPOR1--SPDL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADIPOR1^ENSG00000159346.13 chr1:202950930:- SPDL1^ENSG00000040275.17 chr5:169588462:+ NO_LDAS 0.0034 GT 1.2729 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr5]"] ADI1--AC006001.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADI1^ENSG00000182551.14 chr2:3500651:- AC006001.3^ENSG00000229180.7 chr7:66576929:- NO_LDAS 0.0034 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr7]"] ADGRL3-AS1--BDP1 1 0 1.00 0.00 ONLY_REF_SPLICE ADGRL3-AS1^ENSG00000248692.5 chr4:62155942:- BDP1^ENSG00000145734.19 chr5:71489404:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr5]"] ADGRG6--VTA1 1 0 1.00 0.00 ONLY_REF_SPLICE ADGRG6^ENSG00000112414.15 chr6:142309644:+ VTA1^ENSG00000009844.16 chr6:142166228:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.08Mb]","LOCAL_REARRANGEMENT:+:[77169]"] ADGRG6--CCDC47 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADGRG6^ENSG00000112414.15 chr6:142402052:+ CCDC47^ENSG00000108588.14 chr17:63746931:- NO_LDAS 0.0034 GT 1.8062 AG 1.6402 ["INTERCHROMOSOMAL[chr6--chr17]"] ADGRF1--TATDN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADGRF1^ENSG00000153292.16 chr6:47016658:- TATDN1^ENSG00000147687.19 chr8:124495174:- NO_LDAS 0.0034 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr6--chr8]"] ADD3-AS1--FAM13C 1 0 1.00 0.00 ONLY_REF_SPLICE ADD3-AS1^ENSG00000203876.10 chr10:109953756:- FAM13C^ENSG00000148541.13 chr10:59355943:- NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr10:50.58Mb]"] ADCY5--Z97200.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADCY5^ENSG00000173175.15 chr3:123320749:- Z97200.1^ENSG00000271811.1 chr1:170668663:+ NO_LDAS 0.0034 GT 1.5058 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr1]"] ADARB1--F11 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADARB1^ENSG00000197381.16 chr21:45171684:+ F11^ENSG00000088926.14 chr4:186280367:+ NO_LDAS 0.0034 GT 1.5546 AG 1.9086 ["INTERCHROMOSOMAL[chr21--chr4]"] ADAMTSL1--ZNF785 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADAMTSL1^ENSG00000178031.18 chr9:18574048:+ ZNF785^ENSG00000197162.10 chr16:30583443:- NO_LDAS 0.0034 GT 1.5656 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr16]"] ADAMTS8--AL355312.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADAMTS8^ENSG00000134917.10 chr11:130427567:- AL355312.3^ENSG00000273132.1 chr6:149853117:+ NO_LDAS 0.0034 GT 1.6895 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr6]"] ADAM17--TAF1B 1 0 1.00 0.00 ONLY_REF_SPLICE ADAM17^ENSG00000151694.14 chr2:9555509:- TAF1B^ENSG00000115750.17 chr2:9882706:+ YES_LDAS 0.0034 GT 1.7465 AG 1.5656 ["INTRACHROMOSOMAL[chr2:0.29Mb]"] ACTR1B--AC139143.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACTR1B^ENSG00000115073.8 chr2:97657152:- AC139143.1^ENSG00000230080.2 chr11:1802991:- NO_LDAS 0.0034 GT 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr11]"] ACTG1P15--ENKD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACTG1P15^ENSG00000259904.1 chr15:34373934:- ENKD1^ENSG00000124074.12 chr16:67663314:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr16]"] ACTA2-AS1--CFAP221 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACTA2-AS1^ENSG00000180139.11 chr10:88935217:+ CFAP221^ENSG00000163075.13 chr2:119627694:+ YES_LDAS 0.0034 GT 1.2867 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr2]"] ACOX3--PTPRC 1 0 1.00 0.00 ONLY_REF_SPLICE ACOX3^ENSG00000087008.16 chr4:8440648:- PTPRC^ENSG00000081237.20 chr1:198692347:+ YES_LDAS 0.0034 GT 1.5329 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr1]"] ACER3--PEX7 1 0 1.00 0.00 ONLY_REF_SPLICE ACER3^ENSG00000078124.13 chr11:76861079:+ PEX7^ENSG00000112357.14 chr6:136898142:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr6]"] ACBD5--SUMF1 1 0 1.00 0.00 ONLY_REF_SPLICE ACBD5^ENSG00000107897.20 chr10:27198984:- SUMF1^ENSG00000144455.14 chr3:4376389:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr3]"] AC245036.2--LILRB1 1 0 1.00 0.00 ONLY_REF_SPLICE AC245036.2^ENSG00000235181.1 chr19:54552256:+ LILRB1^ENSG00000104972.15 