File Info

Filename
Adapter_Metrics.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L002/Reports/Adapter_Metrics.csv
Size
7.7 KB
Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:35 PM

Content

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Lane Sample_ID index index2 ReadNumber AdapterBases SampleBases % Adapter Bases
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_1 TAGCGAGGCT TTGCTCACGG 1 0 32119907922 0.000
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_1 TAGCGAGGCT TTGCTCACGG 2 0 32119907922 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_1 CCAACTGTAT GCGCTAGAGA 1 0 25137099105 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_1 CCAACTGTAT GCGCTAGAGA 2 0 25137099105 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_1 GAGTAGTGAC GCGATGCCAA 1 0 19652044188 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_1 GAGTAGTGAC GCGATGCCAA 2 0 19652044188 0.000
2 tih_rna_sample_00017_23LGNLLT4_1 CCAGTATTCT ACGAAGCGAT 1 0 12787043608 0.000
2 tih_rna_sample_00017_23LGNLLT4_1 CCAGTATTCT ACGAAGCGAT 2 0 12787043608 0.000
2 tih_rna_sample_00038_23LGNLLT4_1 ATCATACCGC ATGTCGTACT 1 0 7867970666 0.000
2 tih_rna_sample_00038_23LGNLLT4_1 ATCATACCGC ATGTCGTACT 2 0 7867970666 0.000
2 tih_rna_sample_00067_23LGNLLT4_1 ATTCGCACTA TCTGTATGGT 1 0 11802475741 0.000
2 tih_rna_sample_00067_23LGNLLT4_1 ATTCGCACTA TCTGTATGGT 2 0 11802475741 0.000
2 tih_rna_sample_00142_23LGNLLT4_1 CTCTTCAGCA TTGTCTCTAC 1 0 9471286401 0.000
2 tih_rna_sample_00142_23LGNLLT4_1 CTCTTCAGCA TTGTCTCTAC 2 0 9471286401 0.000
2 tih_rna_sample_00143_23LGNLLT4_1 CTGTATGCCA TTCCGGCTGT 1 0 8900812931 0.000
2 tih_rna_sample_00143_23LGNLLT4_1 CTGTATGCCA TTCCGGCTGT 2 0 8900812931 0.000
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_2 TCTGACTATG TAACCAGATC 1 0 22748866495 0.000
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_2 TCTGACTATG TAACCAGATC 2 0 22748866495 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_2 TGTGACGTAT GCAGCGTTAG 1 0 20903770013 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_2 TGTGACGTAT GCAGCGTTAG 2 0 20903770013 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_2 AGAAGATTGG AGAAGGTACT 1 0 18094030718 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_2 AGAAGATTGG AGAAGGTACT 2 0 18094030718 0.000
2 tih_rna_sample_00144_23LGNLLT4_1 ATCCAGCATG AGAGCTCTAC 1 0 14851365363 0.000
2 tih_rna_sample_00144_23LGNLLT4_1 ATCCAGCATG AGAGCTCTAC 2 0 14851365363 0.000
2 tih_rna_sample_00270_23LGNLLT4_1 GCGCCATATA GAACCTCCTA 1 0 10337326969 0.000
2 tih_rna_sample_00270_23LGNLLT4_1 GCGCCATATA GAACCTCCTA 2 0 10337326969 0.000
2 tih_rna_sample_00276_23LGNLLT4_1 CACTCGCATA GAACGCGACA 1 0 9340622477 0.000
2 tih_rna_sample_00276_23LGNLLT4_1 CACTCGCATA GAACGCGACA 2 0 9340622477 0.000
2 tih_rna_sample_00346_23LGNLLT4_1 AAGGTCAATG GCATTATAGG 1 0 3859484953 0.000
2 tih_rna_sample_00346_23LGNLLT4_1 AAGGTCAATG GCATTATAGG 2 0 3859484953 0.000
2 tih_rna_sample_00357_23LGNLLT4_1 GTGACGCACA CGTTGTTGCG 1 0 13319152659 0.000
2 tih_rna_sample_00357_23LGNLLT4_1 GTGACGCACA CGTTGTTGCG 2 0 13319152659 0.000
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_3 TGTCAGGCTT GATTCCTTAC 1 0 22408752283 0.000
2 FFPE_HD834_01_RNA_0001_23LGNLLT4_3 TGTCAGGCTT GATTCCTTAC 2 0 22408752283 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_3 CACGTGATGG TACAACGTGT 1 0 19607502661 0.000
2 FFPE_HD835_01_RNA_0001_23LGNLLT4_3 CACGTGATGG TACAACGTGT 2 0 19607502661 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_3 CCATCACGTG TCTCCTGGTT 1 0 20100164019 0.000
2 FFPE_HD789_01_RNA_0002_23LGNLLT4_3 CCATCACGTG TCTCCTGGTT 2 0 20100164019 0.000
2 tih_rna_sample_00401_23LGNLLT4_1 ACCAGGAATT AGCATGGCAT 1 0 7423201072 0.000
2 tih_rna_sample_00401_23LGNLLT4_1 ACCAGGAATT AGCATGGCAT 2 0 7423201072 0.000
2 tih_rna_sample_00375_23LGNLLT4_1 TAAGGCTCAC GACGTTACTT 1 0 10244162234 0.000
2 tih_rna_sample_00375_23LGNLLT4_1 TAAGGCTCAC GACGTTACTT 2 0 10244162234 0.000
2 tih_rna_sample_00423_23LGNLLT4_1 TGGCACTGAT GCCATAGAAT 1 0 8521313238 0.000
2 tih_rna_sample_00423_23LGNLLT4_1 TGGCACTGAT GCCATAGAAT 2 0 8521313238 0.000
2 tih_rna_sample_00417_23LGNLLT4_1 CATATGGTGC ACAGATCTCA 1 0 6976263420 0.000
2 tih_rna_sample_00417_23LGNLLT4_1 CATATGGTGC ACAGATCTCA 2 0 6976263420 0.000
2 NTC_0001_0001_23LGNLLT4_2 GCACTACCAG GAAGACTTAG 1 0 23764833 0.000
