Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
8,tih_rna_sample_00341_23LGNLLT4_1,TTGGATTGTC-CGGCTGTTAG,72536779,71098532,1438247,0,0.0178,0.9802,0.0198,0.0000
8,NTC_0001_0001_23LGNLLT4_1,AATTGGCACA-CAGTCGGAGT,841557,823394,18163,0,0.0002,0.9784,0.0216,0.0000
8,tih_rna_sample_00344_23LGNLLT4_1,AGGCAATCGC-ATGAGTCTGT,52744189,51900437,843752,0,0.0130,0.9840,0.0160,0.0000
8,tih_rna_sample_00345_23LGNLLT4_1,TGCAACACTA-CGTTCTGGTA,95136890,93348963,1787927,0,0.0234,0.9812,0.0188,0.0000
8,tih_rna_sample_00347_23LGNLLT4_1,GAATCGCCTG-CATTGACGGC,109996828,107801953,2194875,0,0.0270,0.9800,0.0200,0.0000
8,tih_rna_sample_00298_23LGNLLT4_1,TCGCATGACA-TTGGCCAATG,103049907,101160557,1889350,0,0.0253,0.9817,0.0183,0.0000
8,tih_rna_sample_00348_23LGNLLT4_1,TCAATACGTG-GCTGCTAATA,108571413,106501468,2069945,0,0.0267,0.9809,0.0191,0.0000
8,tih_rna_sample_00354_23LGNLLT4_1,ATTCTCCACG-TCGATGATCG,48564754,47608815,955939,0,0.0119,0.9803,0.0197,0.0000
8,tih_rna_sample_00477_23LGNLLT4_1,TGTTACAGAG-TGTGTACCAG,127016784,123316011,3700773,0,0.0312,0.9709,0.0291,0.0000
8,tih_rna_sample_00355_23LGNLLT4_1,TTACGGACGC-ATTGGCCAGC,106491015,104460972,2030043,0,0.0262,0.9809,0.0191,0.0000
8,tih_rna_sample_00358_23LGNLLT4_1,CCAATGTTGA-CTTGAATGTC,70974863,69870613,1104250,0,0.0174,0.9844,0.0156,0.0000
8,tih_rna_sample_00303_23LGNLLT4_1,CGTACTTAGA-CCGATGTTCA,82477291,80988473,1488818,0,0.0203,0.9819,0.0181,0.0000
8,tih_rna_sample_00360_23LGNLLT4_1,GCCGTGAACA-GCACCACCAT,53775393,52669092,1106301,0,0.0132,0.9794,0.0206,0.0000
8,tih_rna_sample_00566_23LGNLLT4_1,AGGAGACCAC-TACCACGTAG,121736288,119556132,2180156,0,0.0299,0.9821,0.0179,0.0000
8,tih_rna_sample_00483_23LGNLLT4_1,GAAGCAAGCG-TCACCGACTA,75407731,73812791,1594940,0,0.0185,0.9788,0.0212,0.0000
8,tih_rna_sample_00307_23LGNLLT4_1,AACGCGACTG-GACCTACGAG,75460474,74061729,1398745,0,0.0185,0.9815,0.0185,0.0000
8,tih_rna_sample_00485_23LGNLLT4_1,TTCGCGGACT-AGAGAGTGGT,118747453,116596775,2150678,0,0.0292,0.9819,0.0181,0.0000
8,tih_rna_sample_00308_23LGNLLT4_1,TCGTGACGAC-GTGACTAACT,67678978,66534120,1144858,0,0.0166,0.9831,0.0169,0.0000
8,tih_rna_sample_00309_23LGNLLT4_1,TCAATCTAGC-TCCGAATAAG,106174993,104394560,1780433,0,0.0261,0.9832,0.0168,0.0000
8,tih_rna_sample_00487_23LGNLLT4_1,GCGGAGTCAA-CTCTATAGCT,38090970,37339884,751086,0,0.0094,0.9803,0.0197,0.0000
8,tih_rna_sample_00494_23LGNLLT4_1,GATGCTAGAA-TGGATGCCAG,56753253,55772682,980571,0,0.0139,0.9827,0.0173,0.0000
8,tih_rna_sample_00499_23LGNLLT4_1,ACGATGGTTA-AATTGCTAGG,164712362,161554565,3157797,0,0.0405,0.9808,0.0192,0.0000
8,tih_rna_sample_00500_23LGNLLT4_1,AGAGCAGTAT-CAAGAGGAGG,148768933,146036595,2732338,0,0.0366,0.9816,0.0184,0.0000
8,tih_rna_sample_00501_23LGNLLT4_1,TTGTGATCCT-ATGAAGGCAT,136688988,134476583,2212405,0,0.0336,0.9838,0.0162,0.0000
