File Info
- Filename
- tih_rna_sample_00473_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0004/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/tih_rna_sample_00473_23KMKGLT4_1.FusionInspector.fusions.abridged.tsv
- Size
- 6.1 KB
- Workflow Run
- dev_rna_exp0004_2cae617
- Published
- May 16, 2026 5:57 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| TPCN2--CDH2 | 208 | 7 | 208.00 | 5.73 | TPCN2^ENSG00000162341.18 | 6696 | chr11:69063967:+ | CDH2^ENSG00000170558.10 | 52827 | chr18:27963521:- | ONLY_REF_SPLICE | YES | 2801 | 43 | 0.08 | 4.91 | GT | 1.7968 | AG | 1.9899 | 0.7216 | 3453 | 0 |
| TPCN2--CDH2 | 130 | 2 | 130.00 | 0.72 | TPCN2^ENSG00000162341.18 | 5719 | chr11:69062990:+ | CDH2^ENSG00000170558.10 | 52827 | chr18:27963521:- | ONLY_REF_SPLICE | YES | 2375 | 43 | 0.06 | 3.02 | GT | 1.8062 | AG | 1.9899 | 0.4413 | 2505 | 0 |
| TPCN2--CDH2 | 16 | 7 | 16.00 | 0.44 | TPCN2^ENSG00000162341.18 | 7799 | chr11:69067605:+ | CDH2^ENSG00000170558.10 | 52827 | chr18:27963521:- | ONLY_REF_SPLICE | YES | 2888 | 43 | 0.01 | 0.55 | GT | 1.6895 | AG | 1.9899 | 0.0555 | 3583 | 0 |
| TPCN2--CDH2 | 4 | 7 | 4.00 | 0.11 | TPCN2^ENSG00000162341.18 | 7799 | chr11:69067605:+ | CDH2^ENSG00000170558.10 | 50366 | chr18:27965982:- | ONLY_REF_SPLICE | YES | 2888 | 10 | 0.00 | 1.09 | GT | 1.6895 | AG | 1.9219 | 0.0139 | 2344 | 0 |
| TPCN2--CDH2 | 5 | 0 | 5.00 | 0.00 | TPCN2^ENSG00000162341.18 | 1175 | chr11:69049106:+ | CDH2^ENSG00000170558.10 | 52827 | chr18:27963521:- | ONLY_REF_SPLICE | YES | 1407 | 43 | 0.00 | 0.14 | GT | 1.8892 | AG | 1.9899 | 0.0169 | 1278 | 0 |
| TPCN2--CDH2 | 5 | 0 | 5.00 | 0.00 | TPCN2^ENSG00000162341.18 | 4612 | chr11:69057694:+ | CDH2^ENSG00000170558.10 | 52827 | chr18:27963521:- | ONLY_REF_SPLICE | YES | 2797 | 43 | 0.00 | 0.14 | GT | 1.9086 | AG | 1.9899 | 0.0169 | 1480 | 0 |
| UBE2Q2P1--GOLGA6L10 | 133 | 0 | 133.00 | 0.00 | UBE2Q2P1^ENSG00000189136.9 | 13590 | chr15:84526781:- | GOLGA6L10^ENSG00000278662.5 | 17775 | chr15:82347629:- | ONLY_REF_SPLICE | YES | 0 | 28 | 134.00 | 4.62 | GT | 1.8323 | AG | 1.7819 | 0.449 | 1203 | 0 |
| TLK2--AC240565.1 | 69 | 0 | 69.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 488 | 58 | 0.14 | 1.19 | GT | 1.8892 | AG | 1.8892 | 0.233 | 1734 | 0 |
| TLK2--AC240565.1 | 2 | 0 | 2.00 | 0.00 | TLK2^ENSG00000146872.18 | 14714 | chr17:62552397:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 754 | 58 | 0.00 | 0.05 | GT | 1.5219 | AG | 1.8892 | 0.0068 | 1594 | 0 |
