File Info
- Filename
- Adapter_Metrics.csv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Adapter_Metrics.csv
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- 7.4 KB
- Workflow Run
- dev_rna_exp0002_exp0005_73d51683
- Published
- Jun 07, 2026 11:42 PM
Content
View in new tab| Lane | Sample_ID | index | index2 | ReadNumber | AdapterBases | SampleBases | % Adapter Bases |
| 5 | tih_rna_sample_00341_23LGNLLT4_1 | TTGGATTGTC | CGGCTGTTAG | 1 | 0 | 10889265491 | 0.000 |
| 5 | tih_rna_sample_00341_23LGNLLT4_1 | TTGGATTGTC | CGGCTGTTAG | 2 | 0 | 10889265491 | 0.000 |
| 5 | NTC_0001_0001_23LGNLLT4_1 | AATTGGCACA | CAGTCGGAGT | 1 | 0 | 122749712 | 0.000 |
| 5 | NTC_0001_0001_23LGNLLT4_1 | AATTGGCACA | CAGTCGGAGT | 2 | 0 | 122749712 | 0.000 |
| 5 | tih_rna_sample_00344_23LGNLLT4_1 | AGGCAATCGC | ATGAGTCTGT | 1 | 0 | 8032046813 | 0.000 |
| 5 | tih_rna_sample_00344_23LGNLLT4_1 | AGGCAATCGC | ATGAGTCTGT | 2 | 0 | 8032046813 | 0.000 |
| 5 | tih_rna_sample_00345_23LGNLLT4_1 | TGCAACACTA | CGTTCTGGTA | 1 | 0 | 14362256884 | 0.000 |
| 5 | tih_rna_sample_00345_23LGNLLT4_1 | TGCAACACTA | CGTTCTGGTA | 2 | 0 | 14362256884 | 0.000 |
| 5 | tih_rna_sample_00347_23LGNLLT4_1 | GAATCGCCTG | CATTGACGGC | 1 | 0 | 16487036019 | 0.000 |
| 5 | tih_rna_sample_00347_23LGNLLT4_1 | GAATCGCCTG | CATTGACGGC | 2 | 0 | 16487036019 | 0.000 |
| 5 | tih_rna_sample_00298_23LGNLLT4_1 | TCGCATGACA | TTGGCCAATG | 1 | 0 | 15747735187 | 0.000 |
| 5 | tih_rna_sample_00298_23LGNLLT4_1 | TCGCATGACA | TTGGCCAATG | 2 | 0 | 15747735187 | 0.000 |
| 5 | tih_rna_sample_00348_23LGNLLT4_1 | TCAATACGTG | GCTGCTAATA | 1 | 0 | 16443174898 | 0.000 |
| 5 | tih_rna_sample_00348_23LGNLLT4_1 | TCAATACGTG | GCTGCTAATA | 2 | 0 | 16443174898 | 0.000 |
| 5 | tih_rna_sample_00354_23LGNLLT4_1 | ATTCTCCACG | TCGATGATCG | 1 | 0 | 7209665630 | 0.000 |
| 5 | tih_rna_sample_00354_23LGNLLT4_1 | ATTCTCCACG | TCGATGATCG | 2 | 0 | 7209665630 | 0.000 |
| 5 | tih_rna_sample_00477_23LGNLLT4_1 | TGTTACAGAG | TGTGTACCAG | 1 | 0 | 19223305509 | 0.000 |
| 5 | tih_rna_sample_00477_23LGNLLT4_1 | TGTTACAGAG | TGTGTACCAG | 2 | 0 | 19223305509 | 0.000 |
| 5 | tih_rna_sample_00355_23LGNLLT4_1 | TTACGGACGC | ATTGGCCAGC | 1 | 0 | 16123252557 | 0.000 |
| 5 | tih_rna_sample_00355_23LGNLLT4_1 | TTACGGACGC | ATTGGCCAGC | 2 | 0 | 16123252557 | 0.000 |
| 5 | tih_rna_sample_00358_23LGNLLT4_1 | CCAATGTTGA | CTTGAATGTC | 1 | 0 | 10679410070 | 0.000 |
