#==================================================
#All numbers are READ count
#==================================================

Total records:                          652118499

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        77534253
Unmapped reads:                         5408863
mapq < mapq_cut (non-unique):           25801125

mapq >= mapq_cut (unique):              543374258
Read-1:                                 271846010
Read-2:                                 271528248
Reads map to '+':                       271697713
Reads map to '-':                       271676545
Non-splice reads:                       320585874
Splice reads:                           222788384
Reads mapped in proper pairs:           541660182
Proper-paired reads map to different chrom:0