chr19:54633016:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr19:0.06Mb]","NEIGHBORS[64902]"] AC244669.2--NFYC 1 0 0.25 0.00 ONLY_REF_SPLICE AC244669.2^ENSG00000274642.1 chr1:120197317:+ NFYC^ENSG00000066136.20 chr1:40738836:+ YES_LDAS 0.0008 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr1:79.43Mb]"] AC244669.1--LINC02591 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC244669.1^ENSG00000223804.5 chr1:120341717:- LINC02591^ENSG00000263590.2 chr1:143796569:+ YES_LDAS 0.0011 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr1:23.45Mb]"] AC244100.4--DYNC2I2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC244100.4^ENSG00000278690.1 chr17:36012857:+ DYNC2I2^ENSG00000119333.12 chr9:128634383:- NO_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr9]"] AC242842.2--ZADH2 1 0 1.00 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ ZADH2^ENSG00000180011.7 chr18:75202340:- YES_LDAS 0.0034 GT 1.9329 AG 1.4566 ["INTERCHROMOSOMAL[chr1--chr18]"] AC242842.2--ARFIP1 1 0 0.17 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ ARFIP1^ENSG00000164144.16 chr4:152829625:+ YES_LDAS 0.0006 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr4]"] AC233968.1--NTRK2 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC233968.1^ENSG00000274615.1 chr17:38124099:+ NTRK2^ENSG00000148053.17 chr9:84741892:+ YES_LDAS 0.0011 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr9]"] AC215522.2--AL627309.5 1 0 1.00 0.00 ONLY_REF_SPLICE AC215522.2^ENSG00000282572.2 chr7:20834:- AL627309.5^ENSG00000241860.7 chr1:173862:- YES_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] AC211486.4--FAM157B 1 0 0.33 0.00 ONLY_REF_SPLICE AC211486.4^ENSG00000275121.1 chr7:75237293:- FAM157B^ENSG00000233013.10 chr9:138243620:+ NO_LDAS 0.0011 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr9]"] AC211476.4--CCDC146 1 0 0.12 0.00 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73072670:+ CCDC146^ENSG00000135205.15 chr7:77167658:+ YES_LDAS 0.0004 GT 1.8323 AG 1.7465 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] AC142472.1--AL109618.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC142472.1^ENSG00000276728.1 chr17:45147726:- AL109618.1^ENSG00000234241.1 chr20:6215181:+ NO_LDAS 0.0034 GT 1.4295 AG 1.3996 ["INTERCHROMOSOMAL[chr17--chr20]"] AC142086.6--NRCAM 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC142086.6^ENSG00000277304.1 chr16:32919834:+ NRCAM^ENSG00000091129.21 chr7:108160492:- NO_LDAS 0.0011 GT 1.3996 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr7]"] AC138904.3--BABAM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC138904.3^ENSG00000283662.1 chr16:28259488:+ BABAM1^ENSG00000105393.16 chr19:17268822:+ YES_LDAS 0.0034 GT 1.8323 AG 1.5546 ["INTERCHROMOSOMAL[chr16--chr19]"] AC138866.1--DCP2 1 0 0.20 0.00 ONLY_REF_SPLICE AC138866.1^ENSG00000254701.3 chr5:70197255:- DCP2^ENSG00000172795.17 chr5:112985835:+ NO_LDAS 0.0007 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr5:42.77Mb]"] AC138409.2--SRRM1 1 0 0.12 0.00 ONLY_REF_SPLICE AC138409.2^ENSG00000215158.9 chr5:34175822:- SRRM1^ENSG00000133226.17 chr1:24670120:+ YES_LDAS 0.0004 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr1]"] AC138393.1--PRKAR2A 1 0 0.33 0.00 ONLY_REF_SPLICE AC138393.1^ENSG00000229930.1 chr1:224030704:- PRKAR2A^ENSG00000114302.16 chr3:48807684:- NO_LDAS 0.0011 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] AC138035.1--PCMTD2 1 0 0.08 0.00 ONLY_REF_SPLICE AC138035.1^ENSG00000238035.8 chr5:181321842:+ PCMTD2^ENSG00000203880.12 chr20:64259942:+ NO_LDAS 0.0003 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr20]"] AC136297.1--NUDT14 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC136297.1^ENSG00000287935.1 chr11:1335916:- NUDT14^ENSG00000183828.15 chr14:105181239:- NO_LDAS 0.0034 GT 1.6729 AG 1.1589 ["INTERCHROMOSOMAL[chr11--chr14]"] AC134878.2--PPIL6 1 0 1.00 0.00 ONLY_REF_SPLICE AC134878.2^ENSG00000278212.2 chrY:11212744:- PPIL6^ENSG00000185250.16 chr6:109400170:- YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chrY--chr6]"] AC134878.2--NSRP1 1 0 1.00 0.00 ONLY_REF_SPLICE AC134878.2^ENSG00000278212.2 chrY:11212744:- NSRP1^ENSG00000126653.18 