Lane,SampleID,Index,# Reads,# Perfect Index Reads,# One Mismatch Index Reads,# Two Mismatch Index Reads,% Reads,% Perfect Index Reads,% One Mismatch Index Reads,% Two Mismatch Index Reads
6,tih_rna_sample_00341_23LGNLLT4_1,TTGGATTGTC-CGGCTGTTAG,72677146,71333689,1343457,0,0.0178,0.9815,0.0185,0.0000
6,NTC_0001_0001_23LGNLLT4_1,AATTGGCACA-CAGTCGGAGT,845644,828494,17150,0,0.0002,0.9797,0.0203,0.0000
6,tih_rna_sample_00344_23LGNLLT4_1,AGGCAATCGC-ATGAGTCTGT,53240381,52459868,780513,0,0.0131,0.9853,0.0147,0.0000
6,tih_rna_sample_00345_23LGNLLT4_1,TGCAACACTA-CGTTCTGGTA,95550471,93864029,1686442,0,0.0234,0.9824,0.0176,0.0000
6,tih_rna_sample_00347_23LGNLLT4_1,GAATCGCCTG-CATTGACGGC,109729571,107614765,2114806,0,0.0269,0.9807,0.0193,0.0000
6,tih_rna_sample_00298_23LGNLLT4_1,TCGCATGACA-TTGGCCAATG,103396600,101622976,1773624,0,0.0254,0.9828,0.0172,0.0000
6,tih_rna_sample_00348_23LGNLLT4_1,TCAATACGTG-GCTGCTAATA,109176941,107226219,1950722,0,0.0268,0.9821,0.0179,0.0000
6,tih_rna_sample_00354_23LGNLLT4_1,ATTCTCCACG-TCGATGATCG,48614914,47715484,899430,0,0.0119,0.9815,0.0185,0.0000
6,tih_rna_sample_00477_23LGNLLT4_1,TGTTACAGAG-TGTGTACCAG,126651603,122976884,3674719,0,0.0311,0.9710,0.0290,0.0000
6,tih_rna_sample_00355_23LGNLLT4_1,TTACGGACGC-ATTGGCCAGC,107003164,105099628,1903536,0,0.0263,0.9822,0.0178,0.0000
6,tih_rna_sample_00358_23LGNLLT4_1,CCAATGTTGA-CTTGAATGTC,71615867,70584275,1031592,0,0.0176,0.9856,0.0144,0.0000
6,tih_rna_sample_00303_23LGNLLT4_1,CGTACTTAGA-CCGATGTTCA,82682358,81287879,1394479,0,0.0203,0.9831,0.0169,0.0000
6,tih_rna_sample_00360_23LGNLLT4_1,GCCGTGAACA-GCACCACCAT,53838425,52791052,1047373,0,0.0132,0.9805,0.0195,0.0000
6,tih_rna_sample_00566_23LGNLLT4_1,AGGAGACCAC-TACCACGTAG,122475096,120443981,2031115,0,0.0301,0.9834,0.0166,0.0000
6,tih_rna_sample_00483_23LGNLLT4_1,GAAGCAAGCG-TCACCGACTA,75339877,73830453,1509424,0,0.0185,0.9800,0.0200,0.0000
6,tih_rna_sample_00307_23LGNLLT4_1,AACGCGACTG-GACCTACGAG,75435410,74135295,1300115,0,0.0185,0.9828,0.0172,0.0000
6,tih_rna_sample_00485_23LGNLLT4_1,TTCGCGGACT-AGAGAGTGGT,118663759,116665906,1997853,0,0.0291,0.9832,0.0168,0.0000
6,tih_rna_sample_00308_23LGNLLT4_1,TCGTGACGAC-GTGACTAACT,68155129,67083501,1071628,0,0.0167,0.9843,0.0157,0.0000
6,tih_rna_sample_00309_23LGNLLT4_1,TCAATCTAGC-TCCGAATAAG,106564272,104915852,1648420,0,0.0261,0.9845,0.0155,0.0000
6,tih_rna_sample_00487_23LGNLLT4_1,GCGGAGTCAA-CTCTATAGCT,38342852,37630064,712788,0,0.0094,0.9814,0.0186,0.0000
6,tih_rna_sample_00494_23LGNLLT4_1,GATGCTAGAA-TGGATGCCAG,57001314,56091154,910160,0,0.0140,0.9840,0.0160,0.0000
6,tih_rna_sample_00499_23LGNLLT4_1,ACGATGGTTA-AATTGCTAGG,164880853,161971417,2909436,0,0.0405,0.9824,0.0176,0.0000
6,tih_rna_sample_00500_23LGNLLT4_1,AGAGCAGTAT-CAAGAGGAGG,148401288,145883503,2517785,0,0.0364,0.9830,0.0170,0.0000