| 5 | tih_rna_sample_00358_23LGNLLT4_1 | CCAATGTTGA | CTTGAATGTC | 2 | 0 | 10679410070 | 0.000 |
| 5 | tih_rna_sample_00303_23LGNLLT4_1 | CGTACTTAGA | CCGATGTTCA | 1 | 0 | 12438764222 | 0.000 |
| 5 | tih_rna_sample_00303_23LGNLLT4_1 | CGTACTTAGA | CCGATGTTCA | 2 | 0 | 12438764222 | 0.000 |
| 5 | tih_rna_sample_00360_23LGNLLT4_1 | GCCGTGAACA | GCACCACCAT | 1 | 0 | 8283056529 | 0.000 |
| 5 | tih_rna_sample_00360_23LGNLLT4_1 | GCCGTGAACA | GCACCACCAT | 2 | 0 | 8283056529 | 0.000 |
| 5 | tih_rna_sample_00566_23LGNLLT4_1 | AGGAGACCAC | TACCACGTAG | 1 | 0 | 18466581089 | 0.000 |
| 5 | tih_rna_sample_00566_23LGNLLT4_1 | AGGAGACCAC | TACCACGTAG | 2 | 0 | 18466581089 | 0.000 |
| 5 | tih_rna_sample_00483_23LGNLLT4_1 | GAAGCAAGCG | TCACCGACTA | 1 | 0 | 11381751689 | 0.000 |
| 5 | tih_rna_sample_00483_23LGNLLT4_1 | GAAGCAAGCG | TCACCGACTA | 2 | 0 | 11381751689 | 0.000 |
| 5 | tih_rna_sample_00307_23LGNLLT4_1 | AACGCGACTG | GACCTACGAG | 1 | 0 | 11368623900 | 0.000 |
| 5 | tih_rna_sample_00307_23LGNLLT4_1 | AACGCGACTG | GACCTACGAG | 2 | 0 | 11368623900 | 0.000 |
| 5 | tih_rna_sample_00485_23LGNLLT4_1 | TTCGCGGACT | AGAGAGTGGT | 1 | 0 | 18007495789 | 0.000 |
| 5 | tih_rna_sample_00485_23LGNLLT4_1 | TTCGCGGACT | AGAGAGTGGT | 2 | 0 | 18007495789 | 0.000 |
| 5 | tih_rna_sample_00308_23LGNLLT4_1 | TCGTGACGAC | GTGACTAACT | 1 | 0 | 10188207221 | 0.000 |
| 5 | tih_rna_sample_00308_23LGNLLT4_1 | TCGTGACGAC | GTGACTAACT | 2 | 0 | 10188207221 | 0.000 |
| 5 | tih_rna_sample_00309_23LGNLLT4_1 | TCAATCTAGC | TCCGAATAAG | 1 | 0 | 16189084027 | 0.000 |
| 5 | tih_rna_sample_00309_23LGNLLT4_1 | TCAATCTAGC | TCCGAATAAG | 2 | 0 | 16189084027 | 0.000 |
| 5 | tih_rna_sample_00487_23LGNLLT4_1 | GCGGAGTCAA | CTCTATAGCT | 1 | 0 | 5748318132 | 0.000 |
| 5 | tih_rna_sample_00487_23LGNLLT4_1 | GCGGAGTCAA | CTCTATAGCT | 2 | 0 | 5748318132 | 0.000 |
| 5 | tih_rna_sample_00494_23LGNLLT4_1 | GATGCTAGAA | TGGATGCCAG | 1 | 0 | 8530653041 | 0.000 |
| 5 | tih_rna_sample_00494_23LGNLLT4_1 | GATGCTAGAA | TGGATGCCAG | 2 | 0 | 8530653041 | 0.000 |
| 5 | tih_rna_sample_00499_23LGNLLT4_1 | ACGATGGTTA | AATTGCTAGG | 1 | 0 | 25194223009 | 0.000 |
| 5 | tih_rna_sample_00499_23LGNLLT4_1 | ACGATGGTTA | AATTGCTAGG | 2 | 0 | 25194223009 | 0.000 |
| 5 | tih_rna_sample_00500_23LGNLLT4_1 | AGAGCAGTAT | CAAGAGGAGG | 1 | 0 | 22403779702 | 0.000 |
| 5 | tih_rna_sample_00500_23LGNLLT4_1 | AGAGCAGTAT | CAAGAGGAGG | 2 | 0 | 22403779702 | 0.000 |
