File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_20.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0004/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_20.FusionInspector.fusions.abridged.tsv
- Size
- 4.2 KB
- Workflow Run
- dev_rna_exp0004_2cae617
- Published
- May 16, 2026 6:23 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1199 | 2 | 1199.00 | 2.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 39 | 1950 | 30.05 | 0.62 | GT | 1.8892 | AG | 1.7819 | 4.0754 | 627 | 0 |
| TMPRSS2--ERG | 799 | 0 | 799.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 26 | 800.00 | 29.63 | GT | 1.6895 | AG | 1.9219 | 2.7112 | 1104 | 0 |
| LMNA--NTRK1 | 495 | 1 | 495.00 | 1.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1582 | 64 | 0.31 | 7.65 | GT | 1.7465 | AG | 1.5058 | 1.6831 | 947 | 0 |
| FGFR3--BAIAP2L1 | 375 | 0 | 375.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 41 | 27 | 8.95 | 13.43 | GT | 1.8892 | AG | 1.8062 | 1.2725 | 1171 | 0 |
| TPM3--NTRK1 | 354 | 0 | 354.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5707 | 6 | 0.06 | 50.71 | GT | 1.9329 | AG | 1.6895 | 1.2012 | 355 | 0 |
| ETV6--NTRK3 | 322 | 2 | 322.00 | 2.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1708 | 2 | 0.19 | 108.33 | GT | 1.7819 | AG | 1.9656 | 1.0994 | 1252 | 0 |
| NCOA4--RET | 280 | 3 | 280.00 | 3.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1615 | 76 | 0.18 | 3.69 | GT | 1.9086 | AG | 1.8323 | 0.9603 | 5144 | 0 |
| CCDC6--RET | 251 | 0 | 251.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1342 | 76 | 0.19 | 3.27 | GT | 1.8892 | AG | 1.8323 | 0.8517 | 2092 | 0 |
| CD74--ROS1 | 209 | 3 | 209.00 | 3.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 17463 | 17 | 0.01 | 11.83 | GT | 1.7819 | AG | 1.7465 | 0.7194 | 2407 | 0 |
| EML4--ALK | 208 | 0 | 208.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 406 | 12 | 0.51 | 16.08 | GT | 1.6895 | AG | 1.9086 | 0.7058 | 1550 | 0 |
| KIF5B--RET | 201 | 0 | 201.00 | 0.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 919 | 7 | 0.22 | 25.25 | GT | 1.9656 | AG | 1.9656 | 0.6821 | 3178 | 0 |
| SLC34A2--ROS1 | 184 | 4 | 184.00 | 4.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 17 | 189.00 | 10.50 | GT | 1.8892 | AG | 1.7465 | 0.638 | 999 | 0 |
| STX16--NPEPL1 | 162 | 2 | 162.00 | 2.00 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 920 | 142 | 0.18 | 1.15 | GT | 1.7968 | AG | 1.8256 | 0.5565 | 1940 | 0 |
| STX16--NPEPL1 | 3 | 0 | 3.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1475 | 142 | 0.00 | 0.03 | GT | 1.9899 | AG | 1.8256 | 0.0102 | 1258 | 0 |
| TFG--NTRK1 | 140 | 0 | 140.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1132 | 6 | 0.12 | 20.14 | GT | 1.9329 | AG | 1.6895 | 0.4751 | 883 | 0 |
| SLC45A3--BRAF | 118 | 0 | 118.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 1069 | 119.00 | 0.11 | GT | 1.5628 | AG | 1.7465 | 0.4004 | 2599 | 0 |
| PAX8--PPARG | 110 | 0 | 110.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 25 | 5 | 4.27 | 18.50 | GT | 1.8295 | AG | 1.9329 | 0.3733 | 1923 | 0 |
| PAX8--PPARG | 4 | 0 | 4.00 | 0.00 | PAX8^ENSG00000125618.18 | 9704 | chr2:113235404:- | PPARG^ENSG00000132170.23 | 31395 | chr3:12379695:+ | INCL_NON_REF_SPLICE | YES | 30 | 4 | 0.16 | 1.00 | CT | 1.8323 | TT | 1.9086 | 0.0136 | 1933 | 0 |
| EGFR--SEPTIN14 | 107 | 1 | 107.00 | 1.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 24 | 21.80 | 4.36 | GT | 1.8892 | AG | 1.9899 | 0.3665 | 658 | 0 |
| TLK2--AC240565.1 | 97 | 1 | 97.00 | 1.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 397 | 46 | 0.25 | 2.11 | GT | 1.8892 | AG | 1.8892 | 0.3326 | 1734 | 0 |
21 rows