#FusionName JunctionReadCount SpanningFragCount est_J est_S SpliceType LeftGene LeftBreakpoint RightGene RightBreakpoint LargeAnchorSupport FFPM LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy annots PANK2--MAVS 1244 36 1244.00 36.00 ONLY_REF_SPLICE PANK2^ENSG00000125779.23 chr20:3889728:+ MAVS^ENSG00000088888.18 chr20:3854558:+ YES_LDAS 4.3306 GT 1.5656 AG 1.5628 ["Klijn_CellLines","CCLE_StarF2019","INTRACHROMOSOMAL[chr20:0.01Mb]","LOCAL_REARRANGEMENT:+:[12716]"] TCF7L2--AL158212.1 723 30 722.99 23.30 ONLY_REF_SPLICE TCF7L2^ENSG00000148737.17 chr10:113040126:+ AL158212.1^ENSG00000225292.2 chr10:112888735:+ YES_LDAS 2.5249 GT 1.9219 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr10:0.04Mb]","LOCAL_REARRANGEMENT:+:[44136]"] COMMD10--AP3S1 282 19 282.00 19.00 ONLY_REF_SPLICE COMMD10^ENSG00000145781.9 chr5:116092700:+ AP3S1^ENSG00000177879.17 chr5:115895087:+ YES_LDAS 1.0184 GT 1.9329 AG 1.8256 ["YOSHIHARA_TCGA","Klijn_CellLines","GTEx_recurrent_StarF2019","DEEPEST2019","ChimerPub","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr5:0.17Mb]"] LEPROT--LEPR 272 10 272.00 10.00 ONLY_REF_SPLICE LEPROT^ENSG00000213625.9 chr1:65425378:+ LEPR^ENSG00000116678.20 chr1:65565546:+ YES_LDAS 0.954 GT 1.8256 AG 1.9219 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr1:0.09Mb]","NEIGHBORS[89682]"] TCF7L2--AL158212.1 194 16 194.00 2.96 ONLY_REF_SPLICE TCF7L2^ENSG00000148737.17 chr10:113040126:+ AL158212.1^ENSG00000225292.2 chr10:112905977:+ YES_LDAS 0.6664 GT 1.9219 AG 1.9899 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr10:0.04Mb]","LOCAL_REARRANGEMENT:+:[44136]"] SPAG9--MBTD1 173 3 173.00 2.88 ONLY_REF_SPLICE SPAG9^ENSG00000008294.21 chr17:51120354:- MBTD1^ENSG00000011258.16 chr17:51201696:- YES_LDAS 0.595 GT 1.7819 AG 1.6402 ["Klijn_CellLines","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr17:0.06Mb]","LOCAL_REARRANGEMENT:-:[56557]"] AC026191.1--SRGAP3 114 2 114.00 2.00 ONLY_REF_SPLICE AC026191.1^ENSG00000254485.5 chr3:9326010:- SRGAP3^ENSG00000196220.16 chr3:9124917:- YES_LDAS 0.3925 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.04Mb]","NEIGHBORS[42903]"] ABLIM3--PTPRB 97 0 97.00 0.00 INCL_NON_REF_SPLICE ABLIM3^ENSG00000173210.20 chr5:149251419:+ PTPRB^ENSG00000127329.16 chr12:70558894:- NO_LDAS 0.3282 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr12]"] GDPD5--MAP6 90 12 90.00 12.00 ONLY_REF_SPLICE GDPD5^ENSG00000158555.15 chr11:75477619:- MAP6^ENSG00000171533.12 chr11:75608322:- YES_LDAS 0.3451 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr11:0.06Mb]","LOCAL_REARRANGEMENT:-:[60977]"] MMP24OS--IGH@-ext 70 0 68.26 0.00 INCL_NON_REF_SPLICE MMP24OS^ENSG00000126005.17 chr20:35277774:- IGH@-ext^IGH.g@-ext chr14:105605894:- NO_LDAS 0.2309 AG 1.2419 CC 1.5058 ["INTERCHROMOSOMAL[chr20--chr14]"] SLC22A11--RNH1 60 0 60.00 0.00 INCL_NON_REF_SPLICE SLC22A11^ENSG00000168065.16 chr11:64556383:+ RNH1^ENSG00000023191.17 chr11:502144:- NO_LDAS 0.203 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr11:64.05Mb]"] CHCHD10--AC005064.1 48 0 48.00 0.00 INCL_NON_REF_SPLICE CHCHD10^ENSG00000250479.9 chr22:23767834:- AC005064.1^ENSG00000234715.2 chr7:103446122:+ NO_LDAS 0.1624 GT 1.6402 AG 1.1589 ["INTERCHROMOSOMAL[chr22--chr7]"] AKAP12--MT-RNR1 38 0 38.00 0.00 INCL_NON_REF_SPLICE AKAP12^ENSG00000131016.17 chr6:151351470:+ MT-RNR1^ENSG00000211459.2 chrM:1419:+ YES_LDAS 0.1286 GT 1.6402 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chrM]"] RPL17--RPL17P12 35 0 35.00 0.00 INCL_NON_REF_SPLICE RPL17^ENSG00000265681.7 chr18:49491405:- RPL17P12^ENSG00000230559.1 chr2:146194373:+ NO_LDAS 0.1184 GT 1.9219 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTERCHROMOSOMAL[chr18--chr2]"] SEPTIN7P14--PSPH 34 0 29.55 0.00 ONLY_REF_SPLICE SEPTIN7P14^ENSG00000245958.6 chr4:119455133:+ PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.1 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr7]"] BPTF--DCXR 33 0 16.50 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ DCXR^ENSG00000169738.8 chr17:82037080:- NO_LDAS 0.0558 GT 1.5628 AG 1.6049 ["INTRACHROMOSOMAL[chr17:14.05Mb]"] BPTF--BSND 33 0 16.50 0.00 INCL_NON_REF_SPLICE BPTF^ENSG00000171634.18 chr17:67945620:+ BSND^ENSG00000162399.9 chr1:55006997:+ NO_LDAS 0.0558 GT 1.5628 AG 1.4256 ["INTERCHROMOSOMAL[chr17--chr1]"] UMAD1--GLCCI1 31 0 31.00 0.00 ONLY_REF_SPLICE UMAD1^ENSG00000219545.11 chr7:7801743:+ GLCCI1^ENSG00000106415.13 chr7:8003908:+ YES_LDAS 0.1049 GT 1.9656 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[776]"] FBXO25--SEPTIN14 29 0 29.00 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0981 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] NPM1--MT-RNR2 27 0 13.48 0.00 INCL_NON_REF_SPLICE NPM1^ENSG00000181163.14 chr5:171391799:+ MT-RNR2^ENSG00000210082.2 chrM:1959:+ NO_LDAS 0.0456 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chrM]"] ACTR5--RN7SKP231 26 0 26.00 0.00 INCL_NON_REF_SPLICE ACTR5^ENSG00000101442.10 chr20:38756039:+ RN7SKP231^ENSG00000200151.1 chr8:91595092:+ YES_LDAS 0.088 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr8]"] SEPTIN14--AP006222.1 25 0 25.00 0.00 INCL_NON_REF_SPLICE SEPTIN14^ENSG00000154997.9 chr7:55795924:- AP006222.1^ENSG00000228463.10 chr1:289370:- YES_LDAS 0.0846 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr1]"] RN7SL702P--RN7SL4P 24 0 21.92 0.00 INCL_NON_REF_SPLICE RN7SL702P^ENSG00000243980.3 chrY:12273695:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ YES_LDAS 0.0742 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrY--chr3]"] ARHGAP29-AS1--NME2 22 0 22.00 0.00 ONLY_REF_SPLICE ARHGAP29-AS1^ENSG00000226835.3 chr1:94249519:+ NME2^ENSG00000243678.12 chr17:51169937:+ YES_LDAS 0.0744 GT 1.8295 AG 1.5546 ["INTERCHROMOSOMAL[chr1--chr17]"] AC008740.1--CRYM-AS1 21 0 21.00 0.00 INCL_NON_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21338921:+ YES_LDAS 0.071 GT 1.7232 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] AC211476.4--CCDC146 20 1 4.00 0.10 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73069531:+ CCDC146^ENSG00000135205.15 chr7:77236947:+ YES_LDAS 0.0138 GT 1.4566 AG 1.9329 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] NUPR2--PSPH 19 0 7.47 0.00 ONLY_REF_SPLICE NUPR2^ENSG00000185290.4 chr7:56116015:- PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.0253 GT 1.8892 AG 1.9656 ["BodyMap","GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[63077]"] GOLGA6L17P--GOLGA2P6 19 0 7.82 0.00 INCL_NON_REF_SPLICE GOLGA6L17P^ENSG00000277741.4 chr15:82521523:+ GOLGA2P6^ENSG00000241621.1 chr10:30370881:- YES_LDAS 0.0265 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr10]"] ZBED3-AS1--PDE8B 18 0 18.00 0.00 ONLY_REF_SPLICE ZBED3-AS1^ENSG00000250802.7 chr5:77118521:+ PDE8B^ENSG00000113231.14 chr5:77311994:+ YES_LDAS 0.0609 GT 1.9329 AG 1.8256 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[43540]"] IGH@-ext--CREB3L2 18 0 18.00 0.00 INCL_NON_REF_SPLICE IGH@-ext^IGH.g@-ext chr14:105760805:- CREB3L2^ENSG00000182158.15 chr7:137928171:- NO_LDAS 0.0609 CC 1.4566 CC 1.9656 ["INTERCHROMOSOMAL[chr14--chr7]"] HLA-C--MUC16 18 0 18.00 0.00 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269489:- MUC16^ENSG00000181143.15 chr19:8848985:- NO_LDAS 0.0609 GT 1.9656 AG 1.8062 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr6--chr19]"] PALLD--PPM1D 18 1 18.00 1.00 ONLY_REF_SPLICE PALLD^ENSG00000129116.19 chr4:168711923:+ PPM1D^ENSG00000170836.12 chr17:60656599:+ YES_LDAS 0.0643 GT 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr4--chr17]"] HLA-A--C12orf40 17 0 17.00 0.00 INCL_NON_REF_SPLICE HLA-A^ENSG00000206503.13 chr6:29942951:+ C12orf40^ENSG00000180116.15 chr12:39716794:+ NO_LDAS 0.0575 AT 1.5656 AC 1.7056 ["INTERCHROMOSOMAL[chr6--chr12]"] MIR4713HG--GLDN 17 3 17.00 2.73 ONLY_REF_SPLICE MIR4713HG^ENSG00000259240.1 chr15:51037681:+ GLDN^ENSG00000186417.14 chr15:51377449:+ YES_LDAS 0.0667 GT 1.9656 AG 1.8892 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr15:0.05Mb]","NEIGHBORS[47743]"] RGSL1--MYOF 16 0 8.00 0.00 ONLY_REF_SPLICE RGSL1^ENSG00000121446.20 chr1:182507266:+ MYOF^ENSG00000138119.17 chr10:93452141:- NO_LDAS 0.0271 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr10]"] IGL@-ext--ZNF562 16 0 16.00 0.00 INCL_NON_REF_SPLICE IGL@-ext^IGL.g@-ext chr22:22415614:+ ZNF562^ENSG00000171466.10 chr19:9660874:- NO_LDAS 0.0541 AC 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr19]"] DPY19L1P1--MYOF 16 0 8.00 0.00 ONLY_REF_SPLICE DPY19L1P1^ENSG00000229358.3 chr7:32581572:- MYOF^ENSG00000138119.17 chr10:93452141:- NO_LDAS 0.0271 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr10]"] CMTM8--CMTM7 16 0 16.00 0.00 ONLY_REF_SPLICE CMTM8^ENSG00000170293.9 chr3:32239119:+ CMTM7^ENSG00000153551.14 chr3:32441840:+ YES_LDAS 0.0541 GT 1.9656 AG 1.9086 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.02Mb]","NEIGHBORS[21377]"] AGAP5--AC022400.4 16 1 15.50 1.00 INCL_NON_REF_SPLICE AGAP5^ENSG00000172650.14 chr10:73692043:- AC022400.4^ENSG00000272140.2 chr10:73713332:- YES_LDAS 0.0558 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:-:[5854]"] ZNF625--AGRN 15 0 15.00 0.00 INCL_NON_REF_SPLICE ZNF625^ENSG00000257591.6 chr19:12146098:- AGRN^ENSG00000188157.15 chr1:1051746:+ NO_LDAS 0.0507 GT 1.8892 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chr1]"] RBBP4--C1QBP 15 0 7.50 0.00 ONLY_REF_SPLICE RBBP4^ENSG00000162521.19 chr1:32662337:+ C1QBP^ENSG00000108561.8 chr17:5434966:- YES_LDAS 0.0254 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr17]"] CHSY1--AC090907.2 15 0 15.00 0.00 ONLY_REF_SPLICE CHSY1^ENSG00000131873.7 chr15:101235082:- AC090907.2^ENSG00000259755.1 chr15:101050779:- YES_LDAS 0.0507 GT 1.8323 AG 1.6402 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr15:0.09Mb]","NEIGHBORS[89661]"] AC015712.1--C1QBP 15 0 7.50 0.00 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100855348:+ C1QBP^ENSG00000108561.8 chr17:5434966:- YES_LDAS 0.0254 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr17]"] PICALM--SYTL2 15 1 15.00 1.00 ONLY_REF_SPLICE PICALM^ENSG00000073921.18 chr11:85974708:- SYTL2^ENSG00000137501.17 chr11:85758114:- YES_LDAS 0.0541 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr11:0.15Mb]"] BUB3--LINC02641 14 1 14.00 1.00 ONLY_REF_SPLICE BUB3^ENSG00000154473.18 chr10:123162828:+ LINC02641^ENSG00000230131.6 chr10:123361319:+ YES_LDAS 0.0508 GT 1.1589 AG 1.5058 ["INTRACHROMOSOMAL[chr10:0.19Mb]"] LDLRAD3--PRR5L 14 2 14.00 2.00 INCL_NON_REF_SPLICE LDLRAD3^ENSG00000179241.13 chr11:36098461:+ PRR5L^ENSG00000135362.14 chr11:36296290:+ YES_LDAS 0.0542 GT 1.9329 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.06Mb]","NEIGHBORS[64152]"] SAMD5--SASH1 13 0 13.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ SASH1^ENSG00000111961.18 chr6:148390134:+ YES_LDAS 0.044 GT 1.8295 AG 1.9219 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] RN7SL732P--RN7SL128P 13 0 8.44 0.00 INCL_NON_REF_SPLICE RN7SL732P^ENSG00000264618.2 chrX:39786593:- RN7SL128P^ENSG00000240869.3 chr6:20421837:- YES_LDAS 0.0286 GT 1.8892 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chrX--chr6]"] CHST11--MME 13 0 13.00 0.00 INCL_NON_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ MME^ENSG00000196549.13 chr3:155183570:+ NO_LDAS 0.044 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr3]"] BOLA2B--SMG1P2 13 1 13.00 0.57 INCL_NON_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193358:- SMG1P2^ENSG00000205534.6 chr16:29548658:- YES_LDAS 0.0459 GT 1.9329 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:0.60Mb]"] USP22--RHBDF2 12 0 12.00 0.00 INCL_NON_REF_SPLICE USP22^ENSG00000124422.12 chr17:21002946:- RHBDF2^ENSG00000129667.13 chr17:76493111:- NO_LDAS 0.0406 GT 0.9056 AG 1.2366 ["INTRACHROMOSOMAL[chr17:55.43Mb]"] RPS3AP11--SEPTIN7 12 0 4.00 0.00 INCL_NON_REF_SPLICE RPS3AP11^ENSG00000230116.1 chr1:42491744:+ SEPTIN7^ENSG00000122545.20 chr7:35832798:+ NO_LDAS 0.0135 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr1--chr7]"] RBM14--RBM4 12 0 12.00 0.00 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ RBM4^ENSG00000173933.21 chr11:66639700:+ YES_LDAS 0.0406 GT 1.7465 AG 1.9086 ["HGNC_GENEFAM","Greger_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[8733]"] PKNOX2--MEIS3 12 0 12.00 0.00 ONLY_REF_SPLICE PKNOX2^ENSG00000165495.16 chr11:125385722:+ MEIS3^ENSG00000105419.18 chr19:47417350:- NO_LDAS 0.0406 GT 1.9656 AG 1.9656 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr19]"] HLA-L--HLA-V 12 0 12.00 0.00 ONLY_REF_SPLICE HLA-L^ENSG00000243753.5 chr6:30259697:+ HLA-V^ENSG00000181126.13 chr6:29792437:+ YES_LDAS 0.0406 GT 1.7056 AG 1.8323 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.46Mb]"] UBE2Q2P1--GOLGA2P6 11 0 11.00 0.00 INCL_NON_REF_SPLICE UBE2Q2P1^ENSG00000189136.9 chr15:84435875:- GOLGA2P6^ENSG00000241621.1 chr10:30370881:- YES_LDAS 0.0372 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr10]"] ACTR3C--AC092681.1 11 0 11.00 0.00 INCL_NON_REF_SPLICE ACTR3C^ENSG00000106526.10 chr7:150284753:- AC092681.1^ENSG00000224016.2 chr7:149909705:- YES_LDAS 0.0372 GT 1.9899 AG 1.9899 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.33Mb]"] TLK2--AC240565.1 10 0 3.03 0.00 ONLY_REF_SPLICE TLK2^ENSG00000146872.18 chr17:62560126:+ AC240565.1^ENSG00000280136.2 chr17:106864:- YES_LDAS 0.0103 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr17:62.34Mb]"] FUS--CTNNA1 10 0 10.00 0.00 INCL_NON_REF_SPLICE FUS^ENSG00000089280.19 chr16:31184352:+ CTNNA1^ENSG00000044115.21 chr5:138934073:+ NO_LDAS 0.0338 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr5]"] AC215522.2--AL627309.5 10 0 10.00 0.00 ONLY_REF_SPLICE AC215522.2^ENSG00000282572.2 chr7:20834:- AL627309.5^ENSG00000241860.7 chr1:173862:- YES_LDAS 0.0338 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] AC073107.1--PSPH 10 0 2.87 0.00 ONLY_REF_SPLICE AC073107.1^ENSG00000272693.4 chr7:65770467:- PSPH^ENSG00000146733.14 chr7:56021231:- YES_LDAS 0.0097 GT 1.9086 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:9.60Mb]"] AC008740.1--CRYM-AS1 10 0 10.00 0.00 ONLY_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ YES_LDAS 0.0338 GT 1.7232 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] WDR27--AL135910.1 10 1 10.00 0.67 ONLY_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169582836:- AL135910.1^ENSG00000272848.2 chr6:169430712:- YES_LDAS 0.0361 GT 1.6729 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS[4737]"] AC073529.1--MID1 10 1 10.00 0.83 ONLY_REF_SPLICE AC073529.1^ENSG00000234129.8 chrX:11055936:- MID1^ENSG00000101871.16 chrX:10567603:- YES_LDAS 0.0366 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","NEIGHBORS[13924]"] YAF2--RYBP 9 0 9.00 0.00 INCL_NON_REF_SPLICE YAF2^ENSG00000015153.15 chr12:42238155:- RYBP^ENSG00000163602.11 chr3:72446621:- YES_LDAS 0.0304 GT 1.5656 AG 1.4566 ["INTERCHROMOSOMAL[chr12--chr3]"] TMED3--MINAR1 9 0 9.00 0.00 ONLY_REF_SPLICE TMED3^ENSG00000166557.14 chr15:79314005:+ MINAR1^ENSG00000169330.9 chr15:79456098:+ YES_LDAS 0.0304 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS[4904]"] GUSBP13--NAIP 9 0 1.50 0.00 ONLY_REF_SPLICE GUSBP13^ENSG00000198237.8 chr5:69920867:+ NAIP^ENSG00000249437.8 chr5:71003857:- YES_LDAS 0.0051 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr5:1.05Mb]"] ATAD3B--AC124947.1 9 0 9.00 0.00 ONLY_REF_SPLICE ATAD3B^ENSG00000160072.20 chr1:1477350:+ AC124947.1^ENSG00000257252.6 chr12:93339736:- NO_LDAS 0.0304 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr12]"] BOLA2B--SMG1P2 9 1 3.20 0.14 ONLY_REF_SPLICE BOLA2B^ENSG00000169627.9 chr16:30193358:- SMG1P2^ENSG00000205534.6 chr16:29548762:- YES_LDAS 0.0113 GT 1.9329 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:0.60Mb]"] SLC7A5P1--SMG1 8 0 8.00 0.00 ONLY_REF_SPLICE SLC7A5P1^ENSG00000260727.2 chr16:29613103:- SMG1^ENSG00000157106.17 chr16:18900044:- YES_LDAS 0.0271 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr16:10.69Mb]"] SAMD5--AL033504.1 8 0 8.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147947472:+ YES_LDAS 0.0271 GT 1.8295 AG 1.5058 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] RN7SL564P--RN7SL128P 8 0 1.41 0.00 INCL_NON_REF_SPLICE RN7SL564P^ENSG00000240606.3 chr6:122745488:+ RN7SL128P^ENSG00000240869.3 chr6:20421837:- YES_LDAS 0.0048 GT 1.8892 AG 1.7465 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:102.32Mb]"] PLEC--NUTM2F 8 0 1.60 0.00 INCL_NON_REF_SPLICE PLEC^ENSG00000178209.16 chr8:143925564:- NUTM2F^ENSG00000130950.14 chr9:94325374:- NO_LDAS 0.0054 GT 1.7465 AG 1.4295 ["INTERCHROMOSOMAL[chr8--chr9]"] PLEC--IMPDH2 8 0 1.60 0.00 INCL_NON_REF_SPLICE PLEC^ENSG00000178209.16 chr8:143925564:- IMPDH2^ENSG00000178035.13 chr3:49027844:- NO_LDAS 0.0054 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr3]"] PLEC--CRX 8 0 1.60 0.00 INCL_NON_REF_SPLICE PLEC^ENSG00000178209.16 chr8:143925564:- CRX^ENSG00000105392.16 chr19:47839401:+ NO_LDAS 0.0054 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr19]"] PLEC--AC109361.1 8 0 1.60 0.00 INCL_NON_REF_SPLICE PLEC^ENSG00000178209.16 chr8:143925564:- AC109361.1^ENSG00000249635.1 chr4:106020963:- NO_LDAS 0.0054 GT 1.7465 AG 1.6895 ["INTERCHROMOSOMAL[chr8--chr4]"] PKD1P2--NPIPB12 8 0 1.15 0.00 ONLY_REF_SPLICE PKD1P2^ENSG00000227827.3 chr16:16377056:+ NPIPB12^ENSG00000169203.16 chr16:29500083:- YES_LDAS 0.0039 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr16:13.11Mb]"] KLF7--KLF6 8 0 8.00 0.00 ONLY_REF_SPLICE KLF7^ENSG00000118263.15 chr2:207088458:- KLF6^ENSG00000067082.15 chr10:3779590:- YES_LDAS 0.0271 GT 1.7819 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr2--chr10]"] FBXO31--C16orf95 8 0 8.00 0.00 ONLY_REF_SPLICE FBXO31^ENSG00000103264.18 chr16:87333886:- C16orf95^ENSG00000260456.7 chr16:87315823:- YES_LDAS 0.0271 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.01Mb]","NEIGHBORS[9567]"] EIF4E3--FOXP1 8 0 8.00 0.00 ONLY_REF_SPLICE EIF4E3^ENSG00000163412.13 chr3:71690010:- FOXP1^ENSG00000114861.23 chr3:71493555:- YES_LDAS 0.0271 GT 1.7056 AG 1.9656 ["GTEx_recurrent_StarF2019","ChimerSeq","INTRACHROMOSOMAL[chr3:0.09Mb]","NEIGHBORS[91425]"] CPSF6--GRM8 8 0 8.00 0.00 INCL_NON_REF_SPLICE CPSF6^ENSG00000111605.18 chr12:69262562:+ GRM8^ENSG00000179603.18 chr7:126445313:- NO_LDAS 0.0271 GT 1.9899 AG 1.8256 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTERCHROMOSOMAL[chr12--chr7]"] CFAP74--ST7 8 0 8.00 0.00 INCL_NON_REF_SPLICE CFAP74^ENSG00000142609.18 chr1:1922177:- ST7^ENSG00000004866.22 chr7:117119693:+ NO_LDAS 0.0271 AT 1.8295 AC 1.9656 ["INTERCHROMOSOMAL[chr1--chr7]"] TVP23C--CDRT4 8 1 8.00 1.00 INCL_NON_REF_SPLICE TVP23C^ENSG00000175106.17 chr17:15503098:- CDRT4^ENSG00000239704.11 chr17:15440285:- YES_LDAS 0.0305 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] AC211476.4--CCDC146 8 1 2.67 0.07 ONLY_REF_SPLICE AC211476.4^ENSG00000277125.1 chr7:73072670:+ CCDC146^ENSG00000135205.15 chr7:77236947:+ YES_LDAS 0.0092 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr7:4.05Mb]"] RMND5A--ANAPC1P2 7 0 7.00 0.00 ONLY_REF_SPLICE RMND5A^ENSG00000153561.13 chr2:86741069:+ ANAPC1P2^ENSG00000231259.5 chr2:87052992:- YES_LDAS 0.0237 GT 1.8295 AG 1.9086 ["INTRACHROMOSOMAL[chr2:0.25Mb]"] RIMKLA--CAMSAP1 7 0 7.00 0.00 INCL_NON_REF_SPLICE RIMKLA^ENSG00000177181.15 chr1:42419655:+ CAMSAP1^ENSG00000130559.19 chr9:135883078:- NO_LDAS 0.0237 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr9]"] OR51M1--ABR 7 0 7.00 0.00 INCL_NON_REF_SPLICE OR51M1^ENSG00000184698.5 chr11:5392729:+ ABR^ENSG00000159842.15 chr17:1100735:- YES_LDAS 0.0237 GT 1.9656 AG 1.5628 ["INTERCHROMOSOMAL[chr11--chr17]"] EIF1AXP1--PDE4DIPP9 7 0 7.00 0.00 INCL_NON_REF_SPLICE EIF1AXP1^ENSG00000236698.1 chr1:16686040:- PDE4DIPP9^ENSG00000230239.1 chr1:16859049:+ YES_LDAS 0.0237 GT 1.8295 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.17Mb]"] CCDC74A--PTPN12 7 0 7.00 0.00 ONLY_REF_SPLICE CCDC74A^ENSG00000163040.15 chr2:131528627:+ PTPN12^ENSG00000127947.16 chr7:77585543:+ YES_LDAS 0.0237 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr7]"] BICD2--EEF1DP2 7 0 7.00 0.00 INCL_NON_REF_SPLICE BICD2^ENSG00000185963.14 chr9:92764505:- EEF1DP2^ENSG00000226721.2 chr9:92837729:- YES_LDAS 0.0237 GT 1.7819 AG 1.5058 ["INTRACHROMOSOMAL[chr9:0.07Mb]","LOCAL_REARRANGEMENT:-:[71993]"] MIR4713HG--GLDN 7 1 7.00 0.27 ONLY_REF_SPLICE MIR4713HG^ENSG00000259240.1 chr15:51037681:+ GLDN^ENSG00000186417.14 chr15:51383785:+ YES_LDAS 0.0246 GT 1.9656 AG 1.7056 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr15:0.05Mb]","NEIGHBORS[47743]"] TLK2P1--AC110079.1 6 0 3.90 0.00 INCL_NON_REF_SPLICE TLK2P1^ENSG00000226049.3 chr17:34039043:- AC110079.1^ENSG00000260404.3 chr4:118595912:+ YES_LDAS 0.0132 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr4]"] RPL23AP53--SEPTIN14 6 0 6.00 0.00 ONLY_REF_SPLICE RPL23AP53^ENSG00000223508.5 chr8:232129:- SEPTIN14^ENSG00000154997.9 chr7:55796092:- YES_LDAS 0.0203 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr8--chr7]"] RN7SL828P--RN7SL4P 6 0 1.47 0.00 INCL_NON_REF_SPLICE RN7SL828P^ENSG00000272075.2 chr11:118067471:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ NO_LDAS 0.005 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr11--chr3]"] RBM14--C11orf80 6 0 6.00 0.00 ONLY_REF_SPLICE RBM14^ENSG00000239306.5 chr11:66617057:+ C11orf80^ENSG00000173715.18 chr11:66759043:+ YES_LDAS 0.0203 GT 1.7465 AG 1.9656 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.11Mb]"] PCGF6--MNX1 6 0 3.00 0.00 INCL_NON_REF_SPLICE PCGF6^ENSG00000156374.16 chr10:103350983:- MNX1^ENSG00000130675.15 chr7:157005174:- NO_LDAS 0.0101 GT 1.2419 AG 1.2310 ["INTERCHROMOSOMAL[chr10--chr7]"] PCGF6--C10orf99 6 0 3.00 0.00 INCL_NON_REF_SPLICE PCGF6^ENSG00000156374.16 chr10:103350983:- C10orf99^ENSG00000188373.5 chr10:84184831:+ NO_LDAS 0.0101 GT 1.2419 AG 1.2310 ["INTRACHROMOSOMAL[chr10:19.12Mb]"] PAXBP1--GOLGA8A 6 0 6.00 0.00 INCL_NON_REF_SPLICE PAXBP1^ENSG00000159086.15 chr21:32771321:- GOLGA8A^ENSG00000175265.17 chr15:34381856:- NO_LDAS 0.0203 GT 1.2867 AG 1.8295 ["INTERCHROMOSOMAL[chr21--chr15]"] NPM1--NMD3P2 6 0 6.00 0.00 INCL_NON_REF_SPLICE NPM1^ENSG00000181163.14 chr5:171392978:+ NMD3P2^ENSG00000231504.1 chr7:56502379:- NO_LDAS 0.0203 GT 1.5219 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr7]"] NONO--KAT6A 6 0 6.00 0.00 INCL_NON_REF_SPLICE NONO^ENSG00000147140.17 chrX:71290778:+ KAT6A^ENSG00000083168.11 chr8:41933275:- NO_LDAS 0.0203 GC 1.7819 AG 1.4566 ["INTERCHROMOSOMAL[chrX--chr8]"] NME2--NME1 6 0 6.00 0.00 ONLY_REF_SPLICE NME2^ENSG00000243678.12 chr17:51168343:+ NME1^ENSG00000239672.8 chr17:51161160:+ YES_LDAS 0.0203 GT 1.8062 AG 1.5546 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_REARRANGEMENT:+:[3007]"] MT-ND6--MTRNR2L12 6 0 3.00 0.00 INCL_NON_REF_SPLICE MT-ND6^ENSG00000198695.2 chrM:14150:- MTRNR2L12^ENSG00000269028.3 chr3:96617452:- YES_LDAS 0.0101 GT 1.8295 AG 1.2419 ["INTERCHROMOSOMAL[chrM--chr3]"] HLA-C--NUMA1 6 0 6.00 0.00 INCL_NON_REF_SPLICE HLA-C^ENSG00000204525.17 chr6:31269493:- NUMA1^ENSG00000137497.18 chr11:72013673:- NO_LDAS 0.0203 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr11]"] EIF3C--NPIPB13 6 0 6.00 0.00 INCL_NON_REF_SPLICE EIF3C^ENSG00000184110.15 chr16:28735582:+ NPIPB13^ENSG00000198064.13 chr16:30245853:- YES_LDAS 0.0203 GT 1.9086 AG 1.9329 ["INTRACHROMOSOMAL[chr16:1.49Mb]"] BNIP3L--DPYSL2 6 0 6.00 0.00 ONLY_REF_SPLICE BNIP3L^ENSG00000104765.16 chr8:26408376:+ DPYSL2^ENSG00000092964.18 chr8:26581969:+ YES_LDAS 0.0203 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[8395]"] AC233699.1--TBC1D3 6 0 0.22 0.00 ONLY_REF_SPLICE AC233699.1^ENSG00000261499.2 chr17:36320547:+ TBC1D3^ENSG00000274611.3 chr17:38191030:- YES_LDAS 0.0007 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr17:1.86Mb]"] PKD1--NPIPA3 6 1 4.96 0.83 ONLY_REF_SPLICE PKD1^ENSG00000008710.20 chr16:2097868:- NPIPA3^ENSG00000224712.12 chr16:14716068:+ YES_LDAS 0.0196 GT 1.8323 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:12.57Mb]"] LINC00511--SLC39A11 6 1 6.00 1.00 ONLY_REF_SPLICE LINC00511^ENSG00000227036.8 chr17:72592203:- SLC39A11^ENSG00000133195.11 chr17:72649268:- YES_LDAS 0.0237 GT 1.8892 AG 1.9086 ["DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr17:0.01Mb]","LOCAL_REARRANGEMENT:-:[5477]"] SLC7A5--SMG1P1 6 5 3.00 1.36 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22454702:+ YES_LDAS 0.0147 GT 1.5301 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:65.34Mb]"] SSBP1--MGAM 5 0 5.00 0.00 ONLY_REF_SPLICE SSBP1^ENSG00000106028.11 chr7:141750384:+ MGAM^ENSG00000257335.8 chr7:142005529:+ YES_LDAS 0.0169 GT 1.8295 AG 1.5329 ["INTRACHROMOSOMAL[chr7:0.12Mb]"] RN7SL303P--RN7SL4P 5 0 2.38 0.00 INCL_NON_REF_SPLICE RN7SL303P^ENSG00000240116.3 chr8:22978059:+ RN7SL4P^ENSG00000263740.2 chr3:15738565:+ NO_LDAS 0.0081 GT 1.8892 AG 1.7968 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr8--chr3]"] RAB38--AP000676.5 5 0 5.00 0.00 ONLY_REF_SPLICE RAB38^ENSG00000123892.12 chr11:88149675:- AP000676.5^ENSG00000285835.1 chr11:87954906:- YES_LDAS 0.0169 GT 1.6729 AG 1.6402 ["INTRACHROMOSOMAL[chr11:0.07Mb]","NEIGHBORS[67643]"] PINX1--RP1L1 5 0 5.00 0.00 ONLY_REF_SPLICE PINX1^ENSG00000254093.9 chr8:10826152:- RP1L1^ENSG00000183638.6 chr8:10623220:- YES_LDAS 0.0169 GT 1.7232 AG 1.4566 ["INTRACHROMOSOMAL[chr8:0.05Mb]","NEIGHBORS[52774]"] LINC02210--CRHR1 5 0 5.00 0.00 ONLY_REF_SPLICE LINC02210^ENSG00000204650.14 chr17:45630158:+ CRHR1^ENSG00000120088.15 chr17:45807010:+ YES_LDAS 0.0169 GT 1.8323 AG 1.4295 ["INTRACHROMOSOMAL[chr17:0.13Mb]"] HIGD1A--HIGD1AP4 5 0 5.00 0.00 INCL_NON_REF_SPLICE HIGD1A^ENSG00000181061.14 chr3:42785252:- HIGD1AP4^ENSG00000233299.1 chr2:223398338:- YES_LDAS 0.0169 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr2]"] EXOC4--LRGUK 5 0 5.00 0.00 ONLY_REF_SPLICE EXOC4^ENSG00000131558.15 chr7:134007835:+ LRGUK^ENSG00000155530.3 chr7:134163397:+ YES_LDAS 0.0169 GT 1.9899 AG 1.8295 ["Klijn_CellLines","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[60710]"] ESRRB--AC016526.2 5 0 5.00 0.00 ONLY_REF_SPLICE ESRRB^ENSG00000119715.15 chr14:76310916:+ AC016526.2^ENSG00000258454.1 chr14:76252051:+ YES_LDAS 0.0169 GT 1.7465 AG 1.6895 ["INTRACHROMOSOMAL[chr14:0.05Mb]","LOCAL_REARRANGEMENT:+:[47238]"] CNTNAP3C--BX005040.4 5 0 5.00 0.00 INCL_NON_REF_SPLICE CNTNAP3C^ENSG00000283378.1 chr9:61453030:+ BX005040.4^ENSG00000283541.1 chr9:61097036:- YES_LDAS 0.0169 GT 1.8295 AG 1.8323 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] AC091057.4--AC091057.6 5 0 5.00 0.00 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ AC091057.6^ENSG00000285035.1 chr15:30716220:+ YES_LDAS 0.0169 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr15:0.03Mb]","LOCAL_REARRANGEMENT:+:[26911]"] CA13--CA3 5 1 5.00 0.83 INCL_NON_REF_SPLICE CA13^ENSG00000185015.8 chr8:85281639:+ CA3^ENSG00000164879.7 chr8:85439712:+ YES_LDAS 0.0197 GT 1.7968 AG 1.8892 ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] AC114763.1--NXPH2 5 1 5.00 0.83 ONLY_REF_SPLICE AC114763.1^ENSG00000228043.5 chr2:138500755:- NXPH2^ENSG00000144227.5 chr2:138671665:- YES_LDAS 0.0197 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.17Mb]"] SLC7A5--SMG1P1 5 5 2.50 1.14 ONLY_REF_SPLICE SLC7A5^ENSG00000103257.9 chr16:87868885:- SMG1P1^ENSG00000237296.9 chr16:22451620:+ YES_LDAS 0.0124 GT 1.5301 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:65.34Mb]"] TAS2R14--PRR4 4 0 4.00 0.00 ONLY_REF_SPLICE TAS2R14^ENSG00000212127.6 chr12:11034782:- PRR4^ENSG00000111215.12 chr12:10848407:- YES_LDAS 0.0135 GT 1.6402 AG 1.8062 ["INTRACHROMOSOMAL[chr12:0.09Mb]","NEIGHBORS[87933]"] SYN2--PPARG 4 0 4.00 0.00 ONLY_REF_SPLICE SYN2^ENSG00000157152.17 chr3:12183372:+ PPARG^ENSG00000132170.23 chr3:12379704:+ YES_LDAS 0.0135 GT 1.6729 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.10Mb]","NEIGHBORS[95336]"] SMIM13--STIL 4 0 2.00 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ STIL^ENSG00000123473.16 chr1:47313156:- NO_LDAS 0.0068 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr1]"] PPP1R7--PAEP 4 0 4.00 0.00 ONLY_REF_SPLICE PPP1R7^ENSG00000115685.15 chr2:241169867:+ PAEP^ENSG00000122133.17 chr9:135566192:+ YES_LDAS 0.0135 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr9]"] LINC02728--GAB2 4 0 4.00 0.00 ONLY_REF_SPLICE LINC02728^ENSG00000251323.3 chr11:78425337:- GAB2^ENSG00000033327.13 chr11:78280901:- YES_LDAS 0.0135 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[5634]"] INTS9-AS1--WDR37 4 0 4.00 0.00 ONLY_REF_SPLICE INTS9-AS1^ENSG00000254034.2 chr8:28798641:+ WDR37^ENSG00000047056.16 chr10:1080011:+ YES_LDAS 0.0135 GT 1.9329 AG 1.8892 ["GTEx_recurrent_StarF2019","INTERCHROMOSOMAL[chr8--chr10]"] HULC--AGAP5 4 0 4.00 0.00 INCL_NON_REF_SPLICE HULC^ENSG00000285219.2 chr6:8547214:+ AGAP5^ENSG00000172650.14 chr10:73697720:- NO_LDAS 0.0135 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr10]"] GOLGA6L5P--GOLGA6B 4 0 0.41 0.00 ONLY_REF_SPLICE GOLGA6L5P^ENSG00000230373.8 chr15:84514915:- GOLGA6B^ENSG00000215186.6 chr15:72658558:+ YES_LDAS 0.0014 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr15:11.84Mb]"] GDAP1--MIR2052HG 4 0 4.00 0.00 ONLY_REF_SPLICE GDAP1^ENSG00000104381.14 chr8:74363053:+ MIR2052HG^ENSG00000254349.6 chr8:74612853:+ YES_LDAS 0.0135 GT 1.7465 AG 1.9219 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.08Mb]","NEIGHBORS[81768]"] FBXO25--AC240565.1 4 0 0.94 0.00 ONLY_REF_SPLICE FBXO25^ENSG00000147364.17 chr8:435707:+ AC240565.1^ENSG00000280136.2 chr17:106864:- YES_LDAS 0.0032 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr17]"] DENND6B--CDC14A 4 0 4.00 0.00 INCL_NON_REF_SPLICE DENND6B^ENSG00000205593.12 chr22:50316025:- CDC14A^ENSG00000079335.20 chr1:100352508:+ NO_LDAS 0.0135 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr1]"] CMTM8--CMTM7 4 0 4.00 0.00 ONLY_REF_SPLICE CMTM8^ENSG00000170293.9 chr3:32239119:+ CMTM7^ENSG00000153551.14 chr3:32449454:+ YES_LDAS 0.0135 GT 1.9656 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.02Mb]","NEIGHBORS[21377]"] CCDC30--NUP85 4 0 4.00 0.00 ONLY_REF_SPLICE CCDC30^ENSG00000186409.18 chr1:42521256:+ NUP85^ENSG00000125450.11 chr17:75231340:+ YES_LDAS 0.0135 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr17]"] BX276092.9--AIFM2 4 0 4.00 0.00 INCL_NON_REF_SPLICE BX276092.9^ENSG00000283599.2 chrX:71668095:+ AIFM2^ENSG00000042286.15 chr10:70132789:- NO_LDAS 0.0135 GT 1.8062 AG 1.2419 ["INTERCHROMOSOMAL[chrX--chr10]"] BX005040.4--CNTNAP3C 4 0 4.00 0.00 ONLY_REF_SPLICE BX005040.4^ENSG00000283541.1 chr9:61096836:- CNTNAP3C^ENSG00000283378.1 chr9:61425702:+ YES_LDAS 0.0135 GT 1.8062 AG 1.9899 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] BCKDHB--AL359715.4 4 0 4.00 0.00 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.4^ENSG00000279022.1 chr6:80440685:+ YES_LDAS 0.0135 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[94460]"] AP003108.2--PPP1R32 4 0 4.00 0.00 ONLY_REF_SPLICE AP003108.2^ENSG00000256591.5 chr11:61430182:+ PPP1R32^ENSG00000162148.11 chr11:61481782:+ YES_LDAS 0.0135 GT 1.8256 AG 1.3996 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[12404]"] ANAPC1--RMND5A 4 0 1.33 0.00 ONLY_REF_SPLICE ANAPC1^ENSG00000153107.13 chr2:111815370:- RMND5A^ENSG00000153561.13 chr2:86740927:+ YES_LDAS 0.0045 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr2:24.83Mb]"] ACTB--HEYL 4 0 4.00 0.00 INCL_NON_REF_SPLICE ACTB^ENSG00000075624.17 chr7:5528004:- HEYL^ENSG00000163909.8 chr1:39624057:- NO_LDAS 0.0135 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr1]"] AC092032.2--RBAK 4 0 2.00 0.00 ONLY_REF_SPLICE AC092032.2^ENSG00000288620.1 chr7:4989177:+ RBAK^ENSG00000146587.18 chr7:5048033:+ YES_LDAS 0.0068 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[56644]"] AC092032.2--PMS2CL 4 0 2.00 0.00 ONLY_REF_SPLICE AC092032.2^ENSG00000288620.1 chr7:4989177:+ PMS2CL^ENSG00000187953.10 chr7:6731897:+ YES_LDAS 0.0068 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr7:1.72Mb]"] WDR72--AC011029.1 3 0 3.00 0.00 INCL_NON_REF_SPLICE WDR72^ENSG00000166415.15 chr15:53684542:- AC011029.1^ENSG00000287352.1 chr8:76306467:- YES_LDAS 0.0101 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr8]"] UXT--PDZK1IP1 3 0 3.00 0.00 INCL_NON_REF_SPLICE UXT^ENSG00000126756.12 chrX:47657205:- PDZK1IP1^ENSG00000162366.8 chr1:47183619:- NO_LDAS 0.0101 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chrX--chr1]"] UCHL3--LMO7 3 0 3.00 0.00 ONLY_REF_SPLICE UCHL3^ENSG00000118939.18 chr13:75569507:+ LMO7^ENSG00000136153.20 chr13:75713182:+ YES_LDAS 0.0101 GT 1.8323 AG 1.6895 ["Greger_Normal","INTRACHROMOSOMAL[chr13:0.01Mb]","NEIGHBORS[14414]"] TYW1B--CALN1 3 0 3.00 0.00 ONLY_REF_SPLICE TYW1B^ENSG00000277149.5 chr7:72616672:- CALN1^ENSG00000183166.11 chr7:72278810:- YES_LDAS 0.0101 GT 1.6729 AG 1.9086 ["INTRACHROMOSOMAL[chr7:0.11Mb]"] TVP23C--CDRT4 3 0 3.00 0.00 INCL_NON_REF_SPLICE TVP23C^ENSG00000175106.17 chr17:15503098:- CDRT4^ENSG00000239704.11 chr17:15438200:- YES_LDAS 0.0101 GT 1.9329 AG 1.6402 ["INTRACHROMOSOMAL[chr17:0.03Mb]","NEIGHBORS[26536]"] TRHDE--RBBP7 3 0 3.00 0.00 INCL_NON_REF_SPLICE TRHDE^ENSG00000072657.9 chr12:72272638:+ RBBP7^ENSG00000102054.18 chrX:16844626:- NO_LDAS 0.0101 GT 1.1589 AG 0.6998 ["INTERCHROMOSOMAL[chr12--chrX]"] RGS6--AC005993.1 3 0 3.00 0.00 ONLY_REF_SPLICE RGS6^ENSG00000182732.18 chr14:71964875:+ AC005993.1^ENSG00000266869.2 chr14:71908165:+ YES_LDAS 0.0101 GT 1.9086 AG 1.7465 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_REARRANGEMENT:+:[3833]"] RAD51B--CEP170P1 3 0 3.00 0.00 ONLY_REF_SPLICE RAD51B^ENSG00000182185.18 chr14:67887204:+ CEP170P1^ENSG00000154608.14 chr4:118493552:+ YES_LDAS 0.0101 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr4]"] POU5F1--TYW1 3 0 3.00 0.00 ONLY_REF_SPLICE POU5F1^ENSG00000204531.20 chr6:31166534:- TYW1^ENSG00000198874.13 chr7:67067285:+ YES_LDAS 0.0101 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr7]"] PINX1--RP1L1 3 0 3.00 0.00 ONLY_REF_SPLICE PINX1^ENSG00000254093.9 chr8:10820193:- RP1L1^ENSG00000183638.6 chr8:10623220:- YES_LDAS 0.0101 GT 1.8062 AG 1.4566 ["INTRACHROMOSOMAL[chr8:0.05Mb]","NEIGHBORS[52774]"] PIH1D1--WASF3 3 0 3.00 0.00 INCL_NON_REF_SPLICE PIH1D1^ENSG00000104872.11 chr19:49447338:- WASF3^ENSG00000132970.14 chr13:26687521:+ NO_LDAS 0.0101 GT 1.7968 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr13]"] MUC20--SMBD1P 3 0 3.00 0.00 ONLY_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195729739:+ SMBD1P^ENSG00000283426.1 chr3:195708747:+ YES_LDAS 0.0101 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.01Mb]","LOCAL_REARRANGEMENT:+:[9241]"] MUC20--AC026412.4 3 0 3.00 0.00 INCL_NON_REF_SPLICE MUC20^ENSG00000176945.17 chr3:195729739:+ AC026412.4^ENSG00000288549.1 chr5:1641022:- YES_LDAS 0.0101 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr5]"] LRRC37A--NSF 3 0 0.38 0.00 ONLY_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46306309:+ NSF^ENSG00000073969.18 chr17:46674414:+ YES_LDAS 0.0013 GT 1.6402 AG 1.7819 ["INTRACHROMOSOMAL[chr17:0.25Mb]"] LINC01565--C1QBP 3 0 3.00 0.00 ONLY_REF_SPLICE LINC01565^ENSG00000198685.4 chr3:128575266:- C1QBP^ENSG00000108561.8 chr17:5434966:- YES_LDAS 0.0101 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr17]"] LINC01145--SRGAP2B 3 0 3.00 0.00 ONLY_REF_SPLICE LINC01145^ENSG00000272419.6 chr1:145215639:- SRGAP2B^ENSG00000196369.11 chr1:144995200:- YES_LDAS 0.0101 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.07Mb]","NEIGHBORS[68571]"] KRTAP5-AS1--AP000867.5 3 0 3.00 0.00 INCL_NON_REF_SPLICE KRTAP5-AS1^ENSG00000233930.4 chr11:1598289:+ AP000867.5^ENSG00000286948.1 chr11:71563684:- YES_LDAS 0.0101 GT 1.6895 AG 1.8295 ["INTRACHROMOSOMAL[chr11:69.96Mb]"] HRH1--ATG7 3 0 3.00 0.00 ONLY_REF_SPLICE HRH1^ENSG00000196639.7 chr3:11154554:+ ATG7^ENSG00000197548.12 chr3:11298686:+ YES_LDAS 0.0101 GT 1.2867 AG 1.7968 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[8752]"] HPS5--FXYD2 3 0 3.00 0.00 INCL_NON_REF_SPLICE HPS5^ENSG00000110756.18 chr11:18291442:- FXYD2^ENSG00000137731.14 chr11:117819204:- NO_LDAS 0.0101 GT 1.5656 AG 1.7465 ["INTRACHROMOSOMAL[chr11:99.48Mb]"] FOXO1--LINC00598 3 0 3.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40466677:- YES_LDAS 0.0101 GT 1.7232 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 3 0 3.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40350302:- YES_LDAS 0.0101 GT 1.7232 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FBXL5--AC099550.1 3 0 3.00 0.00 ONLY_REF_SPLICE FBXL5^ENSG00000118564.15 chr4:15612266:- AC099550.1^ENSG00000251379.1 chr4:15362523:- YES_LDAS 0.0101 GT 1.9219 AG 1.5329 ["INTRACHROMOSOMAL[chr4:0.18Mb]"] CPSF6--AGT 3 0 3.00 0.00 INCL_NON_REF_SPLICE CPSF6^ENSG00000111605.18 chr12:69262566:+ AGT^ENSG00000135744.9 chr1:230693249:- NO_LDAS 0.0101 GT 1.8062 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr1]"] BX005040.4--CNTNAP3C 3 0 3.00 0.00 ONLY_REF_SPLICE BX005040.4^ENSG00000283541.1 chr9:61096836:- CNTNAP3C^ENSG00000283378.1 chr9:61440605:+ YES_LDAS 0.0101 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] BAG2--PRIM2 3 0 3.00 0.00 ONLY_REF_SPLICE BAG2^ENSG00000112208.11 chr6:57172810:+ PRIM2^ENSG00000146143.19 chr6:57318437:+ YES_LDAS 0.0101 GT 1.9086 AG 1.8323 ["ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr6:0.12Mb]"] AL139094.1--TMC4 3 0 3.00 0.00 INCL_NON_REF_SPLICE AL139094.1^ENSG00000220685.3 chr6:5066922:- TMC4^ENSG00000167608.12 chr19:54171991:- NO_LDAS 0.0101 GT 1.4566 AG 1.2310 ["INTERCHROMOSOMAL[chr6--chr19]"] AL022157.1--FAAH2 3 0 3.00 0.00 INCL_NON_REF_SPLICE AL022157.1^ENSG00000226310.1 chrX:57127058:+ FAAH2^ENSG00000165591.7 chrX:57292498:+ YES_LDAS 0.0101 GT 1.9656 AG 1.5656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.16Mb]"] AC104383.1--GALNT18 3 0 3.00 0.00 ONLY_REF_SPLICE AC104383.1^ENSG00000286959.1 chr11:11811462:- GALNT18^ENSG00000110328.6 chr11:11448936:- YES_LDAS 0.0101 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr11:0.16Mb]"] AC019186.1--ACVR1C 3 0 3.00 0.00 ONLY_REF_SPLICE AC019186.1^ENSG00000234584.1 chr2:157735944:- ACVR1C^ENSG00000123612.16 chr2:157587417:- YES_LDAS 0.0101 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.10Mb]","NEIGHBORS[96844]"] AC008740.1--CRYM-AS1 3 0 3.00 0.00 INCL_NON_REF_SPLICE AC008740.1^ENSG00000257403.2 chr16:21352138:+ CRYM-AS1^ENSG00000189149.12 chr16:21315907:+ YES_LDAS 0.0101 GT 1.7232 AG 1.9086 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8102]"] GNG10--UGCG 3 1 3.00 1.00 ONLY_REF_SPLICE GNG10^ENSG00000242616.4 chr9:111666946:+ UGCG^ENSG00000148154.10 chr9:111914605:+ YES_LDAS 0.0135 GT 1.9329 AG 1.7819 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr9:0.23Mb]"] CMC2--ARLNC1 3 1 3.00 0.60 ONLY_REF_SPLICE CMC2^ENSG00000103121.9 chr16:80997314:- ARLNC1^ENSG00000260896.6 chr16:80840222:- YES_LDAS 0.0121 GT 1.7232 AG 1.7056 ["INTRACHROMOSOMAL[chr16:0.07Mb]","NEIGHBORS[73766]"] AC242842.1--SEC22B2P 3 1 0.75 0.25 ONLY_REF_SPLICE AC242842.1^ENSG00000275557.1 chr1:149608516:+ SEC22B2P^ENSG00000274423.1 chr1:149351251:+ YES_LDAS 0.0033 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.25Mb]"] AC005993.1--RGS6 3 1 3.00 0.23 ONLY_REF_SPLICE AC005993.1^ENSG00000266869.2 chr14:71848736:+ RGS6^ENSG00000182732.18 chr14:72352095:+ YES_LDAS 0.0109 GT 1.9656 AG 1.8323 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[3833]"] WDR27--AL135910.1 3 2 3.00 1.00 INCL_NON_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169582836:- AL135910.1^ENSG00000272848.2 chr6:169433402:- YES_LDAS 0.0135 GT 1.6729 AG 1.8323 ["INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS[4737]"] AC005993.1--RGS6 3 2 3.00 0.59 ONLY_REF_SPLICE AC005993.1^ENSG00000266869.2 chr14:71908434:+ RGS6^ENSG00000182732.18 chr14:72352095:+ YES_LDAS 0.0121 GT 1.8892 AG 1.8323 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[3833]"] AC005993.1--RGS6 3 3 3.00 1.79 ONLY_REF_SPLICE AC005993.1^ENSG00000266869.2 chr14:71916030:+ RGS6^ENSG00000182732.18 chr14:72352095:+ YES_LDAS 0.0162 GT 1.6402 AG 1.8323 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[3833]"] YWHAEP7--MRPL45 2 0 2.00 0.00 ONLY_REF_SPLICE YWHAEP7^ENSG00000276715.4 chr17:37874204:- MRPL45^ENSG00000278845.5 chr17:38298449:+ YES_LDAS 0.0068 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr17:0.41Mb]"] WDR70--NACAD 2 0 1.00 0.00 INCL_NON_REF_SPLICE WDR70^ENSG00000082068.9 chr5:37396574:+ NACAD^ENSG00000136274.9 chr7:45085185:- NO_LDAS 0.0034 GT 1.2729 AG 0.9968 ["INTERCHROMOSOMAL[chr5--chr7]"] VPS16--LHX9 2 0 1.00 0.00 INCL_NON_REF_SPLICE VPS16^ENSG00000215305.10 chr20:2861678:+ LHX9^ENSG00000143355.16 chr1:197916022:+ NO_LDAS 0.0034 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr20--chr1]"] VAMP1--AC096588.1 2 0 2.00 0.00 ONLY_REF_SPLICE VAMP1^ENSG00000139190.17 chr12:6464890:- AC096588.1^ENSG00000249392.1 chr4:59551254:- NO_LDAS 0.0068 GT 1.5301 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr4]"] UTP25--TSPAN1 2 0 2.00 0.00 INCL_NON_REF_SPLICE UTP25^ENSG00000117597.18 chr1:209854579:+ TSPAN1^ENSG00000117472.10 chr1:46184594:+ NO_LDAS 0.0068 GC 1.8062 AG 1.2729 ["INTRACHROMOSOMAL[chr1:163.64Mb]"] UQCRB--TEX13B 2 0 2.00 0.00 INCL_NON_REF_SPLICE UQCRB^ENSG00000156467.10 chr8:96231793:- TEX13B^ENSG00000170925.3 chrX:107982153:- NO_LDAS 0.0068 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chrX]"] UBXN7--RNF168 2 0 2.00 0.00 ONLY_REF_SPLICE UBXN7^ENSG00000163960.12 chr3:196391813:- RNF168^ENSG00000163961.4 chr3:196483891:- YES_LDAS 0.0068 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.04Mb]","LOCAL_REARRANGEMENT:-:[36353]"] U62317.3--RMI1 2 0 2.00 0.00 ONLY_REF_SPLICE U62317.3^ENSG00000273272.2 chr22:50541456:+ RMI1^ENSG00000178966.17 chr9:83999709:+ NO_LDAS 0.0068 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr9]"] TYW1B--CALN1 2 0 1.00 0.00 ONLY_REF_SPLICE TYW1B^ENSG00000277149.5 chr7:72616672:- CALN1^ENSG00000183166.11 chr7:72403442:- YES_LDAS 0.0034 GT 1.6729 AG 1.9086 ["INTRACHROMOSOMAL[chr7:0.11Mb]"] TSC1--RABGAP1 2 0 0.40 0.00 ONLY_REF_SPLICE TSC1^ENSG00000165699.15 chr9:132944543:- RABGAP1^ENSG00000011454.18 chr9:122957011:+ NO_LDAS 0.0014 GT 1.3753 AG 1.5329 ["INTRACHROMOSOMAL[chr9:9.79Mb]"] TMEM141--NUDT16L2P 2 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM141^ENSG00000244187.8 chr9:136792358:+ NUDT16L2P^ENSG00000246082.2 chr3:131361917:+ NO_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr3]"] TMEM141--AC018445.3 2 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM141^ENSG00000244187.8 chr9:136792358:+ AC018445.3^ENSG00000279637.1 chr18:79421494:+ NO_LDAS 0.0034 GT 1.5058 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr18]"] TMCO2--HKDC1 2 0 2.00 0.00 ONLY_REF_SPLICE TMCO2^ENSG00000188800.6 chr1:40247448:+ HKDC1^ENSG00000156510.13 chr10:69232764:+ YES_LDAS 0.0068 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr10]"] TBC1D4--FAM76B 2 0 2.00 0.00 INCL_NON_REF_SPLICE TBC1D4^ENSG00000136111.14 chr13:75302239:- FAM76B^ENSG00000077458.13 chr11:95786626:- NO_LDAS 0.0068 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr11]"] TANGO2--PLIN4 2 0 2.00 0.00 INCL_NON_REF_SPLICE TANGO2^ENSG00000183597.16 chr22:20066771:+ PLIN4^ENSG00000167676.4 chr19:4513223:- NO_LDAS 0.0068 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr19]"] SYNJ2BP--TRMT11 2 0 2.00 0.00 INCL_NON_REF_SPLICE SYNJ2BP^ENSG00000213463.5 chr14:70372555:- TRMT11^ENSG00000066651.20 chr6:125986531:+ NO_LDAS 0.0068 GT 1.5058 AG 1.6402 ["INTERCHROMOSOMAL[chr14--chr6]"] SYCE1L--AC009139.1 2 0 2.00 0.00 ONLY_REF_SPLICE SYCE1L^ENSG00000205078.6 chr16:77212369:+ AC009139.1^ENSG00000260922.2 chr16:77289276:+ YES_LDAS 0.0068 GT 1.7232 AG 1.8323 ["INTRACHROMOSOMAL[chr16:0.02Mb]","NEIGHBORS[21662]"] STX5--NECAB1 2 0 2.00 0.00 INCL_NON_REF_SPLICE STX5^ENSG00000162236.13 chr11:62831112:- NECAB1^ENSG00000123119.12 chr8:90940762:+ NO_LDAS 0.0068 GT 1.2366 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr8]"] SRSF6--L3MBTL1 2 0 2.00 0.00 ONLY_REF_SPLICE SRSF6^ENSG00000124193.16 chr20:43460598:+ L3MBTL1^ENSG00000185513.17 chr20:43513476:+ YES_LDAS 0.0068 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr20:0.02Mb]","NEIGHBORS[23396]"] SNX11--CBX1 2 0 2.00 0.00 INCL_NON_REF_SPLICE SNX11^ENSG00000002919.15 chr17:48121565:+ CBX1^ENSG00000108468.15 chr17:48071579:- YES_LDAS 0.0068 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_INVERSION:+:-:[1879]"] SNORC--AL049872.1 2 0 0.40 0.00 INCL_NON_REF_SPLICE SNORC^ENSG00000182600.9 chr2:232870414:+ AL049872.1^ENSG00000259020.3 chr14:92026611:+ YES_LDAS 0.0014 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr2--chr14]"] SMURF2P1--AC005562.2 2 0 0.75 0.00 INCL_NON_REF_SPLICE SMURF2P1^ENSG00000248121.8 chr17:30610942:+ AC005562.2^ENSG00000273609.1 chr17:30617791:- YES_LDAS 0.0025 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_INVERSION:+:-:[1700]"] SMIM13--AL022098.1 2 0 2.00 0.00 ONLY_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ AL022098.1^ENSG00000287920.1 chr6:11295769:+ YES_LDAS 0.0068 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.15Mb]"] SMIM13--AL022098.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ AL022098.1^ENSG00000287920.1 chr6:11294979:+ YES_LDAS 0.0068 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.15Mb]"] SMAGP--POU6F1 2 0 2.00 0.00 ONLY_REF_SPLICE SMAGP^ENSG00000170545.17 chr12:51246751:- POU6F1^ENSG00000184271.17 chr12:51206883:- YES_LDAS 0.0068 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr12:0.03Mb]","NEIGHBORS[26850]"] RPL12P31--RPL12P35 2 0 1.00 0.00 INCL_NON_REF_SPLICE RPL12P31^ENSG00000241228.1 chr11:35997632:- RPL12P35^ENSG00000243007.1 chr15:72379652:- NO_LDAS 0.0034 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr15]"] RELL1--SET 2 0 1.00 0.00 ONLY_REF_SPLICE RELL1^ENSG00000181826.10 chr4:37686200:- SET^ENSG00000119335.17 chr9:128691170:+ YES_LDAS 0.0034 GT 1.5058 AG 1.2419 ["INTERCHROMOSOMAL[chr4--chr9]"] RBM39--PRSS23 2 0 2.00 0.00 INCL_NON_REF_SPLICE RBM39^ENSG00000131051.24 chr20:35729312:- PRSS23^ENSG00000150687.12 chr11:86937052:+ NO_LDAS 0.0068 GT 1.9329 AG 1.3753 ["INTERCHROMOSOMAL[chr20--chr11]"] RARS2--TLCD2 2 0 2.00 0.00 INCL_NON_REF_SPLICE RARS2^ENSG00000146282.18 chr6:87555408:- TLCD2^ENSG00000185561.10 chr17:1707163:- YES_LDAS 0.0068 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr6--chr17]"] PRELID2--AC137770.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE PRELID2^ENSG00000186314.11 chr5:145764931:- AC137770.1^ENSG00000250842.1 chr5:145381718:- YES_LDAS 0.0068 GT 1.5546 AG 1.7819 ["INTRACHROMOSOMAL[chr5:0.09Mb]","NEIGHBORS[90129]"] PHBP11--KLK5 2 0 2.00 0.00 INCL_NON_REF_SPLICE PHBP11^ENSG00000227621.1 chr1:223856813:- KLK5^ENSG00000167754.13 chr19:50952913:- NO_LDAS 0.0068 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr19]"] PAXX--ACTB 2 0 2.00 0.00 INCL_NON_REF_SPLICE PAXX^ENSG00000148362.11 chr9:136992566:+ ACTB^ENSG00000075624.17 chr7:5527252:- YES_LDAS 0.0068 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr7]"] OPN3--CD47 2 0 2.00 0.00 ONLY_REF_SPLICE OPN3^ENSG00000054277.14 chr1:241614043:- CD47^ENSG00000196776.17 chr3:108051970:- NO_LDAS 0.0068 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr3]"] NPM1P31--NPM1P4 2 0 2.00 0.00 INCL_NON_REF_SPLICE NPM1P31^ENSG00000214807.2 chr10:124867902:+ NPM1P4^ENSG00000226703.1 chr13:27696868:- NO_LDAS 0.0068 GT 1.2867 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr13]"] NOS1AP--ZNF793-AS1 2 0 2.00 0.00 INCL_NON_REF_SPLICE NOS1AP^ENSG00000198929.13 chr1:162070282:+ ZNF793-AS1^ENSG00000266916.7 chr19:37497358:- NO_LDAS 0.0068 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr19]"] NEDD8--SCN8A 2 0 2.00 0.00 INCL_NON_REF_SPLICE NEDD8^ENSG00000129559.13 chr14:24218133:- SCN8A^ENSG00000196876.18 chr12:51689982:+ NO_LDAS 0.0068 GT 1.9086 AG 1.5546 ["INTERCHROMOSOMAL[chr14--chr12]"] NDUFS5--NDUFS5P2 2 0 2.00 0.00 INCL_NON_REF_SPLICE NDUFS5^ENSG00000168653.11 chr1:39034556:+ NDUFS5P2^ENSG00000234226.5 chr1:96584461:- NO_LDAS 0.0068 GT 1.9899 AG 1.3710 ["INTRACHROMOSOMAL[chr1:57.55Mb]"] MRPS6--AP000317.1 2 0 2.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ AP000317.1^ENSG00000214955.5 chr21:34293681:+ YES_LDAS 0.0068 GT 1.8256 AG 1.9329 ["INTRACHROMOSOMAL[chr21:0.06Mb]","NEIGHBORS[62021]"] MRPS6--AP000317.1 2 0 2.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ AP000317.1^ENSG00000214955.5 chr21:34262820:+ YES_LDAS 0.0068 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr21:0.06Mb]","NEIGHBORS[62021]"] MAP3K14-AS1--AC106799.2 2 0 2.00 0.00 ONLY_REF_SPLICE MAP3K14-AS1^ENSG00000267278.6 chr17:45255218:+ AC106799.2^ENSG00000248973.3 chr5:4657565:- NO_LDAS 0.0068 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr5]"] LSP1P4--AC245060.4 2 0 2.00 0.00 ONLY_REF_SPLICE LSP1P4^ENSG00000143429.10 chr2:91659909:- AC245060.4^ENSG00000272779.1 chr22:22303224:+ YES_LDAS 0.0068 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr22]"] LINC02108--COA1 2 0 1.00 0.00 ONLY_REF_SPLICE LINC02108^ENSG00000250127.1 chr5:58547135:- COA1^ENSG00000106603.19 chr7:43650712:- NO_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr5--chr7]"] LINC02093--MOSPD1 2 0 2.00 0.00 ONLY_REF_SPLICE LINC02093^ENSG00000234634.2 chr17:13301119:- MOSPD1^ENSG00000101928.13 chrX:134891640:- YES_LDAS 0.0068 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chrX]"] LINC00592--ANKRD13C 2 0 2.00 0.00 ONLY_REF_SPLICE LINC00592^ENSG00000258279.4 chr12:52222943:+ ANKRD13C^ENSG00000118454.13 chr1:70324957:- NO_LDAS 0.0068 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr1]"] LINC00511--SLC39A11 2 0 2.00 0.00 ONLY_REF_SPLICE LINC00511^ENSG00000227036.8 chr17:72603103:- SLC39A11^ENSG00000133195.11 chr17:72649268:- YES_LDAS 0.0068 GT 1.6729 AG 1.9086 ["DEEPEST2019","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr17:0.01Mb]","LOCAL_REARRANGEMENT:-:[5477]"] KRT8P10--KRT6B 2 0 0.50 0.00 INCL_NON_REF_SPLICE KRT8P10^ENSG00000231203.1 chr2:183071891:- KRT6B^ENSG00000185479.6 chr12:52451583:- YES_LDAS 0.0017 GT 1.9219 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr12]"] KIF20B--DMGDH 2 0 2.00 0.00 INCL_NON_REF_SPLICE KIF20B^ENSG00000138182.15 chr10:89762835:+ DMGDH^ENSG00000132837.15 chr5:79021360:- NO_LDAS 0.0068 GT 1.4295 AG 1.6895 ["INTERCHROMOSOMAL[chr10--chr5]"] KCNMB2-AS1--GLDN 2 0 1.00 0.00 ONLY_REF_SPLICE KCNMB2-AS1^ENSG00000237978.6 chr3:178860294:- GLDN^ENSG00000186417.14 chr15:51377449:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr15]"] IARS1--AP002495.1 2 0 2.00 0.00 INCL_NON_REF_SPLICE IARS1^ENSG00000196305.18 chr9:92270992:- AP002495.1^ENSG00000254469.8 chr11:71865747:- NO_LDAS 0.0068 GC 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr11]"] HTR7--LINC02653 2 0 2.00 0.00 ONLY_REF_SPLICE HTR7^ENSG00000148680.16 chr10:90748839:- LINC02653^ENSG00000236373.2 chr10:90543450:- YES_LDAS 0.0068 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr10:0.11Mb]"] HNRNPKP3--CACNB2 2 0 2.00 0.00 INCL_NON_REF_SPLICE HNRNPKP3^ENSG00000251557.2 chr11:43261684:- CACNB2^ENSG00000165995.22 chr10:18541050:+ NO_LDAS 0.0068 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr10]"] HMGN2--CD4 2 0 2.00 0.00 INCL_NON_REF_SPLICE HMGN2^ENSG00000198830.11 chr1:26474135:+ CD4^ENSG00000010610.10 chr12:6815882:+ NO_LDAS 0.0068 GT 1.8256 AG 1.5628 ["INTERCHROMOSOMAL[chr1--chr12]"] HELLPAR--PARPBP 2 0 2.00 0.00 INCL_NON_REF_SPLICE HELLPAR^ENSG00000281344.1 chr12:102205157:+ PARPBP^ENSG00000185480.12 chr12:102153869:+ YES_LDAS 0.0068 GT 1.5301 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.00Mb]","LOCAL_REARRANGEMENT:+:[65]"] GPR135--L3HYPDH 2 0 2.00 0.00 ONLY_REF_SPLICE GPR135^ENSG00000181619.11 chr14:59456438:- L3HYPDH^ENSG00000126790.12 chr14:59479351:- YES_LDAS 0.0068 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[4979]"] GOLGA2P8--ZNF774 2 0 2.00 0.00 INCL_NON_REF_SPLICE GOLGA2P8^ENSG00000214433.4 chr15:90295226:+ ZNF774^ENSG00000196391.11 chr15:90354642:+ YES_LDAS 0.0068 GT 1.5329 AG 1.9899 ["INTRACHROMOSOMAL[chr15:0.06Mb]","NEIGHBORS[56601]"] GCOM1--MTRNR2L12 2 0 1.00 0.00 INCL_NON_REF_SPLICE GCOM1^ENSG00000137878.17 chr15:57637774:+ MTRNR2L12^ENSG00000269028.3 chr3:96617452:- NO_LDAS 0.0034 GT 1.8892 AG 1.2419 ["INTERCHROMOSOMAL[chr15--chr3]"] FUS--NTM 2 0 1.00 0.00 INCL_NON_REF_SPLICE FUS^ENSG00000089280.19 chr16:31184352:+ NTM^ENSG00000182667.14 chr11:131911603:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr11]"] FOXO1--LINC00598 2 0 2.