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Filename
Quality_Metrics.csv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0002_exp0005/A23LGNLLT4/nfcore_rnafusion__73d51683--20260607-225254/bclconvert/L006/Reports/Quality_Metrics.csv
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Workflow Run
dev_rna_exp0002_exp0005_73d51683
Published
Jun 07, 2026 11:49 PM

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Lane SampleID index index2 ReadNumber Yield YieldQ30 QualityScoreSum Mean Quality Score (PF) % Q30
6 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 1 10974249046 10390765781 426259167887 38.84 0.95
6 tih_rna_sample_00341_23LGNLLT4_1 TTGGATTGTC CGGCTGTTAG 2 10974249046 10397947662 426845814684 38.90 0.95
6 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 1 127692244 81392742 4088217624 32.02 0.64
6 NTC_0001_0001_23LGNLLT4_1 AATTGGCACA CAGTCGGAGT 2 127692244 103879517 4658376530 36.48 0.81
6 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 1 8039297531 7676322677 313922394782 39.05 0.95
6 tih_rna_sample_00344_23LGNLLT4_1 AGGCAATCGC ATGAGTCTGT 2 8039297531 7658818545 313659510636 39.02 0.95
6 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 1 14428121121 13523689949 557060715128 38.61 0.94
6 tih_rna_sample_00345_23LGNLLT4_1 TGCAACACTA CGTTCTGGTA 2 14428121121 13661286631 561148960501 38.89 0.95
6 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 1 16569165221 15885572904 648328307985 39.13 0.96
6 tih_rna_sample_00347_23LGNLLT4_1 GAATCGCCTG CATTGACGGC 2 16569165221 15790844251 646697410330 39.03 0.95
6 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 1 15612886600 14965437079 610648374358 39.11 0.96
6 tih_rna_sample_00298_23LGNLLT4_1 TCGCATGACA TTGGCCAATG 2 15612886600 14882856973 609455781940 39.04 0.95
6 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 1 16485718091 15747340247 643547203445 39.04 0.96
6 tih_rna_sample_00348_23LGNLLT4_1 TCAATACGTG GCTGCTAATA 2 16485718091 15711636361 643342053415 39.02 0.95
6 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 1 7340852014 6674942240 278721869384 37.97 0.91
6 tih_rna_sample_00354_23LGNLLT4_1 ATTCTCCACG TCGATGATCG 2 7340852014 6853071076 283408521919 38.61 0.93
6 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 1 19124392053 18368907442 748930596667 39.16 0.96
6 tih_rna_sample_00477_23LGNLLT4_1 TGTTACAGAG TGTGTACCAG 2 19124392053 18296384852 747909768521 39.11 0.96
6 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 1 16157477764 15491548566 632625981921 39.15 0.96
6 tih_rna_sample_00355_23LGNLLT4_1 TTACGGACGC ATTGGCCAGC 2 16157477764 15330347383 629136811510 38.94 0.95
6 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 1 10813995917 10123787153 417263934689 38.59 0.94
6 tih_rna_sample_00358_23LGNLLT4_1 CCAATGTTGA CTTGAATGTC 2 10813995917 10224535202 420259882175 38.86 0.95
6 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 1 12485036058 11876367899 486107222033 38.94 0.95
6 tih_rna_sample_00303_23LGNLLT4_1 CGTACTTAGA CCGATGTTCA 2 12485036058 11916513721 487624291963 39.06 0.95
6 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 1 8129602175 7823158921 318783959551 39.21 0.96
6 tih_rna_sample_00360_23LGNLLT4_1 GCCGTGAACA GCACCACCAT 2 8129602175 7738080920 317020509452 39.00 0.95
6 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 1 18493739496 17777525277 724950137556 39.20 0.96
6 tih_rna_sample_00566_23LGNLLT4_1 AGGAGACCAC TACCACGTAG 2 18493739496 17678221270 722928880438 39.09 0.96
