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Filename
FFPE_HD835_01_RNA_0001_23LGNLLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_HD835_01_RNA_0001_23LGNLLT4_3.FusionInspector.fusions.abridged.tsv
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11.4 KB
Workflow Run
dev_rna_exp0002_2cae617
Published
May 16, 2026 7:35 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PANK2--MAVS 1446 30 1446.00 29.65 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 967 147 1.53 9.98 GT 1.5656 AG 1.5628 4.9925 1183 0
PANK2--MAVS 68 2 68.00 0.09 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 967 1494 0.07 0.05 GT 1.5656 AG 1.8323 0.2304 68 1
PANK2--MAVS 18 0 18.00 0.00 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 25106 chr20:3861332:+ ONLY_REF_SPLICE YES 967 1602 0.02 0.01 GT 1.5656 AG 1.8323 0.0609 704 0
PANK2--MAVS 6 30 6.00 0.12 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 787 147 0.05 0.25 GT 1.8256 AG 1.5628 0.0207 1866 0
PANK2--MAVS 3 29 3.00 0.06 PANK2^ENSG00000125779.23 1895 chr20:3889733:+ MAVS^ENSG00000088888.18 22753 chr20:3854564:+ INCL_NON_REF_SPLICE YES 966 195 0.03 0.17 TG 1.8062 GT 1.7056 0.0103 1178 0
PANK2--MAVS 3 28 3.00 0.06 PANK2^ENSG00000125779.23 1881 chr20:3889719:+ MAVS^ENSG00000088888.18 22739 chr20:3854550:+ INCL_NON_REF_SPLICE YES 1173 113 0.03 0.28 AG 1.6402 TT 1.6895 0.0103 1191 0
PANK2--MAVS 1 30 1.00 0.02 PANK2^ENSG00000125779.23 2094 chr20:3889932:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE NO 826 147 0.04 0.22 GT 1.6049 AG 1.5628 0.0035 1212 0
PANK2--MAVS 6 0 6.00 0.00 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 26028 chr20:3862254:+ ONLY_REF_SPLICE YES 967 3025 0.01 0.00 GT 1.5656 AG 1.8892 0.0203 1017 0
PANK2--MAVS 4 0 4.00 0.00 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 25106 chr20:3861332:+ ONLY_REF_SPLICE YES 787 1602 0.01 0.00 GT 1.8256 AG 1.8323 0.0135 1003 0
PANK2--MAVS 2 2 2.00 0.00 PANK2^ENSG00000125779.23 2094 chr20:3889932:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 826 1494 0.01 0.00 GT 1.6049 AG 1.8323 0.0068 272 0
PANK2--MAVS 2 0 2.00 0.00 PANK2^ENSG00000125779.23 1066 chr20:3888904:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 16 147 0.18 0.02 GT 1.7056 AG 1.5628 0.0068 1058 0
PANK2--MAVS 1 2 1.00 0.00 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 787 1494 0.01 0.00 GT 1.8256 AG 1.8323 0.0034 1444 0
PANK2--MAVS 1 0 1.00 0.00 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 26028 chr20:3862254:+ ONLY_REF_SPLICE YES 787 3025 0.00 0.00 GT 1.8256 AG 1.8892 0.0034 92 1
TCF7L2--AL158212.1 827 22 827.00 16.77 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 3162 0 0.27 850.00 GT 1.9219 AG 1.8892 2.8546 3386 0
TCF7L2--AL158212.1 210 11 210.00 1.85 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 30959 chr10:112905977:+ ONLY_REF_SPLICE YES 3162 12 0.07 17.08 GT 1.9219 AG 1.9899 0.7168 3331 0
TCF7L2--AL158212.1 139 24 139.00 4.86 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 2304 0 0.07 164.00 GT 1.9086 AG 1.8892 0.4867 4477 0
TCF7L2--AL158212.1 46 11 46.00 0.41 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 29852 chr10:112890966:+ ONLY_REF_SPLICE YES 3162 12 0.02 4.46 GT 1.9219 AG 1.9329 0.157 3179 0
TCF7L2--AL158212.1 12 11 12.00 0.11 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 30959 chr10:112905977:+ ONLY_REF_SPLICE YES 2304 12 0.01 1.85 GT 1.9086 AG 1.9899 0.041 3973 0
