File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Adapter_Metrics.csv
- Size
- 7.7 KB
- Workflow Run
- dev_rna_exp0002_exp0005_73d51683
- Published
- Jun 07, 2026 11:33 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 0 | 32315483575 | 0.000 |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 0 | 32315483575 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 0 | 25616509760 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 0 | 25616509760 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 0 | 19718970861 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 0 | 19718970861 | 0.000 |
| 1 | tih_rna_sample_00017_23LGNLLT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 0 | 12939180789 | 0.000 |
| 1 | tih_rna_sample_00017_23LGNLLT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 0 | 12939180789 | 0.000 |
| 1 | tih_rna_sample_00038_23LGNLLT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 0 | 7933986658 | 0.000 |
| 1 | tih_rna_sample_00038_23LGNLLT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 0 | 7933986658 | 0.000 |
| 1 | tih_rna_sample_00067_23LGNLLT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 0 | 11912874257 | 0.000 |
| 1 | tih_rna_sample_00067_23LGNLLT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 0 | 11912874257 | 0.000 |
| 1 | tih_rna_sample_00142_23LGNLLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 0 | 9538373285 | 0.000 |
| 1 | tih_rna_sample_00142_23LGNLLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 0 | 9538373285 | 0.000 |
| 1 | tih_rna_sample_00143_23LGNLLT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 0 | 9034402480 | 0.000 |
| 1 | tih_rna_sample_00143_23LGNLLT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 0 | 9034402480 | 0.000 |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_2 | TCTGACTATG | TAACCAGATC | 1 | 0 | 23136098445 | 0.000 |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_2 | TCTGACTATG | TAACCAGATC | 2 | 0 | 23136098445 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_2 | TGTGACGTAT | GCAGCGTTAG | 1 | 0 | 21175427922 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_2 | TGTGACGTAT | GCAGCGTTAG | 2 | 0 | 21175427922 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_2 | AGAAGATTGG | AGAAGGTACT | 1 | 0 | 18118504043 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_2 | AGAAGATTGG | AGAAGGTACT | 2 | 0 | 18118504043 | 0.000 |
| 1 | tih_rna_sample_00144_23LGNLLT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 0 | 15265370670 | 0.000 |
| 1 | tih_rna_sample_00144_23LGNLLT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 0 | 15265370670 | 0.000 |
| 1 | tih_rna_sample_00270_23LGNLLT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 0 | 10413718171 | 0.000 |
| 1 | tih_rna_sample_00270_23LGNLLT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 0 | 10413718171 | 0.000 |
| 1 | tih_rna_sample_00276_23LGNLLT4_1 | CACTCGCATA | GAACGCGACA | 1 | 0 | 9405931185 | 0.000 |
| 1 | tih_rna_sample_00276_23LGNLLT4_1 | CACTCGCATA | GAACGCGACA | 2 | 0 | 9405931185 | 0.000 |
| 1 | tih_rna_sample_00346_23LGNLLT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 0 | 3926407096 | 0.000 |
| 1 | tih_rna_sample_00346_23LGNLLT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 0 | 3926407096 | 0.000 |
| 1 | tih_rna_sample_00357_23LGNLLT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 0 | 13446735126 | 0.000 |
| 1 | tih_rna_sample_00357_23LGNLLT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 0 | 13446735126 | 0.000 |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_3 | TGTCAGGCTT | GATTCCTTAC | 1 | 0 | 22653862278 | 0.000 |
| 1 | FFPE_HD834_01_RNA_0001_23LGNLLT4_3 | TGTCAGGCTT | GATTCCTTAC | 2 | 0 | 22653862278 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_3 | CACGTGATGG | TACAACGTGT | 1 | 0 | 19858137444 | 0.000 |
| 1 | FFPE_HD835_01_RNA_0001_23LGNLLT4_3 | CACGTGATGG | TACAACGTGT | 2 | 0 | 19858137444 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_3 | CCATCACGTG | TCTCCTGGTT | 1 | 0 | 20201543003 | 0.000 |
| 1 | FFPE_HD789_01_RNA_0002_23LGNLLT4_3 | CCATCACGTG | TCTCCTGGTT | 2 | 0 | 20201543003 | 0.000 |
| 1 | tih_rna_sample_00401_23LGNLLT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 0 | 7585251101 | 0.000 |
| 1 | tih_rna_sample_00401_23LGNLLT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 0 | 7585251101 | 0.000 |
| 1 | tih_rna_sample_00375_23LGNLLT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 0 | 10309396046 | 0.000 |
| 1 | tih_rna_sample_00375_23LGNLLT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 0 | 10309396046 | 0.000 |
| 1 | tih_rna_sample_00423_23LGNLLT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 0 | 8597219579 | 0.000 |
| 1 | tih_rna_sample_00423_23LGNLLT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 0 | 8597219579 | 0.000 |
| 1 | tih_rna_sample_00417_23LGNLLT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 0 | 7087571862 | 0.000 |
| 1 | tih_rna_sample_00417_23LGNLLT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 0 | 7087571862 | 0.000 |
