File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L004/Reports/Adapter_Metrics.csv
- Size
- 7.7 KB
- Workflow Run
- dev_rna_exp0002_exp0005_73d51683
- Published
- Jun 07, 2026 11:42 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_1 | TAGCGAGGCT | TTGCTCACGG | 1 | 0 | 32449876746 | 0.000 |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_1 | TAGCGAGGCT | TTGCTCACGG | 2 | 0 | 32449876746 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_1 | CCAACTGTAT | GCGCTAGAGA | 1 | 0 | 25166180648 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_1 | CCAACTGTAT | GCGCTAGAGA | 2 | 0 | 25166180648 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_1 | GAGTAGTGAC | GCGATGCCAA | 1 | 0 | 19774347846 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_1 | GAGTAGTGAC | GCGATGCCAA | 2 | 0 | 19774347846 | 0.000 |
| 4 | tih_rna_sample_00017_23LGNLLT4_1 | CCAGTATTCT | ACGAAGCGAT | 1 | 0 | 12921896121 | 0.000 |
| 4 | tih_rna_sample_00017_23LGNLLT4_1 | CCAGTATTCT | ACGAAGCGAT | 2 | 0 | 12921896121 | 0.000 |
| 4 | tih_rna_sample_00038_23LGNLLT4_1 | ATCATACCGC | ATGTCGTACT | 1 | 0 | 7904538638 | 0.000 |
| 4 | tih_rna_sample_00038_23LGNLLT4_1 | ATCATACCGC | ATGTCGTACT | 2 | 0 | 7904538638 | 0.000 |
| 4 | tih_rna_sample_00067_23LGNLLT4_1 | ATTCGCACTA | TCTGTATGGT | 1 | 0 | 11922169666 | 0.000 |
| 4 | tih_rna_sample_00067_23LGNLLT4_1 | ATTCGCACTA | TCTGTATGGT | 2 | 0 | 11922169666 | 0.000 |
| 4 | tih_rna_sample_00142_23LGNLLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 1 | 0 | 9550428219 | 0.000 |
| 4 | tih_rna_sample_00142_23LGNLLT4_1 | CTCTTCAGCA | TTGTCTCTAC | 2 | 0 | 9550428219 | 0.000 |
| 4 | tih_rna_sample_00143_23LGNLLT4_1 | CTGTATGCCA | TTCCGGCTGT | 1 | 0 | 8960358422 | 0.000 |
| 4 | tih_rna_sample_00143_23LGNLLT4_1 | CTGTATGCCA | TTCCGGCTGT | 2 | 0 | 8960358422 | 0.000 |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_2 | TCTGACTATG | TAACCAGATC | 1 | 0 | 22911694627 | 0.000 |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_2 | TCTGACTATG | TAACCAGATC | 2 | 0 | 22911694627 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_2 | TGTGACGTAT | GCAGCGTTAG | 1 | 0 | 20999832589 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_2 | TGTGACGTAT | GCAGCGTTAG | 2 | 0 | 20999832589 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_2 | AGAAGATTGG | AGAAGGTACT | 1 | 0 | 18064288248 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_2 | AGAAGATTGG | AGAAGGTACT | 2 | 0 | 18064288248 | 0.000 |
| 4 | tih_rna_sample_00144_23LGNLLT4_1 | ATCCAGCATG | AGAGCTCTAC | 1 | 0 | 15139992803 | 0.000 |
| 4 | tih_rna_sample_00144_23LGNLLT4_1 | ATCCAGCATG | AGAGCTCTAC | 2 | 0 | 15139992803 | 0.000 |
| 4 | tih_rna_sample_00270_23LGNLLT4_1 | GCGCCATATA | GAACCTCCTA | 1 | 0 | 10486779068 | 0.000 |
| 4 | tih_rna_sample_00270_23LGNLLT4_1 | GCGCCATATA | GAACCTCCTA | 2 | 0 | 10486779068 | 0.000 |
| 4 | tih_rna_sample_00276_23LGNLLT4_1 | CACTCGCATA | GAACGCGACA | 1 | 0 | 9509424320 | 0.000 |
| 4 | tih_rna_sample_00276_23LGNLLT4_1 | CACTCGCATA | GAACGCGACA | 2 | 0 | 9509424320 | 0.000 |
| 4 | tih_rna_sample_00346_23LGNLLT4_1 | AAGGTCAATG | GCATTATAGG | 1 | 0 | 3877520091 | 0.000 |
| 4 | tih_rna_sample_00346_23LGNLLT4_1 | AAGGTCAATG | GCATTATAGG | 2 | 0 | 3877520091 | 0.000 |
| 4 | tih_rna_sample_00357_23LGNLLT4_1 | GTGACGCACA | CGTTGTTGCG | 1 | 0 | 13327795748 | 0.000 |