6 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 1 11376321427 10901505335 445032709553 39.12 0.96
6 tih_rna_sample_00483_23LGNLLT4_1 GAAGCAAGCG TCACCGACTA 2 11376321427 10812527723 443280294134 38.97 0.95
6 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 1 11390746910 10869670122 444506350806 39.02 0.95
6 tih_rna_sample_00307_23LGNLLT4_1 AACGCGACTG GACCTACGAG 2 11390746910 10870331541 444952414308 39.06 0.95
6 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 1 17918227609 17245101036 702919994892 39.23 0.96
6 tih_rna_sample_00485_23LGNLLT4_1 TTCGCGGACT AGAGAGTGGT 2 17918227609 16832477256 693045691809 38.68 0.94
6 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 1 10291424479 9743101121 400267985936 38.89 0.95
6 tih_rna_sample_00308_23LGNLLT4_1 TCGTGACGAC GTGACTAACT 2 10291424479 9755174911 400557717973 38.92 0.95
6 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 1 16091205072 15445724535 630007591941 39.15 0.96
6 tih_rna_sample_00309_23LGNLLT4_1 TCAATCTAGC TCCGAATAAG 2 16091205072 15410609306 629624333036 39.13 0.96
6 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 1 5789770652 5444500146 224073622650 38.70 0.94
6 tih_rna_sample_00487_23LGNLLT4_1 GCGGAGTCAA CTCTATAGCT 2 5789770652 5453579056 224518695448 38.78 0.94
6 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 1 8607198414 8098556923 333122026207 38.70 0.94
6 tih_rna_sample_00494_23LGNLLT4_1 GATGCTAGAA TGGATGCCAG 2 8607198414 8142168484 334575353923 38.87 0.95
6 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 1 24897008803 24096064905 979343964555 39.34 0.97
6 tih_rna_sample_00499_23LGNLLT4_1 ACGATGGTTA AATTGCTAGG 2 24897008803 23909882878 975656694595 39.19 0.96
6 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 1 22408594488 21738423296 883156021883 39.41 0.97
6 tih_rna_sample_00500_23LGNLLT4_1 AGAGCAGTAT CAAGAGGAGG 2 22408594488 21483129884 877334426120 39.15 0.96
6 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 1 20627796222 19834384918 808730930128 39.21 0.96
6 tih_rna_sample_00501_23LGNLLT4_1 TTGTGATCCT ATGAAGGCAT 2 20627796222 19661103645 804989164638 39.02 0.95
6 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 1 20430030918 19368071393 793877102813 38.86 0.95
6 tih_rna_sample_00452_23LGNLLT4_1 TAAGATCGGA TTCATCCGTG 2 20430030918 19514581350 798312098682 39.08 0.96
6 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 1 7218536578 6576386298 274340655930 38.01 0.91
6 tih_rna_sample_00505_23LGNLLT4_1 TTAGTTGCTG ATGGCGGATT 2 7218536578 6773185080 279499598994 38.72 0.94
6 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 1 13739147532 13168997382 537791844936 39.14 0.96
6 tih_rna_sample_00508_23LGNLLT4_1 AGTCAGATGC CTCACACACT 2 13739147532 13113778484 536672850500 39.06 0.95
6 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 1 15593834175 14333922019 595593835555 38.19 0.92
6 tih_rna_sample_00312_23LGNLLT4_1 AGTACAACTG CATTGAGTTC 2 15593834175 14632740790 603616045576 38.71 0.94
6 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 1 19778858367 19087584682 777074387365 39.29 0.97
6 tih_rna_sample_00509_23LGNLLT4_1 CTTAGTACGC GCTACAACGA 2 19778858367 18952205817 774164967207 39.14 0.96
6 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 1 6644528198 6227636715 256676676432 38.63 0.94
6 tih_rna_sample_00510_23LGNLLT4_1 GTACGCATCG GAGTTGTTCA 2 6644528198 6297326056 258573976849 38.92 0.95
6 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 1 17564531098 16784233479 686214399813 39.07 0.96
6 tih_rna_sample_00512_23LGNLLT4_1 ACTTCCGTTC CAATTCCGTG 2 17564531098 16792983825 686738882088 39.10 0.96