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40474095:- YES_LDAS 0.0068 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FAM155B--EDA 2 0 2.00 0.00 ONLY_REF_SPLICE FAM155B^ENSG00000130054.5 chrX:69506143:+ EDA^ENSG00000158813.18 chrX:69957027:+ YES_LDAS 0.0068 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.08Mb]","NEIGHBORS[83559]"] DEF8--TCF3P1 2 0 2.00 0.00 INCL_NON_REF_SPLICE DEF8^ENSG00000140995.17 chr16:89957570:+ TCF3P1^ENSG00000236567.2 chr9:5112450:+ NO_LDAS 0.0068 GT 1.6895 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr9]"] DBNDD2--SYS1 2 0 2.00 0.00 INCL_NON_REF_SPLICE DBNDD2^ENSG00000244274.8 chr20:45410255:+ SYS1^ENSG00000204070.10 chr20:45366875:+ YES_LDAS 0.0068 GT 1.8256 AG 1.5850 ["INTRACHROMOSOMAL[chr20:0.03Mb]","LOCAL_REARRANGEMENT:+:[29259]"] CYP20A1--SPECC1 2 0 2.00 0.00 INCL_NON_REF_SPLICE CYP20A1^ENSG00000119004.16 chr2:203246921:+ SPECC1^ENSG00000128487.18 chr17:20315855:+ NO_LDAS 0.0068 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr17]"] CR382285.1--RPA1 2 0 2.00 0.00 ONLY_REF_SPLICE CR382285.1^ENSG00000270533.2 chr21:9992166:- RPA1^ENSG00000132383.12 chr17:1853101:+ YES_LDAS 0.0068 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr21--chr17]"] CNTNAP3C--BX005040.4 2 0 2.00 0.00 ONLY_REF_SPLICE CNTNAP3C^ENSG00000283378.1 chr9:61453030:+ BX005040.4^ENSG00000283541.1 chr9:61104578:- YES_LDAS 0.0068 GT 1.8295 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] CLVS1--PLS3 2 0 1.00 0.00 ONLY_REF_SPLICE CLVS1^ENSG00000177182.11 chr8:61465804:+ PLS3^ENSG00000102024.18 chrX:115610243:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chrX]"] CLN3--HMGB1P5 2 0 1.00 0.00 INCL_NON_REF_SPLICE CLN3^ENSG00000188603.22 chr16:28475958:- HMGB1P5^ENSG00000132967.9 chr3:22382350:+ NO_LDAS 0.0034 GC 1.6402 AG 1.6402 ["INTERCHROMOSOMAL[chr16--chr3]"] CLHC1--XRN1 2 0 2.00 0.00 ONLY_REF_SPLICE CLHC1^ENSG00000162994.16 chr2:55222235:- XRN1^ENSG00000114127.11 chr3:142335509:- NO_LDAS 0.0068 GT 1.5058 AG 1.5301 ["INTERCHROMOSOMAL[chr2--chr3]"] CLDN15--FIS1 2 0 2.00 0.00 ONLY_REF_SPLICE CLDN15^ENSG00000106404.14 chr7:101237365:- FIS1^ENSG00000214253.9 chr7:101240906:- YES_LDAS 0.0068 GT 1.5656 AG 1.9329 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:-:[638]"] CDKN1C--AC007967.4 2 0 2.00 0.00 INCL_NON_REF_SPLICE CDKN1C^ENSG00000129757.14 chr11:2885056:- AC007967.4^ENSG00000273731.1 chrY:8931269:- NO_LDAS 0.0068 GT 1.2729 AG 1.4566 ["INTERCHROMOSOMAL[chr11--chrY]"] C12orf65--THEM4 2 0 2.00 0.00 ONLY_REF_SPLICE C12orf65^ENSG00000130921.9 chr12:123248480:+ THEM4^ENSG00000159445.13 chr1:151895194:- NO_LDAS 0.0068 GT 1.8295 AG 1.7232 ["INTERCHROMOSOMAL[chr12--chr1]"] BX005040.4--CNTNAP3C 2 0 2.00 0.00 ONLY_REF_SPLICE BX005040.4^ENSG00000283541.1 chr9:61113783:- CNTNAP3C^ENSG00000283378.1 chr9:61425702:+ YES_LDAS 0.0068 GT 1.8256 AG 1.9899 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] BCKDHB--AL359715.1 2 0 2.00 0.00 ONLY_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.1^ENSG00000233967.7 chr6:80453157:+ YES_LDAS 0.0068 GT 1.9899 AG 1.7232 ["INTRACHROMOSOMAL[chr6:0.10Mb]","NEIGHBORS[95025]"] BCAP29--SLC26A4 2 0 2.00 0.00 ONLY_REF_SPLICE BCAP29^ENSG00000075790.12 chr7:107613432:+ SLC26A4^ENSG00000091137.14 chr7:107661639:+ YES_LDAS 0.0068 GT 1.9329 AG 1.9086 ["INTRACHROMOSOMAL[chr7:0.03Mb]","NEIGHBORS[31658]"] BBOX1-AS1--GLDN 2 0 1.00 0.00 ONLY_REF_SPLICE BBOX1-AS1^ENSG00000254560.6 chr11:27220047:- GLDN^ENSG00000186417.14 chr15:51377449:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr15]"] B4GALT4--IGSF11 2 0 2.00 0.00 ONLY_REF_SPLICE B4GALT4^ENSG00000121578.13 chr3:119216240:- IGSF11^ENSG00000144847.13 chr3:118930275:- YES_LDAS 0.0068 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.07Mb]","NEIGHBORS[65664]"] ATXN2--CSTF1 2 0 2.00 0.00 ONLY_REF_SPLICE ATXN2^ENSG00000204842.18 chr12:111597916:- CSTF1^ENSG00000101138.12 chr20:56397207:+ YES_LDAS 0.0068 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr20]"] ARMC4--AL355493.1 2 0 1.00 0.00 ONLY_REF_SPLICE ARMC4^ENSG00000169126.16 chr10:27961568:- AL355493.1^ENSG00000215409.4 chr10:27331566:- NO_LDAS 0.0034 GT 1.5058 AG 1.7968 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr10:0.43Mb]"] ARLNC1--CDYL2 2 0 2.00 0.00 ONLY_REF_SPLICE ARLNC1^ENSG00000260896.6 chr16:80840119:- CDYL2^ENSG00000166446.15 chr16:80685129:- YES_LDAS 0.0068 GT 1.7465 AG 1.5850 ["INTRACHROMOSOMAL[chr16:0.02Mb]","NEIGHBORS[21476]"] APBB3--TKFC 2 0 2.00 0.00 ONLY_REF_SPLICE APBB3^ENSG00000113108.20 chr5:140561018:- TKFC^ENSG00000149476.16 chr11:61342461:+ NO_LDAS 0.0068 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr11]"] AL670729.1--BEND6 2 0 2.00 0.00 INCL_NON_REF_SPLICE AL670729.1^ENSG00000270094.1 chr1:228395806:+ BEND6^ENSG00000151917.18 chr6:56992380:+ YES_LDAS 0.0068 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr6]"] AL445250.1--AC110079.1 2 0 2.00 0.00 ONLY_REF_SPLICE AL445250.1^ENSG00000225096.3 chr6:57961742:+ AC110079.1^ENSG00000260404.3 chr4:118595912:+ NO_LDAS 0.0068 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr4]"] AL358790.1--PLS3 2 0 1.00 0.00 ONLY_REF_SPLICE AL358790.1^ENSG00000282772.1 chr10:102851508:- PLS3^ENSG00000102024.18 chrX:115610243:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chrX]"] AKR1C1--AKR1E2 2 0 0.67 0.00 ONLY_REF_SPLICE AKR1C1^ENSG00000187134.14 chr10:4972749:+ AKR1E2^ENSG00000165568.18 chr10:4830675:+ NO_LDAS 0.0023 GT 1.7819 AG 1.9899 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr10:0.12Mb]"] AGBL5--ATRAID 2 0 2.00 0.00 INCL_NON_REF_SPLICE AGBL5^ENSG00000084693.16 chr2:27051950:+ ATRAID^ENSG00000138085.17 chr2:27215321:+ NO_LDAS 0.0068 GT 1.4256 AG 1.9899 ["INTRACHROMOSOMAL[chr2:0.14Mb]"] AF064860.2--IGSF5 2 0 2.00 0.00 ONLY_REF_SPLICE AF064860.2^ENSG00000231713.2 chr21:39727992:+ IGSF5^ENSG00000183067.5 chr21:39765535:+ YES_LDAS 0.0068 GT 1.7465 AG 1.7056 ["INTRACHROMOSOMAL[chr21:0.01Mb]","NEIGHBORS[14727]"] AC127502.3--AC135983.2 2 0 1.00 0.00 ONLY_REF_SPLICE AC127502.3^ENSG00000283345.1 chr15:30513698:+ AC135983.2^ENSG00000223509.8 chr15:32533368:- YES_LDAS 0.0034 GT 1.5329 AG 1.9656 ["INTRACHROMOSOMAL[chr15:2.01Mb]"] AC099654.11--AL627309.5 2 0 0.40 0.00 ONLY_REF_SPLICE AC099654.11^ENSG00000286436.1 chr7:57148471:+ AL627309.5^ENSG00000241860.7 chr1:173862:- NO_LDAS 0.0014 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr1]"] AC097500.1--FSIP2-AS1 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC097500.1^ENSG00000287129.1 chr2:185950644:- FSIP2-AS1^ENSG00000231646.6 chr2:185800148:- YES_LDAS 0.0068 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.15Mb]"] AC097493.3--AC107918.4 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC097493.3^ENSG00000284648.1 chr4:9532647:+ AC107918.4^ENSG00000284610.1 chr8:12015072:- YES_LDAS 0.0068 GT 1.4566 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr8]"] AC092032.3--PMS2CL 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC092032.3^ENSG00000288633.1 chr7:4996798:+ PMS2CL^ENSG00000187953.10 chr7:6731897:+ YES_LDAS 0.0068 GT 1.5546 AG 1.8892 ["INTRACHROMOSOMAL[chr7:1.71Mb]"] AC087280.2--DCHS1 2 0 2.00 0.00 ONLY_REF_SPLICE AC087280.2^ENSG00000283415.2 chr11:6924498:- DCHS1^ENSG00000166341.9 chr11:6641733:- NO_LDAS 0.0068 GT 1.6895 AG 1.8295 ["INTRACHROMOSOMAL[chr11:0.17Mb]"] AC079781.4--ENPP7P3 2 0 0.25 0.00 INCL_NON_REF_SPLICE AC079781.4^ENSG00000284627.1 chr7:97928082:- ENPP7P3^ENSG00000248618.1 chr3:130167943:- YES_LDAS 0.0008 GT 1.4566 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr3]"] AC026765.3--CBFA2T2 2 0 2.00 0.00 ONLY_REF_SPLICE AC026765.3^ENSG00000257817.2 chr12:114748210:+ CBFA2T2^ENSG00000078699.22 chr20:33640341:+ YES_LDAS 0.0068 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr20]"] AC025171.3--UBE2Q2P2 2 0 2.00 0.00 ONLY_REF_SPLICE AC025171.3^ENSG00000251131.2 chr5:43018672:+ UBE2Q2P2^ENSG00000259429.5 chr15:82419980:+ YES_LDAS 0.0068 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr15]"] AC021851.1--NUP35 2 0 2.00 0.00 ONLY_REF_SPLICE AC021851.1^ENSG00000272800.3 chr2:183182680:+ NUP35^ENSG00000163002.13 chr2:183151508:+ YES_LDAS 0.0068 GT 1.8062 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.02Mb]","LOCAL_REARRANGEMENT:+:[17126]"] AC015712.1--CERS5 2 0 2.00 0.00 ONLY_REF_SPLICE AC015712.1^ENSG00000232386.9 chr15:100855348:+ CERS5^ENSG00000139624.14 chr12:50130694:- NO_LDAS 0.0068 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr12]"] AC012313.4--ZNF584 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC012313.4^ENSG00000268543.1 chr19:58419327:+ ZNF584^ENSG00000171574.18 chr19:58415524:+ YES_LDAS 0.0068 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:+:[233]"] AC010974.2--GPR39 2 0 2.00 0.00 ONLY_REF_SPLICE AC010974.2^ENSG00000286068.1 chr2:132686465:+ GPR39^ENSG00000183840.7 chr2:132645101:+ YES_LDAS 0.0068 GT 1.9656 AG 1.7056 ["INTRACHROMOSOMAL[chr2:0.04Mb]","LOCAL_REARRANGEMENT:+:[38642]"] AC005357.2--CCNYL1 2 0 2.00 0.00 ONLY_REF_SPLICE AC005357.2^ENSG00000267623.3 chr19:27970524:+ CCNYL1^ENSG00000163249.13 chr2:207724800:+ NO_LDAS 0.0068 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr19--chr2]"] AC004923.1--ENPP7P7 2 0 2.00 0.00 INCL_NON_REF_SPLICE AC004923.1^ENSG00000254610.3 chr11:67955482:- ENPP7P7^ENSG00000273819.1 chr11:67812753:- YES_LDAS 0.0068 GT 1.4566 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr11:0.06Mb]","NEIGHBORS[61196]"] AC004784.1--CD177 2 0 2.00 0.00 ONLY_REF_SPLICE AC004784.1^ENSG00000282943.1 chr19:43101700:+ CD177^ENSG00000204936.10 chr19:43354207:+ YES_LDAS 0.0068 GT 1.8892 AG 1.8062 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr19:0.18Mb]"] SULT1A3--SLX1A 2 1 0.50 0.25 INCL_NON_REF_SPLICE SULT1A3^ENSG00000261052.6 chr16:30203988:+ SLX1A^ENSG00000132207.18 chr16:30194744:+ YES_LDAS 0.0025 GT 1.7968 AG 1.7819 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[1667]"] AC073529.1--MID1 2 1 2.00 0.17 ONLY_REF_SPLICE AC073529.1^ENSG00000234129.8 chrX:11038603:- MID1^ENSG00000101871.16 chrX:10567603:- YES_LDAS 0.0074 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","NEIGHBORS[13924]"] ZXDB--ERP44 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZXDB^ENSG00000198455.5 chrX:57593599:+ ERP44^ENSG00000023318.8 chr9:99979906:- YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr9]"] ZUP1--RSPH14 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZUP1^ENSG00000153975.10 chr6:116645860:- RSPH14^ENSG00000100218.12 chr22:23061868:- NO_LDAS 0.0034 GT 1.9219 AG 1.8062 ["INTERCHROMOSOMAL[chr6--chr22]"] ZSCAN9--HARS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZSCAN9^ENSG00000137185.13 chr6:28227057:+ HARS2^ENSG00000112855.17 chr5:140697989:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr5]"] ZNRD2--SLC50A1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNRD2^ENSG00000173465.8 chr11:65570970:+ SLC50A1^ENSG00000169241.19 chr1:155137561:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chr11--chr1]"] ZNF90P1--RINL 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF90P1^ENSG00000241738.1 chr3:101358777:+ RINL^ENSG00000187994.14 chr19:38871870:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr19]"] ZNF852--NTRK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF852^ENSG00000178917.17 chr3:44499894:- NTRK1^ENSG00000198400.13 chr1:156865615:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr1]"] ZNF852--NTRK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF852^ENSG00000178917.17 chr3:44499474:- NTRK1^ENSG00000198400.13 chr1:156865615:+ YES_LDAS 0.0034 GT 1.9219 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr1]"] ZNF814--GLB1L2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF814^ENSG00000204514.10 chr19:57859367:- GLB1L2^ENSG00000149328.15 chr11:134375713:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr11]"] ZNF775--AC073111.3 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF775^ENSG00000196456.13 chr7:150388501:+ AC073111.3^ENSG00000284691.1 chr7:150407584:+ NO_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[2072]"] ZNF75D--AC234771.4 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF75D^ENSG00000186376.15 chrX:135341768:- AC234771.4^ENSG00000236491.1 chrX:135193082:- YES_LDAS 0.0017 GT 1.8062 AG 1.9899 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chrX:0.05Mb]","NEIGHBORS[54241]"] ZNF749--AC095032.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF749^ENSG00000186230.7 chr19:57435667:+ AC095032.1^ENSG00000224613.7 chr1:103469370:- NO_LDAS 0.0034 GT 1.7056 AG 1.7232 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF720--AC098826.1 1 0 0.17 0.00 ONLY_REF_SPLICE ZNF720^ENSG00000197302.10 chr16:31723353:+ AC098826.1^ENSG00000225594.1 chr2:132087289:+ NO_LDAS 0.0006 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr2]"] ZNF708--ZNF766 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF708^ENSG00000182141.10 chr19:21329210:- ZNF766^ENSG00000196214.11 chr19:52283285:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8892 ["HGNC_GENEFAM","INTRACHROMOSOMAL[chr19:30.94Mb]"] ZNF700--PLEKHA1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF700^ENSG00000196757.8 chr19:11925273:+ PLEKHA1^ENSG00000107679.14 chr10:122393181:+ YES_LDAS 0.0034 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr10]"] ZNF668--GSDME 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF668^ENSG00000167394.13 chr16:31064122:- GSDME^ENSG00000105928.16 chr7:24705041:- YES_LDAS 0.0034 GT 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr16--chr7]"] ZNF665--FAM76A 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF665^ENSG00000197497.11 chr19:53191719:- FAM76A^ENSG00000009780.16 chr1:27732603:+ NO_LDAS 0.0034 GC 1.9329 AG 1.3710 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF653--ECSIT 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF653^ENSG00000161914.10 chr19:11505488:- ECSIT^ENSG00000130159.14 chr19:11514221:- YES_LDAS 0.0034 GT 1.4295 AG 1.4566 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:-:[90]"] ZNF644--LINC02609 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF644^ENSG00000122482.21 chr1:90937485:- LINC02609^ENSG00000233593.10 chr1:90789487:- YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.06Mb]","NEIGHBORS[63640]"] ZNF644--BARHL2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF644^ENSG00000122482.21 chr1:90937485:- BARHL2^ENSG00000143032.8 chr1:90714756:- YES_LDAS 0.0034 GT 1.9899 AG 1.2867 ["INTRACHROMOSOMAL[chr1:0.20Mb]"] ZNF627--LINC01844 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF627^ENSG00000198551.10 chr19:11616837:+ LINC01844^ENSG00000236714.3 chr5:142756797:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr5]"] ZNF613--ZNF684 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF613^ENSG00000176024.18 chr19:51944782:+ ZNF684^ENSG00000117010.17 chr1:40547341:+ NO_LDAS 0.0034 GT 1.9219 AG 1.7465 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr19--chr1]"] ZNF589--HEXD 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF589^ENSG00000164048.14 chr3:48247677:+ HEXD^ENSG00000169660.17 chr17:82428030:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr3--chr17]"] ZNF587B--ZNF154 1 0 0.33 0.00 ONLY_REF_SPLICE ZNF587B^ENSG00000269343.9 chr19:57839149:+ ZNF154^ENSG00000179909.15 chr19:57704979:- YES_LDAS 0.0011 GT 1.7819 AG 1.9329 ["DGD_PARALOGS","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr19:0.11Mb]"] ZNF587B--ZNF154 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF587B^ENSG00000269343.9 chr19:57840908:+ ZNF154^ENSG00000179909.15 chr19:57704979:- YES_LDAS 0.0034 GT 1.7465 AG 1.9329 ["DGD_PARALOGS","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr19:0.11Mb]"] ZNF577--CDC27 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF577^ENSG00000161551.14 chr19:51839893:- CDC27^ENSG00000004897.12 chr17:47132374:- YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr19--chr17]"] ZNF573--TBL2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF573^ENSG00000189144.15 chr19:37758476:- TBL2^ENSG00000106638.17 chr7:73571341:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr7]"] ZNF559--ZNF177 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF559^ENSG00000188321.14 chr19:9341184:+ ZNF177^ENSG00000188629.13 chr19:9364862:+ NO_LDAS 0.0034 GT 1.5301 AG 1.8062 ["ConjoinG","HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[11858]"] ZNF541--AC011005.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF541^ENSG00000118156.12 chr19:47532192:- AC011005.1^ENSG00000230626.4 chr7:129126662:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr19--chr7]"] ZNF525--SAXO2 1 0 0.25 0.00 INCL_NON_REF_SPLICE ZNF525^ENSG00000203326.12 chr19:53486758:+ SAXO2^ENSG00000188659.9 chr15:82283854:+ NO_LDAS 0.0008 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr15]"] ZNF525--SAXO2 1 0 0.25 0.00 INCL_NON_REF_SPLICE ZNF525^ENSG00000203326.12 chr19:53402191:+ SAXO2^ENSG00000188659.9 chr15:82283854:+ NO_LDAS 0.0008 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr15]"] ZNF525--SAXO2 1 0 0.25 0.00 INCL_NON_REF_SPLICE ZNF525^ENSG00000203326.12 chr19:53375896:+ SAXO2^ENSG00000188659.9 chr15:82283854:+ NO_LDAS 0.0008 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr15]"] ZNF519--FAM122C 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF519^ENSG00000175322.12 chr18:14124350:- FAM122C^ENSG00000156500.15 chrX:134845205:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr18--chrX]"] ZNF518B--EXOC8 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF518B^ENSG00000178163.8 chr4:10444020:- EXOC8^ENSG00000116903.7 chr1:231337836:- YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr1]"] ZNF500--LMAN1L 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF500^ENSG00000103199.14 chr16:4765565:- LMAN1L^ENSG00000140506.17 chr15:74818718:+ YES_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr15]"] ZNF484--AC025839.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF484^ENSG00000127081.14 chr9:92855811:- AC025839.1^ENSG00000287677.2 chr8:141659226:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr9--chr8]"] ZNF37A--AKR1E2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF37A^ENSG00000075407.18 chr10:38096632:+ AKR1E2^ENSG00000165568.18 chr10:4830675:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTRACHROMOSOMAL[chr10:33.25Mb]"] ZNF343--PRDM7 1 0 0.50 0.00 ONLY_REF_SPLICE ZNF343^ENSG00000088876.13 chr20:2492699:- PRDM7^ENSG00000126856.16 chr16:90058534:- NO_LDAS 0.0017 GT 1.7968 AG 1.4566 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr20--chr16]"] ZNF337--ZNF80 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF337^ENSG00000130684.14 chr20:25675979:- ZNF80^ENSG00000174255.8 chr3:114236849:- NO_LDAS 0.0034 GT 1.5301 AG 1.9899 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr20--chr3]"] ZNF331--MAP3K12 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF331^ENSG00000130844.19 chr19:53535861:+ MAP3K12^ENSG00000139625.13 chr12:53481379:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr12]"] ZNF280D--AC090517.5 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF280D^ENSG00000137871.21 chr15:56689041:- AC090517.5^ENSG00000285331.2 chr15:56847481:- NO_LDAS 0.0034 GT 1.6049 AG 1.3996 ["INTRACHROMOSOMAL[chr15:0.06Mb]","LOCAL_REARRANGEMENT:-:[61374]"] ZNF268--ZNF141 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF268^ENSG00000090612.22 chr12:133188072:+ ZNF141^ENSG00000131127.14 chr4:372664:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7232 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr12--chr4]"] ZNF257--PTCD2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF257^ENSG00000197134.13 chr19:22060628:+ PTCD2^ENSG00000049883.15 chr5:72335018:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr5]"] ZNF251--NLRP2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF251^ENSG00000198169.9 chr8:144755405:- NLRP2^ENSG00000022556.16 chr19:54994269:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr19]"] ZNF248--ZNF800 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF248^ENSG00000198105.16 chr10:37833025:- ZNF800^ENSG00000048405.10 chr7:127373479:- YES_LDAS 0.0034 GT 0.9183 AG 1.8062 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr10--chr7]"] ZNF248--C1QTNF12 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF248^ENSG00000198105.16 chr10:37858005:- C1QTNF12^ENSG00000184163.3 chr1:1244497:- NO_LDAS 0.0034 GT 1.2419 AG 1.7232 ["INTERCHROMOSOMAL[chr10--chr1]"] ZNF215--SDF2 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF215^ENSG00000149054.16 chr11:6955782:+ SDF2^ENSG00000132581.10 chr17:28655483:- NO_LDAS 0.0034 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr17]"] ZNF215--EPB41L4A-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF215^ENSG00000149054.16 chr11:6955782:+ EPB41L4A-AS1^ENSG00000224032.7 chr5:112161249:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chr5]"] ZNF175--SNIP1 1 0 1.00 0.00 ONLY_REF_SPLICE ZNF175^ENSG00000105497.8 chr19:51573401:+ SNIP1^ENSG00000163877.11 chr1:37540755:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr1]"] ZNF101--HBEGF 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZNF101^ENSG00000181896.12 chr19:19668972:+ HBEGF^ENSG00000113070.8 chr5:140346036:- NO_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr5]"] ZFYVE26--VIPAS39 1 0 1.00 0.00 ONLY_REF_SPLICE ZFYVE26^ENSG00000072121.17 chr14:67775860:- VIPAS39^ENSG00000151445.16 chr14:77457365:- YES_LDAS 0.0034 GT 1.7056 AG 1.9086 ["INTRACHROMOSOMAL[chr14:9.61Mb]"] ZFPM2-AS1--RIOK3 1 0 1.00 0.00 ONLY_REF_SPLICE ZFPM2-AS1^ENSG00000251003.9 chr8:106060381:- RIOK3^ENSG00000101782.15 chr18:23474948:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr8--chr18]"] ZFPM2-AS1--MRPS28 1 0 1.00 0.00 ONLY_REF_SPLICE ZFPM2-AS1^ENSG00000251003.9 chr8:106060381:- MRPS28^ENSG00000147586.10 chr8:79919148:- YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTRACHROMOSOMAL[chr8:25.52Mb]"] ZFP90--RNF168 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZFP90^ENSG00000184939.16 chr16:68558568:+ RNF168^ENSG00000163961.4 chr3:196503157:- YES_LDAS 0.0034 GT 1.9086 AG 1.6049 ["INTERCHROMOSOMAL[chr16--chr3]"] ZFP69B--ANKRD12 1 0 1.00 0.00 ONLY_REF_SPLICE ZFP69B^ENSG00000187801.15 chr1:40457071:+ ANKRD12^ENSG00000101745.17 chr18:9263790:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr18]"] ZFP30--MYL6B 1 0 1.00 0.00 ONLY_REF_SPLICE ZFP30^ENSG00000120784.16 chr19:37644610:- MYL6B^ENSG00000196465.10 chr12:56157468:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr12]"] ZFAND6--MTHFS 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND6^ENSG00000086666.19 chr15:80122800:+ MTHFS^ENSG00000136371.11 chr15:79845442:- YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.16Mb]"] ZFAND6--FNTA 1 0 1.00 0.00 ONLY_REF_SPLICE ZFAND6^ENSG00000086666.19 chr15:80122800:+ FNTA^ENSG00000168522.13 chr8:43064101:+ YES_LDAS 0.0034 GT 1.8323 AG 1.5301 ["INTERCHROMOSOMAL[chr15--chr8]"] ZDHHC17--NPIPB10P 1 0 0.06 0.00 ONLY_REF_SPLICE ZDHHC17^ENSG00000186908.15 chr12:76769201:+ NPIPB10P^ENSG00000196796.5 chr16:29050502:+ YES_LDAS 0.0002 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr16]"] ZDHHC14--PREP 1 0 1.00 0.00 ONLY_REF_SPLICE ZDHHC14^ENSG00000175048.17 chr6:157382266:+ PREP^ENSG00000085377.15 chr6:105288894:- YES_LDAS 0.0034 GT 1.7056 AG 1.7819 ["INTRACHROMOSOMAL[chr6:51.93Mb]"] ZCCHC17--MRPL19 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZCCHC17^ENSG00000121766.16 chr1:31346657:+ MRPL19^ENSG00000115364.14 chr2:75655064:+ NO_LDAS 0.0034 GC 1.2729 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr2]"] ZC3H8--IPPK 1 0 1.00 0.00 ONLY_REF_SPLICE ZC3H8^ENSG00000144161.13 chr2:112250191:- IPPK^ENSG00000127080.10 chr9:92619565:- NO_LDAS 0.0034 GT 1.3383 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr9]"] ZBTB8OS--CHRNA5 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB8OS^ENSG00000176261.15 chr1:32650433:- CHRNA5^ENSG00000169684.13 chr15:78593092:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5219 ["INTERCHROMOSOMAL[chr1--chr15]"] ZBTB8A--ARHGEF5 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB8A^ENSG00000160062.15 chr1:32605640:+ ARHGEF5^ENSG00000050327.15 chr7:144363625:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr7]"] ZBTB43--TSG101 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB43^ENSG00000169155.10 chr9:126805178:+ TSG101^ENSG00000074319.13 chr11:18506899:- YES_LDAS 0.0034 GT 1.2310 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chr11]"] ZBTB41--C4BPAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ZBTB41^ENSG00000177888.8 chr1:197172160:- C4BPAP1^ENSG00000224462.2 chr1:207178661:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr1:9.96Mb]"] ZBTB34--RALGPS1 1 0 1.00 0.00 ONLY_REF_SPLICE ZBTB34^ENSG00000177125.5 chr9:126860739:+ RALGPS1^ENSG00000136828.19 chr9:126962225:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.03Mb]","NEIGHBORS[28896]"] Z95114.1--GLUD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE Z95114.1^ENSG00000279217.1 chr22:36074848:+ GLUD2^ENSG00000182890.5 chrX:121047966:+ NO_LDAS 0.0034 GT 1.0530 AG 1.5058 ["INTERCHROMOSOMAL[chr22--chrX]"] YTHDC2--SRFBP1 1 0 1.00 0.00 ONLY_REF_SPLICE YTHDC2^ENSG00000047188.16 chr5:113515362:+ SRFBP1^ENSG00000151304.6 chr5:121974196:+ YES_LDAS 0.0034 GT 1.8295 AG 1.5656 ["INTRACHROMOSOMAL[chr5:8.37Mb]"] YARS2--YIPF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE YARS2^ENSG00000139131.13 chr12:32755144:- YIPF3^ENSG00000137207.12 chr6:43513165:- NO_LDAS 0.0034 AT 1.6402 AC 1.8256 ["INTERCHROMOSOMAL[chr12--chr6]"] XYLB--SLC22A14 1 0 1.00 0.00 ONLY_REF_SPLICE XYLB^ENSG00000093217.11 chr3:38348632:+ SLC22A14^ENSG00000144671.10 chr3:38306027:+ YES_LDAS 0.0034 GT 1.9219 AG 1.5329 ["INTRACHROMOSOMAL[chr3:0.03Mb]","LOCAL_REARRANGEMENT:+:[28185]"] XYLB--AC006019.