| 5 | tih_rna_sample_00501_23LGNLLT4_1 | TTGTGATCCT | ATGAAGGCAT | 1 | 0 | 20677271372 | 0.000 |
| 5 | tih_rna_sample_00501_23LGNLLT4_1 | TTGTGATCCT | ATGAAGGCAT | 2 | 0 | 20677271372 | 0.000 |
| 5 | tih_rna_sample_00452_23LGNLLT4_1 | TAAGATCGGA | TTCATCCGTG | 1 | 0 | 20322078753 | 0.000 |
| 5 | tih_rna_sample_00452_23LGNLLT4_1 | TAAGATCGGA | TTCATCCGTG | 2 | 0 | 20322078753 | 0.000 |
| 5 | tih_rna_sample_00505_23LGNLLT4_1 | TTAGTTGCTG | ATGGCGGATT | 1 | 0 | 7074214402 | 0.000 |
| 5 | tih_rna_sample_00505_23LGNLLT4_1 | TTAGTTGCTG | ATGGCGGATT | 2 | 0 | 7074214402 | 0.000 |
| 5 | tih_rna_sample_00508_23LGNLLT4_1 | AGTCAGATGC | CTCACACACT | 1 | 0 | 13697971342 | 0.000 |
| 5 | tih_rna_sample_00508_23LGNLLT4_1 | AGTCAGATGC | CTCACACACT | 2 | 0 | 13697971342 | 0.000 |
| 5 | tih_rna_sample_00312_23LGNLLT4_1 | AGTACAACTG | CATTGAGTTC | 1 | 0 | 15315673451 | 0.000 |
| 5 | tih_rna_sample_00312_23LGNLLT4_1 | AGTACAACTG | CATTGAGTTC | 2 | 0 | 15315673451 | 0.000 |
| 5 | tih_rna_sample_00509_23LGNLLT4_1 | CTTAGTACGC | GCTACAACGA | 1 | 0 | 19994472475 | 0.000 |
| 5 | tih_rna_sample_00509_23LGNLLT4_1 | CTTAGTACGC | GCTACAACGA | 2 | 0 | 19994472475 | 0.000 |
| 5 | tih_rna_sample_00510_23LGNLLT4_1 | GTACGCATCG | GAGTTGTTCA | 1 | 0 | 6611621221 | 0.000 |
| 5 | tih_rna_sample_00510_23LGNLLT4_1 | GTACGCATCG | GAGTTGTTCA | 2 | 0 | 6611621221 | 0.000 |
| 5 | tih_rna_sample_00512_23LGNLLT4_1 | ACTTCCGTTC | CAATTCCGTG | 1 | 0 | 17546927820 | 0.000 |
| 5 | tih_rna_sample_00512_23LGNLLT4_1 | ACTTCCGTTC | CAATTCCGTG | 2 | 0 | 17546927820 | 0.000 |
| 5 | FFPE_HD789_02_RNA_0011_23LGNLLT4_1 | CCACCTGCTT | TGTTACCGTC | 1 | 0 | 22287710079 | 0.000 |
| 5 | FFPE_HD789_02_RNA_0011_23LGNLLT4_1 | CCACCTGCTT | TGTTACCGTC | 2 | 0 | 22287710079 | 0.000 |
| 5 | tih_rna_sample_00528_23LGNLLT4_1 | TGGTGGTTGT | TACCTGTCAA | 1 | 0 | 10610568717 | 0.000 |
| 5 | tih_rna_sample_00528_23LGNLLT4_1 | TGGTGGTTGT | TACCTGTCAA | 2 | 0 | 10610568717 | 0.000 |
| 5 | tih_rna_sample_00531_23LGNLLT4_1 | ACGCAACACA | CATTCAGGAG | 1 | 0 | 1136495460 | 0.000 |
| 5 | tih_rna_sample_00531_23LGNLLT4_1 | ACGCAACACA | CATTCAGGAG | 2 | 0 | 1136495460 | 0.000 |
| 5 | tih_rna_sample_00535_23LGNLLT4_1 | CCAGTGCACT | CCTCCGTATC | 1 | 0 | 3042095377 | 0.000 |
| 5 | tih_rna_sample_00535_23LGNLLT4_1 | CCAGTGCACT | CCTCCGTATC | 2 | 0 | 3042095377 | 0.000 |