chr17:30172542:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chrY--chr17]"] AC127526.1--GABRP 1 0 1.00 0.00 ONLY_REF_SPLICE AC127526.1^ENSG00000254757.1 chr11:3482982:+ GABRP^ENSG00000094755.17 chr5:170788574:+ YES_LDAS 0.0034 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr5]"] AC127502.1--VPS33A 1 0 0.25 0.00 ONLY_REF_SPLICE AC127502.1^ENSG00000215302.8 chr15:30471426:+ VPS33A^ENSG00000139719.11 chr12:122239945:- YES_LDAS 0.0008 GT 1.6895 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr12]"] AC127496.7--ZNHIT1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC127496.7^ENSG00000280351.2 chr17:81005058:+ ZNHIT1^ENSG00000106400.12 chr7:101223947:+ NO_LDAS 0.0034 GT 0.9968 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr7]"] AC116667.2--CERS4 1 0 1.00 0.00 ONLY_REF_SPLICE AC116667.2^ENSG00000284675.1 chr16:73134612:+ CERS4^ENSG00000090661.12 chr19:8254499:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr19]"] AC109811.2--ACD 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC109811.2^ENSG00000251452.2 chr4:144921116:- ACD^ENSG00000102977.17 chr16:67658249:- NO_LDAS 0.0034 GT 1.7465 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr16]"] AC108519.1--MFHAS1 1 0 0.20 0.00 INCL_NON_REF_SPLICE AC108519.1^ENSG00000288075.1 chr4:9374977:- MFHAS1^ENSG00000147324.11 chr8:8797491:- YES_LDAS 0.0007 GT 1.4566 AG 1.7968 ["INTERCHROMOSOMAL[chr4--chr8]"] AC108449.3--UGT1A12P 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC108449.3^ENSG00000259607.1 chr8:29067356:+ UGT1A12P^ENSG00000228949.1 chr2:233585602:+ YES_LDAS 0.0017 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr2]"] AC108067.1--PDLIM5 1 0 1.00 0.00 ONLY_REF_SPLICE AC108067.1^ENSG00000249951.1 chr4:94702570:+ PDLIM5^ENSG00000163110.15 chr4:94573351:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9219 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:+:[7018]"] AC107959.3--ASH2L 1 0 1.00 0.00 ONLY_REF_SPLICE AC107959.3^ENSG00000253616.5 chr8:23074436:- ASH2L^ENSG00000129691.16 chr8:38110739:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr8:15.03Mb]"] AC107067.1--NEMF 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC107067.1^ENSG00000286978.1 chr4:88359352:- NEMF^ENSG00000165525.18 chr14:49795876:- NO_LDAS 0.0034 GT 1.2729 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr14]"] AC106895.2--PRAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC106895.2^ENSG00000251216.2 chr4:173925149:- PRAP1^ENSG00000165828.15 chr10:133350113:+ NO_LDAS 0.0017 GT 1.9329 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr10]"] AC105101.1--NOLC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC105101.1^ENSG00000278891.1 chr18:48150419:- NOLC1^ENSG00000166197.17 chr10:102159452:+ YES_LDAS 0.0034 GT 1.1033 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr10]"] AC104162.1--THOC7 1 0 1.00 0.00 ONLY_REF_SPLICE AC104162.1^ENSG00000224479.6 chr3:63826824:- THOC7^ENSG00000163634.12 chr3:63839773:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:-:[6425]"] AC104117.3--ZNF454 1 0 1.00 0.00 ONLY_REF_SPLICE AC104117.3^ENSG00000254035.1 chr5:178969693:+ ZNF454^ENSG00000178187.8 chr5:178964655:+ NO_LDAS 0.0034 GT 1.6895 AG 1.9899 ["INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:+:[2957]"] AC099329.2--CFAP20DC-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE AC099329.2^ENSG00000273328.5 chr3:42819711:+ CFAP20DC-AS1^ENSG00000242428.6 chr3:58866542:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5058 ["INTRACHROMOSOMAL[chr3:15.92Mb]"] AC097500.1--FSIP2-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC097500.1^ENSG00000287129.1 chr2:185950644:- FSIP2-AS1^ENSG00000231646.6 chr2:185800148:- YES_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.15Mb]"] AC095038.1--ZNRF2 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC095038.1^ENSG00000228303.1 chr7:56649978:- ZNRF2^ENSG00000180233.11 chr7:30323642:+ NO_LDAS 0.0017 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr7:26.27Mb]"] AC093627.5--PPP1R9A 1 0 1.00 0.00 ONLY_REF_SPLICE AC093627.5^ENSG00000242474.3 chr7:148532:- PPP1R9A^ENSG00000158528.12 