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE XYLB^ENSG00000093217.11 chr3:38395563:+ AC006019.1^ENSG00000203335.5 chr7:154055672:- NO_LDAS 0.0017 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr7]"] WWOX--PAEP 1 0 1.00 0.00 ONLY_REF_SPLICE WWOX^ENSG00000186153.17 chr16:78164289:+ PAEP^ENSG00000122133.17 chr9:135566192:+ YES_LDAS 0.0034 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr9]"] WWOX--AC090771.2 1 0 1.00 0.00 ONLY_REF_SPLICE WWOX^ENSG00000186153.17 chr16:78164289:+ AC090771.2^ENSG00000267686.2 chr18:60132875:+ NO_LDAS 0.0034 GT 1.5656 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr18]"] WNT9A--CNN3 1 0 1.00 0.00 ONLY_REF_SPLICE WNT9A^ENSG00000143816.8 chr1:227924138:- CNN3^ENSG00000117519.16 chr1:94903524:- YES_LDAS 0.0034 GC 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr1:132.99Mb]"] WDSUB1--PCNX4 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDSUB1^ENSG00000196151.11 chr2:159236037:- PCNX4^ENSG00000126773.13 chr14:60114700:+ YES_LDAS 0.0034 GT 1.4566 AG 1.5301 ["INTERCHROMOSOMAL[chr2--chr14]"] WDR74--MUC19 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR74^ENSG00000133316.16 chr11:62833788:- MUC19^ENSG00000205592.15 chr12:40488012:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr12]"] WDR74--AP004290.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE WDR74^ENSG00000133316.16 chr11:62836023:- AP004290.1^ENSG00000236583.1 chr8:99233928:- NO_LDAS 0.0011 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr8]"] WDR74--AP000320.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE WDR74^ENSG00000133316.16 chr11:62836023:- AP000320.1^ENSG00000225555.2 chr21:34354198:- NO_LDAS 0.0011 GT 1.7465 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr21]"] WDR61--DHRS4 1 0 1.00 0.00 ONLY_REF_SPLICE WDR61^ENSG00000140395.9 chr15:78294946:- DHRS4^ENSG00000157326.19 chr14:23959902:+ YES_LDAS 0.0034 GT 1.6729 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr14]"] WDR49--AC106895.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE WDR49^ENSG00000174776.11 chr3:167554650:- AC106895.2^ENSG00000251216.2 chr4:173982968:- NO_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr4]"] WDR41--MOCS2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR41^ENSG00000164253.14 chr5:77449760:- MOCS2^ENSG00000164172.20 chr5:53107221:- NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr5:24.32Mb]"] WDR4--ZNF780B 1 0 1.00 0.00 ONLY_REF_SPLICE WDR4^ENSG00000160193.12 chr21:42873603:- ZNF780B^ENSG00000128000.17 chr19:40050377:- YES_LDAS 0.0034 GT 1.9329 AG 1.4566 ["INTERCHROMOSOMAL[chr21--chr19]"] WDR4--PKNOX1 1 0 1.00 0.00 ONLY_REF_SPLICE WDR4^ENSG00000160193.12 chr21:42850041:- PKNOX1^ENSG00000160199.15 chr21:43004326:+ NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr21:0.09Mb]","LOCAL_INVERSION:-:+:[94942]"] WDR4--CCNG2 1 0 1.00 0.00 ONLY_REF_SPLICE WDR4^ENSG00000160193.12 chr21:42850041:- CCNG2^ENSG00000138764.15 chr4:77158533:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5301 ["INTERCHROMOSOMAL[chr21--chr4]"] WDR20--PSEN1 1 0 1.00 0.00 ONLY_REF_SPLICE WDR20^ENSG00000140153.18 chr14:102140172:+ PSEN1^ENSG00000080815.19 chr14:73147795:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTRACHROMOSOMAL[chr14:28.92Mb]"] WDFY2--CDKN2B-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE WDFY2^ENSG00000139668.9 chr13:51584824:+ CDKN2B-AS1^ENSG00000240498.9 chr9:22012128:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTERCHROMOSOMAL[chr13--chr9]"] WBP1L--WBP1LP1 1 0 0.33 0.00 INCL_NON_REF_SPLICE WBP1L^ENSG00000166272.18 chr10:102812954:+ WBP1LP1^ENSG00000243661.1 chr7:142779140:- NO_LDAS 0.0011 GT 1.7232 AG 1.3996 ["INTERCHROMOSOMAL[chr10--chr7]"] WBP1L--NAA60 1 0 1.00 0.00 INCL_NON_REF_SPLICE WBP1L^ENSG00000166272.18 chr10:102814486:+ NAA60^ENSG00000122390.19 chr16:3476251:+ YES_LDAS 0.0034 GT 1.2729 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr16]"] WASHC2A--PKIB 1 0 0.13 0.00 ONLY_REF_SPLICE WASHC2A^ENSG00000099290.17 chr10:50080931:+ PKIB^ENSG00000135549.15 chr6:122482147:+ NO_LDAS 0.0004 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr6]"] WASHC2A--FOXN3 1 0 0.13 0.00 ONLY_REF_SPLICE WASHC2A^ENSG00000099290.17 chr10:50080931:+ FOXN3^ENSG00000053254.16 chr14:89333259:- NO_LDAS 0.0004 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr14]"] WASHC2A--AL590814.1 1 0 0.13 0.00 ONLY_REF_SPLICE WASHC2A^ENSG00000099290.17 chr10:50080931:+ AL590814.1^ENSG00000285961.1 chr6:92017127:- NO_LDAS 0.0004 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr6]"] WASH8P--HADH 1 0 1.00 0.00 ONLY_REF_SPLICE WASH8P^ENSG00000226210.3 chr12:26801:- HADH^ENSG00000138796.17 chr4:108009759:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr4]"] VWDE--FAM149B1 1 0 1.00 0.00 ONLY_REF_SPLICE VWDE^ENSG00000146530.14 chr7:12403659:- FAM149B1^ENSG00000138286.15 chr10:73228060:+ YES_LDAS 0.0034 GT 1.6049 AG 1.5656 ["INTERCHROMOSOMAL[chr7--chr10]"] VRK2--ZNF521 1 0 1.00 0.00 INCL_NON_REF_SPLICE VRK2^ENSG00000028116.18 chr2:58146423:+ ZNF521^ENSG00000198795.11 chr18:25225366:- NO_LDAS 0.0034 GT 1.8892 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr18]"] VRK2--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE VRK2^ENSG00000028116.18 chr2:58048967:+ PSMG3^ENSG00000157778.9 chr7:1569360:- YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr7]"] VPS45--PLEKHO1 1 0 1.00 0.00 ONLY_REF_SPLICE VPS45^ENSG00000136631.15 chr1:150110627:+ PLEKHO1^ENSG00000023902.14 chr1:150150912:+ YES_LDAS 0.0034 GT 1.4566 AG 1.8892 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr1:0.00Mb]","NEIGHBORS[3854]"] VPS37A--PLEKHA8 1 0 1.00 0.00 ONLY_REF_SPLICE VPS37A^ENSG00000155975.10 chr8:17298158:+ PLEKHA8^ENSG00000106086.20 chr7:30074071:+ NO_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr7]"] VPS33A--CYBRD1 1 0 1.00 0.00 ONLY_REF_SPLICE VPS33A^ENSG00000139719.11 chr12:122241009:- CYBRD1^ENSG00000071967.12 chr2:171553346:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5546 ["INTERCHROMOSOMAL[chr12--chr2]"] VPS29--BEGAIN 1 0 1.00 0.00 INCL_NON_REF_SPLICE VPS29^ENSG00000111237.19 chr12:110496150:- BEGAIN^ENSG00000183092.16 chr14:100538616:- YES_LDAS 0.0034 GC 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr14]"] VKORC1--HMOX2 1 0 1.00 0.00 ONLY_REF_SPLICE VKORC1^ENSG00000167397.15 chr16:31094557:- HMOX2^ENSG00000103415.12 chr16:4505484:+ YES_LDAS 0.0034 GT 1.6895 AG 1.5058 ["INTRACHROMOSOMAL[chr16:26.58Mb]"] VASP--PPM1N 1 0 1.00 0.00 ONLY_REF_SPLICE VASP^ENSG00000125753.14 chr19:45507776:+ PPM1N^ENSG00000213889.10 chr19:45488777:+ YES_LDAS 0.0034 GT 1.8256 AG 1.2366 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:+:[4069]"] VAMP8--VAMP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE VAMP8^ENSG00000118640.11 chr2:85581876:+ VAMP5^ENSG00000168899.5 chr2:85591725:+ YES_LDAS 0.0034 GT 1.9899 AG 1.7819 ["ConjoinG","HGNC_GENEFAM","INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS[2400]"] UXT--ATP5F1C 1 0 1.00 0.00 INCL_NON_REF_SPLICE UXT^ENSG00000126756.12 chrX:47657839:- ATP5F1C^ENSG00000165629.20 chr10:7806974:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chrX--chr10]"] UXT--AC025419.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE UXT^ENSG00000126756.12 chrX:47658826:- AC025419.1^ENSG00000250748.6 chr12:65556863:- NO_LDAS 0.0011 GT 1.8295 AG 1.5301 ["INTERCHROMOSOMAL[chrX--chr12]"] UTP20--CCDC66 1 0 1.00 0.00 ONLY_REF_SPLICE UTP20^ENSG00000120800.5 chr12:101312276:+ CCDC66^ENSG00000180376.17 chr3:56615922:+ YES_LDAS 0.0034 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr12--chr3]"] UTP18--LINC02073 1 0 1.00 0.00 ONLY_REF_SPLICE UTP18^ENSG00000011260.14 chr17:51285368:+ LINC02073^ENSG00000267452.3 chr17:51440233:+ YES_LDAS 0.0034 GT 1.5628 AG 1.8892 ["INTRACHROMOSOMAL[chr17:0.04Mb]","NEIGHBORS[38710]"] UTP11--INTS13 1 0 1.00 0.00 INCL_NON_REF_SPLICE UTP11^ENSG00000183520.12 chr1:38023715:+ INTS13^ENSG00000064102.15 chr12:26936612:- YES_LDAS 0.0034 GT 1.9656 AG 1.4295 ["INTERCHROMOSOMAL[chr1--chr12]"] UST--AL031056.1 1 0 1.00 0.00 ONLY_REF_SPLICE UST^ENSG00000111962.8 chr6:149021481:+ AL031056.1^ENSG00000228408.6 chr6:149243729:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTRACHROMOSOMAL[chr6:0.14Mb]"] USP5--HSD17B14 1 0 1.00 0.00 ONLY_REF_SPLICE USP5^ENSG00000111667.14 chr12:6852290:+ HSD17B14^ENSG00000087076.9 chr19:48815141:- YES_LDAS 0.0034 GT 1.8295 AG 1.3753 ["INTERCHROMOSOMAL[chr12--chr19]"] USP49--MED20 1 0 1.00 0.00 ONLY_REF_SPLICE USP49^ENSG00000164663.14 chr6:41798724:- MED20^ENSG00000124641.16 chr6:41907287:- YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr6:0.01Mb]","LOCAL_REARRANGEMENT:-:[9993]"] USP47--RAB19 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP47^ENSG00000170242.19 chr11:11842224:+ RAB19^ENSG00000146955.11 chr7:140427497:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr7]"] USP39--AL592146.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP39^ENSG00000168883.20 chr2:85619289:+ AL592146.2^ENSG00000286572.1 chr1:204073903:- NO_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr1]"] USP39--AL162291.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE USP39^ENSG00000168883.20 chr2:85616371:+ AL162291.1^ENSG00000263453.1 chr20:57895398:+ NO_LDAS 0.0034 GC 1.4295 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr20]"] USP38--INIP 1 0 1.00 0.00 ONLY_REF_SPLICE USP38^ENSG00000170185.10 chr4:143206226:+ INIP^ENSG00000148153.14 chr9:112694233:- YES_LDAS 0.0034 GT 1.9899 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr9]"] USP3-AS1--SNX5P2 1 0 0.50 0.00 INCL_NON_REF_SPLICE USP3-AS1^ENSG00000259248.7 chr15:63588829:- SNX5P2^ENSG00000258033.1 chr12:101066785:+ YES_LDAS 0.0017 GT 1.7968 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr12]"] USP3-AS1--OVOL2 1 0 0.50 0.00 ONLY_REF_SPLICE USP3-AS1^ENSG00000259248.7 chr15:63588829:- OVOL2^ENSG00000125850.11 chr20:17957037:- YES_LDAS 0.0017 GT 1.7968 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr20]"] USP1--DNTTIP2 1 0 1.00 0.00 ONLY_REF_SPLICE USP1^ENSG00000162607.13 chr1:62443319:+ DNTTIP2^ENSG00000067334.14 chr1:93873214:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr1:31.41Mb]"] UQCR11--NDRG2 1 0 1.00 0.00 ONLY_REF_SPLICE UQCR11^ENSG00000127540.12 chr19:1605360:- NDRG2^ENSG00000165795.23 chr14:21024096:- YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr14]"] UPK3B--DTX2 1 0 0.25 0.00 ONLY_REF_SPLICE UPK3B^ENSG00000243566.7 chr7:76511882:+ DTX2^ENSG00000091073.19 chr7:76492153:+ NO_LDAS 0.0008 GT 1.8295 AG 1.5546 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:+:[4530]"] UPK3B--AC004980.4 1 0 0.04 0.00 INCL_NON_REF_SPLICE UPK3B^ENSG00000243566.7 chr7:76511882:+ AC004980.4^ENSG00000250778.1 chr7:76521938:+ YES_LDAS 0.0001 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.01Mb]","NEIGHBORS[5089]"] UGDH-AS1--PIBF1 1 0 1.00 0.00 ONLY_REF_SPLICE UGDH-AS1^ENSG00000249348.1 chr4:39528338:+ PIBF1^ENSG00000083535.16 chr13:72998822:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr13]"] UCK1--COL4A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE UCK1^ENSG00000130717.13 chr9:131529488:- COL4A2^ENSG00000134871.19 chr13:110449738:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5219 ["INTERCHROMOSOMAL[chr9--chr13]"] UBIAD1--RN7SL863P 1 0 0.50 0.00 INCL_NON_REF_SPLICE UBIAD1^ENSG00000120942.14 chr1:11285822:+ RN7SL863P^ENSG00000244632.3 chr3:62796262:- NO_LDAS 0.0017 AT 1.5058 AC 1.9656 ["INTERCHROMOSOMAL[chr1--chr3]"] UBIAD1--RN7SL452P 1 0 0.50 0.00 INCL_NON_REF_SPLICE UBIAD1^ENSG00000120942.14 chr1:11285822:+ RN7SL452P^ENSG00000243103.3 chr14:50637831:- NO_LDAS 0.0017 AT 1.5058 AC 1.9656 ["INTERCHROMOSOMAL[chr1--chr14]"] UBFD1--NUDT21 1 0 1.00 0.00 ONLY_REF_SPLICE UBFD1^ENSG00000103353.16 chr16:23567069:+ NUDT21^ENSG00000167005.14 chr16:56434829:- YES_LDAS 0.0034 GT 1.9656 AG 1.5301 ["INTRACHROMOSOMAL[chr16:32.85Mb]"] UBFD1--ESCO1 1 0 1.00 0.00 ONLY_REF_SPLICE UBFD1^ENSG00000103353.16 chr16:23562730:+ ESCO1^ENSG00000141446.11 chr18:21568094:- NO_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr18]"] UBE2T--ABCC8 1 0 0.50 0.00 INCL_NON_REF_SPLICE UBE2T^ENSG00000077152.11 chr1:202335685:- ABCC8^ENSG00000006071.15 chr11:17407436:- NO_LDAS 0.0017 GT 1.7968 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr11]"] UBE2N--C1orf109 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2N^ENSG00000177889.10 chr12:93411053:- C1orf109^ENSG00000116922.14 chr1:37689883:- YES_LDAS 0.0034 GT 1.5219 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr1]"] UBE2L3--PI4KAP2 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2L3^ENSG00000185651.15 chr22:21567771:+ PI4KAP2^ENSG00000183506.17 chr22:21492094:- YES_LDAS 0.0034 GT 1.6895 AG 1.9656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr22:0.03Mb]","LOCAL_INVERSION:+:-:[31914]"] UBE2G2--TSPEAR 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2G2^ENSG00000184787.19 chr21:44787920:- TSPEAR^ENSG00000175894.18 chr21:44568005:- YES_LDAS 0.0034 GT 1.9329 AG 1.6402 ["INTRACHROMOSOMAL[chr21:0.06Mb]","NEIGHBORS[57008]"] UBE2F--SLC25A45 1 0 1.00 0.00 INCL_NON_REF_SPLICE UBE2F^ENSG00000184182.19 chr2:237987992:+ SLC25A45^ENSG00000162241.12 chr11:65376060:- YES_LDAS 0.0034 GT 1.7819 AG 1.5628 ["INTERCHROMOSOMAL[chr2--chr11]"] UBE2E2--TGFBR2 1 0 1.00 0.00 ONLY_REF_SPLICE UBE2E2^ENSG00000182247.10 chr3:23217312:+ TGFBR2^ENSG00000163513.19 chr3:30671638:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTRACHROMOSOMAL[chr3:7.01Mb]"] UBAP1--CCDC171 1 0 1.00 0.00 ONLY_REF_SPLICE UBAP1^ENSG00000165006.14 chr9:34179240:+ CCDC171^ENSG00000164989.17 chr9:15885690:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr9:18.12Mb]"] TYMS--SLC43A3 1 0 1.00 0.00 ONLY_REF_SPLICE TYMS^ENSG00000176890.16 chr18:662320:+ SLC43A3^ENSG00000134802.18 chr11:57410121:- YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr18--chr11]"] TYMS--SARNP 1 0 1.00 0.00 ONLY_REF_SPLICE TYMS^ENSG00000176890.16 chr18:662320:+ SARNP^ENSG00000205323.9 chr12:55752840:- YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr18--chr12]"] TXNRD3--ABHD15 1 0 1.00 0.00 INCL_NON_REF_SPLICE TXNRD3^ENSG00000197763.20 chr3:126633960:- ABHD15^ENSG00000168792.5 chr17:29562367:- YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr17]"] TXNL1--ATP9B 1 0 1.00 0.00 ONLY_REF_SPLICE TXNL1^ENSG00000091164.13 chr18:56638343:- ATP9B^ENSG00000166377.20 chr18:79277054:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTRACHROMOSOMAL[chr18:22.42Mb]"] TXNDC15--PCBD2 1 0 1.00 0.00 ONLY_REF_SPLICE TXNDC15^ENSG00000113621.15 chr5:134874530:+ PCBD2^ENSG00000132570.15 chr5:134959040:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7968 ["INTRACHROMOSOMAL[chr5:0.00Mb]","NEIGHBORS[3485]"] TXLNG--F2RL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TXLNG^ENSG00000086712.13 chrX:16793786:+ F2RL2^ENSG00000164220.7 chr5:76617277:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr5]"] TUBD1--TMTC2 1 0 1.00 0.00 ONLY_REF_SPLICE TUBD1^ENSG00000108423.15 chr17:59886083:- TMTC2^ENSG00000179104.9 chr12:83132210:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr12]"] TTLL5--DSCR8 1 0 1.00 0.00 ONLY_REF_SPLICE TTLL5^ENSG00000119685.20 chr14:75669522:+ DSCR8^ENSG00000198054.12 chr21:38154433:+ NO_LDAS 0.0034 GT 1.5850 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr21]"] TTC23L--LMBRD2 1 0 1.00 0.00 ONLY_REF_SPLICE TTC23L^ENSG00000205838.14 chr5:34880308:+ LMBRD2^ENSG00000164187.7 chr5:36122961:- YES_LDAS 0.0034 GT 1.4716 AG 1.9899 ["INTRACHROMOSOMAL[chr5:1.20Mb]"] TTC21B--GALNT3 1 0 1.00 0.00 ONLY_REF_SPLICE TTC21B^ENSG00000123607.16 chr2:165912514:- GALNT3^ENSG00000115339.14 chr2:165755063:- NO_LDAS 0.0034 GT 1.8062 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.06Mb]","NEIGHBORS[62816]"] TTC12--LINC02495 1 0 1.00 0.00 INCL_NON_REF_SPLICE TTC12^ENSG00000149292.17 chr11:113341911:+ LINC02495^ENSG00000249896.2 chr4:6222671:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr11--chr4]"] TSTD2--TGFBR1 1 0 1.00 0.00 ONLY_REF_SPLICE TSTD2^ENSG00000136925.15 chr9:97617757:- TGFBR1^ENSG00000106799.13 chr9:99128855:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr9:1.47Mb]"] TSLP--ZNF333 1 0 1.00 0.00 INCL_NON_REF_SPLICE TSLP^ENSG00000145777.15 chr5:111071852:+ ZNF333^ENSG00000160961.12 chr19:14715424:+ NO_LDAS 0.0034 GT 1.8295 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr19]"] TSKU--ADSS1 1 0 1.00 0.00 ONLY_REF_SPLICE TSKU^ENSG00000182704.8 chr11:76783404:+ ADSS1^ENSG00000185100.11 chr14:104735020:+ NO_LDAS 0.0034 GT 1.8323 AG 1.5656 ["INTERCHROMOSOMAL[chr11--chr14]"] TSKU--ACER3 1 0 1.00 0.00 ONLY_REF_SPLICE TSKU^ENSG00000182704.8 chr11:76783404:+ ACER3^ENSG00000078124.13 chr11:76926557:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7819 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.06Mb]","NEIGHBORS[62706]"] TRPM4--VN1R28P 1 0 0.50 0.00 INCL_NON_REF_SPLICE TRPM4^ENSG00000130529.16 chr19:49189062:+ VN1R28P^ENSG00000227182.1 chr7:57423686:- NO_LDAS 0.0017 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr19--chr7]"] TROAP--PBXIP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TROAP^ENSG00000135451.13 chr12:49329454:+ PBXIP1^ENSG00000163346.17 chr1:154945978:- NO_LDAS 0.0034 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr1]"] TRMT12--ZHX1 1 0 1.00 0.00 ONLY_REF_SPLICE TRMT12^ENSG00000183665.5 chr8:124451257:+ ZHX1^ENSG00000165156.15 chr8:123267386:- YES_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr8:1.18Mb]"] TRMT11--GPR161 1 0 1.00 0.00 ONLY_REF_SPLICE TRMT11^ENSG00000066651.20 chr6:126040845:+ GPR161^ENSG00000143147.14 chr1:168097232:- NO_LDAS 0.0034 GT 1.6895 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr1]"] TRMT11--CENPW 1 0 1.00 0.00 ONLY_REF_SPLICE TRMT11^ENSG00000066651.20 chr6:126174911:+ CENPW^ENSG00000203760.9 chr6:126346205:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr6:0.14Mb]"] TRIM74--STAG3L1 1 0 0.50 0.00 ONLY_REF_SPLICE TRIM74^ENSG00000155428.12 chr7:72961350:- STAG3L1^ENSG00000205583.13 chr7:75385083:+ NO_LDAS 0.0017 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr7:2.39Mb]"] TRIM67-AS1--FAM89A 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM67-AS1^ENSG00000235710.6 chr1:231186076:- FAM89A^ENSG00000182118.8 chr1:231020126:- YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTRACHROMOSOMAL[chr1:0.14Mb]"] TRIM6--ACER3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRIM6^ENSG00000121236.21 chr11:5603735:+ ACER3^ENSG00000078124.13 chr11:77010862:+ NO_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr11:71.25Mb]"] TRIM55--AC084082.1 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM55^ENSG00000147573.17 chr8:66127436:+ AC084082.1^ENSG00000253190.4 chr8:66126546:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.00Mb]","LOCAL_REARRANGEMENT:+:[264]"] TRIM52--RALGAPA2 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- RALGAPA2^ENSG00000188559.15 chr20:20640878:- NO_LDAS 0.0034 GT 1.8892 AG 1.5058 ["INTERCHROMOSOMAL[chr5--chr20]"] TRIM52--IMMP2L 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- IMMP2L^ENSG00000184903.10 chr7:111561923:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr7]"] TRIM52--AC240565.1 1 0 0.14 0.00 ONLY_REF_SPLICE TRIM52^ENSG00000183718.5 chr5:181260001:- AC240565.1^ENSG00000280136.2 chr17:101174:- YES_LDAS 0.0005 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr17]"] TRIM4--ZSCAN21 1 0 1.00 0.00 ONLY_REF_SPLICE TRIM4^ENSG00000146833.16 chr7:99919009:- ZSCAN21^ENSG00000166529.15 chr7:100063788:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr7:0.13Mb]"] TRAM2--BLMH 1 0 1.00 0.00 ONLY_REF_SPLICE TRAM2^ENSG00000065308.5 chr6:52576796:- BLMH^ENSG00000108578.15 chr17:30289482:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr17]"] TRAK2--TRUB1 1 0 1.00 0.00 ONLY_REF_SPLICE TRAK2^ENSG00000115993.13 chr2:201407403:- TRUB1^ENSG00000165832.6 chr10:114959726:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr10]"] TRAK2--GPX8 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAK2^ENSG00000115993.13 chr2:201394798:- GPX8^ENSG00000164294.14 chr5:55166238:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr5]"] TRAFD1--FAAH 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAFD1^ENSG00000135148.12 chr12:112141202:+ FAAH^ENSG00000117480.16 chr1:46411612:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr1]"] TRAF3IP1--SPN 1 0 1.00 0.00 INCL_NON_REF_SPLICE TRAF3IP1^ENSG00000204104.12 chr2:238399239:+ SPN^ENSG00000197471.12 chr16:29668635:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr16]"] TPTEP2--FIRRE 1 0 1.00 0.00 ONLY_REF_SPLICE TPTEP2^ENSG00000244627.5 chr22:38380370:- FIRRE^ENSG00000213468.7 chrX:131794466:- YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr22--chrX]"] TPST2--CRYBB2 1 0 1.00 0.00 ONLY_REF_SPLICE TPST2^ENSG00000128294.16 chr22:26590053:- CRYBB2^ENSG00000244752.3 chr22:25221404:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr22:1.29Mb]"] TPGS2--CACNB1 1 0 1.00 0.00 ONLY_REF_SPLICE TPGS2^ENSG00000134779.15 chr18:36828683:- CACNB1^ENSG00000067191.16 chr17:39175657:- YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr18--chr17]"] TP73--GABRD 1 0 1.00 0.00 ONLY_REF_SPLICE TP73^ENSG00000078900.15 chr1:3683180:+ GABRD^ENSG00000187730.9 chr1:2027577:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTRACHROMOSOMAL[chr1:1.62Mb]"] TOX3--SVIL 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOX3^ENSG00000103460.17 chr16:52547035:- SVIL^ENSG00000197321.15 chr10:29533393:- NO_LDAS 0.0034 GC 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr10]"] TOPBP1--SRPRB 1 0 1.00 0.00 ONLY_REF_SPLICE TOPBP1^ENSG00000163781.14 chr3:133612389:- SRPRB^ENSG00000144867.13 chr3:133825392:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.12Mb]"] TOMM70--GBE1 1 0 1.00 0.00 ONLY_REF_SPLICE TOMM70^ENSG00000154174.8 chr3:100372606:- GBE1^ENSG00000114480.13 chr3:81537095:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr3:18.60Mb]"] TOMM7--STEAP1B 1 0 1.00 0.00 ONLY_REF_SPLICE TOMM7^ENSG00000196683.11 chr7:22818000:- STEAP1B^ENSG00000105889.16 chr7:22632922:- YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.09Mb]","NEIGHBORS[85015]"] TOMM22--AC116533.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOMM22^ENSG00000100216.6 chr22:38682095:+ AC116533.1^ENSG00000244398.1 chr11:16974836:- YES_LDAS 0.0034 GT 1.6895 AG 1.7232 ["INTERCHROMOSOMAL[chr22--chr11]"] TOM1--TP63 1 0 1.00 0.00 INCL_NON_REF_SPLICE TOM1^ENSG00000100284.22 chr22:35323177:+ TP63^ENSG00000073282.14 chr3:189868588:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr3]"] TNNI3K--FPGT 1 0 1.00 0.00 ONLY_REF_SPLICE TNNI3K^ENSG00000116783.15 chr1:74370392:+ FPGT^ENSG00000254685.7 chr1:74204391:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9899 ["ConjoinG","INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[1301]"] TNIK--EIF5A2 1 0 1.00 0.00 ONLY_REF_SPLICE TNIK^ENSG00000154310.17 chr3:171460007:- EIF5A2^ENSG00000163577.8 chr3:170894423:- YES_LDAS 0.0034 GT 1.8256 AG 1.9086 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.15Mb]"] TMTC4--UIMC1 1 0 1.00 0.00 ONLY_REF_SPLICE TMTC4^ENSG00000125247.16 chr13:100670360:- UIMC1^ENSG00000087206.17 chr5:176958154:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr5]"] TMEM79--IGFN1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM79^ENSG00000163472.19 chr1:156286473:+ IGFN1^ENSG00000163395.17 chr1:201201719:+ YES_LDAS 0.0034 GT 1.5058 AG 1.5219 ["INTRACHROMOSOMAL[chr1:44.90Mb]"] TMEM70--ASAH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM70^ENSG00000175606.11 chr8:73976445:+ ASAH1^ENSG00000104763.20 chr8:18084008:- YES_LDAS 0.0034 GC 1.7232 AG 1.7819 ["INTRACHROMOSOMAL[chr8:55.89Mb]"] TMEM63C--NTN5 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM63C^ENSG00000165548.11 chr14:77116842:+ NTN5^ENSG00000142233.14 chr19:48664767:- YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr19]"] TMEM59--FHAD1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM59^ENSG00000116209.12 chr1:54053000:- FHAD1^ENSG00000142621.19 chr1:15308613:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr1:38.63Mb]"] TMEM39A--RSU1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM39A^ENSG00000176142.13 chr3:119463402:- RSU1^ENSG00000148484.18 chr10:16817404:- YES_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr10]"] TMEM38B--FSD1L 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM38B^ENSG00000095209.12 chr9:105694772:+ FSD1L^ENSG00000106701.13 chr9:105506399:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTRACHROMOSOMAL[chr9:0.14Mb]"] TMEM266--HMG20A 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM266^ENSG00000169758.13 chr15:76175674:+ HMG20A^ENSG00000140382.15 chr15:77458404:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr15:1.19Mb]"] TMEM248--PHLPP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM248^ENSG00000106609.16 chr7:66948698:+ PHLPP2^ENSG00000040199.18 chr16:71678377:- NO_LDAS 0.0034 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr7--chr16]"] TMEM248--AC002351.1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM248^ENSG00000106609.16 chr7:66953369:+ AC002351.1^ENSG00000258240.6 chr12:110956336:- NO_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr12]"] TMEM241--BMF 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM241^ENSG00000134490.14 chr18:23377646:- BMF^ENSG00000104081.14 chr15:40108051:- NO_LDAS 0.0034 GT 1.9329 AG 1.1589 ["INTERCHROMOSOMAL[chr18--chr15]"] TMEM221--DPP8 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM221^ENSG00000188051.7 chr19:17436697:- DPP8^ENSG00000074603.19 chr15:65517144:- NO_LDAS 0.0034 GT 1.8892 AG 1.5628 ["INTERCHROMOSOMAL[chr19--chr15]"] TMEM201--EMG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM201^ENSG00000188807.13 chr1:9596010:+ EMG1^ENSG00000126749.16 chr12:6978321:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr12]"] TMEM200B--DMBX1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM200B^ENSG00000253304.2 chr1:29123856:- DMBX1^ENSG00000197587.11 chr1:46506999:+ YES_LDAS 0.0034 GT 1.5628 AG 1.8323 ["INTRACHROMOSOMAL[chr1:17.37Mb]"] TMEM191A--ATP5F1E 