File Info

Filename
Demultiplex_Stats.csv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L005/Reports/Demultiplex_Stats.csv
Size
5.4 KB
Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:42 PM

Content

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Lane SampleID Index # Reads # Perfect Index Reads # One Mismatch Index Reads # Two Mismatch Index Reads % Reads % Perfect Index Reads % One Mismatch Index Reads % Two Mismatch Index Reads
5 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC-CGGCTGTTAG 72114341 70948941 1165400 0 0.0178 0.9838 0.0162 0.0000
5 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA-CAGTCGGAGT 812912 798395 14517 0 0.0002 0.9821 0.0179 0.0000
5 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC-ATGAGTCTGT 53192363 52520682 671681 0 0.0131 0.9874 0.0126 0.0000
5 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA-CGTTCTGGTA 95114284 93677289 1436995 0 0.0234 0.9849 0.0151 0.0000
5 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG-CATTGACGGC 109185669 107350588 1835081 0 0.0269 0.9832 0.0168 0.0000
5 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA-TTGGCCAATG 104289637 102733112 1556525 0 0.0257 0.9851 0.0149 0.0000
5 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG-GCTGCTAATA 108895198 107209327 1685871 0 0.0268 0.9845 0.0155 0.0000
5 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG-TCGATGATCG 47746130 46971373 774757 0 0.0118 0.9838 0.0162 0.0000
5 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG-TGTGTACCAG 127306659 124045348 3261311 0 0.0314 0.9744 0.0256 0.0000
5 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC-ATTGGCCAGC 106776507 105126014 1650493 0 0.0263 0.9845 0.0155 0.0000
5 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA-CTTGAATGTC 70724570 69854191 870379 0 0.0174 0.9877 0.0123 0.0000
5 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA-CCGATGTTCA 82375922 81184687 1191235 0 0.0203 0.9855 0.0145 0.0000
5 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA-GCACCACCAT 54854679 53915330 939349 0 0.0135 0.9829 0.0171 0.0000
5 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC-TACCACGTAG 122295239 120527209 1768030 0 0.0301 0.9855 0.0145 0.0000
5 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG-TCACCGACTA 75375839 74059772 1316067 0 0.0186 0.9825 0.0175 0.0000
5 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG-GACCTACGAG 75288900 74163535 1125365 0 0.0185 0.9851 0.0149 0.0000
5 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT-AGAGAGTGGT 119254939 117508412 1746527 0 0.0294 0.9854 0.0146 0.0000
5 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC-GTGACTAACT 67471571 66554662 916909 0 0.0166 0.9864 0.0136 0.0000
5 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC-TCCGAATAAG 107212477 105772219 1440258 0 0.0264 0.9866 0.0134 0.0000
5 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA-CTCTATAGCT 38068332 37454920 613412 0 0.0094 0.9839 0.0161 0.0000
5 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA-TGGATGCCAG 56494391 55712583 781808 0 0.0139 0.9862 0.0138 0.0000
5 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA-AATTGCTAGG 166849159 164263877 2585282 0 0.0411 0.9845 0.0155 0.0000
5 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT-CAAGAGGAGG 148369402 146185042 2184360 0 0.0366 0.9853 0.0147 0.0000
5 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT-ATGAAGGCAT 136935572 135174346 1761226 0 0.0337 0.9871 0.0129 0.0000
5 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA-TTCATCCGTG 134583303 132911933 1671370 0 0.0332 0.9876 0.0124 0.0000
5 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG-ATGGCGGATT 46849102 46223111 625991 0 0.0115 0.9866 0.0134 0.0000
5 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC-CTCACACACT 90715042 89241170 1473872 0 0.0223 0.9838 0.0162 0.0000
5 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG-CATTGAGTTC 101428301 100010001 1418300 0 0.0250 0.9860 0.0140 0.0000
5 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC-GCTACAACGA 132413725 130317646 2096079 0 0.0326 0.9842 0.0158 0.0000
5 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG-GAGTTGTTCA 43785571 43017267 768304 0 0.0108 0.9825 0.0175 0.0000
5 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC-CAATTCCGTG 116204820 114620686 1584134 0 0.0286 0.9864 0.0136 0.0000
5 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT-TGTTACCGTC 147600729 144953504 2647225 0 0.0364 0.9821 0.0179 0.0000
5 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT-TACCTGTCAA 70268667 69340385 928282 0 0.0173 0.9868 0.0132 0.0000
5 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA-CATTCAGGAG 7526460 7394706 131754 0 0.0019 0.9825 0.0175 0.0000
5 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT-CCTCCGTATC 20146327 19680430 465897 0 0.0050 0.9769 0.0231 0.0000
5 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT-CGTGTTACCG 58111105 57088080 1023025 0 0.0143 0.9824 0.0176 0.0000
5 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC-TGAAGTCTGC 6218673 6124375 94298 0 0.0015 0.9848 0.0152 0.0000
5 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC-ATGGTTCTCT 121904791 120294952 1609839 0 0.0300 0.9868 0.0132 0.0000
5 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT-CTGCTTAAGG 34945132 34315762 629370 0 0.0086 0.9820 0.0180 0.0000
5 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT-TTCTACCTGT 120786468 118846724 1939744 0 0.0298 0.9839 0.0161 0.0000
5 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG-ATCGAAGAGC 119937054 118209576 1727478 0 0.0295 0.9856 0.0144 0.0000
5 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG-CAGAACTTAG 90206378 89023122 1183256 0 0.0222 0.9869 0.0131 0.0000
5 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG-CACAGCGTCT 53455312 52664946 790366 0 0.0132 0.9852 0.0148 0.0000
5 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG-AGTTATGAGG 83814396 82666943 1147453 0 0.0206 0.9863 0.0137 0.0000
5 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC-GTATGCCTAT 47202427 46515133 687294 0 0.0116 0.9854 0.0146 0.0000
5 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC-GCACCATGAA 26670951 26260417 410534 0 0.0066 0.9846 0.0154 0.0000
5 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT-ATTCCGTCCG 93010623 91430475 1580148 0 0.0229 0.9830 0.0170 0.0000
5 Undetermined 144447804 144447804 0 0 0.0356 1.0000 0.0000 0.0000
49 rows