File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L001/Reports/Demultiplex_Stats.csv
Size
5.7 KB
Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:33 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
1 FFPE_HD834_01_RNA_0001_23LGNLLT4_1 TAGCGAGGCT-TTGCTCACGG 214009825 209750863 4258962 0 0.0529 0.9801 0.0199 0.0000
1 FFPE_HD835_01_RNA_0001_23LGNLLT4_1 CCAACTGTAT-GCGCTAGAGA 169645760 165070926 4574834 0 0.0419 0.9730 0.0270 0.0000
1 FFPE_HD789_01_RNA_0002_23LGNLLT4_1 GAGTAGTGAC-GCGATGCCAA 130589211 127587683 3001528 0 0.0323 0.9770 0.0230 0.0000
1 tih_rna_sample_00017_23LGNLLT4_1 CCAGTATTCT-ACGAAGCGAT 85689939 83853214 1836725 0 0.0212 0.9786 0.0214 0.0000
1 tih_rna_sample_00038_23LGNLLT4_1 ATCATACCGC-ATGTCGTACT 52542958 51370029 1172929 0 0.0130 0.9777 0.0223 0.0000
1 tih_rna_sample_00067_23LGNLLT4_1 ATTCGCACTA-TCTGTATGGT 78893207 77337350 1555857 0 0.0195 0.9803 0.0197 0.0000
1 tih_rna_sample_00142_23LGNLLT4_1 CTCTTCAGCA-TTGTCTCTAC 63168035 61724842 1443193 0 0.0156 0.9772 0.0228 0.0000
1 tih_rna_sample_00143_23LGNLLT4_1 CTGTATGCCA-TTCCGGCTGT 59830480 58668381 1162099 0 0.0148 0.9806 0.0194 0.0000
1 FFPE_HD834_01_RNA_0001_23LGNLLT4_2 TCTGACTATG-TAACCAGATC 153219195 150301295 2917900 0 0.0379 0.9810 0.0190 0.0000
1 FFPE_HD835_01_RNA_0001_23LGNLLT4_2 TGTGACGTAT-GCAGCGTTAG 140234622 137309337 2925285 0 0.0347 0.9791 0.0209 0.0000
1 FFPE_HD789_01_RNA_0002_23LGNLLT4_2 AGAAGATTGG-AGAAGGTACT 119990093 117095243 2894850 0 0.0297 0.9759 0.0241 0.0000
1 tih_rna_sample_00144_23LGNLLT4_1 ATCCAGCATG-AGAGCTCTAC 101095170 98590655 2504515 0 0.0250 0.9752 0.0248 0.0000
1 tih_rna_sample_00270_23LGNLLT4_1 GCGCCATATA-GAACCTCCTA 68965021 67278220 1686801 0 0.0170 0.9755 0.0245 0.0000
1 tih_rna_sample_00276_23LGNLLT4_1 CACTCGCATA-GAACGCGACA 62290935 60842556 1448379 0 0.0154 0.9767 0.0233 0.0000
1 tih_rna_sample_00346_23LGNLLT4_1 AAGGTCAATG-GCATTATAGG 26002696 25435402 567294 0 0.0064 0.9782 0.0218 0.0000
1 tih_rna_sample_00357_23LGNLLT4_1 GTGACGCACA-CGTTGTTGCG 89051226 86880996 2170230 0 0.0220 0.9756 0.0244 0.0000
1 FFPE_HD834_01_RNA_0001_23LGNLLT4_3 TGTCAGGCTT-GATTCCTTAC 150025578 147000783 3024795 0 0.0371 0.9798 0.0202 0.0000
1 FFPE_HD835_01_RNA_0001_23LGNLLT4_3 CACGTGATGG-TACAACGTGT 131510844 128340740 3170104 0 0.0325 0.9759 0.0241 0.0000
1 FFPE_HD789_01_RNA_0002_23LGNLLT4_3 CCATCACGTG-TCTCCTGGTT 133785053 129758017 4027036 0 0.0331 0.9699 0.0301 0.0000
1 tih_rna_sample_00401_23LGNLLT4_1 ACCAGGAATT-AGCATGGCAT 50233451 48898961 1334490 0 0.0124 0.9734 0.0266 0.0000
1 tih_rna_sample_00375_23LGNLLT4_1 TAAGGCTCAC-GACGTTACTT 68274146 66748724 1525422 0 0.0169 0.9777 0.0223 0.0000
1 tih_rna_sample_00423_23LGNLLT4_1 TGGCACTGAT-GCCATAGAAT 56935229 55686143 1249086 0 0.0141 0.9781 0.0219 0.0000
1 tih_rna_sample_00417_23LGNLLT4_1 CATATGGTGC-ACAGATCTCA 46937562 45936703 1000859 0 0.0116 0.9787 0.0213 0.0000