6 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 1 21967838625 21287130604 864981007006 39.37 0.97
6 FFPE_HD789_02_RNA_0011_23LGNLLT4_1 CCACCTGCTT TGTTACCGTC 2 21967838625 20904988394 856212741779 38.98 0.95
6 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 1 10824978449 10351993406 423399942314 39.11 0.96
6 tih_rna_sample_00528_23LGNLLT4_1 TGGTGGTTGT TACCTGTCAA 2 10824978449 10263310027 421302940513 38.92 0.95
6 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 1 1147915439 1018441949 43036530476 37.49 0.89
6 tih_rna_sample_00531_23LGNLLT4_1 ACGCAACACA CATTCAGGAG 2 1147915439 1062621145 44167247173 38.48 0.93
6 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 1 3099532153 2834358020 118220050907 38.14 0.91
6 tih_rna_sample_00535_23LGNLLT4_1 CCAGTGCACT CCTCCGTATC 2 3099532153 2877018634 119305091434 38.49 0.93
6 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 1 8826989635 8513062486 346768402162 39.29 0.96
6 tih_rna_sample_00317_23LGNLLT4_1 CATCAGGCGT CGTGTTACCG 2 8826989635 8383095977 343771025381 38.95 0.95
6 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 1 963143232 830584280 35692327100 37.06 0.86
6 tih_rna_sample_00536_23LGNLLT4_1 ATCCTAGAAC TGAAGTCTGC 2 963143232 837792347 35853369269 37.23 0.87
6 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 1 18421963156 17591874637 719073433537 39.03 0.95
6 tih_rna_sample_00319_23LGNLLT4_1 GCCTAGAGTC ATGGTTCTCT 2 18421963156 17608940694 720114232101 39.09 0.96
6 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 1 5342903970 4999626825 206371232757 38.63 0.94
6 tih_rna_sample_00543_23LGNLLT4_1 CTTACTCTCT CTGCTTAAGG 2 5342903970 5036772130 207339986404 38.81 0.94
6 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 1 18412790359 17427269202 715482903177 38.86 0.95
6 tih_rna_sample_00321_23LGNLLT4_1 CCGACAACCT TTCTACCTGT 2 18412790359 17445824279 716330997467 38.90 0.95
6 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 1 17914655855 17250633547 702638225410 39.22 0.96
6 FFPE_V4_0001_RNA_0001_23LGNLLT4_1 GATCTGTATG ATCGAAGAGC 2 17914655855 17140342096 700573326868 39.11 0.96
6 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 1 13715421506 12919156100 531202944593 38.73 0.94
6 tih_rna_sample_00322_23LGNLLT4_1 ATAGGCAGTG CAGAACTTAG 2 13715421506 12991717899 533509787577 38.90 0.95
6 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 1 8245564890 7589983839 315184786905 38.22 0.92
6 tih_rna_sample_00323_23LGNLLT4_1 GAATAGAGTG CACAGCGTCT 2 8245564890 7750835983 319492007635 38.75 0.94
6 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 1 12779420675 11936278771 492515037514 38.54 0.93
6 tih_rna_sample_00331_23LGNLLT4_1 ATGGTTGTTG AGTTATGAGG 2 12779420675 12067415873 496306730765 38.84 0.94
6 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 1 7170024657 6754198968 277996006914 38.77 0.94
6 tih_rna_sample_00548_23LGNLLT4_1 ACAATAGCAC GTATGCCTAT 2 7170024657 6768908334 278404609458 38.83 0.94
6 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 1 4094963715 3793239858 157233520917 38.40 0.93
6 tih_rna_sample_00332_23LGNLLT4_1 CTACAAGTTC GCACCATGAA 2 4094963715 3813534907 157869558919 38.55 0.93
6 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 1 14234831457 13495665636 553824555825 38.91 0.95
6 tih_rna_sample_00549_23LGNLLT4_1 AACCTGATCT ATTCCGTCCG 2 14234831457 13405897409 552114431159 38.79 0.94
6 Undetermined 1 23051453281 18950087900 829665087980 35.99 0.82
6 Undetermined 2 23051453281 18644367479 818725508405 35.52 0.81
97 rows