chr7:95111259:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr7:94.76Mb]"] AC093110.1--IMP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC093110.1^ENSG00000238018.2 chr2:54662625:- IMP4^ENSG00000136718.10 chr2:130345376:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr2:75.66Mb]"] AC092666.2--AC092681.1 1 0 0.50 0.00 ONLY_REF_SPLICE AC092666.2^ENSG00000276538.1 chr7:150047609:- AC092681.1^ENSG00000224016.2 chr7:149891301:- YES_LDAS 0.0017 GT 1.6895 AG 1.9899 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.14Mb]"] AC091939.1--STYK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC091939.1^ENSG00000254135.3 chr5:158503287:+ STYK1^ENSG00000060140.9 chr12:10620348:- NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr12]"] AC091685.2--AC017037.2 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC091685.2^ENSG00000236976.1 chr7:64141625:- AC017037.2^ENSG00000250475.1 chr4:157968513:- NO_LDAS 0.0011 GT 1.4566 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr4]"] AC091057.4--AC091057.6 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ AC091057.6^ENSG00000285035.1 chr15:30716220:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr15:0.03Mb]","LOCAL_REARRANGEMENT:+:[26911]"] AC090820.1--TAGLN2P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC090820.1^ENSG00000254316.1 chr8:30249872:- TAGLN2P1^ENSG00000253676.1 chr8:106697783:- NO_LDAS 0.0034 GT 1.5058 AG 1.7968 ["INTRACHROMOSOMAL[chr8:76.45Mb]"] AC087633.2--WDR62 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC087633.2^ENSG00000277654.6 chr15:94856356:+ WDR62^ENSG00000075702.19 chr19:36102856:+ NO_LDAS 0.0017 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr19]"] AC087500.1--AHR 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC087500.1^ENSG00000261879.7 chr17:5248000:+ AHR^ENSG00000106546.14 chr7:17322501:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr7]"] AC087359.1--ATG2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC087359.1^ENSG00000250869.2 chr8:67133745:- ATG2B^ENSG00000066739.12 chr14:96309590:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr14]"] AC087289.5--NDUFV3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC087289.5^ENSG00000267801.1 chr17:75878158:+ NDUFV3^ENSG00000160194.18 chr21:42908870:+ YES_LDAS 0.0034 GT 1.5628 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr21]"] AC087269.2--SCFD2 1 0 1.00 0.00 ONLY_REF_SPLICE AC087269.2^ENSG00000284717.1 chr8:8719411:- SCFD2^ENSG00000184178.16 chr4:52874061:- YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr4]"] AC084756.2--ZNF445 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC084756.2^ENSG00000288645.1 chr15:50657781:- ZNF445^ENSG00000185219.17 chr3:44443585:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr3]"] AC083899.1--MCOLN2 1 0 0.25 0.00 INCL_NON_REF_SPLICE AC083899.1^ENSG00000204745.4 chr2:87141005:+ MCOLN2^ENSG00000153898.13 chr1:84929640:- YES_LDAS 0.0008 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] AC073475.1--UGT8 1 0 1.00 0.00 ONLY_REF_SPLICE AC073475.1^ENSG00000250938.6 chr4:120067001:+ UGT8^ENSG00000174607.11 chr4:114622879:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9086 ["INTRACHROMOSOMAL[chr4:5.39Mb]"] AC073210.3--CDC40 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC073210.3^ENSG00000286342.1 chr7:64949798:+ CDC40^ENSG00000168438.15 chr6:110209127:+ NO_LDAS 0.0034 GT 1.6402 AG 1.3710 ["INTERCHROMOSOMAL[chr7--chr6]"] AC073210.2--AC073261.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC073210.2^ENSG00000239985.2 chr7:65038427:+ AC073261.1^ENSG00000224365.1 chr7:66004028:+ NO_LDAS 0.0034 GT 1.4716 AG 1.7465 ["INTRACHROMOSOMAL[chr7:0.97Mb]"] AC068633.1--EXOC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC068633.1^ENSG00000243276.6 chr3:118810742:- EXOC2^ENSG00000112685.14 chr6:576882:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr6]"] AC068587.6--ENPP7P4 1 0 0.09 0.00 ONLY_REF_SPLICE AC068587.6^ENSG00000284663.1 chr8:12607291:- ENPP7P4^ENSG00000241278.1 chr3:125909203:+ YES_LDAS 0.0003 GT 1.5058 AG 1.5219 ["INTERCHROMOSOMAL[chr8--chr3]"] AC068446.2--NBEAP1 1 0 1.00 0.00 ONLY_REF_SPLICE