1 NTC_0001_0001_23LGNLLT4_2 GCACTACCAG-GAAGACTTAG 161556 157065 4491 0 0.0000 0.9722 0.0278 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 GCATAAGATC-GAGAACTGGA 97987192 95406835 2580357 0 0.0242 0.9737 0.0263 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 AAGGTGTACT-AGCGCTACAG 75975951 74154854 1821097 0 0.0188 0.9760 0.0240 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 CTTCTAACCG-TGATCAGTCT 66487954 65079383 1408571 0 0.0164 0.9788 0.0212 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 TCGACCAGCA-GTTCGAACTC 60084978 58738403 1346575 0 0.0148 0.9776 0.0224 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 GTGACACGTC-CTTACACTGA 59680173 58424907 1255266 0 0.0147 0.9790 0.0210 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 AATGGACGCG-AAGTGCACCG 60136118 58462546 1673572 0 0.0149 0.9722 0.0278 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 TCTCCGTACT-AGTTGTGATC 61771634 60432803 1338831 0 0.0153 0.9783 0.0217 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 TGGAAGCACA-TCCAACACCG 47981975 46862850 1119125 0 0.0119 0.9767 0.0233 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 GATAGACAAC-GTGTTCACGT 109452798 107127858 2324940 0 0.0270 0.9788 0.0212 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 AGCGTCTCAT-CCTAGGCGAT 82477219 76488590 5988629 0 0.0204 0.9274 0.0726 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 CTCTATACTG-CGTTCAACCG 72842834 70658148 2184686 0 0.0180 0.9700 0.0300 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 ATAGCCGGTT-TCTTATCCGG 57895869 56390524 1505345 0 0.0143 0.9740 0.0260 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 GTTCTCATCA-CCTCCATTCT 60335879 59043869 1292010 0 0.0149 0.9786 0.0214 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 CAATGCGTGT-ATGTTCGCGC 61468967 59965437 1503530 0 0.0152 0.9755 0.0245 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 TGAGTGTACA-ATTCGCCGGT 61900351 60181633 1718718 0 0.0153 0.9722 0.0278 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 TGCTTCCAAG-CAGATGTTAC 52184575 51070693 1113882 0 0.0129 0.9787 0.0213 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 CCTACTCTGC-TGCAATTGGC 78563320 77083038 1480282 0 0.0194 0.9812 0.0188 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 TCGCTGAGAG-AATGCTCTAG 67705120 65746016 1959104 0 0.0167 0.9711 0.0289 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 CGCTAATTGC-CCATCGCATT 70469997 68914332 1555665 0 0.0174 0.9779 0.0221 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 TCAGCTGTCA-ACAGCTCCTG 62322480 60901739 1420741 0 0.0154 0.9772 0.0228 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 AGACGACAGA-GAGCTGGAAT 40848691 39708970 1139721 0 0.0101 0.9721 0.0279 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 TAGGTCCAGA-TGCTCATCCG 50122669 47082367 3040302 0 0.0124 0.9393 0.0607 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 TAACCTGAAC-TCAATTGACG 57486661 56305868 1180793 0 0.0142 0.9795 0.0205 0.0000
1 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 GATAGGTGAA-AGACGCAAGA 66193021 64140171 2052850 0 0.0164 0.9690 0.0310 0.0000
1 Undetermined 211346066 211346066 0 0 0.0522 1.0000 0.0000 0.0000
50 rows