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM191A^ENSG00000226287.8 chr22:20703122:+ ATP5F1E^ENSG00000124172.10 chr20:59030429:- YES_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr22--chr20]"] TMEM184C--PRIM2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM184C^ENSG00000164168.8 chr4:147631505:+ PRIM2^ENSG00000146143.19 chr6:57507387:+ NO_LDAS 0.0034 GT 0.9056 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr6]"] TMEM177--ESR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM177^ENSG00000144120.13 chr2:119685754:+ ESR2^ENSG00000140009.19 chr14:64230011:- NO_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr14]"] TMEM167A--TRAPPC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM167A^ENSG00000174695.10 chr5:83057135:- TRAPPC3^ENSG00000054116.12 chr1:36156016:- NO_LDAS 0.0034 GT 1.9899 AG 1.1589 ["INTERCHROMOSOMAL[chr5--chr1]"] TMEM165--MMAB 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM165^ENSG00000134851.13 chr4:55396396:+ MMAB^ENSG00000139428.12 chr12:109561852:- YES_LDAS 0.0034 GT 1.5628 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr12]"] TMEM164--AMMECR1 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM164^ENSG00000157600.12 chrX:110144876:+ AMMECR1^ENSG00000101935.11 chrX:110216632:- NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","LOCAL_INVERSION:+:-:[11452]"] TMEM161B--PGBD2 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM161B^ENSG00000164180.14 chr5:88196376:- PGBD2^ENSG00000185220.12 chr1:248917279:+ YES_LDAS 0.0034 GT 1.2729 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr1]"] TMEM14C--JAZF1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM14C^ENSG00000111843.14 chr6:10728727:+ JAZF1-AS1^ENSG00000234336.7 chr7:28242607:+ YES_LDAS 0.0034 GT 1.9656 AG 1.4716 ["INTERCHROMOSOMAL[chr6--chr7]"] TMEM147-AS1--SBSN 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM147-AS1^ENSG00000236144.8 chr19:35541751:- SBSN^ENSG00000189001.11 chr19:35524924:- YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTRACHROMOSOMAL[chr19:0.01Mb]","NEIGHBORS[12387]"] TMEM135--ALG9 1 0 1.00 0.00 ONLY_REF_SPLICE TMEM135^ENSG00000166575.17 chr11:87071615:+ ALG9^ENSG00000086848.15 chr11:111786520:- YES_LDAS 0.0034 GT 1.4716 AG 1.9329 ["INTRACHROMOSOMAL[chr11:24.45Mb]"] TMEM106C--LINC00607 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMEM106C^ENSG00000134291.12 chr12:47964423:+ LINC00607^ENSG00000235770.6 chr2:215701084:- NO_LDAS 0.0034 GT 1.9086 AG 1.2867 ["INTERCHROMOSOMAL[chr12--chr2]"] TMED9--MEF2C-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TMED9^ENSG00000184840.12 chr5:177592654:+ MEF2C-AS1^ENSG00000248309.7 chr5:89075122:+ NO_LDAS 0.0034 GT 1.6895 AG 1.7819 ["INTRACHROMOSOMAL[chr5:88.13Mb]"] TMED3--MINAR1 1 0 1.00 0.00 ONLY_REF_SPLICE TMED3^ENSG00000166557.14 chr15:79314005:+ MINAR1^ENSG00000169330.9 chr15:79463067:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8256 ["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS[4904]"] TMC5--GSDMB 1 0 1.00 0.00 ONLY_REF_SPLICE TMC5^ENSG00000103534.17 chr16:19460334:+ GSDMB^ENSG00000073605.18 chr17:39912497:- YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr17]"] TIMM23B--AGAP12P 1 0 1.00 0.00 INCL_NON_REF_SPLICE TIMM23B^ENSG00000204152.14 chr10:49958480:+ AGAP12P^ENSG00000265018.6 chr10:48033165:- YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTRACHROMOSOMAL[chr10:1.91Mb]"] TICAM2--OR10K1 1 0 0.50 0.00 INCL_NON_REF_SPLICE TICAM2^ENSG00000243414.6 chr5:115580662:- OR10K1^ENSG00000173285.4 chr1:158467313:+ NO_LDAS 0.0017 GT 1.7968 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr1]"] TIA1--STAMBP 1 0 1.00 0.00 ONLY_REF_SPLICE TIA1^ENSG00000116001.17 chr2:70214349:- STAMBP^ENSG00000124356.16 chr2:73844813:+ NO_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr2:3.58Mb]"] THUMPD3-AS1--TM7SF3 1 0 1.00 0.00 ONLY_REF_SPLICE THUMPD3-AS1^ENSG00000206573.9 chr3:9390290:- TM7SF3^ENSG00000064115.11 chr12:26999676:- YES_LDAS 0.0034 GT 1.9329 AG 1.5219 ["INTERCHROMOSOMAL[chr3--chr12]"] THUMPD3--PARPBP 1 0 1.00 0.00 INCL_NON_REF_SPLICE THUMPD3^ENSG00000134077.16 chr3:9365072:+ PARPBP^ENSG00000185480.12 chr12:102151831:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr3--chr12]"] THBS1--ORC5 1 0 1.00 0.00 INCL_NON_REF_SPLICE THBS1^ENSG00000137801.11 chr15:39593596:+ ORC5^ENSG00000164815.11 chr7:104136880:- YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr7]"] TGFBR1--TEX13B 1 0 1.00 0.00 INCL_NON_REF_SPLICE TGFBR1^ENSG00000106799.13 chr9:99147779:+ TEX13B^ENSG00000170925.3 chrX:107982153:- NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTERCHROMOSOMAL[chr9--chrX]"] TGFB2--LYSMD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TGFB2^ENSG00000092969.12 chr1:218345713:+ LYSMD1^ENSG00000163155.12 chr1:151165206:- NO_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTRACHROMOSOMAL[chr1:67.18Mb]"] TESK2--ZSWIM5 1 0 1.00 0.00 ONLY_REF_SPLICE TESK2^ENSG00000070759.17 chr1:45355303:- ZSWIM5^ENSG00000162415.7 chr1:45060247:- YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTRACHROMOSOMAL[chr1:0.04Mb]","NEIGHBORS[37674]"] TERT--KATNBL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TERT^ENSG00000164362.21 chr5:1258598:- KATNBL1^ENSG00000134152.11 chr15:34209992:- NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr15]"] TERF2IP--PAQR6 1 0 1.00 0.00 INCL_NON_REF_SPLICE TERF2IP^ENSG00000166848.7 chr16:75733610:+ PAQR6^ENSG00000160781.17 chr1:156246756:- NO_LDAS 0.0034 GT 1.5329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr1]"] TEPSIN--C13orf46 1 0 1.00 0.00 ONLY_REF_SPLICE TEPSIN^ENSG00000167302.11 chr17:81238986:- C13orf46^ENSG00000283199.3 chr13:113970222:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr13]"] TDRKH--VSX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE TDRKH^ENSG00000182134.16 chr1:151775392:- VSX2^ENSG00000119614.3 chr14:74262619:+ NO_LDAS 0.0034 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr14]"] TDRD5--AXDND1 1 0 1.00 0.00 ONLY_REF_SPLICE TDRD5^ENSG00000162782.16 chr1:179669404:+ AXDND1^ENSG00000162779.22 chr1:179525334:+ YES_LDAS 0.0034 GT 1.8256 AG 1.6895 ["INTRACHROMOSOMAL[chr1:0.04Mb]","LOCAL_REARRANGEMENT:+:[36878]"] TDRD3--MYOZ3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TDRD3^ENSG00000083544.16 chr13:60535237:+ MYOZ3^ENSG00000164591.14 chr5:150672110:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr13--chr5]"] TBRG1--SREK1IP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBRG1^ENSG00000154144.13 chr11:124632303:+ SREK1IP1^ENSG00000153006.16 chr5:64768640:- NO_LDAS 0.0034 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr5]"] TBP--GNAI3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBP^ENSG00000112592.14 chr6:170571504:+ GNAI3^ENSG00000065135.12 chr1:109592498:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr6--chr1]"] TBCEL--TECTA 1 0 1.00 0.00 ONLY_REF_SPLICE TBCEL^ENSG00000154114.12 chr11:121060085:+ TECTA^ENSG00000109927.11 chr11:121102665:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[10468]"] TBCE--GGPS1 1 0 1.00 0.00 ONLY_REF_SPLICE TBCE^ENSG00000284770.2 chr1:235401587:+ GGPS1^ENSG00000152904.11 chr1:235335242:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["DEEPEST2019","TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr1:0.02Mb]","LOCAL_REARRANGEMENT:+:[22828]"] TBC1D4--AC011933.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE TBC1D4^ENSG00000136111.14 chr13:75362071:- AC011933.1^ENSG00000228007.1 chr17:75339060:+ YES_LDAS 0.0011 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr17]"] TBC1D31--AC063926.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBC1D31^ENSG00000156787.17 chr8:123077257:+ AC063926.3^ENSG00000279905.1 chr12:130430652:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr12]"] TBC1D30--INPP4B 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D30^ENSG00000111490.15 chr12:64843485:+ INPP4B^ENSG00000109452.12 chr4:142405324:- YES_LDAS 0.0034 GT 1.9656 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr4]"] TBC1D2--GSTT2 1 0 0.50 0.00 INCL_NON_REF_SPLICE TBC1D2^ENSG00000095383.20 chr9:98199416:- GSTT2^ENSG00000099984.11 chr22:23982898:+ YES_LDAS 0.0017 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr22]"] TBC1D13--SMIM19 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D13^ENSG00000107021.16 chr9:128806311:+ SMIM19^ENSG00000176209.12 chr8:42546469:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr8]"] TBC1D13--ENDOG 1 0 1.00 0.00 ONLY_REF_SPLICE TBC1D13^ENSG00000107021.16 chr9:128806311:+ ENDOG^ENSG00000167136.7 chr9:128820739:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr9:0.01Mb]","NEIGHBORS[8070]"] TBC1D10C--FBXO5 1 0 1.00 0.00 INCL_NON_REF_SPLICE TBC1D10C^ENSG00000175463.12 chr11:67405921:+ FBXO5^ENSG00000112029.10 chr6:152982906:- YES_LDAS 0.0034 GT 1.8323 AG 1.3383 ["INTERCHROMOSOMAL[chr11--chr6]"] TARDBPP4--AC012485.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE TARDBPP4^ENSG00000253555.1 chr8:63137813:- AC012485.1^ENSG00000225057.2 chr2:238231867:+ YES_LDAS 0.0034 GT 1.9899 AG 1.3383 ["INTERCHROMOSOMAL[chr8--chr2]"] TAF9P1--TAF9 1 0 0.50 0.00 INCL_NON_REF_SPLICE TAF9P1^ENSG00000226353.1 chrY:17628541:+ TAF9^ENSG00000273841.5 chr5:69365270:- NO_LDAS 0.0017 GC 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chrY--chr5]"] TAF12--MED18 1 0 1.00 0.00 ONLY_REF_SPLICE TAF12^ENSG00000120656.12 chr1:28613247:- MED18^ENSG00000130772.14 chr1:28334417:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr1:0.25Mb]"] SYT14--CARHSP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SYT14^ENSG00000143469.20 chr1:210168253:+ CARHSP1^ENSG00000153048.11 chr16:8855256:- NO_LDAS 0.0034 GT 1.3753 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr16]"] SYS1--DBNDD2 1 0 1.00 0.00 ONLY_REF_SPLICE SYS1^ENSG00000204070.10 chr20:45365686:+ DBNDD2^ENSG00000244274.8 chr20:45408460:+ YES_LDAS 0.0034 GT 1.7232 AG 1.9329 ["INTRACHROMOSOMAL[chr20:0.03Mb]","NEIGHBORS[29259]"] SYNC--AC141424.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SYNC^ENSG00000162520.15 chr1:32680109:- AC141424.1^ENSG00000241525.4 chr17:414103:- YES_LDAS 0.0017 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr17]"] SURF1--NTF3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SURF1^ENSG00000148290.10 chr9:133352694:- NTF3^ENSG00000185652.12 chr12:5513151:+ NO_LDAS 0.0034 GT 1.5656 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chr12]"] SUPT3H--H1-3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUPT3H^ENSG00000196284.17 chr6:44961753:- H1-3^ENSG00000124575.7 chr6:26234387:- NO_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTRACHROMOSOMAL[chr6:18.57Mb]"] SUPT3H--BRIX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUPT3H^ENSG00000196284.17 chr6:45020546:- BRIX1^ENSG00000113460.13 chr5:34922265:+ NO_LDAS 0.0034 GT 1.7968 AG 1.7232 ["INTERCHROMOSOMAL[chr6--chr5]"] SUPT20H--AL354733.2 1 0 1.00 0.00 ONLY_REF_SPLICE SUPT20H^ENSG00000102710.20 chr13:37059559:- AL354733.2^ENSG00000231616.9 chr9:83863661:+ YES_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr9]"] SUN3--MRPL30 1 0 1.00 0.00 ONLY_REF_SPLICE SUN3^ENSG00000164744.13 chr7:48018499:- MRPL30^ENSG00000185414.20 chr2:99186177:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr2]"] SUMO1--AC005252.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUMO1^ENSG00000116030.17 chr2:202207259:- AC005252.3^ENSG00000280415.1 chr12:125860793:+ NO_LDAS 0.0034 GT 1.9656 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr12]"] SUMF1--FEN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUMF1^ENSG00000144455.14 chr3:4452999:- FEN1^ENSG00000168496.4 chr11:61795913:+ NO_LDAS 0.0034 AT 1.9656 AC 1.8062 ["INTERCHROMOSOMAL[chr3--chr11]"] SUMF1--ARFIP1 1 0 1.00 0.00 ONLY_REF_SPLICE SUMF1^ENSG00000144455.14 chr3:4466976:- ARFIP1^ENSG00000164144.16 chr4:152910064:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr4]"] SUGT1P4--STARD8 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUGT1P4^ENSG00000254483.1 chr9:97250809:+ STARD8^ENSG00000130052.13 chrX:68720288:+ NO_LDAS 0.0034 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr9--chrX]"] SUGT1P4--MYL6B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SUGT1P4^ENSG00000254483.1 chr9:97246186:+ MYL6B^ENSG00000196465.10 chr12:56157468:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr9--chr12]"] SUCLG2--TAFA4 1 0 1.00 0.00 ONLY_REF_SPLICE SUCLG2^ENSG00000172340.15 chr3:67609455:- TAFA4^ENSG00000163377.16 chr3:68753018:- YES_LDAS 0.0034 GT 1.9219 AG 1.7056 ["INTRACHROMOSOMAL[chr3:1.08Mb]"] SUB1--NBPF15 1 0 0.33 0.00 INCL_NON_REF_SPLICE SUB1^ENSG00000113387.12 chr5:32588572:+ NBPF15^ENSG00000266338.6 chr1:144440513:- YES_LDAS 0.0011 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr1]"] STXBP5L--IGSF11 1 0 1.00 0.00 ONLY_REF_SPLICE STXBP5L^ENSG00000145087.13 chr3:121240507:+ IGSF11^ENSG00000144847.13 chr3:118930275:- YES_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr3:1.76Mb]"] STX5--WDR74 1 0 1.00 0.00 ONLY_REF_SPLICE STX5^ENSG00000162236.13 chr11:62824166:- WDR74^ENSG00000133316.16 chr11:62839659:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["YOSHIHARA_TCGA","GTEx_recurrent_StarF2019","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","INTRACHROMOSOMAL[chr11:0.00Mb]","LOCAL_REARRANGEMENT:-:[291]"] STX5--MED26 1 0 1.00 0.00 INCL_NON_REF_SPLICE STX5^ENSG00000162236.13 chr11:62831112:- MED26^ENSG00000105085.11 chr19:16628012:- NO_LDAS 0.0034 GT 1.2366 AG 1.4256 ["INTERCHROMOSOMAL[chr11--chr19]"] STX12--PPP1R8 1 0 1.00 0.00 ONLY_REF_SPLICE STX12^ENSG00000117758.14 chr1:27819732:+ PPP1R8^ENSG00000117751.18 chr1:27832756:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.01Mb]","NEIGHBORS[6339]"] STON1--PPP1R21 1 0 1.00 0.00 ONLY_REF_SPLICE STON1^ENSG00000243244.7 chr2:48530829:+ PPP1R21^ENSG00000162869.16 chr2:48451008:+ NO_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:+:[13992]"] STK4--NYNRIN 1 0 0.50 0.00 INCL_NON_REF_SPLICE STK4^ENSG00000101109.12 chr20:44972164:+ NYNRIN^ENSG00000205978.6 chr14:24417441:+ NO_LDAS 0.0017 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr20--chr14]"] STK11IP--TANC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE STK11IP^ENSG00000144589.22 chr2:219606852:+ TANC1^ENSG00000115183.15 chr2:159196758:+ YES_LDAS 0.0034 GT 1.8892 AG 1.5628 ["INTRACHROMOSOMAL[chr2:60.37Mb]"] STEAP1--RAPGEF5 1 0 0.50 0.00 ONLY_REF_SPLICE STEAP1^ENSG00000164647.9 chr7:90162078:+ RAPGEF5^ENSG00000136237.19 chr7:22318037:- YES_LDAS 0.0017 GT 1.7465 AG 1.8295 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr7:67.80Mb]"] STARD9--AC011498.7 1 0 1.00 0.00 INCL_NON_REF_SPLICE STARD9^ENSG00000159433.12 chr15:42688231:+ AC011498.7^ENSG00000280239.1 chr19:4450252:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7968 ["INTERCHROMOSOMAL[chr15--chr19]"] STAG3L5P--ADAMTS7P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAG3L5P^ENSG00000242294.6 chr7:100345898:+ ADAMTS7P3^ENSG00000261143.1 chr15:77990099:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr15]"] STAG3L3--HMGCL 1 0 1.00 0.00 INCL_NON_REF_SPLICE STAG3L3^ENSG00000174353.17 chr7:72999761:- HMGCL^ENSG00000117305.15 chr1:23803967:- NO_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr1]"] STAG3L1--SNX16 1 0 0.33 0.00 INCL_NON_REF_SPLICE STAG3L1^ENSG00000205583.13 chr7:75366438:+ SNX16^ENSG00000104497.14 chr8:81839891:- YES_LDAS 0.0011 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chr8]"] SSX2IP--AC008676.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SSX2IP^ENSG00000117155.17 chr1:84655832:- AC008676.1^ENSG00000248544.2 chr5:157376207:- NO_LDAS 0.0034 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr5]"] SSBP1--MGAM 1 0 0.50 0.00 INCL_NON_REF_SPLICE SSBP1^ENSG00000106028.11 chr7:141750384:+ MGAM^ENSG00000257335.8 chr7:141988933:+ YES_LDAS 0.0017 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr7:0.12Mb]"] SSB--METTL5 1 0 1.00 0.00 ONLY_REF_SPLICE SSB^ENSG00000138385.16 chr2:169801026:+ METTL5^ENSG00000138382.15 chr2:169821273:- YES_LDAS 0.0034 GT 1.9086 AG 1.2729 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1983]"] SRP54--DGKH 1 0 1.00 0.00 ONLY_REF_SPLICE SRP54^ENSG00000100883.13 chr14:35019074:+ DGKH^ENSG00000102780.17 chr13:42229099:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr13]"] SRIP1--SRI 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRIP1^ENSG00000248660.1 chr4:58103246:+ SRI^ENSG00000075142.14 chr7:88209439:- NO_LDAS 0.0034 GT 1.5219 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr7]"] SRFBP1--AC010255.2 1 0 1.00 0.00 ONLY_REF_SPLICE SRFBP1^ENSG00000151304.6 chr5:122022407:+ AC010255.2^ENSG00000250803.6 chr5:122179550:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr5:0.05Mb]","NEIGHBORS[54052]"] SRBD1--NFAM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SRBD1^ENSG00000068784.13 chr2:45573207:- NFAM1^ENSG00000235568.7 chr22:42384462:- NO_LDAS 0.0034 GT 1.8256 AG 1.8323 ["INTERCHROMOSOMAL[chr2--chr22]"] SPTY2D1--SERGEF 1 0 1.00 0.00 ONLY_REF_SPLICE SPTY2D1^ENSG00000179119.15 chr11:18634198:- SERGEF^ENSG00000129158.11 chr11:18008076:- YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr11:0.59Mb]"] SPTLC1--ZFAND6 1 0 1.00 0.00 ONLY_REF_SPLICE SPTLC1^ENSG00000090054.15 chr9:92055405:- ZFAND6^ENSG00000086666.19 chr15:80131180:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr15]"] SPSB2--P2RX6 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPSB2^ENSG00000111671.10 chr12:6872226:- P2RX6^ENSG00000099957.16 chr22:21028482:+ NO_LDAS 0.0034 GC 1.6049 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr22]"] SPOUT1--KRT15 1 0 0.50 0.00 INCL_NON_REF_SPLICE SPOUT1^ENSG00000198917.13 chr9:128827064:- KRT15^ENSG00000171346.16 chr17:41515485:- NO_LDAS 0.0017 GT 1.7819 AG 1.8062 ["INTERCHROMOSOMAL[chr9--chr17]"] SPON1-AS1--RRAS2 1 0 1.00 0.00 ONLY_REF_SPLICE SPON1-AS1^ENSG00000254418.1 chr11:14273654:- RRAS2^ENSG00000133818.14 chr11:14295855:- YES_LDAS 0.0034 GT 1.9086 AG 1.8295 ["INTRACHROMOSOMAL[chr11:0.00Mb]","LOCAL_REARRANGEMENT:-:[4231]"] SPINDOC--SAC3D1 1 0 1.00 0.00 ONLY_REF_SPLICE SPINDOC^ENSG00000168005.9 chr11:63819002:+ SAC3D1^ENSG00000168061.17 chr11:65044225:+ NO_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTRACHROMOSOMAL[chr11:1.21Mb]"] SPIN3--PHLPP2 1 0 1.00 0.00 ONLY_REF_SPLICE SPIN3^ENSG00000204271.13 chrX:56994723:- PHLPP2^ENSG00000040199.18 chr16:71644855:- YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr16]"] SPIN3--EXOC4 1 0 1.00 0.00 ONLY_REF_SPLICE SPIN3^ENSG00000204271.13 chrX:56984266:- EXOC4^ENSG00000131558.15 chr7:133288922:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7968 ["INTERCHROMOSOMAL[chrX--chr7]"] SPESP1--ESAM 1 0 1.00 0.00 ONLY_REF_SPLICE SPESP1^ENSG00000258484.4 chr15:68818317:+ ESAM^ENSG00000149564.12 chr11:124758527:- NO_LDAS 0.0034 GT 1.6402 AG 1.2310 ["INTERCHROMOSOMAL[chr15--chr11]"] SPESP1--AC027088.1 1 0 1.00 0.00 ONLY_REF_SPLICE SPESP1^ENSG00000258484.4 chr15:68818317:+ AC027088.1^ENSG00000137808.12 chr15:68974729:+ YES_LDAS 0.0034 GT 1.6402 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.02Mb]","NEIGHBORS_OVERLAP:+:+:[16307]"] SPCS2P4--PANX1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SPCS2P4^ENSG00000228589.3 chr1:28096225:- PANX1^ENSG00000110218.9 chr11:94178369:+ YES_LDAS 0.0034 GT 1.9219 AG 1.4295 ["INTERCHROMOSOMAL[chr1--chr11]"] SPATA17--GULP1 1 0 1.00 0.00 ONLY_REF_SPLICE SPATA17^ENSG00000162814.11 chr1:217737967:+ GULP1^ENSG00000144366.16 chr2:188477659:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr2]"] SPAG5--EIF3J 1 0 1.00 0.00 ONLY_REF_SPLICE SPAG5^ENSG00000076382.17 chr17:28579365:- EIF3J^ENSG00000104131.13 chr15:44554553:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr15]"] SP100--DYNLRB1 1 0 1.00 0.00 ONLY_REF_SPLICE SP100^ENSG00000067066.17 chr2:230449150:+ DYNLRB1^ENSG00000125971.17 chr20:34540581:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr20]"] SP100--AL078622.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SP100^ENSG00000067066.17 chr2:230470277:+ AL078622.1^ENSG00000286381.1 chr22:49051520:- NO_LDAS 0.0034 GT 1.7056 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr22]"] SORBS1--PEX3 1 0 1.00 0.00 ONLY_REF_SPLICE SORBS1^ENSG00000095637.22 chr10:95367650:- PEX3^ENSG00000034693.15 chr6:143470961:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr6]"] SOCS2--LNPK 1 0 1.00 0.00 ONLY_REF_SPLICE SOCS2^ENSG00000120833.14 chr12:93575173:+ LNPK^ENSG00000144320.14 chr2:175964589:- YES_LDAS 0.0034 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr12--chr2]"] SNX29P1--CRYM-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNX29P1^ENSG00000158482.10 chr16:21385932:+ CRYM-AS1^ENSG00000189149.12 chr16:21315884:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr16:0.04Mb]","LOCAL_REARRANGEMENT:+:[37611]"] SNX29P1--AC025279.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE SNX29P1^ENSG00000158482.10 chr16:21385932:+ AC025279.2^ENSG00000260413.1 chr16:29326347:+ YES_LDAS 0.0017 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr16:7.93Mb]"] SNX12--NUDT19P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNX12^ENSG00000147164.12 chrX:71061028:- NUDT19P3^ENSG00000216723.1 chr6:114020163:- NO_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chrX--chr6]"] SNRPF--EFHC1 1 0 1.00 0.00 ONLY_REF_SPLICE SNRPF^ENSG00000139343.10 chr12:95889181:+ EFHC1^ENSG00000096093.16 chr6:52452688:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr6]"] SNRPE--CHMP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNRPE^ENSG00000182004.13 chr1:203869920:+ CHMP5^ENSG00000086065.14 chr9:33278156:+ NO_LDAS 0.0034 GT 1.9329 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr9]"] SNRPD3--CTF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNRPD3^ENSG00000100028.12 chr22:24572061:+ CTF1^ENSG00000150281.7 chr16:30902862:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr16]"] SNORC--RAMP1 1 0 1.00 0.00 ONLY_REF_SPLICE SNORC^ENSG00000182600.9 chr2:232876122:+ RAMP1^ENSG00000132329.11 chr2:237874645:+ YES_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTRACHROMOSOMAL[chr2:4.98Mb]"] SNIP1--GNL2 1 0 1.00 0.00 ONLY_REF_SPLICE SNIP1^ENSG00000163877.11 chr1:37554006:- GNL2^ENSG00000134697.13 chr1:37569302:- YES_LDAS 0.0034 GT 1.8892 AG 1.3996 ["ChimerSeq","INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:-:[12523]"] SNHG5--MBD2 1 0 1.00 0.00 ONLY_REF_SPLICE SNHG5^ENSG00000203875.13 chr6:85677954:- MBD2^ENSG00000134046.12 chr18:54205157:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr18]"] SNAPC3--MUC6 1 0 1.00 0.00 INCL_NON_REF_SPLICE SNAPC3^ENSG00000164975.15 chr9:15463501:+ MUC6^ENSG00000184956.16 chr11:1030386:- NO_LDAS 0.0034 GT 1.2310 AG 0.6998 ["INTERCHROMOSOMAL[chr9--chr11]"] SNAPC3--GUCY2EP 1 0 0.33 0.00 INCL_NON_REF_SPLICE SNAPC3^ENSG00000164975.15 chr9:15458048:+ GUCY2EP^ENSG00000204529.4 chr11:76707516:- NO_LDAS 0.0011 GT 1.4566 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr11]"] SNAI3-AS1--SEMA6A-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SNAI3-AS1^ENSG00000260630.7 chr16:88686547:+ SEMA6A-AS1^ENSG00000248445.5 chr5:116447585:+ NO_LDAS 0.0017 GT 1.4295 AG 1.8062 ["INTERCHROMOSOMAL[chr16--chr5]"] SMYD3--CEP170P1 1 0 1.00 0.00 ONLY_REF_SPLICE SMYD3^ENSG00000185420.19 chr1:246355031:- CEP170P1^ENSG00000154608.14 chr4:118488128:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr4]"] SMIM13--ATP7B 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMIM13^ENSG00000224531.6 chr6:11094389:+ ATP7B^ENSG00000123191.16 chr13:51940477:- NO_LDAS 0.0034 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr13]"] SMIM10L1--LINC01252 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMIM10L1^ENSG00000256537.5 chr12:11190111:+ LINC01252^ENSG00000247157.7 chr12:11549590:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr12:0.37Mb]"] SMC6--ZBTB3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SMC6^ENSG00000163029.16 chr2:17695152:- ZBTB3^ENSG00000185670.9 chr11:62753282:- NO_LDAS 0.0034 GT 1.3996 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr11]"] SMC6--NOL10 1 0 1.00 0.00 ONLY_REF_SPLICE SMC6^ENSG00000163029.16 chr2:17753626:- NOL10^ENSG00000115761.16 chr2:10644372:- YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr2:6.97Mb]"] SMBD1P--MUC20 1 0 0.50 0.00 ONLY_REF_SPLICE SMBD1P^ENSG00000283426.1 chr3:195708841:+ MUC20^ENSG00000176945.17 chr3:195724680:+ YES_LDAS 0.0017 GT 1.8892 AG 1.3710 ["INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[9241]"] SMAD6--CDC42EP5 1 0 0.50 0.00 INCL_NON_REF_SPLICE SMAD6^ENSG00000137834.15 chr15:66703471:+ CDC42EP5^ENSG00000167617.3 chr19:54465163:- NO_LDAS 0.0017 GT 1.4295 AG 1.0530 ["INTERCHROMOSOMAL[chr15--chr19]"] SLCO6A1--INKA2 1 0 1.00 0.00 ONLY_REF_SPLICE SLCO6A1^ENSG00000205359.10 chr5:102458382:- INKA2^ENSG00000197852.12 chr1:111680774:- YES_LDAS 0.0034 GT 1.5058 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr1]"] SLCO1A2--AC011029.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLCO1A2^ENSG00000084453.16 chr12:21395355:- AC011029.1^ENSG00000287352.1 chr8:76306467:- YES_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr8]"] SLC6A16--AC011450.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC6A16^ENSG00000063127.16 chr19:49311084:- AC011450.1^ENSG00000197813.6 chr19:49332142:- YES_LDAS 0.0034 GT 1.8256 AG 1.8295 ["INTRACHROMOSOMAL[chr19:0.01Mb]","LOCAL_REARRANGEMENT:-:[6310]"] SLC50A1--AC010336.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC50A1^ENSG00000169241.19 chr1:155135991:+ AC010336.1^ENSG00000214248.2 chr19:7902246:- NO_LDAS 0.0034 GT 1.5301 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr19]"] SLC49A3--PAXIP1-DT 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC49A3^ENSG00000169026.13 chr4:686532:- PAXIP1-DT^ENSG00000273344.1 chr7:155003962:+ YES_LDAS 0.0034 GT 1.3996 AG 1.3383 ["INTERCHROMOSOMAL[chr4--chr7]"] SLC45A1--CDCP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC45A1^ENSG00000162426.16 chr1:8325349:+ CDCP2^ENSG00000157211.11 chr1:54152885:- NO_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTRACHROMOSOMAL[chr1:45.79Mb]"] SLC45A1--CDCP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC45A1^ENSG00000162426.16 chr1:8324726:+ CDCP2^ENSG00000157211.11 chr1:54152885:- NO_LDAS 0.0034 GT 1.7232 AG 1.7819 ["INTRACHROMOSOMAL[chr1:45.79Mb]"] SLC44A5--CTC-338M12.