| 4 | tih_rna_sample_00357_23LGNLLT4_1 | GTGACGCACA | CGTTGTTGCG | 2 | 0 | 13327795748 | 0.000 |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_3 | TGTCAGGCTT | GATTCCTTAC | 1 | 0 | 22638008637 | 0.000 |
| 4 | FFPE_HD834_01_RNA_0001_23LGNLLT4_3 | TGTCAGGCTT | GATTCCTTAC | 2 | 0 | 22638008637 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_3 | CACGTGATGG | TACAACGTGT | 1 | 0 | 19587634685 | 0.000 |
| 4 | FFPE_HD835_01_RNA_0001_23LGNLLT4_3 | CACGTGATGG | TACAACGTGT | 2 | 0 | 19587634685 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_3 | CCATCACGTG | TCTCCTGGTT | 1 | 0 | 20164691302 | 0.000 |
| 4 | FFPE_HD789_01_RNA_0002_23LGNLLT4_3 | CCATCACGTG | TCTCCTGGTT | 2 | 0 | 20164691302 | 0.000 |
| 4 | tih_rna_sample_00401_23LGNLLT4_1 | ACCAGGAATT | AGCATGGCAT | 1 | 0 | 7544692350 | 0.000 |
| 4 | tih_rna_sample_00401_23LGNLLT4_1 | ACCAGGAATT | AGCATGGCAT | 2 | 0 | 7544692350 | 0.000 |
| 4 | tih_rna_sample_00375_23LGNLLT4_1 | TAAGGCTCAC | GACGTTACTT | 1 | 0 | 10360483574 | 0.000 |
| 4 | tih_rna_sample_00375_23LGNLLT4_1 | TAAGGCTCAC | GACGTTACTT | 2 | 0 | 10360483574 | 0.000 |
| 4 | tih_rna_sample_00423_23LGNLLT4_1 | TGGCACTGAT | GCCATAGAAT | 1 | 0 | 8601147240 | 0.000 |
| 4 | tih_rna_sample_00423_23LGNLLT4_1 | TGGCACTGAT | GCCATAGAAT | 2 | 0 | 8601147240 | 0.000 |
| 4 | tih_rna_sample_00417_23LGNLLT4_1 | CATATGGTGC | ACAGATCTCA | 1 | 0 | 7010619695 | 0.000 |
| 4 | tih_rna_sample_00417_23LGNLLT4_1 | CATATGGTGC | ACAGATCTCA | 2 | 0 | 7010619695 | 0.000 |
| 4 | NTC_0001_0001_23LGNLLT4_2 | GCACTACCAG | GAAGACTTAG | 1 | 0 | 24044787 | 0.000 |
| 4 | NTC_0001_0001_23LGNLLT4_2 | GCACTACCAG | GAAGACTTAG | 2 | 0 | 24044787 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 | GCATAAGATC | GAGAACTGGA | 1 | 0 | 14880507608 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_1 | GCATAAGATC | GAGAACTGGA | 2 | 0 | 14880507608 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 | AAGGTGTACT | AGCGCTACAG | 1 | 0 | 11302007985 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_2 | AAGGTGTACT | AGCGCTACAG | 2 | 0 | 11302007985 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 | CTTCTAACCG | TGATCAGTCT | 1 | 0 | 9919617481 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_3 | CTTCTAACCG | TGATCAGTCT | 2 | 0 | 9919617481 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 | TCGACCAGCA | GTTCGAACTC | 1 | 0 | 9134358591 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_4 | TCGACCAGCA | GTTCGAACTC | 2 | 0 | 9134358591 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 | GTGACACGTC | CTTACACTGA | 1 | 0 | 9020941434 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_5 | GTGACACGTC | CTTACACTGA | 2 | 0 | 9020941434 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 | AATGGACGCG | AAGTGCACCG | 1 | 0 | 8988097877 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_6 | AATGGACGCG | AAGTGCACCG | 2 | 0 | 8988097877 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 | TCTCCGTACT | AGTTGTGATC | 1 | 0 | 9253341457 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_7 | TCTCCGTACT | AGTTGTGATC | 2 | 0 | 9253341457 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 | TGGAAGCACA | TCCAACACCG | 1 | 0 | 7274321565 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_8 | TGGAAGCACA | TCCAACACCG | 2 | 0 | 7274321565 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 | GATAGACAAC | GTGTTCACGT | 1 | 0 | 16588509680 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_9 | GATAGACAAC | GTGTTCACGT | 2 | 0 | 16588509680 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 | AGCGTCTCAT | CCTAGGCGAT | 1 | 0 | 12393078266 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_10 | AGCGTCTCAT | CCTAGGCGAT | 2 | 0 | 12393078266 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 | CTCTATACTG | CGTTCAACCG | 1 | 0 | 10873455338 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_11 | CTCTATACTG | CGTTCAACCG | 2 | 0 | 10873455338 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 | ATAGCCGGTT | TCTTATCCGG | 1 | 0 | 8720612702 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_12 | ATAGCCGGTT | TCTTATCCGG | 2 | 0 | 8720612702 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 | GTTCTCATCA | CCTCCATTCT | 1 | 0 | 9129347958 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13 | GTTCTCATCA | CCTCCATTCT | 2 | 0 | 9129347958 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 | CAATGCGTGT | ATGTTCGCGC | 1 | 0 | 9157338375 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_14 | CAATGCGTGT | ATGTTCGCGC | 2 | 0 | 9157338375 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 | TGAGTGTACA | ATTCGCCGGT | 1 | 0 | 9259048804 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_15 | TGAGTGTACA | ATTCGCCGGT | 2 | 0 | 9259048804 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 | TGCTTCCAAG | CAGATGTTAC | 1 | 0 | 7780187873 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_16 | TGCTTCCAAG | CAGATGTTAC | 2 | 0 | 7780187873 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 | CCTACTCTGC | TGCAATTGGC | 1 | 0 | 11893040407 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_17 | CCTACTCTGC | TGCAATTGGC | 2 | 0 | 11893040407 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 | TCGCTGAGAG | AATGCTCTAG | 1 | 0 | 10099278489 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_18 | TCGCTGAGAG | AATGCTCTAG | 2 | 0 | 10099278489 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 | CGCTAATTGC | CCATCGCATT | 1 | 0 | 10526885574 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19 | CGCTAATTGC | CCATCGCATT | 2 | 0 | 10526885574 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 | TCAGCTGTCA | ACAGCTCCTG | 1 | 0 | 9287242769 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_20 | TCAGCTGTCA | ACAGCTCCTG | 2 | 0 | 9287242769 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 | AGACGACAGA | GAGCTGGAAT | 1 | 0 | 6063176990 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_21 | AGACGACAGA | GAGCTGGAAT | 2 | 0 | 6063176990 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 | TAGGTCCAGA | TGCTCATCCG | 1 | 0 | 7560229193 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_22 | TAGGTCCAGA | TGCTCATCCG | 2 | 0 | 7560229193 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 | TAACCTGAAC | TCAATTGACG | 1 | 0 | 8695770182 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_23 | TAACCTGAAC | TCAATTGACG | 2 | 0 | 8695770182 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 | GATAGGTGAA | AGACGCAAGA | 1 | 0 | 9939416903 | 0.000 |
| 4 | SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_24 | GATAGGTGAA | AGACGCAAGA | 2 | 0 | 9939416903 | 0.000 |
| 4 | Undetermined | 1 | 0 | 29740619042 | 0.000 | ||
| 4 | Undetermined | 2 | 0 | 29740619042 | 0.000 |
99 rows