| 5 | tih_rna_sample_00317_23LGNLLT4_1 | CATCAGGCGT | CGTGTTACCG | 1 | 0 | 8774776855 | 0.000 |
| 5 | tih_rna_sample_00317_23LGNLLT4_1 | CATCAGGCGT | CGTGTTACCG | 2 | 0 | 8774776855 | 0.000 |
| 5 | tih_rna_sample_00536_23LGNLLT4_1 | ATCCTAGAAC | TGAAGTCTGC | 1 | 0 | 939019623 | 0.000 |
| 5 | tih_rna_sample_00536_23LGNLLT4_1 | ATCCTAGAAC | TGAAGTCTGC | 2 | 0 | 939019623 | 0.000 |
| 5 | tih_rna_sample_00319_23LGNLLT4_1 | GCCTAGAGTC | ATGGTTCTCT | 1 | 0 | 18407623441 | 0.000 |
| 5 | tih_rna_sample_00319_23LGNLLT4_1 | GCCTAGAGTC | ATGGTTCTCT | 2 | 0 | 18407623441 | 0.000 |
| 5 | tih_rna_sample_00543_23LGNLLT4_1 | CTTACTCTCT | CTGCTTAAGG | 1 | 0 | 5276714932 | 0.000 |
| 5 | tih_rna_sample_00543_23LGNLLT4_1 | CTTACTCTCT | CTGCTTAAGG | 2 | 0 | 5276714932 | 0.000 |
| 5 | tih_rna_sample_00321_23LGNLLT4_1 | CCGACAACCT | TTCTACCTGT | 1 | 0 | 18238756668 | 0.000 |
| 5 | tih_rna_sample_00321_23LGNLLT4_1 | CCGACAACCT | TTCTACCTGT | 2 | 0 | 18238756668 | 0.000 |
| 5 | FFPE_V4_0001_RNA_0001_23LGNLLT4_1 | GATCTGTATG | ATCGAAGAGC | 1 | 0 | 18110495154 | 0.000 |
| 5 | FFPE_V4_0001_RNA_0001_23LGNLLT4_1 | GATCTGTATG | ATCGAAGAGC | 2 | 0 | 18110495154 | 0.000 |
| 5 | tih_rna_sample_00322_23LGNLLT4_1 | ATAGGCAGTG | CAGAACTTAG | 1 | 0 | 13621163078 | 0.000 |
| 5 | tih_rna_sample_00322_23LGNLLT4_1 | ATAGGCAGTG | CAGAACTTAG | 2 | 0 | 13621163078 | 0.000 |
| 5 | tih_rna_sample_00323_23LGNLLT4_1 | GAATAGAGTG | CACAGCGTCT | 1 | 0 | 8071752112 | 0.000 |
| 5 | tih_rna_sample_00323_23LGNLLT4_1 | GAATAGAGTG | CACAGCGTCT | 2 | 0 | 8071752112 | 0.000 |
| 5 | tih_rna_sample_00331_23LGNLLT4_1 | ATGGTTGTTG | AGTTATGAGG | 1 | 0 | 12655973796 | 0.000 |
| 5 | tih_rna_sample_00331_23LGNLLT4_1 | ATGGTTGTTG | AGTTATGAGG | 2 | 0 | 12655973796 | 0.000 |
| 5 | tih_rna_sample_00548_23LGNLLT4_1 | ACAATAGCAC | GTATGCCTAT | 1 | 0 | 7127566477 | 0.000 |
| 5 | tih_rna_sample_00548_23LGNLLT4_1 | ACAATAGCAC | GTATGCCTAT | 2 | 0 | 7127566477 | 0.000 |
| 5 | tih_rna_sample_00332_23LGNLLT4_1 | CTACAAGTTC | GCACCATGAA | 1 | 0 | 4027313601 | 0.000 |
| 5 | tih_rna_sample_00332_23LGNLLT4_1 | CTACAAGTTC | GCACCATGAA | 2 | 0 | 4027313601 | 0.000 |
| 5 | tih_rna_sample_00549_23LGNLLT4_1 | AACCTGATCT | ATTCCGTCCG | 1 | 0 | 14044604073 | 0.000 |
| 5 | tih_rna_sample_00549_23LGNLLT4_1 | AACCTGATCT | ATTCCGTCCG | 2 | 0 | 14044604073 | 0.000 |
| 5 | Undetermined | 1 | 0 | 21811618404 | 0.000 | ||
| 5 | Undetermined | 2 | 0 | 21811618404 | 0.000 |
97 rows