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC44A5^ENSG00000137968.16 chr1:75206646:- CTC-338M12.4^ENSG00000233937.7 chr5:181256557:+ YES_LDAS 0.0034 AT 1.9656 AC 1.7819 ["INTERCHROMOSOMAL[chr1--chr5]"] SLC41A2--TMTC2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC41A2^ENSG00000136052.9 chr12:104909655:- TMTC2^ENSG00000179104.9 chr12:82857010:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr12:21.67Mb]"] SLC41A2--PPHLN1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC41A2^ENSG00000136052.9 chr12:104927973:- PPHLN1^ENSG00000134283.18 chr12:42459278:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr12:62.34Mb]"] SLC39A1--ARL8A 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC39A1^ENSG00000143570.19 chr1:153960666:- ARL8A^ENSG00000143862.8 chr1:202138038:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chr1:48.17Mb]"] SLC38A6--MNAT1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC38A6^ENSG00000139974.16 chr14:61052135:+ MNAT1^ENSG00000020426.11 chr14:60968229:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8323 ["DEEPEST2019","INTRACHROMOSOMAL[chr14:0.01Mb]","LOCAL_REARRANGEMENT:+:[11149]"] SLC35E4--APLF 1 0 1.00 0.00 ONLY_REF_SPLICE SLC35E4^ENSG00000100036.13 chr22:30637069:+ APLF^ENSG00000169621.10 chr2:68587808:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr22--chr2]"] SLC35D3--DYNLRB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC35D3^ENSG00000182747.5 chr6:136924479:+ DYNLRB1^ENSG00000125971.17 chr20:34526272:+ NO_LDAS 0.0034 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr20]"] SLC35B2--UBXN7 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC35B2^ENSG00000157593.19 chr6:44255176:- UBXN7^ENSG00000163960.12 chr3:196356846:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr3]"] SLC30A7--AC093157.1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC30A7^ENSG00000162695.12 chr1:100974902:+ AC093157.1^ENSG00000233184.7 chr1:101086852:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr1:0.04Mb]","NEIGHBORS[44087]"] SLC30A6--BRD8 1 0 1.00 0.00 ONLY_REF_SPLICE SLC30A6^ENSG00000152683.14 chr2:32209561:+ BRD8^ENSG00000112983.18 chr5:138172826:- NO_LDAS 0.0034 GT 1.6895 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr5]"] SLC30A1--EBP 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC30A1^ENSG00000170385.10 chr1:211575436:- EBP^ENSG00000147155.11 chrX:48522038:+ NO_LDAS 0.0034 AT 1.8062 AC 1.5546 ["INTERCHROMOSOMAL[chr1--chrX]"] SLC2A9--EMILIN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC2A9^ENSG00000109667.12 chr4:9887567:- EMILIN3^ENSG00000183798.5 chr20:41360116:- NO_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr20]"] SLC29A3--PAX3 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC29A3^ENSG00000198246.9 chr10:71362366:+ PAX3^ENSG00000135903.20 chr2:222298765:- NO_LDAS 0.0034 GT 1.4295 AG 1.1033 ["INTERCHROMOSOMAL[chr10--chr2]"] SLC26A7--LRRC69 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC26A7^ENSG00000147606.9 chr8:91394039:+ LRRC69^ENSG00000214954.8 chr8:91102219:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS_OVERLAP:+:+:[9742]"] SLC25A25--POLA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC25A25^ENSG00000148339.12 chr9:128106257:+ POLA1^ENSG00000101868.13 chrX:24996215:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chrX]"] SLC25A24--ZNF644 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A24^ENSG00000085491.17 chr1:108181941:- ZNF644^ENSG00000122482.21 chr1:90941309:- YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr1:17.11Mb]"] SLC25A13--ELAPOR2 1 0 1.00 0.00 ONLY_REF_SPLICE SLC25A13^ENSG00000004864.14 chr7:96321942:- ELAPOR2^ENSG00000164659.15 chr7:86926916:- YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTRACHROMOSOMAL[chr7:9.06Mb]"] SLC1A4--BPNT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC1A4^ENSG00000115902.11 chr2:65018596:+ BPNT2^ENSG00000104331.9 chr8:56980185:- YES_LDAS 0.0034 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr8]"] SLC18B1--MED23 1 0 1.00 0.00 ONLY_REF_SPLICE SLC18B1^ENSG00000146409.12 chr6:132796982:- MED23^ENSG00000112282.18 chr6:131618519:- YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTRACHROMOSOMAL[chr6:1.14Mb]"] SLC17A9--AP3M1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLC17A9^ENSG00000101194.18 chr20:62962722:+ AP3M1^ENSG00000185009.13 chr10:74138314:- YES_LDAS 0.0034 GT 1.4295 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr10]"] SLC11A2--MYBL1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC11A2^ENSG00000110911.17 chr12:51006174:- MYBL1^ENSG00000185697.16 chr8:66599142:- NO_LDAS 0.0034 GC 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr8]"] SLC10A7--ZGRF1 1 0 1.00 0.00 ONLY_REF_SPLICE SLC10A7^ENSG00000120519.15 chr4:146503849:- ZGRF1^ENSG00000138658.16 chr4:112589874:- YES_LDAS 0.0034 GT 1.5301 AG 1.8892 ["INTRACHROMOSOMAL[chr4:33.62Mb]"] SLAMF1--PRICKLE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SLAMF1^ENSG00000117090.15 chr1:160608271:- PRICKLE1^ENSG00000139174.12 chr12:42464608:- NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr12]"] SKA3--CDRT4 1 0 1.00 0.00 ONLY_REF_SPLICE SKA3^ENSG00000165480.16 chr13:21176375:- CDRT4^ENSG00000239704.11 chr17:15440285:- YES_LDAS 0.0034 GT 1.4295 AG 1.9899 ["INTERCHROMOSOMAL[chr13--chr17]"] SIX3--AC012354.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIX3^ENSG00000138083.5 chr2:44944727:+ AC012354.1^ENSG00000225156.2 chr2:44967696:+ NO_LDAS 0.0034 GT 1.6402 AG 1.5301 ["INTRACHROMOSOMAL[chr2:0.01Mb]","NEIGHBORS[8593]"] SIVA1--SNX30 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIVA1^ENSG00000184990.13 chr14:104753312:+ SNX30^ENSG00000148158.17 chr9:112874110:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr9]"] SIRT6--ADAT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SIRT6^ENSG00000077463.15 chr19:4180782:- ADAT2^ENSG00000189007.16 chr6:143425062:- YES_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr6]"] SIMC1--PSRC1 1 0 1.00 0.00 ONLY_REF_SPLICE SIMC1^ENSG00000170085.18 chr5:176337146:+ PSRC1^ENSG00000134222.16 chr1:109281251:- YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr5--chr1]"] SHPK--LINC02395 1 0 1.00 0.00 ONLY_REF_SPLICE SHPK^ENSG00000197417.9 chr17:3615337:- LINC02395^ENSG00000257771.6 chr12:49920006:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr12]"] SHC2--COPS9 1 0 1.00 0.00 ONLY_REF_SPLICE SHC2^ENSG00000129946.10 chr19:430684:- COPS9^ENSG00000172428.11 chr2:240134005:- NO_LDAS 0.0034 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr2]"] SH2B2--PHETA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SH2B2^ENSG00000160999.10 chr7:102300595:+ PHETA1^ENSG00000198324.13 chr12:111362995:- NO_LDAS 0.0034 GT 1.4716 AG 1.3383 ["INTERCHROMOSOMAL[chr7--chr12]"] SGPP1--DEGS1 1 0 1.00 0.00 ONLY_REF_SPLICE SGPP1^ENSG00000126821.8 chr14:63727261:- DEGS1^ENSG00000143753.13 chr1:224189577:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr1]"] SGMS2--ZNF639 1 0 1.00 0.00 ONLY_REF_SPLICE SGMS2^ENSG00000164023.14 chr4:107858553:+ ZNF639^ENSG00000121864.10 chr3:179332989:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr3]"] SGK3--WWP1 1 0 1.00 0.00 ONLY_REF_SPLICE SGK3^ENSG00000104205.16 chr8:66712833:+ WWP1^ENSG00000123124.14 chr8:86411538:+ NO_LDAS 0.0034 GT 1.4295 AG 1.7819 ["INTRACHROMOSOMAL[chr8:19.48Mb]"] SGK2--L3MBTL1 1 0 1.00 0.00 ONLY_REF_SPLICE SGK2^ENSG00000101049.17 chr20:43580061:+ L3MBTL1^ENSG00000185513.17 chr20:43528657:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTRACHROMOSOMAL[chr20:0.01Mb]","LOCAL_REARRANGEMENT:+:[8014]"] SFXN5--IK 1 0 1.00 0.00 ONLY_REF_SPLICE SFXN5^ENSG00000144040.13 chr2:73042488:- IK^ENSG00000113141.18 chr5:140651714:+ YES_LDAS 0.0034 GT 1.9329 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr5]"] SFXN5--CTAGE4 1 0 0.20 0.00 INCL_NON_REF_SPLICE SFXN5^ENSG00000144040.13 chr2:72968493:- CTAGE4^ENSG00000225932.3 chr7:144183513:+ NO_LDAS 0.0007 GC 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr7]"] SETD6--NDRG4 1 0 1.00 0.00 INCL_NON_REF_SPLICE SETD6^ENSG00000103037.12 chr16:58515846:+ NDRG4^ENSG00000103034.14 chr16:58511213:+ YES_LDAS 0.0034 GT 1.8256 AG 1.6895 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[1851]"] SENP7--GK5 1 0 1.00 0.00 INCL_NON_REF_SPLICE SENP7^ENSG00000138468.16 chr3:101332091:- GK5^ENSG00000175066.16 chr3:142225416:- NO_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTRACHROMOSOMAL[chr3:40.64Mb]"] SEMA4C--GGA2 1 0 1.00 0.00 ONLY_REF_SPLICE SEMA4C^ENSG00000168758.11 chr2:96863682:- GGA2^ENSG00000103365.15 chr16:23486790:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr16]"] SEMA3F--AC104984.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEMA3F^ENSG00000001617.12 chr3:50159734:+ AC104984.1^ENSG00000264125.1 chr17:30205996:+ NO_LDAS 0.0034 GT 1.9899 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr17]"] SEM1--PARP2 1 0 1.00 0.00 ONLY_REF_SPLICE SEM1^ENSG00000127922.9 chr7:96709688:- PARP2^ENSG00000129484.14 chr14:20354085:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chr14]"] SELENOT--SCFD2 1 0 1.00 0.00 ONLY_REF_SPLICE SELENOT^ENSG00000198843.13 chr3:150603499:+ SCFD2^ENSG00000184178.16 chr4:53313763:- NO_LDAS 0.0034 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr4]"] SELENOT--POLR2H 1 0 1.00 0.00 INCL_NON_REF_SPLICE SELENOT^ENSG00000198843.13 chr3:150603499:+ POLR2H^ENSG00000163882.9 chr3:184365467:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr3:33.73Mb]"] SELENOF--GTF2B 1 0 1.00 0.00 ONLY_REF_SPLICE SELENOF^ENSG00000183291.17 chr1:86903281:- GTF2B^ENSG00000137947.12 chr1:88864114:- NO_LDAS 0.0034 GT 1.7232 AG 1.8323 ["INTRACHROMOSOMAL[chr1:1.94Mb]"] SECISBP2L--COPS2 1 0 1.00 0.00 ONLY_REF_SPLICE SECISBP2L^ENSG00000138593.9 chr15:49027365:- COPS2^ENSG00000166200.15 chr15:49119167:- YES_LDAS 0.0034 GT 1.7232 AG 1.9329 ["DEEPEST2019","INTRACHROMOSOMAL[chr15:0.06Mb]","LOCAL_REARRANGEMENT:-:[59621]"] SEC62--SLC37A3 1 0 1.00 0.00 ONLY_REF_SPLICE SEC62^ENSG00000008952.17 chr3:169977051:+ SLC37A3^ENSG00000157800.18 chr7:140382596:- YES_LDAS 0.0034 GT 1.9656 AG 1.3996 ["INTERCHROMOSOMAL[chr3--chr7]"] SEC61G--AC005520.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SEC61G^ENSG00000132432.14 chr7:54755781:- AC005520.2^ENSG00000259065.2 chr14:73787951:+ NO_LDAS 0.0034 GT 1.4295 AG 1.7232 ["INTERCHROMOSOMAL[chr7--chr14]"] SEC24D--TAF1B 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24D^ENSG00000150961.15 chr4:118728561:- TAF1B^ENSG00000115750.17 chr2:9845220:+ YES_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr4--chr2]"] SEC24B-AS1--COL25A1 1 0 1.00 0.00 ONLY_REF_SPLICE SEC24B-AS1^ENSG00000247950.7 chr4:109362752:- COL25A1^ENSG00000188517.16 chr4:109302075:- YES_LDAS 0.0034 GT 1.7968 AG 1.5058 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.04Mb]","NEIGHBORS[44723]"] SEC22A--ABCC5 1 0 1.00 0.00 ONLY_REF_SPLICE SEC22A^ENSG00000121542.12 chr3:123201986:+ ABCC5^ENSG00000114770.17 chr3:183953270:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr3:60.65Mb]"] SEC11A--HSPH1 1 0 1.00 0.00 ONLY_REF_SPLICE SEC11A^ENSG00000140612.14 chr15:84716025:- HSPH1^ENSG00000120694.20 chr13:31148092:- YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr15--chr13]"] SDR9C7--RDH16 1 0 1.00 0.00 ONLY_REF_SPLICE SDR9C7^ENSG00000170426.2 chr12:56930226:- RDH16^ENSG00000139547.8 chr12:56952990:- YES_LDAS 0.0034 GT 1.9656 AG 1.9899 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr12:0.02Mb]","LOCAL_REARRANGEMENT:-:[17023]"] SDCBP2-AS1--DZANK1 1 0 1.00 0.00 ONLY_REF_SPLICE SDCBP2-AS1^ENSG00000234684.7 chr20:1325529:+ DZANK1^ENSG00000089091.16 chr20:18398626:- YES_LDAS 0.0034 GT 1.6049 AG 1.8323 ["INTRACHROMOSOMAL[chr20:17.00Mb]"] SCLT1--TNNT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE SCLT1^ENSG00000151466.12 chr4:128871361:- TNNT2^ENSG00000118194.20 chr1:201372038:- NO_LDAS 0.0034 GC 1.2867 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr1]"] SCIN--AC013470.2 1 0 1.00 0.00 ONLY_REF_SPLICE SCIN^ENSG00000006747.15 chr7:12570985:+ AC013470.2^ENSG00000226690.8 chr7:12528902:+ NO_LDAS 0.0034 GT 1.8256 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:+:[28355]"] SAV1--GPHN 1 0 1.00 0.00 ONLY_REF_SPLICE SAV1^ENSG00000151748.15 chr14:50644744:- GPHN^ENSG00000171723.16 chr14:66824474:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTRACHROMOSOMAL[chr14:15.84Mb]"] SASH1--SAMD5 1 0 1.00 0.00 INCL_NON_REF_SPLICE SASH1^ENSG00000111961.18 chr6:148468555:+ SAMD5^ENSG00000203727.4 chr6:147508766:+ NO_LDAS 0.0034 AT 1.8892 TC 1.7465 ["ChimerKB","ChimerPub","HGNC_GENEFAM","INTRACHROMOSOMAL[chr6:0.70Mb]"] SARDH--AC087623.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE SARDH^ENSG00000123453.18 chr9:133690522:- AC087623.1^ENSG00000255201.1 chr8:38421856:+ NO_LDAS 0.0017 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr9--chr8]"] SAMD5--AL033504.1 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147733729:+ NO_LDAS 0.0034 GT 1.8295 AG 1.5219 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] SAMD5--AL033504.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE SAMD5^ENSG00000203727.4 chr6:147509387:+ AL033504.1^ENSG00000227681.5 chr6:147692400:+ YES_LDAS 0.0034 GT 1.8295 AG 1.6895 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[90682]"] SAMD13--DNASE2B 1 0 1.00 0.00 ONLY_REF_SPLICE SAMD13^ENSG00000203943.9 chr1:84325748:+ DNASE2B^ENSG00000137976.8 chr1:84401901:+ YES_LDAS 0.0034 GT 1.9899 AG 1.4716 ["ChimerSeq","INTRACHROMOSOMAL[chr1:0.01Mb]","NEIGHBORS[8527]"] SAA1--HPS5 1 0 0.50 0.00 ONLY_REF_SPLICE SAA1^ENSG00000173432.12 chr11:18269333:+ HPS5^ENSG00000110756.18 chr11:18317907:- YES_LDAS 0.0017 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr11:0.01Mb]","LOCAL_INVERSION:+:-:[8691]"] S100A13--RNF11 1 0 1.00 0.00 INCL_NON_REF_SPLICE S100A13^ENSG00000189171.14 chr1:153626320:- RNF11^ENSG00000123091.5 chr1:51236734:+ YES_LDAS 0.0034 GT 1.8295 AG 1.6402 ["INTRACHROMOSOMAL[chr1:102.35Mb]"] RXYLT1--AMN1 1 0 1.00 0.00 ONLY_REF_SPLICE RXYLT1^ENSG00000118600.12 chr12:63785072:+ AMN1^ENSG00000151743.11 chr12:31702007:- NO_LDAS 0.0034 GT 1.6729 AG 1.7819 ["INTRACHROMOSOMAL[chr12:32.05Mb]"] RWDD2B--USP16 1 0 1.00 0.00 ONLY_REF_SPLICE RWDD2B^ENSG00000156253.7 chr21:29019211:- USP16^ENSG00000156256.15 chr21:29027873:+ YES_LDAS 0.0034 GT 1.7819 AG 1.2419 ["INTRACHROMOSOMAL[chr21:0.01Mb]","LOCAL_INVERSION:-:+:[5269]"] RTCA--MFSD14A 1 0 1.00 0.00 ONLY_REF_SPLICE RTCA^ENSG00000137996.13 chr1:100274965:+ MFSD14A^ENSG00000156875.14 chr1:100049909:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.18Mb]"] RSU1--PGBD2 1 0 1.00 0.00 ONLY_REF_SPLICE RSU1^ENSG00000148484.18 chr10:16752539:- PGBD2^ENSG00000185220.12 chr1:248917279:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr1]"] RSU1--MINDY3 1 0 1.00 0.00 ONLY_REF_SPLICE RSU1^ENSG00000148484.18 chr10:16752539:- MINDY3^ENSG00000148481.14 chr10:15821726:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.73Mb]"] RSU1--IFT74 1 0 1.00 0.00 ONLY_REF_SPLICE RSU1^ENSG00000148484.18 chr10:16752539:- IFT74^ENSG00000096872.17 chr9:27044742:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr9]"] RSU1--CCDC13 1 0 1.00 0.00 ONLY_REF_SPLICE RSU1^ENSG00000148484.18 chr10:16816973:- CCDC13^ENSG00000244607.7 chr3:42758351:- YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr3]"] RSPH6A--SLFNL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RSPH6A^ENSG00000104941.8 chr19:45814710:- SLFNL1^ENSG00000171790.15 chr1:41017311:- NO_LDAS 0.0034 GT 1.7056 AG 1.5329 ["INTERCHROMOSOMAL[chr19--chr1]"] RRP8--CCHCR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RRP8^ENSG00000132275.11 chr11:6592720:- CCHCR1^ENSG00000204536.14 chr6:31148728:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr6]"] RPUSD3--NDUFB2 1 0 1.00 0.00 ONLY_REF_SPLICE RPUSD3^ENSG00000156990.14 chr3:9841983:- NDUFB2^ENSG00000090266.13 chr7:140706563:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr7]"] RPS17P5--AL355375.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPS17P5^ENSG00000060303.5 chr6:50857435:- AL355375.1^ENSG00000217067.2 chr6:62547518:+ NO_LDAS 0.0034 GT 1.6895 AG 1.7465 ["INTRACHROMOSOMAL[chr6:11.69Mb]"] RPP38--TTC21B 1 0 1.00 0.00 ONLY_REF_SPLICE RPP38^ENSG00000152464.15 chr10:15102336:+ TTC21B^ENSG00000123607.16 chr2:165871020:- YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr2]"] RPL36AP29--AC018868.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPL36AP29^ENSG00000224683.1 chr7:16209154:+ AC018868.1^ENSG00000231409.3 chr15:34943290:+ NO_LDAS 0.0017 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr15]"] RPL36A--CENPI 1 0 1.00 0.00 ONLY_REF_SPLICE RPL36A^ENSG00000241343.10 chrX:101391822:+ CENPI^ENSG00000102384.13 chrX:101101058:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chrX:0.23Mb]"] RPL34--OSTCP5 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL34^ENSG00000109475.17 chr4:108630141:+ OSTCP5^ENSG00000234315.1 chr1:45070290:- YES_LDAS 0.0034 GT 1.7465 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr1]"] RPL32P3--FAM177A1 1 0 1.00 0.00 ONLY_REF_SPLICE RPL32P3^ENSG00000251474.6 chr3:129393635:- FAM177A1^ENSG00000151327.13 chr14:35046505:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr3--chr14]"] RPL23AP8--RPL23AP42 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPL23AP8^ENSG00000241582.1 chr14:34694565:+ RPL23AP42^ENSG00000234851.4 chr3:161429579:- NO_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr3]"] RPF2--ETS2 1 0 1.00 0.00 ONLY_REF_SPLICE RPF2^ENSG00000197498.13 chr6:110985138:+ ETS2^ENSG00000157557.13 chr21:38810035:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr21]"] RPEL1--TSSK3 1 0 0.50 0.00 INCL_NON_REF_SPLICE RPEL1^ENSG00000235376.5 chr10:103246527:+ TSSK3^ENSG00000162526.7 chr1:32362662:+ NO_LDAS 0.0017 GT 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr1]"] RPA2--HOXA-AS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RPA2^ENSG00000117748.10 chr1:27914059:- HOXA-AS3^ENSG00000254369.6 chr7:27155300:+ NO_LDAS 0.0034 GT 1.5546 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr7]"] RNVU1-34--LONRF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNVU1-34^ENSG00000200997.1 chr17:58679639:- LONRF1^ENSG00000154359.13 chr8:12735400:- YES_LDAS 0.0034 GT 1.7056 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr8]"] RNVU1-27--KRTDAP 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNVU1-27^ENSG00000274210.1 chr1:148522796:+ KRTDAP^ENSG00000188508.11 chr19:35488485:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr19]"] RNVU1-15--PLS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNVU1-15^ENSG00000207205.1 chr1:144412764:+ PLS3^ENSG00000102024.18 chrX:115645021:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chrX]"] RNU2-63P--RNF166 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNU2-63P^ENSG00000222724.1 chr2:88016333:- RNF166^ENSG00000158717.11 chr16:88701418:- YES_LDAS 0.0034 GT 1.7232 AG 1.6402 ["INTERCHROMOSOMAL[chr2--chr16]"] RNGTT--ZHX2 1 0 1.00 0.00 ONLY_REF_SPLICE RNGTT^ENSG00000111880.16 chr6:88678353:- ZHX2^ENSG00000178764.8 chr8:122973242:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr8]"] RNF8--AC004637.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF8^ENSG00000112130.17 chr6:37354275:+ AC004637.1^ENSG00000267304.1 chr19:3674156:+ NO_LDAS 0.0034 GT 1.6402 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr19]"] RNF6--CDK8 1 0 1.00 0.00 ONLY_REF_SPLICE RNF6^ENSG00000127870.17 chr13:26215474:- CDK8^ENSG00000132964.12 chr13:26337567:+ YES_LDAS 0.0034 GT 1.9656 AG 1.3996 ["INTRACHROMOSOMAL[chr13:0.03Mb]","LOCAL_INVERSION:-:+:[31790]"] RNF5--TSBP1-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF5^ENSG00000204308.8 chr6:32212417:+ TSBP1-AS1^ENSG00000225914.3 chr6:32365780:+ YES_LDAS 0.0034 GT 1.5058 AG 1.8323 ["INTRACHROMOSOMAL[chr6:0.07Mb]","NEIGHBORS[73847]"] RNF24--WDR37 1 0 1.00 0.00 ONLY_REF_SPLICE RNF24^ENSG00000101236.17 chr20:4015437:- WDR37^ENSG00000047056.16 chr10:1080011:+ YES_LDAS 0.0034 GT 1.3996 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr10]"] RNF217--PDSS2 1 0 1.00 0.00 ONLY_REF_SPLICE RNF217^ENSG00000146373.16 chr6:124963426:+ PDSS2^ENSG00000164494.12 chr6:107334332:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr6:17.50Mb]"] RNF2--ACBD6 1 0 1.00 0.00 ONLY_REF_SPLICE RNF2^ENSG00000121481.11 chr1:185045649:+ ACBD6^ENSG00000230124.8 chr1:180397605:- YES_LDAS 0.0034 GT 1.6402 AG 1.9086 ["INTRACHROMOSOMAL[chr1:4.54Mb]"] RNF144A--MXD4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RNF144A^ENSG00000151692.15 chr2:6996993:+ MXD4^ENSG00000123933.17 chr4:2253346:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr4]"] RNF141--IRAG1 1 0 1.00 0.00 ONLY_REF_SPLICE RNF141^ENSG00000110315.7 chr11:10541122:- IRAG1^ENSG00000072952.19 chr11:10652182:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr11:0.03Mb]","LOCAL_REARRANGEMENT:-:[31861]"] RNF139--NDUFV3 1 0 1.00 0.00 ONLY_REF_SPLICE RNF139^ENSG00000170881.5 chr8:124475290:+ NDUFV3^ENSG00000160194.18 chr21:42908864:+ YES_LDAS 0.0034 GT 1.5219 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr21]"] RNASET2--RNGTT 1 0 1.00 0.00 ONLY_REF_SPLICE RNASET2^ENSG00000026297.16 chr6:166956097:- RNGTT^ENSG00000111880.16 chr6:88614395:- YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTRACHROMOSOMAL[chr6:77.96Mb]"] RN7SL79P--SPC24 1 0 1.00 0.00 INCL_NON_REF_SPLICE RN7SL79P^ENSG00000239595.3 chr17:31465757:+ SPC24^ENSG00000161888.11 chr19:11146740:- NO_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr17--chr19]"] RIOK3--OAS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE RIOK3^ENSG00000101782.15 chr18:23477205:+ OAS3^ENSG00000111331.14 chr12:112964096:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5329 ["INTERCHROMOSOMAL[chr18--chr12]"] RIOK2--DEPDC1B 1 0 1.00 0.00 ONLY_REF_SPLICE RIOK2^ENSG00000058729.11 chr5:97177116:- DEPDC1B^ENSG00000035499.13 chr5:60687227:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr5:36.46Mb]"] RIOK1--CCDC102A 1 0 1.00 0.00 ONLY_REF_SPLICE RIOK1^ENSG00000124784.9 chr6:7411451:+ CCDC102A^ENSG00000135736.6 chr16:57516463:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr16]"] RINT1--PEX7 1 0 1.00 0.00 ONLY_REF_SPLICE RINT1^ENSG00000135249.8 chr7:105536749:+ PEX7^ENSG00000112357.14 chr6:136866627:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr7--chr6]"] RGSL1--CMC1 1 0 1.00 0.00 ONLY_REF_SPLICE RGSL1^ENSG00000121446.20 chr1:182507266:+ CMC1^ENSG00000187118.14 chr3:28316333:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr3]"] RGS6--AC005993.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RGS6^ENSG00000182732.18 chr14:72018942:+ AC005993.1^ENSG00000266869.2 chr14:71915873:+ NO_LDAS 0.0034 GT 1.7465 AG 1.7056 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_REARRANGEMENT:+:[3833]"] RGPD1--KCNIP2 1 0 0.14 0.00 INCL_NON_REF_SPLICE RGPD1^ENSG00000187627.17 chr2:86984848:+ KCNIP2^ENSG00000120049.20 chr10:101826331:- NO_LDAS 0.0005 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr2--chr10]"] RGMA--NUP50 1 0 1.00 0.00 ONLY_REF_SPLICE RGMA^ENSG00000182175.14 chr15:93072916:- NUP50^ENSG00000093000.19 chr22:45178238:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr22]"] RFXANK--GLI2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RFXANK^ENSG00000064490.14 chr19:19198150:+ GLI2^ENSG00000074047.22 chr2:120955341:+ NO_LDAS 0.0034 GT 1.7819 AG 1.3753 ["INTERCHROMOSOMAL[chr19--chr2]"] RFX2--E2F1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RFX2^ENSG00000087903.13 chr19:6016261:- E2F1^ENSG00000101412.13 chr20:33678353:- NO_LDAS 0.0034 GT 1.9656 AG 1.5301 ["INTERCHROMOSOMAL[chr19--chr20]"] RFK--REL 1 0 1.00 0.00 ONLY_REF_SPLICE RFK^ENSG00000135002.12 chr9:76394090:- REL^ENSG00000162924.15 chr2:60920574:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr2]"] RFC1--SOX9-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RFC1^ENSG00000035928.16 chr4:39351348:- SOX9-AS1^ENSG00000234899.11 chr17:72088513:- NO_LDAS 0.0034 GT 1.5546 AG 1.9899 ["INTERCHROMOSOMAL[chr4--chr17]"] REXO4--ZCCHC24 1 0 1.00 0.00 INCL_NON_REF_SPLICE REXO4^ENSG00000148300.12 chr9:133417738:- ZCCHC24^ENSG00000165424.7 chr10:79432626:- NO_LDAS 0.0034 GT 1.0530 AG 1.2419 ["INTERCHROMOSOMAL[chr9--chr10]"] RELB--AC105460.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RELB^ENSG00000104856.14 chr19:45032749:+ AC105460.1^ENSG00000250920.3 chr4:103552148:- YES_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr4]"] RBM6--ILKAP 1 0 1.00 0.00 ONLY_REF_SPLICE RBM6^ENSG00000004534.15 chr3:49940225:+ ILKAP^ENSG00000132323.9 chr2:238194870:- YES_LDAS 0.0034 GT 1.7819 AG 1.6895 ["INTERCHROMOSOMAL[chr3--chr2]"] RBM47--AC008079.