NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (FFPE_V4_0001_RNA_0005_23KMKGLT4_19) - dev_rna_exp0004_2cae617 - Workflow Tracker

Runs
dev_rna_exp0004_2cae617
Tasks
GATK4_MARKDUPLICATES (FFPE_V4_0001_RNA_0005_23KMKGLT4_19)

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Task Info

Status: succeeded
Hash: e0030c1c5a69
Process: NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES
Tag: FFPE_V4_0001_RNA_0005_23KMKGLT4_19
Attempts: 2

Attempt 2

Execution

Status: succeeded
Hash: 4e/711d2b
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4e/711d2bc9189efb04d4fbe2c7ed5983
Native ID: nf-4e711d2bc9189efb04d4fbe2c7ed5983-9f596

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): 1.5 / 2
Memory (peak / alloc): 116.7 GB / 148.0 GB
Process I/O (rchar / wchar): 59.3 GB / 39.1 GB
Disk I/O (read / write): 4.1 GB / 39.1 GB
Host: i-082d8bd997a1cf886 ( on-demand)

Runtime

Submitted: May 16, 2026 3:15:08 AM
Completed: May 16, 2026 4:01:27 AM
Total Duration: 46m 18s

Phases

Queue: 14s
Execution: 43m 4s
Stage/Unstage: 3m 0s

Attempt 1

Execution

Status: failed
Hash: 2f/732742
Failure Reason: BackoffLimitExceeded ()
Exit Code: -
Container: 292967571998.dkr.ecr.us-west-2.amazonaws.com/biocontainers/mulled-v2-d9e7bad0f7fbc8f4458d5c3ab7ffaaf0235b59fb:f857e2d6cc88d35580d01cf39e0959a68b83c1d9-0
Work Directory: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2f/732742438a732cd1a1707ae2437f96
Native ID: nf-2f732742438a732cd1a1707ae2437f96-1b7e1

View Metrics and Logs in Datadog View Workdir

Resources

CPU (used / alloc): - / 2
Memory (peak / alloc): - / 74.0 GB
Process I/O (rchar / wchar): - / -
Disk I/O (read / write): - / -
Host: i-07f2b7ad94646b111 ( spot)

Runtime

Submitted: May 16, 2026 2:31:04 AM
Completed: May 16, 2026 3:15:08 AM
Total Duration: 44m 4s

Phases

Queue: 44m 4s
Execution: -
Stage/Unstage: -