8,tih_rna_sample_00452_23LGNLLT4_1,TAAGATCGGA-TTCATCCGTG,134613177,132513178,2099999,0,0.0331,0.9844,0.0156,0.0000
8,tih_rna_sample_00505_23LGNLLT4_1,TTAGTTGCTG-ATGGCGGATT,47095198,46295174,800024,0,0.0116,0.9830,0.0170,0.0000
8,tih_rna_sample_00508_23LGNLLT4_1,AGTCAGATGC-CTCACACACT,90385701,88596552,1789149,0,0.0222,0.9802,0.0198,0.0000
8,tih_rna_sample_00312_23LGNLLT4_1,AGTACAACTG-CATTGAGTTC,103044277,101250762,1793515,0,0.0253,0.9826,0.0174,0.0000
8,tih_rna_sample_00509_23LGNLLT4_1,CTTAGTACGC-GCTACAACGA,131017506,128524063,2493443,0,0.0322,0.9810,0.0190,0.0000
8,tih_rna_sample_00510_23LGNLLT4_1,GTACGCATCG-GAGTTGTTCA,43972883,43035064,937819,0,0.0108,0.9787,0.0213,0.0000
8,tih_rna_sample_00512_23LGNLLT4_1,ACTTCCGTTC-CAATTCCGTG,115603732,113644575,1959157,0,0.0284,0.9831,0.0169,0.0000
8,FFPE_HD789_02_RNA_0011_23LGNLLT4_1,CCACCTGCTT-TGTTACCGTC,145658044,142572474,3085570,0,0.0358,0.9788,0.0212,0.0000
8,tih_rna_sample_00528_23LGNLLT4_1,TGGTGGTTGT-TACCTGTCAA,71706672,70517143,1189529,0,0.0176,0.9834,0.0166,0.0000
8,tih_rna_sample_00531_23LGNLLT4_1,ACGCAACACA-CATTCAGGAG,7562249,7401112,161137,0,0.0019,0.9787,0.0213,0.0000
8,tih_rna_sample_00535_23LGNLLT4_1,CCAGTGCACT-CCTCCGTATC,20466191,19901665,564526,0,0.0050,0.9724,0.0276,0.0000
8,tih_rna_sample_00317_23LGNLLT4_1,CATCAGGCGT-CGTGTTACCG,58505272,57276322,1228950,0,0.0144,0.9790,0.0210,0.0000
8,tih_rna_sample_00536_23LGNLLT4_1,ATCCTAGAAC-TGAAGTCTGC,6291343,6174455,116888,0,0.0015,0.9814,0.0186,0.0000
8,tih_rna_sample_00319_23LGNLLT4_1,GCCTAGAGTC-ATGGTTCTCT,121040617,119024751,2015866,0,0.0297,0.9833,0.0167,0.0000
8,tih_rna_sample_00543_23LGNLLT4_1,CTTACTCTCT-CTGCTTAAGG,35163824,34390525,773299,0,0.0086,0.9780,0.0220,0.0000
8,tih_rna_sample_00321_23LGNLLT4_1,CCGACAACCT-TTCTACCTGT,121481227,119160016,2321211,0,0.0298,0.9809,0.0191,0.0000
8,FFPE_V4_0001_RNA_0001_23LGNLLT4_1,GATCTGTATG-ATCGAAGAGC,119207171,117057756,2149415,0,0.0293,0.9820,0.0180,0.0000
8,tih_rna_sample_00322_23LGNLLT4_1,ATAGGCAGTG-CAGAACTTAG,90853167,89354683,1498484,0,0.0223,0.9835,0.0165,0.0000
8,tih_rna_sample_00323_23LGNLLT4_1,GAATAGAGTG-CACAGCGTCT,54308690,53309578,999112,0,0.0133,0.9816,0.0184,0.0000
8,tih_rna_sample_00331_23LGNLLT4_1,ATGGTTGTTG-AGTTATGAGG,84728723,83256668,1472055,0,0.0208,0.9826,0.0174,0.0000
8,tih_rna_sample_00548_23LGNLLT4_1,ACAATAGCAC-GTATGCCTAT,47233777,46386621,847156,0,0.0116,0.9821,0.0179,0.0000
8,tih_rna_sample_00332_23LGNLLT4_1,CTACAAGTTC-GCACCATGAA,27044926,26537821,507105,0,0.0066,0.9812,0.0188,0.0000
8,tih_rna_sample_00549_23LGNLLT4_1,AACCTGATCT-ATTCCGTCCG,93431972,91500332,1931640,0,0.0230,0.9793,0.0207,0.0000
8,Undetermined,,157368459,157368459,0,0,0.0387,1.0000,0.0000,0.0000