| CTTN--MYEOV | 67 | 0 | 67.00 | 0.00 | CTTN^ENSG00000085733.16 | 1211 | chr11:70398614:+ | MYEOV^ENSG00000172927.8 | 31725 | chr11:69341510:+ | ONLY_REF_SPLICE | YES | 1049 | 5 | 0.06 | 11.33 | GT | 1.4295 | AG | 1.8892 | 0.2262 | 5538 | 0 |
| SHANK2--TPCN2 | 65 | 0 | 65.00 | 0.00 | SHANK2^ENSG00000162105.20 | 24435 | chr11:70820364:- | TPCN2^ENSG00000162341.18 | 63120 | chr11:69054033:+ | ONLY_REF_SPLICE | YES | 1523 | 1118 | 0.04 | 0.06 | GT | 1.8256 | AG | 1.6895 | 0.2195 | 1111 | 0 |
| SHANK2--TPCN2 | 6 | 0 | 6.00 | 0.00 | SHANK2^ENSG00000162105.20 | 24435 | chr11:70820364:- | TPCN2^ENSG00000162341.18 | 66557 | chr11:69062884:+ | ONLY_REF_SPLICE | YES | 1523 | 2868 | 0.00 | 0.00 | GT | 1.8256 | AG | 1.6402 | 0.0203 | 1967 | 0 |
| SHANK2--TPCN2 | 1 | 0 | 1.00 | 0.00 | SHANK2^ENSG00000162105.20 | 14758 | chr11:71056481:- | TPCN2^ENSG00000162341.18 | 73316 | chr11:69078482:+ | ONLY_REF_SPLICE | YES | 1411 | 2087 | 0.00 | 0.00 | GT | 1.9329 | AG | 1.3383 | 0.0034 | 1688 | 0 |
| SHANK2--TPCN2 | 1 | 0 | 1.00 | 0.00 | SHANK2^ENSG00000162105.20 | 14758 | chr11:71056481:- | TPCN2^ENSG00000162341.18 | 66557 | chr11:69062884:+ | ONLY_REF_SPLICE | YES | 1411 | 2868 | 0.00 | 0.00 | GT | 1.9329 | AG | 1.6402 | 0.0034 | 2437 | 0 |
| SHANK2--TPCN2 | 1 | 0 | 1.00 | 0.00 | SHANK2^ENSG00000162105.20 | 19469 | chr11:70896501:- | TPCN2^ENSG00000162341.18 | 66557 | chr11:69062884:+ | ONLY_REF_SPLICE | YES | 1478 | 2868 | 0.00 | 0.00 | GT | 1.7968 | AG | 1.6402 | 0.0034 | 2227 | 0 |
| SHANK2--CABLES1 | 55 | 0 | 55.00 | 0.00 | SHANK2^ENSG00000162105.20 | 6858 | chr11:71147120:- | CABLES1^ENSG00000134508.12 | 67384 | chr18:23188838:+ | ONLY_REF_SPLICE | YES | 1570 | 200 | 0.04 | 0.28 | GT | 1.8256 | AG | 1.8295 | 0.1857 | 1383 | 0 |
| SS18--AC090403.1 | 41 | 3 | 41.00 | 1.24 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | AC090403.1^ENSG00000264151.6 | 34795 | chr18:27374247:- | ONLY_REF_SPLICE | YES | 2853 | 0 | 0.02 | 45.00 | GT | 1.9656 | AG | 1.5329 | 0.1426 | 3538 | 0 |
| SS18--AC090403.1 | 40 | 4 | 40.00 | 2.24 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | AC090403.1^ENSG00000264151.6 | 33711 | chr18:27392867:- | ONLY_REF_SPLICE | YES | 2853 | 1 | 0.02 | 22.50 | GT | 1.9656 | AG | 1.8323 | 0.1427 | 2571 | 0 |
| SS18--AC090403.1 | 33 | 0 | 33.00 | 0.00 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | AC090403.1^ENSG00000264151.6 | 39903 | chr18:27337187:- | ONLY_REF_SPLICE | YES | 2853 | 1 | 0.01 | 17.00 | GT | 1.9656 | AG | 1.7465 | 0.1114 | 2176 | 0 |
| SS18--AC090403.1 | 16 | 3 | 16.00 | 0.48 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | AC090403.1^ENSG00000264151.6 | 38807 | chr18:27338702:- | ONLY_REF_SPLICE | YES | 2853 | 0 | 0.01 | 20.00 | GT | 1.9656 | AG | 1.9329 | 0.0556 | 2221 | 0 |
