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Filename
Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L008/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:30 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
8 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 1 10953053629 10377148279 425547102052 38.85 0.95
8 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 2 10953053629 10391445584 426348047966 38.93 0.95
8 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 1 127075107 81032336 4069791551 32.03 0.64
8 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 2 127075107 105456565 4676985532 36.80 0.83
8 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 1 7964372539 7606497144 310991114271 39.05 0.96
8 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 2 7964372539 7597161019 310964695735 39.04 0.95
8 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 1 14365670390 13472626685 554809569284 38.62 0.94
8 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 2 14365670390 13622636022 559225551228 38.93 0.95
8 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 1 16609521028 15932848777 650046044869 39.14 0.96
8 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 2 16609521028 15849665753 648751652276 39.06 0.95
8 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 1 15560535957 14924672788 608783973145 39.12 0.96
8 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 2 15560535957 14850631065 607822461690 39.06 0.95
8 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 1 16394283363 15669510613 640173992800 39.05 0.96
8 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 2 16394283363 15643410908 640216114934 39.05 0.95
8 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 1 7333277854 6673876634 278593762955 37.99 0.91
8 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 2 7333277854 6859397725 283443512140 38.65 0.94
8 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 1 19179534384 18433976004 751329162153 39.17 0.96
8 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 2 19179534384 18368291276 750516281738 39.13 0.96
8 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 1 16080143265 15417145440 629523670530 39.15 0.96
8 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 2 16080143265 15278178170 626638537433 38.97 0.95
8 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 1 10717204313 10035439068 413527506528 38.59 0.94
8 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 2 10717204313 10147377492 416860876464 38.90 0.95
8 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 1 12454070941 11854712803 485086887097 38.95 0.95
8 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 2 12454070941 11901292436 486757728125 39.08 0.96
8 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 1 8120084343 7819665146 318514981958 39.23 0.96
8 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 2 8120084343 7741147202 316922151209 39.03 0.95
8 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 1 18382179488 17675404239 720602940954 39.20 0.96
8 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 2 18382179488 17589558588 718980638322 39.11 0.96
8 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 1 11386567381 10919634567 445604679021 39.13 0.96
8 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 2 11386567381 10834689711 443963965218 38.99 0.95
8 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 1 11394531574 10879804043 444765431666 39.03 0.95
8 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 2 11394531574 10887050502 445405042296 39.09 0.96
8 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 1 17930865403 17263241124 703487423985 39.23 0.96
8 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 2 17930865403 16861459731 693930827859 38.70 0.94
8 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 1 10219525678 9672659375 397373291342 38.88 0.95
8 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 2 10219525678 9701790636 398115057852 38.96 0.95
8 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 1 16032423943 15396705017 627804203852 39.16 0.96
8 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 2 16032423943 15370962522 627708402756 39.15 0.96
8 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 1 5751736470 5412289761 222688457268 38.72 0.94
8 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 2 5751736470 5426164845 223238182818 38.81 0.94
8 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 1 8569741203 8067102312 331737979956 38.71 0.94
8 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 2 8569741203 8117703155 333381970523 38.90 0.95
8 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 1 24871566662 24085258756 978601969921 39.35 0.97
8 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 2 24871566662 23910293303 975211805993 39.21 0.96
8 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 1 22464108883 21798681541 885443257150 39.42 0.97
8 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 2 22464108883 21559960642 880050010174 39.18 0.96
8 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 1 20640037188 19852813810 809283411283 39.21 0.96
8 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 2 20640037188 19696347606 806008865946 39.05 0.95
8 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 1 20326589727 19281841819 790119489826 38.87 0.95
8 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 2 20326589727 19437806199 794794155924 39.10 0.96
8 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 1 7111374898 6481289615 270306657428 38.01 0.91
8 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 2 7111374898 6684466986 275640896259 38.76 0.94
8 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 1 13648240851 13082608274 534178303505 39.14 0.96
8 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 2 13648240851 13042719802 533486058979 39.09 0.96
8 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 1 15559685827 14309318081 594406350200 38.20 0.92
8 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 2 15559685827 14623931485 602880147658 38.75 0.94
8 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 1 19783643406 19100280288 777365366802 39.29 0.97
8 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 2 19783643406 18977918264 774832821515 39.17 0.96
8 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 1 6639905333 6227312280 256581572415 38.64 0.94
8 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 2 6639905333 6302397428 258620249213 38.95 0.95
8 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 1 17456163532 16687101449 682064092610 39.07 0.96
8 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 2 17456163532 16709634089 682976862362 39.13 0.96
8 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 1 21994364644 21324647723 866217413405 39.38 0.97
8 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 2 21994364644 20953660323 857756115993 39.00 0.95
8 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 1 10827707472 10352771100 423435159420 39.11 0.96
8 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 2 10827707472 10278406266 421715671044 38.95 0.95
8 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 1 1141899599 1013966567 42836003267 37.51 0.89
8 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 2 1141899599 1060503205 44012486170 38.54 0.93
8 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 1 3090394841 2825908909 117847226140 38.13 0.91
8 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 2 3090394841 2875378044 119116963689 38.54 0.93
8 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 1 8834296072 8522711899 347083660387 39.29 0.96
8 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 2 8834296072 8400615575 344298038579 38.97 0.95
8 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 1 949992793 817650297 35165155581 37.02 0.86
8 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 2 949992793 830275569 35456832915 37.32 0.87
8 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 1 18277133167 17463727071 713608117026 39.04 0.96
8 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 2 18277133167 17491554690 714943988430 39.12 0.96
8 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 1 5309737424 4967711946 205044275409 38.62 0.94
8 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 2 5309737424 5013836011 206254904254 38.84 0.94
8 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 1 18343665277 17362869627 712718639700 38.85 0.95
8 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 2 18343665277 17404046135 714203192132 38.93 0.95
8 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 1 18000282821 17344365596 706207612544 39.23 0.96
8 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 2 18000282821 17240998673 704351073470 39.13 0.96
8 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 1 13718828217 12931373350 531545527087 38.75 0.94
8 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 2 13718828217 13011898781 534045804698 38.93 0.95
8 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 1 8200612190 7554682067 313634841170 38.25 0.92
8 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 2 8200612190 7720440065 318042505115 38.78 0.94
8 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 1 12794037173 11955988939 493186767496 38.55 0.93
8 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 2 12794037173 12099426996 497324814462 38.87 0.95
8 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 1 7132300327 6714972581 276396527246 38.75 0.94
8 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 2 7132300327 6743148606 277184404821 38.86 0.95
8 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 1 4083783826 3783442480 156795811393 38.39 0.93
8 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 2 4083783826 3811242074 157631058944 38.60 0.93
8 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 1 14108227772 13374182445 548804318610 38.90 0.95
8 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 2 14108227772 13304928812 547648427048 38.82 0.94
8 Undetermined 1 23762637309 19567591820 855501344687 36.00 0.82
8 Undetermined 2 23762637309 19158057252 842538981012 35.46 0.81
97 rows