File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_33.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0004/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_33.FusionInspector.fusions.abridged.tsv
- Size
- 5.7 KB
- Workflow Run
- dev_rna_exp0004_2cae617
- Published
- May 16, 2026 5:57 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 5150 | 5 | 5150.00 | 4.99 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 63 | 1673 | 80.56 | 3.08 | GT | 1.8892 | AG | 1.7819 | 17.4909 | 627 | 0 |
| FGFR3--TACC3 | 12 | 3 | 12.00 | 0.01 | FGFR3^ENSG00000068078.20 | 9872 | chr4:1806928:+ | TACC3^ENSG00000013810.20 | 27587 | chr4:1739699:+ | INCL_NON_REF_SPLICE | YES | 138 | 1644 | 0.12 | 0.01 | AC | 1.8892 | AG | 1.7819 | 0.0407 | 633 | 0 |
| TMPRSS2--ERG | 4651 | 0 | 4651.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 56 | 4652.00 | 81.61 | GT | 1.6895 | AG | 1.9219 | 15.7809 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 1437 | 1 | 1437.00 | 1.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 72 | 42 | 19.71 | 33.47 | GT | 1.8892 | AG | 1.8062 | 4.8792 | 1171 | 0 |
| TPM3--NTRK1 | 1291 | 1 | 1291.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5427 | 23 | 0.24 | 53.88 | GT | 1.9329 | AG | 1.6895 | 4.3838 | 355 | 0 |
| ETV6--NTRK3 | 1240 | 0 | 1240.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1805 | 10 | 0.69 | 112.82 | GT | 1.7819 | AG | 1.9656 | 4.2073 | 1252 | 0 |
| LMNA--NTRK1 | 1112 | 7 | 1112.00 | 7.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 3365 | 246 | 0.33 | 4.53 | GT | 1.7465 | AG | 1.5058 | 3.7968 | 947 | 0 |
| LMNA--NTRK1 | 3 | 0 | 3.00 | 0.00 | LMNA^ENSG00000160789.23 | 17703 | chr1:156130743:+ | NTRK1^ENSG00000198400.13 | 40944 | chr1:156875561:+ | INCL_NON_REF_SPLICE | YES | 3460 | 714 | 0.00 | 0.01 | CT | 1.6729 | CC | 1.9329 | 0.0102 | 1299 | 0 |
| CCDC6--RET | 1026 | 3 | 1026.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1463 | 282 | 0.70 | 3.64 | GT | 1.8892 | AG | 1.8323 | 3.4914 | 2092 | 0 |
| NCOA4--RET | 1011 | 3 | 1011.00 | 3.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1981 | 282 | 0.51 | 3.59 | GT | 1.9086 | AG | 1.8323 | 3.4405 | 5144 | 0 |
| KIF5B--RET | 781 | 4 | 781.00 | 3.96 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 1001 | 10 | 0.78 | 71.45 | GT | 1.9656 | AG | 1.9656 | 2.6633 | 3178 | 0 |
| KIF5B--RET | 7 | 4 | 7.00 | 0.04 | KIF5B^ENSG00000170759.11 | 19979 | chr10:32017141:- | RET^ENSG00000165731.20 | 38835 | chr10:43114483:+ | INCL_NON_REF_SPLICE | YES | 1001 | 15 | 0.01 | 0.75 | TA | 1.9656 | TC | 1.9086 | 0.0239 | 3175 | 0 |
| EML4--ALK | 778 | 0 | 778.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 390 | 22 | 1.99 | 33.87 | GT | 1.6895 | AG | 1.9086 | 2.6398 | 1550 | 0 |
| CD74--ROS1 | 734 | 0 | 734.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 18475 | 30 | 0.04 | 23.71 | GT | 1.7819 | AG | 1.7465 | 2.4905 | 2407 | 0 |
| CD74--ROS1 | 6 | 0 | 6.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 49869 | chr6:117321340:- | INCL_NON_REF_SPLICE | YES | 18475 | 502 | 0.00 | 0.01 | GT | 1.7819 | GC | 1.7232 | 0.0204 | 1651 | 0 |
| CD74--ROS1 | 5 | 0 | 5.00 | 0.00 | CD74^ENSG00000019582.16 | 4989 | chr5:150404681:- | ROS1^ENSG00000047936.11 | 48729 | chr6:117324417:- | INCL_NON_REF_SPLICE | YES | 19928 | 0 | 0.00 | 6.00 | GG | 1.7819 | TT | 1.5301 | 0.017 | 2407 | 0 |
| CD74--ROS1 | 3 | 0 | 3.00 | 0.00 | CD74^ENSG00000019582.16 | 4992 | chr5:150404678:- | ROS1^ENSG00000047936.11 | 48734 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 18481 | 44 | 0.00 | 0.09 | AC | 1.9329 | TG | 1.8892 | 0.0102 | 2407 | 0 |
| SLC34A2--ROS1 | 627 | 8 | 627.00 | 7.95 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 29 | 636.00 | 21.20 | GT | 1.8892 | AG | 1.7465 | 2.1544 | 999 | 0 |
| SLC34A2--ROS1 | 4 | 8 | 4.00 | 0.05 | SLC34A2^ENSG00000157765.13 | 6086 | chr4:25664332:+ | ROS1^ENSG00000047936.11 | 58024 | chr6:117324416:- | INCL_NON_REF_SPLICE | YES | 0 | 19 | 13.00 | 0.65 | AA | 1.7968 | TA | 1.5301 | 0.0138 | 998 | 0 |
| PAX8--PPARG | 422 | 0 | 422.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 63 | 14 | 6.61 | 28.20 | GT | 1.8295 | AG | 1.9329 | 1.4318 | 1923 | 0 |
| EGFR--SEPTIN14 | 414 | 4 | 414.00 | 4.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 8 | 18 | 46.56 | 22.05 | GT | 1.8892 | AG | 1.9899 | 1.4183 | 658 | 0 |
| SLC45A3--BRAF | 415 | 0 | 415.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 2 | 911 | 138.67 | 0.46 | GT | 1.5628 | AG | 1.7465 | 1.4081 | 2599 | 0 |
| TFG--NTRK1 | 364 | 0 | 364.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1319 | 23 | 0.28 | 15.21 | GT | 1.9329 | AG | 1.6895 | 1.2351 | 883 | 0 |
| STX16--NPEPL1 | 137 | 8 | 137.00 | 7.88 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 852 | 139 | 0.17 | 1.04 | GT | 1.7968 | AG | 1.8256 | 0.4915 | 1940 | 0 |
| STX16--NPEPL1 | 6 | 3 | 6.00 | 0.12 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 910 | 139 | 0.01 | 0.07 | GT | 1.8062 | AG | 1.8256 | 0.0208 | 2729 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 19290 | chr20:58693737:+ | ONLY_REF_SPLICE | YES | 852 | 772 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.7819 | 0.0034 | 1248 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1593 | 139 | 0.00 | 0.01 | GT | 1.9899 | AG | 1.8256 | 0.0034 | 1258 | 0 |
| TLK2--FAM157A | 61 | 0 | 61.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | FAM157A^ENSG00000236438.7 | 45187 | chr3:198180755:+ | ONLY_REF_SPLICE | YES | 390 | 53 | 0.16 | 1.15 | GT | 1.8892 | AG | 1.8892 | 0.207 | 2733 | 0 |
29 rows