TCF7L2--AL158212.1 4 1 4.00 0.00 TCF7L2^ENSG00000148737.17 2361 chr10:112951607:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 4145 0 0.00 6.00 GT 1.2419 AG 1.8892 0.0135 1543 0
TCF7L2--AL158212.1 1 11 1.00 0.01 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 29852 chr10:112890966:+ ONLY_REF_SPLICE NO 2304 12 0.01 1.00 GT 1.9086 AG 1.9329 0.0034 4135 0
TCF7L2--AL158212.1 1 1 1.00 0.00 TCF7L2^ENSG00000148737.17 3430 chr10:112964624:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 3882 0 0.00 3.00 GT 1.9899 AG 1.8892 0.0034 2382 0
COMMD10--AP3S1 369 21 369.00 20.53 COMMD10^ENSG00000145781.9 4949 chr5:116092700:+ AP3S1^ENSG00000177879.17 23931 chr5:115895087:+ ONLY_REF_SPLICE YES 754 5204 0.52 0.08 GT 1.9329 AG 1.8256 1.3179 1674 0
COMMD10--AP3S1 10 16 10.00 0.42 COMMD10^ENSG00000145781.9 4944 chr5:116092695:+ AP3S1^ENSG00000177879.17 23931 chr5:115895087:+ ONLY_REF_SPLICE YES 774 5204 0.03 0.01 GT 1.9086 AG 1.8256 0.0352 1670 0
COMMD10--AP3S1 8 3 8.00 0.06 COMMD10^ENSG00000145781.9 4949 chr5:116092700:+ AP3S1^ENSG00000177879.17 26148 chr5:115902885:+ ONLY_REF_SPLICE YES 754 5470 0.02 0.00 GT 1.9329 AG 1.7465 0.0273 1173 0
SPAG9--MBTD1 209 3 209.00 2.77 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 59071 chr17:51201696:- ONLY_REF_SPLICE YES 1218 495 0.17 0.43 GT 1.7819 AG 1.6402 0.7165 3937 0
SPAG9--MBTD1 24 0 24.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 61818 chr17:51193016:- ONLY_REF_SPLICE YES 1218 935 0.02 0.03 GT 1.7819 AG 1.9329 0.0812 2752 0
SPAG9--MBTD1 20 0 20.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 60176 chr17:51195361:- ONLY_REF_SPLICE YES 1218 691 0.02 0.03 GT 1.7819 AG 1.9219 0.0677 3426 0
SPAG9--MBTD1 15 3 15.00 0.20 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 58690 chr17:51202077:- ONLY_REF_SPLICE YES 1218 401 0.02 0.05 GT 1.7819 AG 1.5546 0.0514 4168 0
SPAG9--MBTD1 7 0 7.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 61324 chr17:51193510:- ONLY_REF_SPLICE YES 1218 805 0.01 0.01 GT 1.7819 AG 1.8062 0.0237 3212 0
SPAG9--MBTD1 5 0 5.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 62554 chr17:51192280:- ONLY_REF_SPLICE YES 1218 1239 0.00 0.00 GT 1.7819 AG 1.6402 0.0169 2094 0
SPAG9--MBTD1 5 0 5.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 62005 chr17:51192829:- INCL_NON_REF_SPLICE YES 1218 1700 0.00 0.00 GT 1.7819 AG 1.7819 0.0169 2581 0
SPAG9--MBTD1 3 0 3.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 64251 chr17:51180694:- ONLY_REF_SPLICE YES 1218 579 0.00 0.01 GT 1.7819 AG 1.9086 0.0101 1078 0
SPAG9--MBTD1 2 3 2.00 0.03 SPAG9^ENSG00000008294.21 14323 chr17:51014232:- MBTD1^ENSG00000011258.16 54607 chr17:51209430:- ONLY_REF_SPLICE YES 851 605 0.01 0.01 GT 1.9329 AG 1.7968 0.0069 4198 0
AC005993.1--RGS6 181 4 181.00 1.60 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 9 36 18.60 5.03 GT 1.9656 AG 1.9086 0.6178 4013 0
AC005993.1--RGS6 141 10 141.00 5.01 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 36 76.00 4.11 GT 1.6402 AG 1.9086 0.4939 3057 0
AC005993.1--RGS6 94 9 94.00 2.67 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 36 34.67 2.81 GT 1.8892 AG 1.9086 0.327 1167 0
AC005993.1--RGS6 12 9 12.00 0.34 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 36 7.33 0.59 GT 1.8892 AG 1.9086 0.0418 1167 0