6,tih_rna_sample_00501_23LGNLLT4_1,TTGTGATCCT-ATGAAGGCAT,136607922,134575653,2032269,0,0.0335,0.9851,0.0149,0.0000
6,tih_rna_sample_00452_23LGNLLT4_1,TAAGATCGGA-TTCATCCGTG,135298218,133363881,1934337,0,0.0332,0.9857,0.0143,0.0000
6,tih_rna_sample_00505_23LGNLLT4_1,TTAGTTGCTG-ATGGCGGATT,47804878,47060166,744712,0,0.0117,0.9844,0.0156,0.0000
6,tih_rna_sample_00508_23LGNLLT4_1,AGTCAGATGC-CTCACACACT,90987732,89295047,1692685,0,0.0223,0.9814,0.0186,0.0000
6,tih_rna_sample_00312_23LGNLLT4_1,AGTACAACTG-CATTGAGTTC,103270425,101592300,1678125,0,0.0253,0.9838,0.0162,0.0000
6,tih_rna_sample_00509_23LGNLLT4_1,CTTAGTACGC-GCTACAACGA,130985817,128655541,2330276,0,0.0321,0.9822,0.0178,0.0000
6,tih_rna_sample_00510_23LGNLLT4_1,GTACGCATCG-GAGTTGTTCA,44003498,43113219,890279,0,0.0108,0.9798,0.0202,0.0000
6,tih_rna_sample_00512_23LGNLLT4_1,ACTTCCGTTC-CAATTCCGTG,116321398,114502826,1818572,0,0.0285,0.9844,0.0156,0.0000
6,FFPE_HD789_02_RNA_0011_23LGNLLT4_1,CCACCTGCTT-TGTTACCGTC,145482375,142575932,2906443,0,0.0357,0.9800,0.0200,0.0000
6,tih_rna_sample_00528_23LGNLLT4_1,TGGTGGTTGT-TACCTGTCAA,71688599,70594642,1093957,0,0.0176,0.9847,0.0153,0.0000
6,tih_rna_sample_00531_23LGNLLT4_1,ACGCAACACA-CATTCAGGAG,7602089,7449416,152673,0,0.0019,0.9799,0.0201,0.0000
6,tih_rna_sample_00535_23LGNLLT4_1,CCAGTGCACT-CCTCCGTATC,20526703,19990752,535951,0,0.0050,0.9739,0.0261,0.0000
6,tih_rna_sample_00317_23LGNLLT4_1,CATCAGGCGT-CGTGTTACCG,58456885,57301530,1155355,0,0.0143,0.9802,0.0198,0.0000
6,tih_rna_sample_00536_23LGNLLT4_1,ATCCTAGAAC-TGAAGTCTGC,6378432,6266880,111552,0,0.0016,0.9825,0.0175,0.0000
6,tih_rna_sample_00319_23LGNLLT4_1,GCCTAGAGTC-ATGGTTCTCT,121999756,120132657,1867099,0,0.0299,0.9847,0.0153,0.0000
6,tih_rna_sample_00543_23LGNLLT4_1,CTTACTCTCT-CTGCTTAAGG,35383470,34649935,733535,0,0.0087,0.9793,0.0207,0.0000
6,tih_rna_sample_00321_23LGNLLT4_1,CCGACAACCT-TTCTACCTGT,121939009,119738791,2200218,0,0.0299,0.9820,0.0180,0.0000
6,FFPE_V4_0001_RNA_0001_23LGNLLT4_1,GATCTGTATG-ATCGAAGAGC,118640105,116653626,1986479,0,0.0291,0.9833,0.0167,0.0000
6,tih_rna_sample_00322_23LGNLLT4_1,ATAGGCAGTG-CAGAACTTAG,90830606,89450057,1380549,0,0.0223,0.9848,0.0152,0.0000
6,tih_rna_sample_00323_23LGNLLT4_1,GAATAGAGTG-CACAGCGTCT,54606390,53669561,936829,0,0.0134,0.9828,0.0172,0.0000
6,tih_rna_sample_00331_23LGNLLT4_1,ATGGTTGTTG-AGTTATGAGG,84631925,83285402,1346523,0,0.0208,0.9841,0.0159,0.0000
6,tih_rna_sample_00548_23LGNLLT4_1,ACAATAGCAC-GTATGCCTAT,47483607,46685041,798566,0,0.0117,0.9832,0.0168,0.0000
6,tih_rna_sample_00332_23LGNLLT4_1,CTACAAGTTC-GCACCATGAA,27118965,26637758,481207,0,0.0067,0.9823,0.0177,0.0000
6,tih_rna_sample_00549_23LGNLLT4_1,AACCTGATCT-ATTCCGTCCG,94270407,92447556,1822851,0,0.0231,0.9807,0.0193,0.0000
6,Undetermined,,152658631,152658631,0,0,0.0375,1.0000,0.0000,0.0000