AC068446.2^ENSG00000247765.2 chr15:21324988:- NBEAP1^ENSG00000258590.5 chr15:20671268:- YES_LDAS 0.0034 GT 1.8256 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr15:0.61Mb]"] AC068044.1--PPP4R2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC068044.1^ENSG00000223691.1 chr2:22189307:+ PPP4R2^ENSG00000163605.15 chr3:73064974:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr3]"] AC063926.3--GNA13 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC063926.3^ENSG00000279905.1 chr12:130425197:+ GNA13^ENSG00000120063.10 chr17:65056395:- NO_LDAS 0.0017 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr17]"] AC061965.2--TP53I3 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC061965.2^ENSG00000259299.1 chr15:29233760:- TP53I3^ENSG00000115129.14 chr2:24083103:- NO_LDAS 0.0017 AT 1.9086 AC 1.9656 ["INTERCHROMOSOMAL[chr15--chr2]"] AC055855.1--VSIG10 1 0 1.00 0.00 ONLY_REF_SPLICE AC055855.1^ENSG00000260773.1 chr15:66331410:- VSIG10^ENSG00000176834.14 chr12:118068597:- YES_LDAS 0.0034 GT 1.7968 AG 1.6895 ["INTERCHROMOSOMAL[chr15--chr12]"] AC051619.4--SCAMP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC051619.4^ENSG00000259520.6 chr15:45253602:- SCAMP3^ENSG00000116521.11 chr1:155256791:- NO_LDAS 0.0034 GT 1.7465 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr1]"] AC048338.2--REEP3 1 0 1.00 0.00 ONLY_REF_SPLICE AC048338.2^ENSG00000284934.2 chr12:122216759:- REEP3^ENSG00000165476.14 chr10:63594778:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr10]"] AC046176.1--FMC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC046176.1^ENSG00000236814.1 chr8:56050940:- FMC1^ENSG00000164898.13 chr7:139339489:+ NO_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr7]"] AC027796.4--LIAS 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC027796.4^ENSG00000262903.1 chr17:3658076:- LIAS^ENSG00000121897.15 chr4:39465046:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr4]"] AC027682.2--LRP6 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC027682.2^ENSG00000259945.1 chr16:67542231:- LRP6^ENSG00000070018.9 chr12:12266910:- NO_LDAS 0.0017 GT 1.3753 AG 1.2419 ["INTERCHROMOSOMAL[chr16--chr12]"] AC027097.1--PGM3 1 0 1.00 0.00 ONLY_REF_SPLICE AC027097.1^ENSG00000267040.6 chr18:57642052:+ PGM3^ENSG00000013375.16 chr6:83169323:- YES_LDAS 0.0034 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr6]"] AC026412.1--AHRR 1 0 0.50 0.00 ONLY_REF_SPLICE AC026412.1^ENSG00000188002.10 chr5:1632845:- AHRR^ENSG00000063438.19 chr5:343893:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr5:1.16Mb]"] AC025449.2--WDR70 1 0 1.00 0.00 ONLY_REF_SPLICE AC025449.2^ENSG00000286193.2 chr5:37249221:+ WDR70^ENSG00000082068.9 chr5:37437922:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr5:0.13Mb]"] AC024575.1--TMEM205 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC024575.1^ENSG00000267277.1 chr19:11368174:- TMEM205^ENSG00000105518.14 chr19:11345628:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr19:0.02Mb]","NEIGHBORS[21605]"] AC024560.4--PSMB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC024560.4^ENSG00000286909.1 chr3:197649539:- PSMB1^ENSG00000008018.9 chr6:170549113:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr6]"] AC021851.1--NUP35 1 0 1.00 0.00 ONLY_REF_SPLICE AC021851.1^ENSG00000272800.3 chr2:183182680:+ NUP35^ENSG00000163002.13 chr2:183151508:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.02Mb]","LOCAL_REARRANGEMENT:+:[17126]"] AC021242.3--LEF1 1 0 0.17 0.00 INCL_NON_REF_SPLICE AC021242.3^ENSG00000272267.2 chr8:9556168:- LEF1^ENSG00000138795.10 chr4:108167748:- NO_LDAS 0.0006 GT 1.6402 AG 1.3753 ["INTERCHROMOSOMAL[chr8--chr4]"] AC021242.3--CGNL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC021242.3^ENSG00000272267.2 chr8:9556019:- CGNL1^ENSG00000128849.11 chr15:57402661:+ NO_LDAS 0.0034 GC 1.3753 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr15]"] AC021092.1--AC114878.