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM47^ENSG00000163694.15 chr4:40437767:- AC008079.1^ENSG00000280007.1 chr22:18114308:- NO_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr22]"] RBM46--LRAT 1 0 1.00 0.00 ONLY_REF_SPLICE RBM46^ENSG00000151962.8 chr4:154799564:+ LRAT^ENSG00000121207.12 chr4:154748189:+ NO_LDAS 0.0034 GT 1.8295 AG 1.8295 ["INTRACHROMOSOMAL[chr4:0.03Mb]","LOCAL_REARRANGEMENT:+:[28093]"] RBM44--SDF2 1 0 1.00 0.00 ONLY_REF_SPLICE RBM44^ENSG00000177483.12 chr2:237827503:+ SDF2^ENSG00000132581.10 chr17:28655483:- YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr17]"] RBM41--GRIN2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE RBM41^ENSG00000089682.16 chrX:107115862:- GRIN2A^ENSG00000183454.18 chr16:9755172:- NO_LDAS 0.0034 GT 1.8256 AG 1.5546 ["INTERCHROMOSOMAL[chrX--chr16]"] RBAK--AC092032.2 1 0 1.00 0.00 ONLY_REF_SPLICE RBAK^ENSG00000146587.18 chr7:5048091:+ AC092032.2^ENSG00000288620.1 chr7:4989063:+ YES_LDAS 0.0034 GT 1.9219 AG 1.7819 ["INTRACHROMOSOMAL[chr7:0.06Mb]","LOCAL_REARRANGEMENT:+:[56644]"] RASSF8--DCP1A 1 0 1.00 0.00 ONLY_REF_SPLICE RASSF8^ENSG00000123094.15 chr12:25995130:+ DCP1A^ENSG00000272886.6 chr3:53292827:- YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr3]"] RASSF3--TRMT11 1 0 1.00 0.00 ONLY_REF_SPLICE RASSF3^ENSG00000153179.13 chr12:64610743:+ TRMT11^ENSG00000066651.20 chr6:125995967:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr6]"] RASSF3--NPIPB2 1 0 1.00 0.00 ONLY_REF_SPLICE RASSF3^ENSG00000153179.13 chr12:64684894:+ NPIPB2^ENSG00000234719.9 chr16:11937668:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr16]"] RASA1--NUDT12 1 0 1.00 0.00 ONLY_REF_SPLICE RASA1^ENSG00000145715.15 chr5:87338091:+ NUDT12^ENSG00000112874.10 chr5:103550971:- YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr5:16.16Mb]"] RARS2--ZWILCH 1 0 1.00 0.00 ONLY_REF_SPLICE RARS2^ENSG00000146282.18 chr6:87529542:- ZWILCH^ENSG00000174442.12 chr15:66535933:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr15]"] RAPGEF6--LYRM7 1 0 1.00 0.00 ONLY_REF_SPLICE RAPGEF6^ENSG00000158987.22 chr5:131592383:- LYRM7^ENSG00000186687.16 chr5:131199531:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTRACHROMOSOMAL[chr5:0.22Mb]"] RAPGEF5--ZAN 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAPGEF5^ENSG00000136237.19 chr7:22162397:- ZAN^ENSG00000146839.19 chr7:100737021:+ NO_LDAS 0.0034 GT 1.4295 AG 1.9656 ["INTRACHROMOSOMAL[chr7:78.38Mb]"] RAMP1--UBE2F 1 0 1.00 0.00 ONLY_REF_SPLICE RAMP1^ENSG00000132329.11 chr2:237877362:+ UBE2F^ENSG00000184182.19 chr2:237973092:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8323 ["INTRACHROMOSOMAL[chr2:0.05Mb]","NEIGHBORS[54721]"] RALA--CREBL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RALA^ENSG00000006451.8 chr7:39706352:+ CREBL2^ENSG00000111269.3 chr12:12637570:+ YES_LDAS 0.0034 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr12]"] RAD54L--ANKRD36C 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAD54L^ENSG00000085999.13 chr1:46260099:+ ANKRD36C^ENSG00000174501.14 chr2:95906822:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr2]"] RAD52--CPSF4 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAD52^ENSG00000002016.18 chr12:916296:- CPSF4^ENSG00000160917.15 chr7:99454044:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr7]"] RAD51--DPH5 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAD51^ENSG00000051180.17 chr15:40731157:+ DPH5^ENSG00000117543.21 chr1:101001544:- YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr1]"] RAD18--OXTR 1 0 1.00 0.00 ONLY_REF_SPLICE RAD18^ENSG00000070950.10 chr3:8898894:- OXTR^ENSG00000180914.11 chr3:8753224:- YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[5774]"] RABL3--LINC02614 1 0 1.00 0.00 ONLY_REF_SPLICE RABL3^ENSG00000144840.10 chr3:120730696:- LINC02614^ENSG00000241288.8 chr3:125827455:- YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr3:5.08Mb]"] RABEPK--DNAJC8 1 0 1.00 0.00 INCL_NON_REF_SPLICE RABEPK^ENSG00000136933.17 chr9:125232745:+ DNAJC8^ENSG00000126698.11 chr1:28220895:- YES_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr9--chr1]"] RABEPK--AP001042.1 1 0 1.00 0.00 ONLY_REF_SPLICE RABEPK^ENSG00000136933.17 chr9:125228059:+ AP001042.1^ENSG00000205622.11 chr21:38917400:- NO_LDAS 0.0034 GT 1.8323 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr21]"] RAB8B--DENND4A 1 0 1.00 0.00 ONLY_REF_SPLICE RAB8B^ENSG00000166128.13 chr15:63189748:+ DENND4A^ENSG00000174485.16 chr15:65761438:- YES_LDAS 0.0034 GT 1.7465 AG 1.5301 ["INTRACHROMOSOMAL[chr15:2.39Mb]"] RAB6B--FCHO2 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB6B^ENSG00000154917.11 chr3:133834575:- FCHO2^ENSG00000157107.14 chr5:73087882:+ YES_LDAS 0.0034 GT 1.2310 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chr5]"] RAB6B--ABRACL 1 0 1.00 0.00 ONLY_REF_SPLICE RAB6B^ENSG00000154917.11 chr3:133838166:- ABRACL^ENSG00000146386.8 chr6:139042719:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr6]"] RAB5A--AC092747.2 1 0 0.50 0.00 ONLY_REF_SPLICE RAB5A^ENSG00000144566.11 chr3:19951061:+ AC092747.2^ENSG00000256625.1 chr12:27139966:+ YES_LDAS 0.0017 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr12]"] RAB40B--ZDHHC11B 1 0 1.00 0.00 ONLY_REF_SPLICE RAB40B^ENSG00000141542.11 chr17:82698455:- ZDHHC11B^ENSG00000206077.14 chr5:766919:- YES_LDAS 0.0034 GT 1.4295 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr5]"] RAB38--AP000676.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE RAB38^ENSG00000123892.12 chr11:88149675:- AP000676.5^ENSG00000285835.1 chr11:87964709:- YES_LDAS 0.0034 GT 1.6729 AG 1.8295 ["INTRACHROMOSOMAL[chr11:0.07Mb]","NEIGHBORS[67643]"] RAB18--RASA1 1 0 0.50 0.00 ONLY_REF_SPLICE RAB18^ENSG00000099246.17 chr10:27509930:+ RASA1^ENSG00000145715.15 chr5:87331348:+ NO_LDAS 0.0017 GT 1.9219 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr5]"] RAB18--MRPS10 1 0 1.00 0.00 ONLY_REF_SPLICE RAB18^ENSG00000099246.17 chr10:27509930:+ MRPS10^ENSG00000048544.6 chr6:42214344:- YES_LDAS 0.0034 GT 1.9219 AG 1.5219 ["INTERCHROMOSOMAL[chr10--chr6]"] RAB18--LINC02680 1 0 1.00 0.00 ONLY_REF_SPLICE RAB18^ENSG00000099246.17 chr10:27509930:+ LINC02680^ENSG00000285737.1 chr10:27578371:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["INTRACHROMOSOMAL[chr10:0.02Mb]","NEIGHBORS[22191]"] QTRT1--KCNC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE QTRT1^ENSG00000213339.9 chr19:10707382:+ KCNC1^ENSG00000129159.9 chr11:17736453:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr11]"] PXYLP1--GK5 1 0 1.00 0.00 ONLY_REF_SPLICE PXYLP1^ENSG00000155893.13 chr3:141262340:+ GK5^ENSG00000175066.16 chr3:142204788:- YES_LDAS 0.0034 GT 1.9086 AG 1.5546 ["INTRACHROMOSOMAL[chr3:0.79Mb]"] PXMP2--AACS 1 0 1.00 0.00 INCL_NON_REF_SPLICE PXMP2^ENSG00000176894.10 chr12:132701369:+ AACS^ENSG00000081760.17 chr12:125135791:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr12:7.54Mb]"] PXK--KAT2B 1 0 1.00 0.00 ONLY_REF_SPLICE PXK^ENSG00000168297.16 chr3:58412963:+ KAT2B^ENSG00000114166.8 chr3:20152332:+ NO_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTRACHROMOSOMAL[chr3:38.18Mb]"] PUSL1--SLC35E2A 1 0 0.50 0.00 ONLY_REF_SPLICE PUSL1^ENSG00000169972.12 chr1:1308720:+ SLC35E2A^ENSG00000215790.8 chr1:1739704:- YES_LDAS 0.0017 GT 1.9899 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.41Mb]"] PUS7--CHMP4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE PUS7^ENSG00000091127.14 chr7:105470688:- CHMP4A^ENSG00000254505.11 chr14:24211491:- YES_LDAS 0.0034 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr14]"] PTTG1--TMPO 1 0 1.00 0.00 ONLY_REF_SPLICE PTTG1^ENSG00000164611.13 chr5:160422403:+ TMPO^ENSG00000120802.14 chr12:98537475:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr12]"] PTS--NQO2 1 0 1.00 0.00 ONLY_REF_SPLICE PTS^ENSG00000150787.8 chr11:112226526:+ NQO2^ENSG00000124588.22 chr6:3006468:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr11--chr6]"] PTPRN2--PTPRN 1 0 1.00 0.00 ONLY_REF_SPLICE PTPRN2^ENSG00000155093.19 chr7:157568902:- PTPRN^ENSG00000054356.14 chr2:219296345:- NO_LDAS 0.0034 GT 1.7465 AG 1.6729 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr7--chr2]"] PTPN9--SNUPN 1 0 1.00 0.00 ONLY_REF_SPLICE PTPN9^ENSG00000169410.10 chr15:75517259:- SNUPN^ENSG00000169371.14 chr15:75621056:- YES_LDAS 0.0034 GT 1.9656 AG 1.4295 ["INTRACHROMOSOMAL[chr15:0.02Mb]","LOCAL_REARRANGEMENT:-:[18768]"] PTK6--RNF121 1 0 1.00 0.00 ONLY_REF_SPLICE PTK6^ENSG00000101213.7 chr20:63533551:- RNF121^ENSG00000137522.18 chr11:71994719:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr20--chr11]"] PTGR2--FOXN2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTGR2^ENSG00000140043.11 chr14:73879305:+ FOXN2^ENSG00000170802.16 chr2:48378856:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr2]"] PTAR1--OR51G2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PTAR1^ENSG00000188647.13 chr9:69759853:- OR51G2^ENSG00000176893.5 chr11:4915098:- NO_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr11]"] PSTPIP2--ITPKB 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSTPIP2^ENSG00000152229.18 chr18:45991902:- ITPKB^ENSG00000143772.9 chr1:226631838:- NO_LDAS 0.0034 GT 1.9899 AG 1.4566 ["INTERCHROMOSOMAL[chr18--chr1]"] PSTK--LINC-PINT 1 0 1.00 0.00 ONLY_REF_SPLICE PSTK^ENSG00000179988.15 chr10:122983470:+ LINC-PINT^ENSG00000231721.7 chr7:130945835:- YES_LDAS 0.0034 GT 1.8892 AG 1.5329 ["INTERCHROMOSOMAL[chr10--chr7]"] PSORS1C1--DGKH 1 0 1.00 0.00 ONLY_REF_SPLICE PSORS1C1^ENSG00000204540.11 chr6:31114891:+ DGKH^ENSG00000102780.17 chr13:42129552:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr6--chr13]"] PSMD7--PM20D2 1 0 1.00 0.00 ONLY_REF_SPLICE PSMD7^ENSG00000103035.11 chr16:74301652:+ PM20D2^ENSG00000146281.6 chr6:89149265:+ NO_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr16--chr6]"] PSMD12--AC103764.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMD12^ENSG00000197170.10 chr17:67366412:- AC103764.1^ENSG00000251218.1 chr8:134851563:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7232 ["INTERCHROMOSOMAL[chr17--chr8]"] PSMC1--KREMEN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PSMC1^ENSG00000100764.14 chr14:90259193:+ KREMEN1^ENSG00000183762.13 chr22:29144956:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr22]"] PSEN2--ABCB10 1 0 1.00 0.00 ONLY_REF_SPLICE PSEN2^ENSG00000143801.18 chr1:226889049:+ ABCB10^ENSG00000135776.5 chr1:229531731:- YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTRACHROMOSOMAL[chr1:2.59Mb]"] PRR5--HECW2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRR5^ENSG00000186654.21 chr22:44726634:+ HECW2^ENSG00000138411.13 chr2:196240494:- NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr22--chr2]"] PRR14--HYAL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRR14^ENSG00000156858.12 chr16:30656180:+ HYAL2^ENSG00000068001.14 chr3:50319942:- YES_LDAS 0.0034 GC 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr3]"] PRPF4--OTULINL 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRPF4^ENSG00000136875.13 chr9:113282711:+ OTULINL^ENSG00000145569.6 chr5:14581799:+ NO_LDAS 0.0034 GT 1.3996 AG 1.4566 ["INTERCHROMOSOMAL[chr9--chr5]"] PRPF39--MAP4K5 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRPF39^ENSG00000185246.18 chr14:45114950:+ MAP4K5^ENSG00000012983.11 chr14:50468771:- YES_LDAS 0.0034 GT 1.8256 AG 1.9086 ["INTRACHROMOSOMAL[chr14:5.30Mb]"] PRPF38A--KDM4E 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRPF38A^ENSG00000134748.13 chr1:52412624:+ KDM4E^ENSG00000235268.2 chr11:95026625:+ NO_LDAS 0.0034 GT 1.2729 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr11]"] PRKAR1B--ZNF18 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRKAR1B^ENSG00000188191.15 chr7:727590:- ZNF18^ENSG00000154957.14 chr17:11992517:- YES_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr17]"] PRKACB--KCNQ4 1 0 1.00 0.00 ONLY_REF_SPLICE PRKACB^ENSG00000142875.19 chr1:84078371:+ KCNQ4^ENSG00000117013.17 chr1:40817265:+ YES_LDAS 0.0034 GT 1.5546 AG 1.5546 ["INTRACHROMOSOMAL[chr1:43.24Mb]"] PRKAA1--AC113385.3 1 0 0.07 0.00 ONLY_REF_SPLICE PRKAA1^ENSG00000132356.11 chr5:40798063:- AC113385.3^ENSG00000275374.1 chr5:100381398:- YES_LDAS 0.0002 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr5:59.58Mb]"] PRIM2--CMTM3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRIM2^ENSG00000146143.19 chr6:57318480:+ CMTM3^ENSG00000140931.20 chr16:66609883:+ YES_LDAS 0.0034 GT 1.6402 AG 1.3383 ["INTERCHROMOSOMAL[chr6--chr16]"] PRH1--ITPR2 1 0 1.00 0.00 ONLY_REF_SPLICE PRH1^ENSG00000231887.7 chr12:10973655:- ITPR2^ENSG00000123104.12 chr12:26387594:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTRACHROMOSOMAL[chr12:15.16Mb]"] PRH1--ERGIC2 1 0 1.00 0.00 ONLY_REF_SPLICE PRH1^ENSG00000231887.7 chr12:11171422:- ERGIC2^ENSG00000087502.18 chr12:29371670:- YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTRACHROMOSOMAL[chr12:18.17Mb]"] PRELID3A--COG7 1 0 1.00 0.00 ONLY_REF_SPLICE PRELID3A^ENSG00000141391.14 chr18:12422341:+ COG7^ENSG00000168434.13 chr16:23434718:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr18--chr16]"] PRDX6-AS1--TNFSF4 1 0 1.00 0.00 ONLY_REF_SPLICE PRDX6-AS1^ENSG00000203739.4 chr1:173460378:- TNFSF4^ENSG00000117586.11 chr1:173188569:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.21Mb]"] PRDX6-AS1--TNFSF4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDX6-AS1^ENSG00000203739.4 chr1:173476632:- TNFSF4^ENSG00000117586.11 chr1:173207185:- NO_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chr1:0.21Mb]"] PRDM5--STXBP5L 1 0 1.00 0.00 INCL_NON_REF_SPLICE PRDM5^ENSG00000138738.11 chr4:120818349:- STXBP5L^ENSG00000145087.13 chr3:121422522:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr3]"] PRCP--AASDHPPT 1 0 1.00 0.00 ONLY_REF_SPLICE PRCP^ENSG00000137509.12 chr11:82900235:- AASDHPPT^ENSG00000149313.11 chr11:106079467:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr11:23.10Mb]"] PPWD1--PLCB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPWD1^ENSG00000113593.12 chr5:65563421:+ PLCB1^ENSG00000182621.18 chr20:8628361:+ YES_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr20]"] PPT2--AL031595.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPT2^ENSG00000221988.13 chr6:32157924:+ AL031595.3^ENSG00000280434.1 chr22:44151887:+ NO_LDAS 0.0034 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr6--chr22]"] PPP1R7--SLC44A4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPP1R7^ENSG00000115685.15 chr2:241182717:+ SLC44A4^ENSG00000204385.13 chr6:31863742:- NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr6]"] PPP1R14C--TSC22D4 1 0 0.33 0.00 INCL_NON_REF_SPLICE PPP1R14C^ENSG00000198729.5 chr6:150143405:+ TSC22D4^ENSG00000166925.9 chr7:100478281:- NO_LDAS 0.0011 GT 1.5301 AG 1.5656 ["INTERCHROMOSOMAL[chr6--chr7]"] PPM1L--NMD3 1 0 1.00 0.00 ONLY_REF_SPLICE PPM1L^ENSG00000163590.14 chr3:160961910:+ NMD3^ENSG00000169251.13 chr3:161156971:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.03Mb]","NEIGHBORS[25794]"] PPIP5K1--CATSPER2P1 1 0 1.00 0.00 ONLY_REF_SPLICE PPIP5K1^ENSG00000168781.22 chr15:43564867:- CATSPER2P1^ENSG00000205771.6 chr15:43745170:- NO_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr15:0.14Mb]"] PPIH--DESI1 1 0 1.00 0.00 ONLY_REF_SPLICE PPIH^ENSG00000171960.12 chr1:42663543:+ DESI1^ENSG00000100418.8 chr22:41604153:- NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr22]"] PPHLN1--MLH3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PPHLN1^ENSG00000134283.18 chr12:42393689:+ MLH3^ENSG00000119684.16 chr14:75046589:- YES_LDAS 0.0034 GT 1.8062 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr14]"] PPARD--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE PPARD^ENSG00000112033.14 chr6:35347150:+ PCCA^ENSG00000175198.17 chr13:100330561:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr13]"] POLR3G--UPF3A 1 0 0.50 0.00 ONLY_REF_SPLICE POLR3G^ENSG00000113356.13 chr5:90506674:+ UPF3A^ENSG00000169062.15 chr13:114298840:+ YES_LDAS 0.0017 GT 1.2729 AG 1.8062 ["INTERCHROMOSOMAL[chr5--chr13]"] POLE4--AC007681.1 1 0 1.00 0.00 ONLY_REF_SPLICE POLE4^ENSG00000115350.12 chr2:74960146:+ AC007681.1^ENSG00000270571.2 chr2:75186830:+ YES_LDAS 0.0034 GT 1.7968 AG 1.6402 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.18Mb]"] POLD3--RNF169 1 0 1.00 0.00 INCL_NON_REF_SPLICE POLD3^ENSG00000077514.9 chr11:74640841:+ RNF169^ENSG00000166439.6 chr11:74789626:+ YES_LDAS 0.0034 GT 1.5219 AG 1.8323 ["ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.08Mb]","NEIGHBORS[79732]"] POLA1--NDUFV2 1 0 1.00 0.00 ONLY_REF_SPLICE POLA1^ENSG00000101868.13 chrX:24699549:+ NDUFV2^ENSG00000178127.13 chr18:9126831:+ NO_LDAS 0.0034 GT 1.3383 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr18]"] POGLUT3--NPIPB10P 1 0 0.08 0.00 ONLY_REF_SPLICE POGLUT3^ENSG00000178202.13 chr11:108478024:- NPIPB10P^ENSG00000196796.5 chr16:29050502:+ NO_LDAS 0.0003 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr16]"] POGK--TXNRD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE POGK^ENSG00000143157.12 chr1:166850268:+ TXNRD3^ENSG00000197763.20 chr3:126646207:- NO_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr3]"] POFUT1--IFFO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE POFUT1^ENSG00000101346.14 chr20:32234577:+ IFFO1^ENSG00000010295.20 chr12:6555287:- NO_LDAS 0.0034 GT 1.5628 AG 1.5546 ["INTERCHROMOSOMAL[chr20--chr12]"] PMS2P12--AC004980.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE PMS2P12^ENSG00000228546.2 chr7:102339115:+ AC004980.4^ENSG00000250778.1 chr7:76521943:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9086 ["INTRACHROMOSOMAL[chr7:25.82Mb]"] PLGLA--AC083899.1 1 0 0.25 0.00 ONLY_REF_SPLICE PLGLA^ENSG00000240935.6 chr2:106391020:+ AC083899.1^ENSG00000204745.4 chr2:87138256:+ NO_LDAS 0.0008 GT 1.8295 AG 1.8295 ["INTRACHROMOSOMAL[chr2:19.19Mb]"] PLEKHN1--EMSY 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLEKHN1^ENSG00000187583.11 chr1:973256:+ EMSY^ENSG00000158636.16 chr11:76496361:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr11]"] PLEK2--MRPS21 1 0 1.00 0.00 ONLY_REF_SPLICE PLEK2^ENSG00000100558.9 chr14:67412018:- MRPS21^ENSG00000266472.6 chr1:150308048:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr1]"] PLCL2--GRM7 1 0 1.00 0.00 ONLY_REF_SPLICE PLCL2^ENSG00000154822.18 chr3:16885366:+ GRM7^ENSG00000196277.16 chr3:7146452:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:9.06Mb]"] PLCB1--PLCB4 1 0 1.00 0.00 ONLY_REF_SPLICE PLCB1^ENSG00000182621.18 chr20:8790261:+ PLCB4^ENSG00000101333.18 chr20:9468571:+ YES_LDAS 0.0034 GT 1.7465 AG 1.5329 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr20:0.10Mb]"] PLA2G12A--NECAB3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PLA2G12A^ENSG00000123739.11 chr4:109712956:- NECAB3^ENSG00000125967.17 chr20:33674386:- YES_LDAS 0.0034 GT 1.8892 AG 1.5301 ["INTERCHROMOSOMAL[chr4--chr20]"] PKIB--SERINC1 1 0 1.00 0.00 ONLY_REF_SPLICE PKIB^ENSG00000135549.15 chr6:122610535:+ SERINC1^ENSG00000111897.7 chr6:122458681:- YES_LDAS 0.0034 GT 1.6895 AG 1.8295 ["INTRACHROMOSOMAL[chr6:0.00Mb]","LOCAL_INVERSION:+:-:[127]"] PKD1P6--AP000944.2 1 0 0.14 0.00 INCL_NON_REF_SPLICE PKD1P6^ENSG00000250251.6 chr16:15137754:- AP000944.2^ENSG00000277599.1 chr11:65423963:+ NO_LDAS 0.0005 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr16--chr11]"] PIR--OFD1 1 0 1.00 0.00 ONLY_REF_SPLICE PIR^ENSG00000087842.11 chrX:15491162:- OFD1^ENSG00000046651.15 chrX:13735248:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTRACHROMOSOMAL[chrX:1.62Mb]"] PIP4P2--NDUFAF6 1 0 1.00 0.00 ONLY_REF_SPLICE PIP4P2^ENSG00000155099.8 chr8:91008743:- NDUFAF6^ENSG00000156170.13 chr8:95031995:+ YES_LDAS 0.0034 GT 1.5546 AG 1.7819 ["INTRACHROMOSOMAL[chr8:3.85Mb]"] PIP4K2A--PARG 1 0 0.50 0.00 ONLY_REF_SPLICE PIP4K2A^ENSG00000150867.14 chr10:22714183:- PARG^ENSG00000227345.9 chr10:49879830:- YES_LDAS 0.0017 GT 1.9329 AG 1.7465 ["INTRACHROMOSOMAL[chr10:27.10Mb]"] PINX1--RP1L1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PINX1^ENSG00000254093.9 chr8:10820193:- RP1L1^ENSG00000183638.6 chr8:10678251:- YES_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr8:0.05Mb]","NEIGHBORS[52774]"] PIGZ--ANKIB1 1 0 1.00 0.00 ONLY_REF_SPLICE PIGZ^ENSG00000119227.8 chr3:196951821:- ANKIB1^ENSG00000001629.10 chr7:92294889:+ YES_LDAS 0.0034 GT 1.8295 AG 1.5656 ["INTERCHROMOSOMAL[chr3--chr7]"] PIGF--CFAP70 1 0 1.00 0.00 ONLY_REF_SPLICE PIGF^ENSG00000151665.13 chr2:46592475:- CFAP70^ENSG00000156042.18 chr10:73299101:- NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr2--chr10]"] PIBF1--DTWD1 1 0 1.00 0.00 ONLY_REF_SPLICE PIBF1^ENSG00000083535.16 chr13:72965404:+ DTWD1^ENSG00000104047.15 chr15:49634536:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7232 ["INTERCHROMOSOMAL[chr13--chr15]"] PHKA2--PDHA1 1 0 1.00 0.00 ONLY_REF_SPLICE PHKA2^ENSG00000044446.12 chrX:18943710:- PDHA1^ENSG00000131828.14 chrX:19349312:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTRACHROMOSOMAL[chrX:0.36Mb]"] PGM5--GSDMB 1 0 1.00 0.00 ONLY_REF_SPLICE PGM5^ENSG00000154330.13 chr9:68479553:+ GSDMB^ENSG00000073605.18 chr17:39909924:- YES_LDAS 0.0034 GT 1.9329 AG 1.5628 ["INTERCHROMOSOMAL[chr9--chr17]"] PGLS--GAPDHP72 1 0 1.00 0.00 INCL_NON_REF_SPLICE PGLS^ENSG00000130313.7 chr19:17511960:+ GAPDHP72^ENSG00000216624.3 chr6:166064249:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr19--chr6]"] PFDN4--RUNDC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PFDN4^ENSG00000101132.10 chr20:54208167:+ RUNDC1^ENSG00000198863.7 chr17:42991543:+ YES_LDAS 0.0034 AT 1.2729 AC 1.8892 ["INTERCHROMOSOMAL[chr20--chr17]"] PEG10--COPS7A 1 0 1.00 0.00 INCL_NON_REF_SPLICE PEG10^ENSG00000242265.6 chr7:94664123:+ COPS7A^ENSG00000111652.10 chr12:6729358:+ YES_LDAS 0.0034 AT 1.9086 AC 1.5656 ["INTERCHROMOSOMAL[chr7--chr12]"] PDXP--STXBP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDXP^ENSG00000241360.2 chr22:37665796:+ STXBP3^ENSG00000116266.11 chr1:108807436:+ YES_LDAS 0.0034 GC 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr22--chr1]"] PDSS2--SNX3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDSS2^ENSG00000164494.12 chr6:107459133:- SNX3^ENSG00000112335.15 chr6:108223045:- YES_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chr6:0.75Mb]"] PDHA1--ERLEC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDHA1^ENSG00000131828.14 chrX:19350081:+ ERLEC1^ENSG00000068912.14 chr2:53794373:+ YES_LDAS 0.0034 GT 1.6402 AG 1.7056 ["INTERCHROMOSOMAL[chrX--chr2]"] PDGFA--PRKAR1B 1 0 1.00 0.00 ONLY_REF_SPLICE PDGFA^ENSG00000197461.13 chr7:518939:- PRKAR1B^ENSG00000188191.15 chr7:711527:- YES_LDAS 0.0034 GT 1.9329 AG 1.5656 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:-:[28901]"] PDE5A--ARHGAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PDE5A^ENSG00000138735.16 chr4:119516961:- ARHGAP1^ENSG00000175220.12 chr11:46677675:- YES_LDAS 0.0034 AT 1.9899 AC 1.7465 ["INTERCHROMOSOMAL[chr4--chr11]"] PDCD4--COX17 1 0 0.50 0.00 INCL_NON_REF_SPLICE PDCD4^ENSG00000150593.18 chr10:110875989:+ COX17^ENSG00000138495.7 chr3:119675233:- YES_LDAS 0.0017 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr3]"] PDCD2L--FRG1CP 1 0 0.50 0.00 ONLY_REF_SPLICE PDCD2L^ENSG00000126249.8 chr19:34413847:+ FRG1CP^ENSG00000282826.2 chr20:28591519:- YES_LDAS 0.0017 GT 1.8062 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr20]"] PDC-AS1--ODR4 1 0 1.00 0.00 ONLY_REF_SPLICE PDC-AS1^ENSG00000229739.4 chr1:186436573:+ ODR4^ENSG00000157181.16 chr1:186406083:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7465 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:+:[2103]"] PCSK4--GHRL 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCSK4^ENSG00000115257.15 chr19:1483939:- GHRL^ENSG00000157017.16 chr3:10289823:- NO_LDAS 0.0034 GT 1.0530 AG 1.4295 ["INTERCHROMOSOMAL[chr19--chr3]"] PCNP--EDRF1-DT 1 0 1.00 0.00 ONLY_REF_SPLICE PCNP^ENSG00000081154.12 chr3:101574279:+ EDRF1-DT^ENSG00000224023.10 chr10:125709567:- YES_LDAS 0.0034 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr10]"] PCLO--AC016065.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCLO^ENSG00000186472.20 chr7:83134250:- AC016065.1^ENSG00000246089.3 chr8:6404527:- NO_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr8]"] PCDHGB2--ADGRV1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCDHGB2^ENSG00000253910.2 chr5:141362556:+ ADGRV1^ENSG00000164199.18 chr5:90720935:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTRACHROMOSOMAL[chr5:50.20Mb]"] PCDHGB1--PCDHGA10 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCDHGB1^ENSG00000254221.2 chr5:141352669:+ PCDHGA10^ENSG00000253846.2 chr5:141494807:+ NO_LDAS 0.0034 GT 1.6895 AG 1.3383 ["DGD_PARALOGS","HGNC_GENEFAM","INTRACHROMOSOMAL[chr5:0.06Mb]","NEIGHBORS[60294]"] PCDH7--LINC02497 1 0 1.00 0.00 ONLY_REF_SPLICE PCDH7^ENSG00000169851.15 chr4:30920369:+ LINC02497^ENSG00000251182.2 chr4:31176621:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7819 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr4:0.02Mb]","NEIGHBORS[24208]"] PCCA--CLYBL 1 0 1.00 0.00 ONLY_REF_SPLICE PCCA^ENSG00000175198.17 chr13:100157340:+ CLYBL^ENSG00000125246.15 chr13:99858861:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["YOSHIHARA_TCGA","Klijn_CellLines","GUO2018CR_TCGA","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr13:0.19Mb]"] PCBP4--C19orf48 1 0 1.00 0.00 ONLY_REF_SPLICE PCBP4^ENSG00000090097.22 chr3:51958790:- C19orf48^ENSG00000167747.15 chr19:50802257:- NO_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr19]"] PCAT1--LGALS8 1 0 1.00 0.00 INCL_NON_REF_SPLICE PCAT1^ENSG00000253438.4 chr8:126557266:+ LGALS8^ENSG00000116977.19 chr1:236541696:+ YES_LDAS 0.0034 GT 1.6402 AG 1.3710 ["INTERCHROMOSOMAL[chr8--chr1]"] PC--FMNL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PC^ENSG00000173599.15 chr11:66871052:- FMNL1^ENSG00000184922.14 chr17:45241493:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5329 ["INTERCHROMOSOMAL[chr11--chr17]"] PBX3--MB 1 0 1.00 0.00 ONLY_REF_SPLICE PBX3^ENSG00000167081.18 chr9:125778103:+ MB^ENSG00000198125.13 chr22:35617265:- YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr22]"] PARP8--RASA1 1 0 1.00 0.00 ONLY_REF_SPLICE PARP8^ENSG00000151883.19 chr5:50668125:+ RASA1^ENSG00000145715.15 chr5:87331348:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr5:36.42Mb]"] PARN--THUMPD1 1 0 0.50 0.00 ONLY_REF_SPLICE PARN^ENSG00000140694.17 chr16:14599904:- THUMPD1^ENSG00000066654.14 chr16:20739071:- NO_LDAS 0.0017 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr16:6.07Mb]"] PARN--RNF38 1 0 1.00 0.00 ONLY_REF_SPLICE PARN^ENSG00000140694.17 chr16:14578531:- RNF38^ENSG00000137075.18 chr9:36376127:- NO_LDAS 0.0034 GC 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr9]"] PARM1--PAK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PARM1^ENSG00000169116.11 chr4:74933370:+ PAK1^ENSG00000149269.10 chr11:77397045:- NO_LDAS 0.0034 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr4--chr11]"] PARG--TIMM23 1 0 1.00 0.00 ONLY_REF_SPLICE PARG^ENSG00000227345.9 chr10:49941509:- TIMM23^ENSG00000265354.4 chr10:45975454:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr10:3.81Mb]"] PARD6G--ZCCHC2 1 0 1.00 0.00 ONLY_REF_SPLICE PARD6G^ENSG00000178184.16 chr18:80202710:- ZCCHC2^ENSG00000141664.10 chr18:62539681:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr18:17.57Mb]"] PARD6G--FHOD3 1 0 1.00 0.00 ONLY_REF_SPLICE PARD6G^ENSG00000178184.16 chr18:80202710:- FHOD3^ENSG00000134775.15 chr18:36576451:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr18:43.38Mb]"] PAQR3--PAOX 1 0 1.00 0.00 ONLY_REF_SPLICE PAQR3^ENSG00000163291.14 chr4:78939040:- PAOX^ENSG00000148832.16 chr10:133388956:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr4--chr10]"] PAPOLG--AC026124.