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Filename
tih_rna_sample_00067_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/starfusion/tih_rna_sample_00067_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.txt
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1.5 KB
Workflow Run
dev_rna_exp0002_2cae617
Published
May 16, 2026 7:01 AM

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STAR-FUSION FILTERING SUMMARY
================================================================================

Input file: tih_rna_sample_00067_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.tsv
Blacklist: blacklist_hg38_GRCh38_v2.4.0.tsv.gz
Filter config: starfusion_filter_config.yaml
Output file: tih_rna_sample_00067_23LGNLLT4_1.starfusion.starfusion.fusion_predictions.filter_summary.tsv

Total fusions: 2156
Pass (CALL=1): 1 (0.0%)
Fail (CALL=0): 2155 (100.0%)

Blacklist Flagging:
  Total blacklisted: 254
  All blacklisted fusions have CALL=0

Failure Reasons:
  Read count too low: 1 < 8: 1141
  Excluded SpliceType: INCL_NON_REF_SPLICE: 671
  Blacklisted: 126
  Blacklisted; aih_curated_blacklist score(3): 77
  aih_curated_blacklist score(3): 46
  Read count too low: 2 < 8: 38
  Excluded annotation pattern: HGNC_GENEFAM: 29
  Excluded annotation pattern: DGD_PARALOGS: 6
  Read count too low: 3 < 8: 5
  aih_curated_blacklist score(5): 3
  Read count too low: 7 < 8: 2
  Read count too low: 5 < 8: 2
  Excluded annotation pattern: GTEx_recurrent_StarF2019: 2
  Does not meet inclusion criteria: 1
  aih_curated_blacklist score(6): 1
  Read count too low: 6 < 8: 1
  Excluded annotation pattern: ConjoinG: 1
  Excluded annotation pattern: Babiceanu_Normal: 1
  Excluded annotation pattern: Greger_Normal: 1
  Blacklisted; aih_curated_blacklist score(4): 1

Breakdown by SpliceType:
  INCL_NON_REF_SPLICE: 0 pass, 1016 fail (total: 1016)
  ONLY_REF_SPLICE: 1 pass, 1139 fail (total: 1140)