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC021092.1^ENSG00000186019.11 chr19:44108028:- AC114878.1^ENSG00000230718.1 chr1:97774826:+ NO_LDAS 0.0011 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] AC021078.1--AL354751.1 1 0 0.20 0.00 INCL_NON_REF_SPLICE AC021078.1^ENSG00000230551.4 chr5:149496830:- AL354751.1^ENSG00000234537.1 chr9:92137375:+ NO_LDAS 0.0007 GC 1.5329 AG 1.5850 ["INTERCHROMOSOMAL[chr5--chr9]"] AC020703.1--TLR2 1 0 1.00 0.00 ONLY_REF_SPLICE AC020703.1^ENSG00000249309.1 chr4:153723294:+ TLR2^ENSG00000137462.9 chr4:153702892:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:+:[14067]"] AC020595.1--TDP2 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC020595.1^ENSG00000226681.1 chr2:181422309:- TDP2^ENSG00000111802.14 chr6:24658698:- NO_LDAS 0.0011 AT 1.8892 AC 1.8062 ["INTERCHROMOSOMAL[chr2--chr6]"] AC018638.8--C2orf16 1 0 0.20 0.00 INCL_NON_REF_SPLICE AC018638.8^ENSG00000281896.1 chr7:128617966:+ C2orf16^ENSG00000221843.4 chr2:27576327:+ NO_LDAS 0.0007 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr2]"] AC015911.9--TTC13 1 0 1.00 0.00 ONLY_REF_SPLICE AC015911.9^ENSG00000286030.2 chr17:35522279:- TTC13^ENSG00000143643.13 chr1:230961303:- YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr1]"] AC013268.1--MALL 1 0 0.25 0.00 ONLY_REF_SPLICE AC013268.1^ENSG00000186148.13 chr2:109947845:+ MALL^ENSG00000144063.4 chr2:110085757:- YES_LDAS 0.0008 GT 1.8062 AG 1.5628 ["INTRACHROMOSOMAL[chr2:0.11Mb]"] AC012414.6--BTG3 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC012414.6^ENSG00000274499.1 chr15:20803791:- BTG3^ENSG00000154640.15 chr21:17609152:- YES_LDAS 0.0011 GT 1.8295 AG 1.1589 ["INTERCHROMOSOMAL[chr15--chr21]"] AC012306.1--AMZ2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC012306.1^ENSG00000204399.3 chr2:127931433:+ AMZ2^ENSG00000196704.14 chr17:68254404:+ NO_LDAS 0.0034 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr17]"] AC011611.4--CAPN13 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC011611.4^ENSG00000257839.1 chr12:76033361:+ CAPN13^ENSG00000162949.16 chr2:30738457:- NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr2]"] AC011503.4--GMPPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC011503.4^ENSG00000287399.1 chr19:23897339:+ GMPPA^ENSG00000144591.19 chr2:219500178:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr2]"] AC011476.3--KIR2DL1 1 0 0.33 0.00 ONLY_REF_SPLICE AC011476.3^ENSG00000267265.5 chr19:55042920:+ KIR2DL1^ENSG00000125498.20 chr19:54778612:+ YES_LDAS 0.0011 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr19:0.22Mb]"] AC011450.1--SLC6A16 1 0 1.00 0.00 ONLY_REF_SPLICE AC011450.1^ENSG00000197813.6 chr19:49340172:- SLC6A16^ENSG00000063127.16 chr19:49311411:- YES_LDAS 0.0034 GT 1.5656 AG 1.9899 ["INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[6310]"] AC011450.1--SLC6A16 1 0 1.00 0.00 ONLY_REF_SPLICE AC011450.1^ENSG00000197813.6 chr19:49340172:- SLC6A16^ENSG00000063127.16 chr19:49294553:- NO_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[6310]"] AC011246.1--NIN 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC011246.1^ENSG00000286481.1 chr2:122878963:+ NIN^ENSG00000100503.26 chr14:50757444:- NO_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr14]"] AC010997.3--GPT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC010997.3^ENSG00000270087.5 chr10:75401195:- GPT2^ENSG00000166123.14 chr16:46884890:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr16]"] AC010974.2--GPR39 1 0 1.00 0.00 ONLY_REF_SPLICE AC010974.2^ENSG00000286068.1 chr2:132686465:+ GPR39^ENSG00000183840.7 chr2:132645101:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7056 ["INTRACHROMOSOMAL[chr2:0.04Mb]","LOCAL_REARRANGEMENT:+:[38642]"] AC010542.1--AC010542.5 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC010542.1^ENSG00000260650.1 chr16:66580067:- AC010542.5^ENSG00000277978.1 chr16:66565982:- YES_LDAS 0.0017 GT 1.7968 AG 1.7968 ["INTRACHROMOSOMAL[chr16:0.01Mb]","NEIGHBORS[13982]"] AC010476.2--ANXA3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC010476.2^ENSG00000287963.1 chr5:155119644:+ ANXA3^ENSG00000138772.13 chr4:78586260:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr4]"] AC009975.1--STON1-GTF2A1L 1 0 1.00 0.00 ONLY_REF_SPLICE AC009975.1^ENSG00000282890.1 chr2:48809641:+ STON1-GTF2A1L^ENSG00000068781.21 