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Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:42 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
5 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 1 10889265491 10346744692 423722809363 38.91 0.95
5 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 2 10889265491 10360812447 424476298005 38.98 0.95
5 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 1 122749712 78832655 3941702324 32.11 0.64
5 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 2 122749712 99925322 4478267504 36.48 0.81
5 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 1 8032046813 7695008029 314189986678 39.12 0.96
5 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 2 8032046813 7682380518 314032375500 39.10 0.96
5 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 1 14362256884 13508685603 555470741991 38.68 0.94
5 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 2 14362256884 13663215844 559985191648 38.99 0.95
5 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 1 16487036019 15853678831 646096483858 39.19 0.96
5 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 2 16487036019 15774471756 644834617911 39.11 0.96
5 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 1 15747735187 15139394494 616835257252 39.17 0.96
5 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 2 15747735187 15070624478 615992211716 39.12 0.96
5 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 1 16443174898 15757010753 642908853815 39.10 0.96
5 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 2 16443174898 15734727388 643050280828 39.11 0.96
5 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 1 7209665630 6580424789 274227461897 38.04 0.91
5 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 2 7209665630 6765596698 279112554727 38.71 0.94
5 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 1 19223305509 18518771154 753921163713 39.22 0.96
5 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 2 19223305509 18461074561 753278842465 39.19 0.96
5 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 1 16123252557 15514738849 632482725988 39.23 0.96
5 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 2 16123252557 15366204022 629292554488 39.03 0.95
5 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 1 10679410070 10035167557 412873445188 38.66 0.94
5 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 2 10679410070 10144699166 416065444229 38.96 0.95
5 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 1 12438764222 11870217318 485057476686 39.00 0.95
5 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 2 12438764222 11921032529 486863880461 39.14 0.96
5 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 1 8283056529 7993187201 325258697594 39.27 0.97
5 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 2 8283056529 7911402067 323583320197 39.07 0.96
5 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 1 18466581089 17808694124 725105467172 39.27 0.96
5 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 2 18466581089 17717817224 723267521651 39.17 0.96
5 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 1 11381751689 10937908982 445876149275 39.17 0.96
5 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 2 11381751689 10859939149 444403437463 39.05 0.95
5 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 1 11368623900 10882070218 444340322887 39.08 0.96
5 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 2 11368623900 10891736676 444999817602 39.14 0.96
5 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 1 18007495789 17389250108 707652518477 39.30 0.97
5 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 2 18007495789 16993324265 698224315577 38.77 0.94
5 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 1 10188207221 9687898929 397178869236 38.98 0.95
5 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 2 10188207221 9701877712 397506093643 39.02 0.95
5 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 1 16189084027 15588711642 634882137372 39.22 0.96
5 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 2 16189084027 15562090345 634687533265 39.20 0.96
5 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 1 5748318132 5424635298 222852047370 38.77 0.94
5 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 2 5748318132 5438056852 223419136903 38.87 0.95
5 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 1 8530653041 8055372943 330760747552 38.77 0.94
5 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 2 8530653041 8107072315 332405796142 38.97 0.95
5 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 1 25194223009 24451343963 992418737282 39.39 0.97
5 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 2 25194223009 24276290070 989022632952 39.26 0.96
5 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 1 22403779702 21801426307 884344501990 39.47 0.97
5 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 2 22403779702 21558916897 878853979888 39.23 0.96
5 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 1 20677271372 19950400953 812115093564 39.28 0.96
5 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 2 20677271372 19784720966 808559475776 39.10 0.96
5 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 1 20322078753 19326970011 790924473546 38.92 0.95
5 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 2 20322078753 19490508043 795791474599 39.16 0.96
5 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 1 7074214402 6472541084 269445512564 38.09 0.91
5 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 2 7074214402 6671447738 274643032487 38.82 0.94
5 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 1 13697971342 13175857230 537171376167 39.22 0.96
5 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 2 13697971342 13125217480 536150926528 39.14 0.96
5 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 1 15315673451 14133267851 586131159077 38.27 0.92
5 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 2 15315673451 14446935781 594495505864 38.82 0.94
5 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 1 19994472475 19353723350 786767620112 39.35 0.97
5 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 2 19994472475 19226045680 784042537267 39.21 0.96
5 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 1 6611621221 6218607650 255853447355 38.70 0.94
5 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 2 6611621221 6294180683 257899548443 39.01 0.95
5 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 1 17546927820 16825893742 686769416809 39.14 0.96
5 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 2 17546927820 16843794698 687498583070 39.18 0.96
5 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 1 22287710079 21659305290 878870717169 39.43 0.97
5 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 2 22287710079 21290757696 870466915050 39.06 0.96
5 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 1 10610568717 10188342972 415891093419 39.20 0.96
5 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 2 10610568717 10101919919 413865502184 39.01 0.95
5 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 1 1136495460 1012227046 42685004053 37.56 0.89
5 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 2 1136495460 1057570565 43846718126 38.58 0.93
5 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 1 3042095377 2796823246 116368105690 38.25 0.92
5 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 2 3042095377 2837871030 117401930904 38.59 0.93
5 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 1 8774776855 8490964232 345304972832 39.35 0.97
5 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 2 8774776855 8365729208 342430317023 39.02 0.95
5 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 1 939019623 817899109 34980941242 37.25 0.87
5 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 2 939019623 823106062 35093329621 37.37 0.88
5 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 1 18407623441 17634319605 719677506531 39.10 0.96
5 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 2 18407623441 17662049325 720986908656 39.17 0.96
5 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 1 5276714932 4961106288 204328851057 38.72 0.94
5 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 2 5276714932 4997435560 205271069005 38.90 0.95
5 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 1 18238756668 17329957165 710192675323 38.94 0.95
5 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 2 18238756668 17355459465 711170091219 38.99 0.95
5 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 1 18110495154 17491271118 711395105922 39.28 0.97
5 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 2 18110495154 17391236366 709594603178 39.18 0.96
5 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 1 13621163078 12874925547 528447123153 38.80 0.95
5 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 2 13621163078 12959426656 531072142468 38.99 0.95
5 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 1 8071752112 7456764087 309063381582 38.29 0.92
5 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 2 8071752112 7624774985 313569032594 38.85 0.94
5 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 1 12655973796 11864928348 488684761971 38.61 0.94
5 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 2 12655973796 12006749843 492727612004 38.93 0.95
5 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 1 7127566477 6743737681 277007799133 38.86 0.95
5 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 2 7127566477 6760696457 277452909599 38.93 0.95
5 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 1 4027313601 3747458165 155006953901 38.49 0.93
5 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 2 4027313601 3769641622 155677656310 38.66 0.94
5 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 1 14044604073 13371898133 547652219945 38.99 0.95
5 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 2 14044604073 13289768331 546103356792 38.88 0.95
5 Undetermined 1 21811618404 18050537771 787820231711 36.12 0.83
5 Undetermined 2 21811618404 17839205815 779412917035 35.73 0.82
97 rows