2 NTC_0001_0001_23LGNLLT4_2 GCACTACCAG GAAGACTTAG 2 0 23764833 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 GCATAAGATC GAGAACTGGA 1 0 14777868529 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 GCATAAGATC GAGAACTGGA 2 0 14777868529 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 AAGGTGTACT AGCGCTACAG 1 0 11216782226 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 AAGGTGTACT AGCGCTACAG 2 0 11216782226 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 CTTCTAACCG TGATCAGTCT 1 0 9894707162 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 CTTCTAACCG TGATCAGTCT 2 0 9894707162 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 TCGACCAGCA GTTCGAACTC 1 0 9051703154 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 TCGACCAGCA GTTCGAACTC 2 0 9051703154 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 GTGACACGTC CTTACACTGA 1 0 8923326125 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 GTGACACGTC CTTACACTGA 2 0 8923326125 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 AATGGACGCG AAGTGCACCG 1 0 8970702224 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 AATGGACGCG AAGTGCACCG 2 0 8970702224 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 TCTCCGTACT AGTTGTGATC 1 0 9158586390 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 TCTCCGTACT AGTTGTGATC 2 0 9158586390 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 TGGAAGCACA TCCAACACCG 1 0 7194684769 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 TGGAAGCACA TCCAACACCG 2 0 7194684769 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 GATAGACAAC GTGTTCACGT 1 0 16419674013 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 GATAGACAAC GTGTTCACGT 2 0 16419674013 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 AGCGTCTCAT CCTAGGCGAT 1 0 12309444349 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 AGCGTCTCAT CCTAGGCGAT 2 0 12309444349 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 CTCTATACTG CGTTCAACCG 1 0 10791334743 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 CTCTATACTG CGTTCAACCG 2 0 10791334743 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 ATAGCCGGTT TCTTATCCGG 1 0 8603017828 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 ATAGCCGGTT TCTTATCCGG 2 0 8603017828 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 GTTCTCATCA CCTCCATTCT 1 0 9043341378 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 GTTCTCATCA CCTCCATTCT 2 0 9043341378 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 CAATGCGTGT ATGTTCGCGC 1 0 9074844357 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 CAATGCGTGT ATGTTCGCGC 2 0 9074844357 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 TGAGTGTACA ATTCGCCGGT 1 0 9182663491 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 TGAGTGTACA ATTCGCCGGT 2 0 9182663491 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 TGCTTCCAAG CAGATGTTAC 1 0 7745668518 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 TGCTTCCAAG CAGATGTTAC 2 0 7745668518 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 CCTACTCTGC TGCAATTGGC 1 0 11811353635 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 CCTACTCTGC TGCAATTGGC 2 0 11811353635 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 TCGCTGAGAG AATGCTCTAG 1 0 10075755860 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 TCGCTGAGAG AATGCTCTAG 2 0 10075755860 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 CGCTAATTGC CCATCGCATT 1 0 10520229796 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 CGCTAATTGC CCATCGCATT 2 0 10520229796 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 TCAGCTGTCA ACAGCTCCTG 1 0 9252410844 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 TCAGCTGTCA ACAGCTCCTG 2 0 9252410844 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 AGACGACAGA GAGCTGGAAT 1 0 6098785357 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 AGACGACAGA GAGCTGGAAT 2 0 6098785357 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 TAGGTCCAGA TGCTCATCCG 1 0 7499000807 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 TAGGTCCAGA TGCTCATCCG 2 0 7499000807 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 TAACCTGAAC TCAATTGACG 1 0 8594782590 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 TAACCTGAAC TCAATTGACG 2 0 8594782590 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 GATAGGTGAA AGACGCAAGA 1 0 9903540058 0.000
2 SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 GATAGGTGAA AGACGCAAGA 2 0 9903540058 0.000
2 Undetermined 1 0 32254320874 0.000
2 Undetermined 2 0 32254320874 0.000
99 rows