#==================================================
#All numbers are READ count
#==================================================

Total records:                          653338826

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        56023335
Unmapped reads:                         3015804
mapq < mapq_cut (non-unique):           21032549

mapq >= mapq_cut (unique):              573267138
Read-1:                                 286788685
Read-2:                                 286478453
Reads map to '+':                       286668917
Reads map to '-':                       286598221
Non-splice reads:                       302119086
Splice reads:                           271148052
Reads mapped in proper pairs:           571125540
Proper-paired reads map to different chrom:0