Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
7,tih_rna_sample_00341_23LGNLLT4_1,TTGGATTGTC-CGGCTGTTAG,73296019,71982481,1313538,0,0.0178,0.9821,0.0179,0.0000
7,NTC_0001_0001_23LGNLLT4_1,AATTGGCACA-CAGTCGGAGT,844330,827392,16938,0,0.0002,0.9799,0.0201,0.0000
7,tih_rna_sample_00344_23LGNLLT4_1,AGGCAATCGC-ATGAGTCTGT,53576575,52806025,770550,0,0.0130,0.9856,0.0144,0.0000
7,tih_rna_sample_00345_23LGNLLT4_1,TGCAACACTA-CGTTCTGGTA,95987072,94350702,1636370,0,0.0233,0.9830,0.0170,0.0000
7,tih_rna_sample_00347_23LGNLLT4_1,GAATCGCCTG-CATTGACGGC,111121467,109059885,2061582,0,0.0270,0.9814,0.0186,0.0000
7,tih_rna_sample_00298_23LGNLLT4_1,TCGCATGACA-TTGGCCAATG,104332495,102579033,1753462,0,0.0254,0.9832,0.0168,0.0000
7,tih_rna_sample_00348_23LGNLLT4_1,TCAATACGTG-GCTGCTAATA,110097225,108203704,1893521,0,0.0268,0.9828,0.0172,0.0000
7,tih_rna_sample_00354_23LGNLLT4_1,ATTCTCCACG-TCGATGATCG,48830173,47948338,881835,0,0.0119,0.9819,0.0181,0.0000
7,tih_rna_sample_00477_23LGNLLT4_1,TGTTACAGAG-TGTGTACCAG,127888661,124316946,3571715,0,0.0311,0.9721,0.0279,0.0000
7,tih_rna_sample_00355_23LGNLLT4_1,TTACGGACGC-ATTGGCCAGC,107745455,105872273,1873182,0,0.0262,0.9826,0.0174,0.0000
7,tih_rna_sample_00358_23LGNLLT4_1,CCAATGTTGA-CTTGAATGTC,71852510,70842538,1009972,0,0.0175,0.9859,0.0141,0.0000
7,tih_rna_sample_00303_23LGNLLT4_1,CGTACTTAGA-CCGATGTTCA,83180732,81814945,1365787,0,0.0202,0.9836,0.0164,0.0000
7,tih_rna_sample_00360_23LGNLLT4_1,GCCGTGAACA-GCACCACCAT,54681793,53654043,1027750,0,0.0133,0.9812,0.0188,0.0000
7,tih_rna_sample_00566_23LGNLLT4_1,AGGAGACCAC-TACCACGTAG,123567484,121562378,2005106,0,0.0301,0.9838,0.0162,0.0000
7,tih_rna_sample_00483_23LGNLLT4_1,GAAGCAAGCG-TCACCGACTA,76101471,74628576,1472895,0,0.0185,0.9806,0.0194,0.0000
7,tih_rna_sample_00307_23LGNLLT4_1,AACGCGACTG-GACCTACGAG,76140214,74871500,1268714,0,0.0185,0.9833,0.0167,0.0000
7,tih_rna_sample_00485_23LGNLLT4_1,TTCGCGGACT-AGAGAGTGGT,119536042,117571135,1964907,0,0.0291,0.9836,0.0164,0.0000
7,tih_rna_sample_00308_23LGNLLT4_1,TCGTGACGAC-GTGACTAACT,68480304,67435299,1045005,0,0.0167,0.9847,0.0153,0.0000
7,tih_rna_sample_00309_23LGNLLT4_1,TCAATCTAGC-TCCGAATAAG,107435559,105803452,1632107,0,0.0261,0.9848,0.0152,0.0000
7,tih_rna_sample_00487_23LGNLLT4_1,GCGGAGTCAA-CTCTATAGCT,38596811,37903402,693409,0,0.0094,0.9820,0.0180,0.0000
7,tih_rna_sample_00494_23LGNLLT4_1,GATGCTAGAA-TGGATGCCAG,57360127,56467826,892301,0,0.0140,0.9844,0.0156,0.0000
7,tih_rna_sample_00499_23LGNLLT4_1,ACGATGGTTA-AATTGCTAGG,166863834,163967863,2895971,0,0.0406,0.9826,0.0174,0.0000
7,tih_rna_sample_00500_23LGNLLT4_1,AGAGCAGTAT-CAAGAGGAGG,149980875,147488579,2492296,0,0.0365,0.9834,0.0166,0.0000
7,tih_rna_sample_00501_23LGNLLT4_1,TTGTGATCCT-ATGAAGGCAT,137998078,135989107,2008971,0,0.0336,0.9854,0.0146,0.0000