| 1 | NTC_0001_0001_23LGNLLT4_2 | GCACTACCAG | GAAGACTTAG | 1 | 0 | 24394956 | 0.000 |
| 1 | NTC_0001_0001_23LGNLLT4_2 | GCACTACCAG | GAAGACTTAG | 2 | 0 | 24394956 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 0 | 14796065992 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 0 | 14796065992 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 | AAGGTGTACT | AGCGCTACAG | 1 | 0 | 11472368601 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 | AAGGTGTACT | AGCGCTACAG | 2 | 0 | 11472368601 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 | CTTCTAACCG | TGATCAGTCT | 1 | 0 | 10039681054 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 | CTTCTAACCG | TGATCAGTCT | 2 | 0 | 10039681054 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 | TCGACCAGCA | GTTCGAACTC | 1 | 0 | 9072831678 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 | TCGACCAGCA | GTTCGAACTC | 2 | 0 | 9072831678 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 | GTGACACGTC | CTTACACTGA | 1 | 0 | 9011706123 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 | GTGACACGTC | CTTACACTGA | 2 | 0 | 9011706123 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 | AATGGACGCG | AAGTGCACCG | 1 | 0 | 9080553818 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 | AATGGACGCG | AAGTGCACCG | 2 | 0 | 9080553818 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 | TCTCCGTACT | AGTTGTGATC | 1 | 0 | 9327516734 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 | TCTCCGTACT | AGTTGTGATC | 2 | 0 | 9327516734 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 | TGGAAGCACA | TCCAACACCG | 1 | 0 | 7245278225 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 | TGGAAGCACA | TCCAACACCG | 2 | 0 | 7245278225 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 | GATAGACAAC | GTGTTCACGT | 1 | 0 | 16527372498 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 | GATAGACAAC | GTGTTCACGT | 2 | 0 | 16527372498 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 | AGCGTCTCAT | CCTAGGCGAT | 1 | 0 | 12454060069 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 | AGCGTCTCAT | CCTAGGCGAT | 2 | 0 | 12454060069 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 | CTCTATACTG | CGTTCAACCG | 1 | 0 | 10999267934 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 | CTCTATACTG | CGTTCAACCG | 2 | 0 | 10999267934 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 | ATAGCCGGTT | TCTTATCCGG | 1 | 0 | 8742276219 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 | ATAGCCGGTT | TCTTATCCGG | 2 | 0 | 8742276219 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 | GTTCTCATCA | CCTCCATTCT | 1 | 0 | 9110717729 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 | GTTCTCATCA | CCTCCATTCT | 2 | 0 | 9110717729 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 | CAATGCGTGT | ATGTTCGCGC | 1 | 0 | 9281814017 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 | CAATGCGTGT | ATGTTCGCGC | 2 | 0 | 9281814017 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 | TGAGTGTACA | ATTCGCCGGT | 1 | 0 | 9346953001 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 | TGAGTGTACA | ATTCGCCGGT | 2 | 0 | 9346953001 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 | TGCTTCCAAG | CAGATGTTAC | 1 | 0 | 7879870825 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 | TGCTTCCAAG | CAGATGTTAC | 2 | 0 | 7879870825 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 | CCTACTCTGC | TGCAATTGGC | 1 | 0 | 11863061320 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 | CCTACTCTGC | TGCAATTGGC | 2 | 0 | 11863061320 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 | TCGCTGAGAG | AATGCTCTAG | 1 | 0 | 10223473120 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 | TCGCTGAGAG | AATGCTCTAG | 2 | 0 | 10223473120 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 | CGCTAATTGC | CCATCGCATT | 1 | 0 | 10640969547 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 | CGCTAATTGC | CCATCGCATT | 2 | 0 | 10640969547 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 | TCAGCTGTCA | ACAGCTCCTG | 1 | 0 | 9410694480 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 | TCAGCTGTCA | ACAGCTCCTG | 2 | 0 | 9410694480 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 | AGACGACAGA | GAGCTGGAAT | 1 | 0 | 6168152341 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 | AGACGACAGA | GAGCTGGAAT | 2 | 0 | 6168152341 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 | TAGGTCCAGA | TGCTCATCCG | 1 | 0 | 7568523019 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 | TAGGTCCAGA | TGCTCATCCG | 2 | 0 | 7568523019 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 | TAACCTGAAC | TCAATTGACG | 1 | 0 | 8680485811 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 | TAACCTGAAC | TCAATTGACG | 2 | 0 | 8680485811 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 | GATAGGTGAA | AGACGCAAGA | 1 | 0 | 9995146171 | 0.000 |
| 1 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 | GATAGGTGAA | AGACGCAAGA | 2 | 0 | 9995146171 | 0.000 |
| 1 | Undetermined | 1 | 0 | 31913255966 | 0.000 | ||
| 1 | Undetermined | 2 | 0 | 31913255966 | 0.000 |
99 rows