File Info
- Filename
- FFPE_V4_0001_RNA_0005_23KMKGLT4_4.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0004/B23KMKGLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_V4_0001_RNA_0005_23KMKGLT4_4.FusionInspector.fusions.abridged.tsv
- Size
- 4.0 KB
- Workflow Run
- dev_rna_exp0004_2cae617
- Published
- May 16, 2026 6:30 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 1421 | 0 | 1421.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 86 | 2388 | 16.34 | 0.60 | GT | 1.8892 | AG | 1.7819 | 4.8239 | 627 | 0 |
| TMPRSS2--ERG | 1171 | 0 | 1171.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 12 | 23 | 90.15 | 48.83 | GT | 1.6895 | AG | 1.9219 | 3.9752 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 513 | 0 | 513.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 85 | 34 | 5.98 | 14.69 | GT | 1.8892 | AG | 1.8062 | 1.7415 | 1171 | 0 |
| LMNA--NTRK1 | 508 | 0 | 508.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1574 | 79 | 0.32 | 6.36 | GT | 1.7465 | AG | 1.5058 | 1.7245 | 947 | 0 |
| TPM3--NTRK1 | 300 | 0 | 300.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 4678 | 11 | 0.06 | 25.08 | GT | 1.9329 | AG | 1.6895 | 1.0184 | 355 | 0 |
| CCDC6--RET | 295 | 0 | 295.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1368 | 67 | 0.22 | 4.35 | GT | 1.8892 | AG | 1.8323 | 1.0014 | 2092 | 0 |
| CCDC6--RET | 6 | 0 | 6.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1436 | chr10:59906121:- | RET^ENSG00000165731.20 | 31589 | chr10:43116586:+ | INCL_NON_REF_SPLICE | YES | 1356 | 71 | 0.01 | 0.10 | TG | 1.8892 | GA | 1.8323 | 0.0204 | 2094 | 0 |
| NCOA4--RET | 274 | 2 | 274.00 | 2.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1485 | 67 | 0.19 | 4.07 | GT | 1.9086 | AG | 1.8323 | 0.937 | 5144 | 0 |
| ETV6--NTRK3 | 274 | 1 | 274.00 | 1.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1466 | 5 | 0.19 | 46.00 | GT | 1.7819 | AG | 1.9656 | 0.9336 | 1252 | 0 |
| CD74--ROS1 | 251 | 0 | 251.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 18030 | 8 | 0.01 | 28.00 | GT | 1.7819 | AG | 1.7465 | 0.8521 | 2407 | 0 |
| KIF5B--RET | 179 | 1 | 179.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 722 | 6 | 0.25 | 25.86 | GT | 1.9656 | AG | 1.9656 | 0.6111 | 3178 | 0 |
| SLC34A2--ROS1 | 161 | 8 | 161.00 | 7.85 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 8 | 170.00 | 18.89 | GT | 1.8892 | AG | 1.7465 | 0.5731 | 999 | 0 |
| SLC34A2--ROS1 | 3 | 8 | 3.00 | 0.15 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58027 | chr6:117324413:- | INCL_NON_REF_SPLICE | YES | 0 | 9 | 12.00 | 1.20 | GA | 1.7465 | AT | 1.8892 | 0.0107 | 1001 | 0 |
| SLC45A3--BRAF | 98 | 0 | 98.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 1 | 857 | 49.50 | 0.12 | GT | 1.5628 | AG | 1.7465 | 0.3327 | 2599 | 0 |
| EML4--ALK | 95 | 0 | 95.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 272 | 37 | 0.35 | 2.53 | GT | 1.6895 | AG | 1.9086 | 0.3225 | 1550 | 0 |
| PAX8--PPARG | 90 | 0 | 90.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 69 | 10 | 1.30 | 8.27 | GT | 1.8295 | AG | 1.9329 | 0.3055 | 1923 | 0 |
| EGFR--SEPTIN14 | 87 | 0 | 87.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 1 | 34 | 44.00 | 2.51 | GT | 1.8892 | AG | 1.9899 | 0.2953 | 658 | 0 |
| TFG--NTRK1 | 44 | 0 | 44.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 636 | 11 | 0.07 | 3.75 | GT | 1.9329 | AG | 1.6895 | 0.1494 | 883 | 0 |
| TLK2--AC240565.1 | 41 | 1 | 41.00 | 1.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 295 | 37 | 0.15 | 1.13 | GT | 1.8892 | AG | 1.8892 | 0.1426 | 1734 | 0 |
20 rows