7,tih_rna_sample_00452_23LGNLLT4_1,TAAGATCGGA-TTCATCCGTG,136122031,134198675,1923356,0,0.0331,0.9859,0.0141,0.0000
7,tih_rna_sample_00505_23LGNLLT4_1,TTAGTTGCTG-ATGGCGGATT,47756938,47034509,722429,0,0.0116,0.9849,0.0151,0.0000
7,tih_rna_sample_00508_23LGNLLT4_1,AGTCAGATGC-CTCACACACT,91628399,89964923,1663476,0,0.0223,0.9818,0.0182,0.0000
7,tih_rna_sample_00312_23LGNLLT4_1,AGTACAACTG-CATTGAGTTC,103578013,101932896,1645117,0,0.0252,0.9841,0.0159,0.0000
7,tih_rna_sample_00509_23LGNLLT4_1,CTTAGTACGC-GCTACAACGA,132530069,130234635,2295434,0,0.0322,0.9827,0.0173,0.0000
7,tih_rna_sample_00510_23LGNLLT4_1,GTACGCATCG-GAGTTGTTCA,44256220,43390242,865978,0,0.0108,0.9804,0.0196,0.0000
7,tih_rna_sample_00512_23LGNLLT4_1,ACTTCCGTTC-CAATTCCGTG,117085530,115277751,1807779,0,0.0285,0.9846,0.0154,0.0000
7,FFPE_HD789_02_RNA_0011_23LGNLLT4_1,CCACCTGCTT-TGTTACCGTC,147311785,144422873,2888912,0,0.0358,0.9804,0.0196,0.0000
7,tih_rna_sample_00528_23LGNLLT4_1,TGGTGGTTGT-TACCTGTCAA,72198431,71125219,1073212,0,0.0176,0.9851,0.0149,0.0000
7,tih_rna_sample_00531_23LGNLLT4_1,ACGCAACACA-CATTCAGGAG,7598372,7449750,148622,0,0.0018,0.9804,0.0196,0.0000
7,tih_rna_sample_00535_23LGNLLT4_1,CCAGTGCACT-CCTCCGTATC,20606586,20085986,520600,0,0.0050,0.9747,0.0253,0.0000
7,tih_rna_sample_00317_23LGNLLT4_1,CATCAGGCGT-CGTGTTACCG,59129755,57984438,1145317,0,0.0144,0.9806,0.0194,0.0000
7,tih_rna_sample_00536_23LGNLLT4_1,ATCCTAGAAC-TGAAGTCTGC,6359011,6251593,107418,0,0.0015,0.9831,0.0169,0.0000
7,tih_rna_sample_00319_23LGNLLT4_1,GCCTAGAGTC-ATGGTTCTCT,122979922,121138516,1841406,0,0.0299,0.9850,0.0150,0.0000
7,tih_rna_sample_00543_23LGNLLT4_1,CTTACTCTCT-CTGCTTAAGG,35474633,34756361,718272,0,0.0086,0.9798,0.0202,0.0000
7,tih_rna_sample_00321_23LGNLLT4_1,CCGACAACCT-TTCTACCTGT,122642535,120474458,2168077,0,0.0298,0.9823,0.0177,0.0000
7,FFPE_V4_0001_RNA_0001_23LGNLLT4_1,GATCTGTATG-ATCGAAGAGC,120112037,118161566,1950471,0,0.0292,0.9838,0.0162,0.0000
7,tih_rna_sample_00322_23LGNLLT4_1,ATAGGCAGTG-CAGAACTTAG,91458014,90092987,1365027,0,0.0222,0.9851,0.0149,0.0000
7,tih_rna_sample_00323_23LGNLLT4_1,GAATAGAGTG-CACAGCGTCT,54780888,53868267,912621,0,0.0133,0.9833,0.0167,0.0000
7,tih_rna_sample_00331_23LGNLLT4_1,ATGGTTGTTG-AGTTATGAGG,84910985,83586316,1324669,0,0.0207,0.9844,0.0156,0.0000
7,tih_rna_sample_00548_23LGNLLT4_1,ACAATAGCAC-GTATGCCTAT,47601529,46824046,777483,0,0.0116,0.9837,0.0163,0.0000
7,tih_rna_sample_00332_23LGNLLT4_1,CTACAAGTTC-GCACCATGAA,27259741,26793011,466730,0,0.0066,0.9829,0.0171,0.0000
7,tih_rna_sample_00549_23LGNLLT4_1,AACCTGATCT-ATTCCGTCCG,94509886,92723976,1785910,0,0.0230,0.9811,0.0189,0.0000
7,Undetermined,,158180325,158180325,0,0,0.0385,1.0000,0.0000,0.0000