#==================================================
#All numbers are READ count
#==================================================

Total records:                          643346501

QC failed:                              0
Optical/PCR duplicate:                  0
Non primary hits                        46489977
Unmapped reads:                         3635033
mapq < mapq_cut (non-unique):           17093191

mapq >= mapq_cut (unique):              576128300
Read-1:                                 288231585
Read-2:                                 287896715
Reads map to '+':                       288081872
Reads map to '-':                       288046428
Non-splice reads:                       345744864
Splice reads:                           230383436
Reads mapped in proper pairs:           573717258
Proper-paired reads map to different chrom:0