chr2:48776280:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7819 ["INTRACHROMOSOMAL[chr2:0.03Mb]","LOCAL_REARRANGEMENT:+:[32859]"] AC009927.1--CRNKL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC009927.1^ENSG00000250031.1 chr8:58425130:- CRNKL1^ENSG00000101343.15 chr20:20037340:- NO_LDAS 0.0034 GT 1.5058 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr20]"] AC009264.1--HACD4 1 0 1.00 0.00 ONLY_REF_SPLICE AC009264.1^ENSG00000234352.9 chr7:136906908:- HACD4^ENSG00000188921.14 chr9:21008146:- NO_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr9]"] AC009093.8--TTLL1 1 0 1.00 0.00 ONLY_REF_SPLICE AC009093.8^ENSG00000284649.1 chr16:29116326:+ TTLL1^ENSG00000100271.17 chr22:43075590:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr22]"] AC009093.8--AC009093.9 1 0 0.33 0.00 ONLY_REF_SPLICE AC009093.8^ENSG00000284649.1 chr16:29116326:+ AC009093.9^ENSG00000284671.1 chr16:29084443:+ YES_LDAS 0.0011 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8888]"] AC008906.2--NCBP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008906.2^ENSG00000272109.2 chr5:96803868:+ NCBP3^ENSG00000074356.17 chr17:3826104:- NO_LDAS 0.0034 GT 1.8295 AG 1.4716 ["INTERCHROMOSOMAL[chr5--chr17]"] AC008759.3--SCEL 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008759.3^ENSG00000277587.1 chr19:9721942:+ SCEL^ENSG00000136155.17 chr13:77599707:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr13]"] AC008740.2--CRYM-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC008740.2^ENSG00000276548.1 chr16:21401194:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.06Mb]","LOCAL_REARRANGEMENT:+:[62052]"] AC008571.2--CD83 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008571.2^ENSG00000286749.1 chr5:152723704:+ CD83^ENSG00000112149.10 chr6:14135951:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr5--chr6]"] AC008443.5--LINC01704 1 0 0.12 0.00 INCL_NON_REF_SPLICE AC008443.5^ENSG00000274525.1 chr5:181295562:+ LINC01704^ENSG00000231666.7 chr1:158149588:- NO_LDAS 0.0004 GT 1.5301 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr1]"] AC008403.3--PPM1B 1 0 1.00 0.00 ONLY_REF_SPLICE AC008403.3^ENSG00000287603.1 chr19:48596746:- PPM1B^ENSG00000138032.21 chr2:44209210:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr2]"] AC008395.1--AC215522.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008395.1^ENSG00000268051.1 chr19:37964289:+ AC215522.2^ENSG00000282572.2 chr7:26312:- NO_LDAS 0.0034 GC 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr7]"] AC007785.1--KIAA1958 1 0 1.00 0.00 ONLY_REF_SPLICE AC007785.1^ENSG00000267922.1 chr19:46195158:+ KIAA1958^ENSG00000165185.15 chr9:112645650:+ NO_LDAS 0.0034 GT 1.9219 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr9]"] AC007773.1--SET 1 0 1.00 0.00 ONLY_REF_SPLICE AC007773.1^ENSG00000267213.4 chr19:32399751:- SET^ENSG00000119335.17 chr9:128691170:+ YES_LDAS 0.0034 GT 1.9329 AG 1.2419 ["INTERCHROMOSOMAL[chr19--chr9]"] AC007690.1--AC087650.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC007690.1^ENSG00000233565.1 chr3:186922429:- AC087650.1^ENSG00000237888.1 chr17:43476417:+ YES_LDAS 0.0011 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr17]"] AC007614.2--AL391650.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC007614.2^ENSG00000280189.1 chr16:49297232:+ AL391650.1^ENSG00000236782.7 chr1:26170805:- NO_LDAS 0.0034 GT 1.6729 AG 1.6895 ["INTERCHROMOSOMAL[chr16--chr1]"] AC007570.1--KCTD10 1 0 1.00 0.00 ONLY_REF_SPLICE AC007570.1^ENSG00000255655.1 chr12:109447067:- KCTD10^ENSG00000110906.13 chr12:109451813:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.00Mb]","LOCAL_REARRANGEMENT:-:[1158]"] AC006299.1--PRKN 1 0 1.00 0.00 ONLY_REF_SPLICE AC006299.1^ENSG00000246225.7 chr11:22920649:+ PRKN^ENSG00000185345.23 chr6:162443473:- YES_LDAS 0.0034 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr6]"] AC006299.1--LINC02718 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC006299.1^ENSG00000246225.7 chr11:22921253:+ LINC02718^ENSG00000255418.6 chr11:23154590:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr11:0.21Mb]"] AC006059.1--TMEM33 