| SS18--AC090403.1 | 1 | 3 | 1.00 | 0.03 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | AC090403.1^ENSG00000264151.6 | 37095 | chr18:27341131:- | ONLY_REF_SPLICE | YES | 2853 | 0 | 0.00 | 5.00 | GT | 1.9656 | AG | 1.9329 | 0.0035 | 2437 | 0 |
| RNGTT--BACH2 | 20 | 2 | 20.00 | 1.33 | RNGTT^ENSG00000111880.16 | 13738 | chr6:88769774:- | BACH2^ENSG00000112182.15 | 24708 | chr6:90271941:- | ONLY_REF_SPLICE | YES | 256 | 5 | 0.09 | 3.83 | GT | 1.2729 | AG | 1.9086 | 0.072 | 5109 | 0 |
| RNGTT--BACH2 | 5 | 2 | 5.00 | 0.33 | RNGTT^ENSG00000111880.16 | 13738 | chr6:88769774:- | BACH2^ENSG00000112182.15 | 25801 | chr6:90252590:- | ONLY_REF_SPLICE | YES | 256 | 3 | 0.03 | 2.00 | GT | 1.2729 | AG | 1.8256 | 0.018 | 4440 | 0 |
| RNGTT--BACH2 | 4 | 2 | 4.00 | 0.27 | RNGTT^ENSG00000111880.16 | 13738 | chr6:88769774:- | BACH2^ENSG00000112182.15 | 28146 | chr6:90206681:- | ONLY_REF_SPLICE | YES | 256 | 3 | 0.03 | 1.75 | GT | 1.2729 | AG | 1.8062 | 0.0144 | 3751 | 0 |
| RNGTT--BACH2 | 1 | 2 | 1.00 | 0.07 | RNGTT^ENSG00000111880.16 | 13738 | chr6:88769774:- | BACH2^ENSG00000112182.15 | 28151 | chr6:90206676:- | ONLY_REF_SPLICE | YES | 256 | 3 | 0.02 | 1.00 | GT | 1.2729 | AG | 1.9656 | 0.0036 | 3751 | 0 |
| VPS33A--CLIP1 | 16 | 1 | 16.00 | 0.94 | VPS33A^ENSG00000139719.11 | 3923 | chr12:122263572:- | CLIP1^ENSG00000130779.22 | 64446 | chr12:122274162:- | ONLY_REF_SPLICE | YES | 199 | 849 | 0.09 | 0.02 | GT | 1.9656 | AG | 1.6895 | 0.0572 | 312 | 0 |
| VPS33A--CLIP1 | 1 | 1 | 1.00 | 0.06 | VPS33A^ENSG00000139719.11 | 5110 | chr12:122261261:- | CLIP1^ENSG00000130779.22 | 46460 | chr12:122334110:- | ONLY_REF_SPLICE | NO | 295 | 817 | 0.01 | 0.00 | GT | 1.9086 | AG | 1.6402 | 0.0036 | 3301 | 0 |
| IMMT--FP236383.3 | 12 | 0 | 6.00 | 0.00 | IMMT^ENSG00000132305.21 | 1135 | chr2:86195338:- | FP236383.3^ENSG00000280441.3 | 28508 | chr21:8450147:+ | ONLY_REF_SPLICE | YES | 275 | 5 | 0.05 | 2.17 | GT | 1.3383 | AG | 1.9329 | 0.0203 | 2737 | 0 |
| IMMT--FP236383.3 | 12 | 0 | 6.00 | 0.00 | IMMT^ENSG00000132305.21 | 1135 | chr2:86195338:- | FP236383.3^ENSG00000280441.3 | 23557 | chr21:8405960:+ | ONLY_REF_SPLICE | YES | 275 | 1 | 0.05 | 6.50 | GT | 1.3383 | AG | 1.9329 | 0.0203 | 2739 | 0 |
| SS18--CHST9 | 11 | 0 | 11.00 | 0.00 | SS18^ENSG00000141380.14 | 3537 | chr18:26087501:- | CHST9^ENSG00000154080.14 | 29185 | chr18:27142905:- | ONLY_REF_SPLICE | YES | 2861 | 0 | 0.00 | 12.00 | GT | 1.9656 | AG | 1.7465 | 0.0371 | 2269 | 0 |
31 rows