AC005993.1--RGS6 12 6 12.00 0.20 AC005993.1^ENSG00000266869.2 3571 chr14:71869984:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 8 36 2.11 0.51 GT 1.8062 AG 1.9086 0.0413 1819 0
AC005993.1--RGS6 3 10 3.00 0.11 AC005993.1^ENSG00000266869.2 9007 chr14:71919246:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 36 7.00 0.38 GT 1.9329 AG 1.9086 0.0105 2463 0
AC005993.1--RGS6 5 2 5.00 0.03 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 2 98 2.67 0.08 GT 1.8892 AG 1.8323 0.017 145 0
AC005993.1--RGS6 4 2 4.00 0.02 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 2 98 2.33 0.07 GT 1.8892 AG 1.8323 0.0136 142 0
AC005993.1--RGS6 4 1 4.00 0.01 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 9 98 0.60 0.06 GT 1.9656 AG 1.8323 0.0135 3754 0
AC005993.1--RGS6 2 2 2.00 0.01 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 1 98 2.50 0.05 GT 1.6402 AG 1.8323 0.0068 2045 0
GDPD5--MAP6 98 6 98.00 6.00 GDPD5^ENSG00000158555.15 12795 chr11:75477619:- MAP6^ENSG00000171533.12 38601 chr11:75608322:- ONLY_REF_SPLICE YES 527 2 0.20 35.00 GT 1.9086 AG 1.9086 0.3519 2164 0
GDPD5--MAP6 2 0 2.00 0.00 GDPD5^ENSG00000158555.15 8880 chr11:75490237:- MAP6^ENSG00000171533.12 38601 chr11:75608322:- ONLY_REF_SPLICE YES 57 2 0.05 1.00 GT 1.9086 AG 1.9086 0.0068 1498 0
ARHGAP29-AS1--NME2 58 0 58.00 0.00 ARHGAP29-AS1^ENSG00000226835.3 2423 chr1:94249519:+ NME2^ENSG00000243678.12 23405 chr17:51169937:+ ONLY_REF_SPLICE YES 0 4998 59.00 0.01 GT 1.8295 AG 1.5546 0.1962 1818 0
TLK2--AC240565.1 46 0 46.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 967 45 0.05 1.02 GT 1.8892 AG 1.8892 0.1556 1734 0
MIR4713HG--GLDN 25 3 25.00 1.81 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 0 27 29.00 1.04 GT 1.9329 AG 1.8892 0.0907 1224 0
MIR4713HG--GLDN 24 2 24.00 0.85 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 5 27 4.50 0.96 GT 1.9656 AG 1.8892 0.0841 158 0
MIR4713HG--GLDN 10 1 10.00 0.15 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 10869 chr15:51383785:+ ONLY_REF_SPLICE YES 5 56 2.00 0.21 GT 1.9656 AG 1.7056 0.0343 477 0
MIR4713HG--GLDN 3 1 3.00 0.04 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 10520 chr15:51383436:+ ONLY_REF_SPLICE YES 5 44 0.83 0.11 GT 1.9656 AG 1.9219 0.0102 826 0
MIR4713HG--GLDN 2 2 2.00 0.10 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 10520 chr15:51383436:+ ONLY_REF_SPLICE YES 0 44 5.00 0.11 GT 1.9329 AG 1.9219 0.0071 1374 0
MIR4713HG--GLDN 1 2 1.00 0.05 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 10869 chr15:51383785:+ ONLY_REF_SPLICE NO 0 56 4.00 0.07 GT 1.9329 AG 1.7056 0.0036 1197 0
MIR4713HG--GLDN 1 0 1.00 0.00 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 13637 chr15:51394835:+ ONLY_REF_SPLICE YES 0 51 2.00 0.04 GT 1.9329 AG 1.9219 0.0034 2532 0
PALLD--PPM1D 22 1 22.00 1.00 PALLD^ENSG00000129116.19 19562 chr4:168711923:+ PPM1D^ENSG00000170836.12 47789 chr17:60656599:+ ONLY_REF_SPLICE YES 59 453 0.40 0.05 GT 1.6895 AG 1.8323 0.0778 1456 0
PALLD--PPM1D 1 0 1.00 0.00 PALLD^ENSG00000129116.19 19562 chr4:168711923:+ PPM1D^ENSG00000170836.12 49233 chr17:60662995:+ ONLY_REF_SPLICE YES 59 481 0.03 0.00 GT 1.6895 AG 1.8892 0.0034 1004 0
CDKAL1--E2F3 2 0 2.00 0.00 CDKAL1^ENSG00000145996.11 4234 chr6:20548705:+ E2F3^ENSG00000112242.15 27384 chr6:20479846:+ ONLY_REF_SPLICE YES 548 397 0.01 0.01 GT 1.7968 AG 1.7819 0.0068 1652 0
58 rows