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC006059.1^ENSG00000230084.6 chr3:42612292:- TMEM33^ENSG00000109133.13 chr4:41956443:+ YES_LDAS 0.0034 GT 1.7056 AG 0.9056 ["INTERCHROMOSOMAL[chr3--chr4]"] AC006001.2--SIMC1 1 0 1.00 0.00 ONLY_REF_SPLICE AC006001.2^ENSG00000226824.7 chr7:66667610:+ SIMC1^ENSG00000170085.18 chr5:176289654:+ YES_LDAS 0.0034 GT 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr5]"] AC005357.2--CCNYL1 1 0 1.00 0.00 ONLY_REF_SPLICE AC005357.2^ENSG00000267623.3 chr19:27970524:+ CCNYL1^ENSG00000163249.13 chr2:207724800:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr2]"] AC004923.1--ENPP7P7 1 0 0.09 0.00 INCL_NON_REF_SPLICE AC004923.1^ENSG00000254610.3 chr11:67955482:- ENPP7P7^ENSG00000273819.1 chr11:67812753:- YES_LDAS 0.0003 GT 1.4566 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.06Mb]","NEIGHBORS[61196]"] AC004812.2--CDHR4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004812.2^ENSG00000277283.1 chr12:120118521:+ CDHR4^ENSG00000187492.9 chr3:49795376:- NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr3]"] AC004706.3--RPL26P30 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004706.3^ENSG00000282936.2 chr17:6637213:- RPL26P30^ENSG00000236264.5 chr11:2335482:- NO_LDAS 0.0034 GT 1.5656 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr11]"] AC004263.2--GOLGA8VP 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004263.2^ENSG00000286067.1 chr12:120222540:+ GOLGA8VP^ENSG00000259236.1 chr15:101776202:- NO_LDAS 0.0034 GT 1.5546 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr15]"] AC002550.1--FXYD2 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC002550.1^ENSG00000261312.1 chr16:19715017:+ FXYD2^ENSG00000137731.14 chr11:117801322:- NO_LDAS 0.0017 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr11]"] AC002116.2--WDR62 1 0 1.00 0.00 ONLY_REF_SPLICE AC002116.2^ENSG00000267698.1 chr19:36019384:+ WDR62^ENSG00000075702.19 chr19:36058780:+ YES_LDAS 0.0034 GT 1.5850 AG 1.9656 ["INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[8677]"] ABHD3--RNPC3 1 0 1.00 0.00 ONLY_REF_SPLICE ABHD3^ENSG00000158201.10 chr18:21664118:- RNPC3^ENSG00000185946.16 chr1:103555034:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7232 ["INTERCHROMOSOMAL[chr18--chr1]"] ABHD16A--ANKRD11P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ABHD16A^ENSG00000204427.12 chr6:31690078:- ANKRD11P1^ENSG00000234429.1 chr2:81196252:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr2]"] ABHD14A--NPAS1 1 0 0.25 0.00 INCL_NON_REF_SPLICE ABHD14A^ENSG00000248487.9 chr3:51980577:+ NPAS1^ENSG00000130751.10 chr19:47040556:+ NO_LDAS 0.0008 GC 1.9329 AG 1.1589 ["INTERCHROMOSOMAL[chr3--chr19]"] ABCD3--MTF2 1 0 1.00 0.00 ONLY_REF_SPLICE ABCD3^ENSG00000117528.14 chr1:94418588:+ MTF2^ENSG00000143033.18 chr1:93110230:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr1:1.28Mb]"] ABCD2--CDK14 1 0 1.00 0.00 ONLY_REF_SPLICE ABCD2^ENSG00000173208.4 chr12:39573716:- CDK14^ENSG00000058091.17 chr7:90747681:+ YES_LDAS 0.0034 GT 1.8323 AG 1.5628 ["INTERCHROMOSOMAL[chr12--chr7]"] ABCC5--ZNF566 1 0 1.00 0.00 ONLY_REF_SPLICE ABCC5^ENSG00000114770.17 chr3:183987770:- ZNF566^ENSG00000186017.14 chr19:36450001:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr19]"] ABCC12--CCP110 1 0 1.00 0.00 INCL_NON_REF_SPLICE ABCC12^ENSG00000140798.16 chr16:48121681:- CCP110^ENSG00000103540.16 chr16:19536812:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr16:28.53Mb]"] ABCA9-AS1--MOB1B 1 0 1.00 0.00 ONLY_REF_SPLICE ABCA9-AS1^ENSG00000231749.3 chr17:69022467:+ MOB1B^ENSG00000173542.9 chr4:70958874:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr4]"] ABCA9--ABCA6 1 0 1.00 0.00 ONLY_REF_SPLICE ABCA9^ENSG00000154258.17 chr17:69027640:- ABCA6^ENSG00000154262.13 chr17:69089542:- YES_LDAS 0.0034 GT 1.2867 AG 1.5656 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr17:0.02Mb]","LOCAL_REARRANGEMENT:-:[17753]"] ABCA13--CFAP43 1 0 1.00 0.00 ONLY_REF_SPLICE ABCA13^ENSG00000179869.15 chr7:48528345:+ CFAP43^ENSG00000197748.13 chr10:104164300:- NO_LDAS 0.0034 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr10]"]