NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (GM24385_0001_RNA_0001_23H5VFLT4_s48) - dev_rna_exp0003_2cae617 - Workflow Tracker

Runs
dev_rna_exp0003_2cae617
Tasks
GATK4_MARKDUPLICATES (GM24385_0001_RNA_0001_23H5VFLT4_s48)

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Task Info

Status: succeeded
Hash: c1fccdd2b645
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: GM24385_0001_RNA_0001_23H5VFLT4_s48
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 92/5f7c34
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/92/5f7c347de47ecd4b8949aa6eb3b0e0
Native ID: nf-925f7c347de47ecd4b8949aa6eb3b0e0-d0ecb

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 115.0 GB / 148.0 GB
Process I/O (rchar / wchar): 33.8 GB / 20.8 GB
Disk I/O (read / write): - / 20.8 GB
Host: i-07e211b8b1b0daca1 ( on-demand)

Runtime

Submitted: May 16, 2026 2:19:01 AM
Completed: May 16, 2026 3:11:54 AM
Total Duration: 52m 52s

Phases

Queue: 15s
Execution: 51m 4s
Stage/Unstage: 1m 33s

Attempt 1

Execution

Status: failed
Hash: d9/07414c
Failure Reason: spot eviction ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d9/07414c86dad09a9897cbde450e9b7d
Native ID: nf-d907414c86dad09a9897cbde450e9b7d-1278a

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-069b5f408f94cd128 ( spot)

Runtime

Submitted: May 16, 2026 2:11:54 AM
Completed: May 16, 2026 2:19:01 AM
Total Duration: 7m 6s

Phases

Queue: 7m 6s
Execution: -
Stage/Unstage: -