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE PAPOLG^ENSG00000115421.13 chr2:60782774:+ AC026124.1^ENSG00000250280.2 chr12:65285963:+ NO_LDAS 0.0034 GT 1.8295 AG 1.5058 ["INTERCHROMOSOMAL[chr2--chr12]"] PAM16--TXNL4A 1 0 1.00 0.00 ONLY_REF_SPLICE PAM16^ENSG00000217930.8 chr16:4351232:- TXNL4A^ENSG00000141759.15 chr18:79977701:- YES_LDAS 0.0034 GT 1.8892 AG 1.7056 ["INTERCHROMOSOMAL[chr16--chr18]"] PAIP2--AP001636.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE PAIP2^ENSG00000120727.13 chr5:139363926:+ AP001636.3^ENSG00000255240.6 chr11:59048410:- NO_LDAS 0.0034 GT 1.8295 AG 0.8366 ["INTERCHROMOSOMAL[chr5--chr11]"] PACRGL--RFX3 1 0 1.00 0.00 ONLY_REF_SPLICE PACRGL^ENSG00000163138.19 chr4:20727397:+ RFX3^ENSG00000080298.15 chr9:3293258:- NO_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr9]"] PABPC1P3--PABPC1P12 1 0 0.14 0.00 INCL_NON_REF_SPLICE PABPC1P3^ENSG00000230673.3 chrX:74583103:- PABPC1P12^ENSG00000225638.1 chr10:38638030:+ NO_LDAS 0.0005 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr10]"] P4HA2--SMAD9 1 0 1.00 0.00 INCL_NON_REF_SPLICE P4HA2^ENSG00000072682.20 chr5:132227586:- SMAD9^ENSG00000120693.14 chr13:36872842:- YES_LDAS 0.0034 GT 1.8062 AG 1.7232 ["INTERCHROMOSOMAL[chr5--chr13]"] P3H3--ADA 1 0 1.00 0.00 INCL_NON_REF_SPLICE P3H3^ENSG00000110811.20 chr12:6839413:+ ADA^ENSG00000196839.13 chr20:44620905:- NO_LDAS 0.0034 GT 1.5656 AG 1.7056 ["INTERCHROMOSOMAL[chr12--chr20]"] OXR1--LINC01425 1 0 1.00 0.00 ONLY_REF_SPLICE OXR1^ENSG00000164830.19 chr8:106679292:+ LINC01425^ENSG00000233997.5 chr21:21748395:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr21]"] OVGP1--WDR77 1 0 1.00 0.00 ONLY_REF_SPLICE OVGP1^ENSG00000085465.13 chr1:111423543:- WDR77^ENSG00000116455.14 chr1:111444124:- YES_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:-:[12155]"] OSTF1P1--ACVR1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE OSTF1P1^ENSG00000258244.1 chr12:114588465:+ ACVR1B^ENSG00000135503.13 chr12:51994018:+ NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr12:62.59Mb]"] OSMR-AS1--CSNK1G1 1 0 1.00 0.00 ONLY_REF_SPLICE OSMR-AS1^ENSG00000249740.3 chr5:38845668:- CSNK1G1^ENSG00000169118.18 chr15:64216713:- YES_LDAS 0.0034 GT 1.5656 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr15]"] OSBPL6--ZIC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE OSBPL6^ENSG00000079156.17 chr2:178306286:+ ZIC4^ENSG00000174963.18 chr3:147405719:- NO_LDAS 0.0034 GT 1.6895 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr3]"] OSBPL11--NFKBIZ 1 0 1.00 0.00 ONLY_REF_SPLICE OSBPL11^ENSG00000144909.8 chr3:125582910:- NFKBIZ^ENSG00000144802.11 chr3:101854578:+ YES_LDAS 0.0034 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr3:23.67Mb]"] ORC5--UPF3A 1 0 1.00 0.00 ONLY_REF_SPLICE ORC5^ENSG00000164815.11 chr7:104188251:- UPF3A^ENSG00000169062.15 chr13:114298840:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr7--chr13]"] ORC5--PUS7 1 0 1.00 0.00 ONLY_REF_SPLICE ORC5^ENSG00000164815.11 chr7:104161072:- PUS7^ENSG00000091127.14 chr7:105482440:- YES_LDAS 0.0034 GT 1.7465 AG 1.7232 ["INTRACHROMOSOMAL[chr7:1.23Mb]"] ORC5--ARMC10 1 0 1.00 0.00 ONLY_REF_SPLICE ORC5^ENSG00000164815.11 chr7:104161072:- ARMC10^ENSG00000170632.14 chr7:103097277:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8256 ["INTRACHROMOSOMAL[chr7:1.03Mb]"] OR5AK2--AL136295.17 1 0 1.00 0.00 INCL_NON_REF_SPLICE OR5AK2^ENSG00000181273.2 chr11:56988978:+ AL136295.17^ENSG00000287765.1 chr14:24189460:+ NO_LDAS 0.0034 GT 1.9656 AG 0.9183 ["INTERCHROMOSOMAL[chr11--chr14]"] OR52D1--ATP6AP2 1 0 0.25 0.00 INCL_NON_REF_SPLICE OR52D1^ENSG00000181609.5 chr11:5489697:+ ATP6AP2^ENSG00000182220.15 chrX:40589573:+ NO_LDAS 0.0008 GT 1.3383 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chrX]"] OR51I2--MST1 1 0 1.00 0.00 INCL_NON_REF_SPLICE OR51I2^ENSG00000187918.5 chr11:5453927:+ MST1^ENSG00000173531.15 chr3:49688203:- YES_LDAS 0.0034 GT 1.9086 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr3]"] OPA1--AL162393.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE OPA1^ENSG00000198836.11 chr3:193643618:+ AL162393.1^ENSG00000232905.2 chr9:113850794:- NO_LDAS 0.0011 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr9]"] OFD1--ZBED1 1 0 1.00 0.00 ONLY_REF_SPLICE OFD1^ENSG00000046651.15 chrX:13755242:+ ZBED1^ENSG00000214717.12 chrX:2490769:- YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chrX:11.23Mb]"] NUDCD3--ISM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUDCD3^ENSG00000015676.18 chr7:44485008:- ISM2^ENSG00000100593.18 chr14:77475222:- NO_LDAS 0.0034 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr14]"] NUDCD3--AUP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NUDCD3^ENSG00000015676.18 chr7:44385334:- AUP1^ENSG00000115307.17 chr2:74527757:- NO_LDAS 0.0034 AT 1.7465 AC 1.7232 ["INTERCHROMOSOMAL[chr7--chr2]"] NTN1--AL121929.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NTN1^ENSG00000065320.9 chr17:9179956:+ AL121929.3^ENSG00000287419.1 chr10:103583698:- NO_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr10]"] NTAN1--C19orf71 1 0 1.00 0.00 INCL_NON_REF_SPLICE NTAN1^ENSG00000157045.9 chr16:15047449:- C19orf71^ENSG00000183397.5 chr19:3543287:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr16--chr19]"] NT5M--ARMH1 1 0 1.00 0.00 ONLY_REF_SPLICE NT5M^ENSG00000205309.14 chr17:17323245:+ ARMH1^ENSG00000198520.12 chr1:44692928:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr1]"] NT5DC3--AC024901.1 1 0 1.00 0.00 ONLY_REF_SPLICE NT5DC3^ENSG00000111696.12 chr12:103806322:- AC024901.1^ENSG00000255910.2 chr12:20009721:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr12:83.76Mb]"] NSUN6--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE NSUN6^ENSG00000241058.4 chr10:18651129:- DCTD^ENSG00000129187.15 chr4:182915575:- YES_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr4]"] NSF--SEMA4C 1 0 1.00 0.00 INCL_NON_REF_SPLICE NSF^ENSG00000073969.18 chr17:46749862:+ SEMA4C^ENSG00000168758.11 chr2:96861019:- YES_LDAS 0.0034 GT 1.5329 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr2]"] NSDHL--TICAM2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NSDHL^ENSG00000147383.11 chrX:152867673:+ TICAM2^ENSG00000243414.6 chr5:115579948:- NO_LDAS 0.0034 GT 1.7968 AG 1.6729 ["INTERCHROMOSOMAL[chrX--chr5]"] NRIP1--LINC02246 1 0 1.00 0.00 ONLY_REF_SPLICE NRIP1^ENSG00000180530.11 chr21:15064745:- LINC02246^ENSG00000281903.2 chr21:14857708:- NO_LDAS 0.0034 GT 1.2729 AG 1.5546 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr21:0.04Mb]","NEIGHBORS[42683]"] NRIP1--LINC02246 1 0 1.00 0.00 ONLY_REF_SPLICE NRIP1^ENSG00000180530.11 chr21:15014344:- LINC02246^ENSG00000281903.2 chr21:14857708:- NO_LDAS 0.0034 GT 1.8892 AG 1.5546 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr21:0.04Mb]","NEIGHBORS[42683]"] NR2F1-AS1--SLC4A7 1 0 1.00 0.00 ONLY_REF_SPLICE NR2F1-AS1^ENSG00000237187.9 chr5:93544795:- SLC4A7^ENSG00000033867.16 chr3:27437526:- YES_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTERCHROMOSOMAL[chr5--chr3]"] NR2F1--BUB1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE NR2F1^ENSG00000175745.14 chr5:93593749:+ BUB1B^ENSG00000156970.13 chr15:40185551:+ YES_LDAS 0.0034 GT 1.4566 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr15]"] NR2E1--FAM177A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NR2E1^ENSG00000112333.12 chr6:108166715:+ FAM177A1^ENSG00000151327.13 chr14:35046505:+ NO_LDAS 0.0034 GC 1.5329 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr14]"] NPR2--UXS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPR2^ENSG00000159899.15 chr9:35800845:+ UXS1^ENSG00000115652.15 chr2:106096741:- NO_LDAS 0.0034 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chr9--chr2]"] NPM1P35--EEF1A1P31 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPM1P35^ENSG00000255213.1 chr11:62331240:+ EEF1A1P31^ENSG00000237859.2 chrX:154909640:- NO_LDAS 0.0034 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chrX]"] NPIPA2--SETD4 1 0 0.07 0.00 ONLY_REF_SPLICE NPIPA2^ENSG00000254852.8 chr16:14748185:+ SETD4^ENSG00000185917.14 chr21:36057204:- YES_LDAS 0.0002 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr21]"] NPC2--PGP 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPC2^ENSG00000119655.11 chr14:74493212:- PGP^ENSG00000184207.9 chr16:2214024:- YES_LDAS 0.0034 GT 1.5058 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr16]"] NPAS3--RHOXF1P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE NPAS3^ENSG00000151322.20 chr14:33800866:+ RHOXF1P3^ENSG00000282933.2 chrX:119943286:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chrX]"] NOXA1--GAMT 1 0 1.00 0.00 ONLY_REF_SPLICE NOXA1^ENSG00000188747.8 chr9:137426330:+ GAMT^ENSG00000130005.13 chr19:1397499:- YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr9--chr19]"] NOL11--ABCA9 1 0 1.00 0.00 ONLY_REF_SPLICE NOL11^ENSG00000130935.10 chr17:67743586:+ ABCA9^ENSG00000154258.17 chr17:69051139:- YES_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTRACHROMOSOMAL[chr17:1.23Mb]"] NLRP14--ZNF215 1 0 1.00 0.00 ONLY_REF_SPLICE NLRP14^ENSG00000158077.5 chr11:7049838:+ ZNF215^ENSG00000149054.16 chr11:6955690:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7819 ["INTRACHROMOSOMAL[chr11:0.02Mb]","LOCAL_REARRANGEMENT:+:[19475]"] NKX3-1--SCAND2P 1 0 1.00 0.00 INCL_NON_REF_SPLICE NKX3-1^ENSG00000167034.10 chr8:23679802:- SCAND2P^ENSG00000176700.20 chr15:84646154:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5656 ["INTERCHROMOSOMAL[chr8--chr15]"] NKD2--DPYS 1 0 0.33 0.00 INCL_NON_REF_SPLICE NKD2^ENSG00000145506.14 chr5:1009000:+ DPYS^ENSG00000147647.13 chr8:104466990:- NO_LDAS 0.0011 GC 1.2729 AG 0.8366 ["INTERCHROMOSOMAL[chr5--chr8]"] NHLRC2--LHX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NHLRC2^ENSG00000196865.4 chr10:113855004:+ LHX2^ENSG00000106689.11 chr9:124015276:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr9]"] NHEJ1--CNPPD1 1 0 1.00 0.00 ONLY_REF_SPLICE NHEJ1^ENSG00000187736.13 chr2:219157472:- CNPPD1^ENSG00000115649.16 chr2:219176847:- YES_LDAS 0.0034 GT 1.7819 AG 1.4716 ["ChimerSeq","INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:-:[11032]"] NGDN--THTPA 1 0 1.00 0.00 ONLY_REF_SPLICE NGDN^ENSG00000129460.16 chr14:23477560:+ THTPA^ENSG00000259431.6 chr14:23558695:+ YES_LDAS 0.0034 GT 1.5329 AG 1.8892 ["INTRACHROMOSOMAL[chr14:0.05Mb]","NEIGHBORS[46126]"] NFKB1--TANC1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NFKB1^ENSG00000109320.13 chr4:102537956:+ TANC1^ENSG00000115183.15 chr2:159231741:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr4--chr2]"] NEPRO--C3orf52 1 0 1.00 0.00 ONLY_REF_SPLICE NEPRO^ENSG00000163608.15 chr3:113019542:- C3orf52^ENSG00000114529.13 chr3:112102838:+ YES_LDAS 0.0034 GT 1.4295 AG 1.7465 ["INTRACHROMOSOMAL[chr3:0.87Mb]"] NEK8--ADCK2 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEK8^ENSG00000160602.14 chr17:28737993:+ ADCK2^ENSG00000133597.11 chr7:140673740:+ NO_LDAS 0.0034 GT 1.8256 AG 1.7465 ["INTERCHROMOSOMAL[chr17--chr7]"] NEK2--GTF2F2 1 0 1.00 0.00 ONLY_REF_SPLICE NEK2^ENSG00000117650.13 chr1:211667106:- GTF2F2^ENSG00000188342.12 chr13:45283442:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr13]"] NEK2--ABCA13 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEK2^ENSG00000117650.13 chr1:211673682:- ABCA13^ENSG00000179869.15 chr7:48524412:+ NO_LDAS 0.0034 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr7]"] NEFM--CYP11A1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NEFM^ENSG00000104722.14 chr8:24918579:+ CYP11A1^ENSG00000140459.18 chr15:74361783:- NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr15]"] NEBL--FGFR1OP2 1 0 1.00 0.00 ONLY_REF_SPLICE NEBL^ENSG00000078114.19 chr10:20880794:- FGFR1OP2^ENSG00000111790.14 chr12:26963342:+ NO_LDAS 0.0034 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr12]"] NDUFC2--KCTD14 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFC2^ENSG00000151366.13 chr11:78079579:- KCTD14^ENSG00000151364.17 chr11:78038758:- YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["ConjoinG","INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[22106]"] NDUFC2--KCTD14 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFC2^ENSG00000151366.13 chr11:78072998:- KCTD14^ENSG00000151364.17 chr11:78038758:- NO_LDAS 0.0034 GT 1.9086 AG 1.8295 ["ConjoinG","INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[22106]"] NDUFAF6--NPIPB10P 1 0 0.06 0.00 ONLY_REF_SPLICE NDUFAF6^ENSG00000156170.13 chr8:95044595:+ NPIPB10P^ENSG00000196796.5 chr16:29050502:+ NO_LDAS 0.0002 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr16]"] NDUFAB1--C16orf70 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFAB1^ENSG00000004779.10 chr16:23595429:- C16orf70^ENSG00000125149.12 chr16:67139984:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8062 ["INTRACHROMOSOMAL[chr16:43.51Mb]"] NDUFA6-DT--LINC01160 1 0 0.50 0.00 INCL_NON_REF_SPLICE NDUFA6-DT^ENSG00000237037.9 chr22:42121735:+ LINC01160^ENSG00000231346.5 chr1:111608601:- YES_LDAS 0.0017 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr22--chr1]"] NDUFA6-DT--AL359813.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE NDUFA6-DT^ENSG00000237037.9 chr22:42121735:+ AL359813.1^ENSG00000287055.1 chr6:43424978:+ YES_LDAS 0.0017 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr22--chr6]"] NDUFA5--IQUB 1 0 1.00 0.00 INCL_NON_REF_SPLICE NDUFA5^ENSG00000128609.16 chr7:123542103:- IQUB^ENSG00000164675.11 chr7:123512344:- NO_LDAS 0.0034 GT 1.7465 AG 1.7968 ["INTRACHROMOSOMAL[chr7:0.00Mb]","NEIGHBORS[1920]"] NDUFA4--SLC39A10 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFA4^ENSG00000189043.10 chr7:10940016:- SLC39A10^ENSG00000196950.14 chr2:195680032:+ YES_LDAS 0.0034 GT 1.8062 AG 1.2419 ["INTERCHROMOSOMAL[chr7--chr2]"] NDUFA4--MGC4859 1 0 1.00 0.00 ONLY_REF_SPLICE NDUFA4^ENSG00000189043.10 chr7:10938090:- MGC4859^ENSG00000283117.1 chr7:10561577:- NO_LDAS 0.0034 GT 1.7232 AG 1.7465 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.15Mb]"] NDST2--CAMK2G 1 0 1.00 0.00 ONLY_REF_SPLICE NDST2^ENSG00000166507.19 chr10:73805900:- CAMK2G^ENSG00000148660.21 chr10:73873083:- YES_LDAS 0.0034 GT 1.9329 AG 1.5058 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_REARRANGEMENT:-:[703]"] NCAPG2--AC073636.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCAPG2^ENSG00000146918.20 chr7:158689856:- AC073636.1^ENSG00000227098.2 chr2:176846342:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr2]"] NCAPG2--AC002066.1 1 0 1.00 0.00 ONLY_REF_SPLICE NCAPG2^ENSG00000146918.20 chr7:158671514:- AC002066.1^ENSG00000237813.4 chr7:116243936:- YES_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTRACHROMOSOMAL[chr7:42.13Mb]"] NCAPD3--ALDOA 1 0 1.00 0.00 INCL_NON_REF_SPLICE NCAPD3^ENSG00000151503.13 chr11:134192689:- ALDOA^ENSG00000149925.22 chr16:30065788:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr16]"] NBR2--DHX29 1 0 1.00 0.00 ONLY_REF_SPLICE NBR2^ENSG00000198496.12 chr17:43125770:+ DHX29^ENSG00000067248.10 chr5:55281515:- YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr5]"] NBPF3--AC239859.1 1 0 0.33 0.00 ONLY_REF_SPLICE NBPF3^ENSG00000142794.19 chr1:21479400:+ AC239859.1^ENSG00000203825.4 chr1:143544151:+ NO_LDAS 0.0011 GT 1.8062 AG 1.8892 ["INTRACHROMOSOMAL[chr1:122.06Mb]"] NBN--ZDHHC13 1 0 1.00 0.00 ONLY_REF_SPLICE NBN^ENSG00000104320.14 chr8:89982722:- ZDHHC13^ENSG00000177054.14 chr11:19164301:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5850 ["INTERCHROMOSOMAL[chr8--chr11]"] NBEAP2--C2orf27A 1 0 1.00 0.00 ONLY_REF_SPLICE NBEAP2^ENSG00000197927.13 chr2:131750830:+ C2orf27A^ENSG00000287151.1 chr2:131684709:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS_OVERLAP:+:+:[628]"] NARS2--GAB2 1 0 1.00 0.00 ONLY_REF_SPLICE NARS2^ENSG00000137513.10 chr11:78441091:- GAB2^ENSG00000033327.13 chr11:78280901:- NO_LDAS 0.0034 GT 1.9219 AG 1.8256 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[17620]"] NAPSA--AC008655.2 1 0 1.00 0.00 ONLY_REF_SPLICE NAPSA^ENSG00000131400.8 chr19:50365539:- AC008655.2^ENSG00000269392.1 chr19:50366017:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr19:0.00Mb]","LOCAL_REARRANGEMENT:-:[50]"] NAP1L4--RMND1 1 0 1.00 0.00 ONLY_REF_SPLICE NAP1L4^ENSG00000205531.13 chr11:2976024:- RMND1^ENSG00000155906.19 chr6:151433230:- YES_LDAS 0.0034 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr6]"] NAA40--COX8A 1 0 1.00 0.00 INCL_NON_REF_SPLICE NAA40^ENSG00000110583.13 chr11:63954450:+ COX8A^ENSG00000176340.4 chr11:63976225:+ YES_LDAS 0.0034 GT 1.8295 AG 1.7968 ["INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[17301]"] MYL6P5--DEDD 1 0 1.00 0.00 INCL_NON_REF_SPLICE MYL6P5^ENSG00000228118.3 chr17:71621047:+ DEDD^ENSG00000158796.17 chr1:161130847:- YES_LDAS 0.0034 GT 1.9899 AG 1.7056 ["INTERCHROMOSOMAL[chr17--chr1]"] MYL5--MED23 1 0 0.50 0.00 INCL_NON_REF_SPLICE MYL5^ENSG00000215375.6 chr4:680018:+ MED23^ENSG00000112282.18 chr6:131628173:- NO_LDAS 0.0017 GT 1.6402 AG 1.5301 ["INTERCHROMOSOMAL[chr4--chr6]"] MYH11--AL080243.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE MYH11^ENSG00000133392.18 chr16:15757893:- AL080243.1^ENSG00000237214.3 chr22:41064387:+ YES_LDAS 0.0008 AT 1.7819 AC 1.9656 ["INTERCHROMOSOMAL[chr16--chr22]"] MYB--FAM83B 1 0 1.00 0.00 ONLY_REF_SPLICE MYB^ENSG00000118513.19 chr6:135181536:+ FAM83B^ENSG00000168143.9 chr6:54870187:+ YES_LDAS 0.0034 GT 1.5656 AG 1.5656 ["INTRACHROMOSOMAL[chr6:80.24Mb]"] MUTYH--TESK2 1 0 1.00 0.00 ONLY_REF_SPLICE MUTYH^ENSG00000132781.19 chr1:45340219:- TESK2^ENSG00000070759.17 chr1:45355449:- YES_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[2990]"] MUTYH--SRD5A1 1 0 1.00 0.00 ONLY_REF_SPLICE MUTYH^ENSG00000132781.19 chr1:45334391:- SRD5A1^ENSG00000145545.12 chr5:6656078:+ NO_LDAS 0.0034 GT 1.8062 AG 1.2729 ["INTERCHROMOSOMAL[chr1--chr5]"] MTX2--LNPK 1 0 1.00 0.00 ONLY_REF_SPLICE MTX2^ENSG00000128654.14 chr2:176269669:+ LNPK^ENSG00000144320.14 chr2:175979868:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr2:0.27Mb]"] MTURN--ZNRF2 1 0 1.00 0.00 ONLY_REF_SPLICE MTURN^ENSG00000180354.16 chr7:30135298:+ ZNRF2^ENSG00000180233.11 chr7:30323642:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.12Mb]"] MTPAP--PLAA 1 0 1.00 0.00 ONLY_REF_SPLICE MTPAP^ENSG00000107951.15 chr10:30315963:- PLAA^ENSG00000137055.15 chr9:26935206:- YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr9]"] MTND6P22--KCTD9 1 0 0.33 0.00 INCL_NON_REF_SPLICE MTND6P22^ENSG00000270230.1 chr5:100046781:+ KCTD9^ENSG00000104756.16 chr8:25446250:- NO_LDAS 0.0011 GT 1.5219 AG 1.6895 ["INTERCHROMOSOMAL[chr5--chr8]"] MTMR14--LINC02280 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTMR14^ENSG00000163719.20 chr3:9688711:+ LINC02280^ENSG00000260792.1 chr14:104661909:- NO_LDAS 0.0034 GC 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr3--chr14]"] MTMR10--AAGAB 1 0 1.00 0.00 ONLY_REF_SPLICE MTMR10^ENSG00000166912.17 chr15:30990777:- AAGAB^ENSG00000103591.13 chr15:67236820:- YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr15:36.21Mb]"] MTHFSD--LMF1 1 0 1.00 0.00 ONLY_REF_SPLICE MTHFSD^ENSG00000103248.19 chr16:86546559:- LMF1^ENSG00000103227.19 chr16:931793:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr16:85.55Mb]"] MTHFSD--DPYS 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTHFSD^ENSG00000103248.19 chr16:86552033:- DPYS^ENSG00000147647.13 chr8:104429397:- NO_LDAS 0.0034 GT 1.8062 AG 1.6049 ["INTERCHROMOSOMAL[chr16--chr8]"] MTHFS--AC015871.7 1 0 1.00 0.00 INCL_NON_REF_SPLICE MTHFS^ENSG00000136371.11 chr15:79845249:- AC015871.7^ENSG00000288592.1 chr15:79899125:- YES_LDAS 0.0034 GT 1.6402 AG 1.8256 ["INTRACHROMOSOMAL[chr15:0.00Mb]","LOCAL_REARRANGEMENT:-:[1652]"] MTERF4--GPR89A 1 0 0.50 0.00 ONLY_REF_SPLICE MTERF4^ENSG00000122085.17 chr2:241097243:- GPR89A^ENSG00000117262.19 chr1:145663329:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr1]"] MT-TA--CHRD 1 0 1.00 0.00 INCL_NON_REF_SPLICE MT-TA^ENSG00000210127.1 chrM:5607:- CHRD^ENSG00000090539.15 chr3:184381331:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chrM--chr3]"] MSH3--TENT2 1 0 1.00 0.00 ONLY_REF_SPLICE MSH3^ENSG00000113318.11 chr5:80813741:+ TENT2^ENSG00000164329.13 chr5:79619612:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr5:0.97Mb]"] MRTO4--MUTYH 1 0 1.00 0.00 ONLY_REF_SPLICE MRTO4^ENSG00000053372.5 chr1:19251863:+ MUTYH^ENSG00000132781.19 chr1:45334511:- YES_LDAS 0.0034 GT 1.5058 AG 1.9086 ["INTRACHROMOSOMAL[chr1:26.07Mb]"] MRRF--TMEM135 1 0 1.00 0.00 ONLY_REF_SPLICE MRRF^ENSG00000148187.18 chr9:122285287:+ TMEM135^ENSG00000166575.17 chr11:87318137:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr9--chr11]"] MRPS7--GNG10 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS7^ENSG00000125445.11 chr17:75263507:+ GNG10^ENSG00000242616.4 chr9:111669272:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr9]"] MRPS6--MAPK8 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS6^ENSG00000243927.6 chr21:34073745:+ MAPK8^ENSG00000107643.16 chr10:48424514:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr21--chr10]"] MRPS35--KATNBL1 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS35^ENSG00000061794.13 chr12:27710955:+ KATNBL1^ENSG00000134152.11 chr15:34163690:- YES_LDAS 0.0034 GT 1.8295 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr15]"] MRPS31--UCHL3 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS31^ENSG00000102738.8 chr13:40756873:- UCHL3^ENSG00000118939.18 chr13:75560753:+ YES_LDAS 0.0034 GT 1.6402 AG 1.4295 ["INTRACHROMOSOMAL[chr13:34.78Mb]"] MRPS28--AC036214.1 1 0 1.00 0.00 ONLY_REF_SPLICE MRPS28^ENSG00000147586.10 chr8:80002999:- AC036214.1^ENSG00000249328.3 chr8:79830581:- YES_LDAS 0.0034 GT 1.4295 AG 1.9329 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.05Mb]","NEIGHBORS[46958]"] MRPS22--RPL5P27 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS22^ENSG00000175110.13 chr3:139355790:+ RPL5P27^ENSG00000228195.2 chr10:116751246:+ NO_LDAS 0.0034 GT 1.5329 AG 1.9219 ["INTERCHROMOSOMAL[chr3--chr10]"] MRPS18A--NIM1K 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPS18A^ENSG00000096080.12 chr6:43687668:- NIM1K^ENSG00000177453.7 chr5:43277180:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr5]"] MRPL49--MRPL49P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPL49^ENSG00000149792.9 chr11:65124652:+ MRPL49P1^ENSG00000224296.3 chr5:64675030:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr5]"] MRPL24--HYKK 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPL24^ENSG00000143314.12 chr1:156737458:- HYKK^ENSG00000188266.14 chr15:78527382:+ NO_LDAS 0.0034 GT 1.7819 AG 1.5219 ["INTERCHROMOSOMAL[chr1--chr15]"] MRPL19--TLE4 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRPL19^ENSG00000115364.14 chr2:75652216:+ TLE4^ENSG00000106829.20 chr9:79704805:+ NO_LDAS 0.0034 GT 1.2419 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr9]"] MRPL17--TPRXL 1 0 0.50 0.00 INCL_NON_REF_SPLICE MRPL17^ENSG00000158042.9 chr11:6682195:- TPRXL^ENSG00000180438.15 chr3:14064094:+ NO_LDAS 0.0017 GT 1.9086 AG 1.5656 ["INTERCHROMOSOMAL[chr11--chr3]"] MROH7--TMEM91 1 0 1.00 0.00 ONLY_REF_SPLICE MROH7^ENSG00000184313.20 chr1:54674151:+ TMEM91^ENSG00000142046.15 chr19:41378281:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr19]"] MRM1--HAUS7 1 0 1.00 0.00 INCL_NON_REF_SPLICE MRM1^ENSG00000278619.5 chr17:36602176:+ HAUS7^ENSG00000213397.11 chrX:153462621:- NO_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTERCHROMOSOMAL[chr17--chrX]"] MPV17--PHKG1 1 0 1.00 0.00 ONLY_REF_SPLICE MPV17^ENSG00000115204.15 chr2:27322448:- PHKG1^ENSG00000164776.10 chr7:56088975:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr7]"] MPP6--MFAP3 1 0 1.00 0.00 INCL_NON_REF_SPLICE MPP6^ENSG00000105926.16 chr7:24625736:+ MFAP3^ENSG00000037749.13 chr5:154121718:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr5]"] MPHOSPH9--RGS10 1 0 1.00 0.00 ONLY_REF_SPLICE MPHOSPH9^ENSG00000051825.15 chr12:123210056:- RGS10^ENSG00000148908.15 chr10:119500259:- NO_LDAS 0.0034 GT 1.9086 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr10]"] MORN4--ZBTB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MORN4^ENSG00000171160.18 chr10:97616231:- ZBTB1^ENSG00000126804.13 chr14:64516600:+ YES_LDAS 0.0034 GT 1.8256 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr14]"] MORN1--ODF2L 1 0 1.00 0.00 ONLY_REF_SPLICE MORN1^ENSG00000116151.14 chr1:2372481:- ODF2L^ENSG00000122417.15 chr1:86348878:- YES_LDAS 0.0034 GT 1.8323 AG 1.6402 ["INTRACHROMOSOMAL[chr1:83.96Mb]"] MOB4--AC019080.1 1 0 1.00 0.00 ONLY_REF_SPLICE MOB4^ENSG00000115540.15 chr2:197516146:+ AC019080.1^ENSG00000213963.6 chr2:177311328:- YES_LDAS 0.0034 GT 1.5656 AG 1.7819 ["INTRACHROMOSOMAL[chr2:20.12Mb]"] MNAT1--SMAP1 1 0 1.00 0.00 ONLY_REF_SPLICE MNAT1^ENSG00000020426.11 chr14:60798160:+ SMAP1^ENSG00000112305.15 chr6:70836941:+ YES_LDAS 0.0034 GT 1.5058 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chr6]"] MNAT1--SLC38A6 1 0 1.00 0.00 ONLY_REF_SPLICE MNAT1^ENSG00000020426.11 chr14:60818847:+ SLC38A6^ENSG00000139974.16 chr14:60982508:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr14:0.01Mb]","NEIGHBORS[11149]"] MNAT1--GPHN 1 0 1.00 0.00 ONLY_REF_SPLICE MNAT1^ENSG00000020426.11 chr14:60879835:+ GPHN^ENSG00000171723.16 chr14:67159415:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr14:5.54Mb]"] MNAT1--C22orf34 1 0 1.00 0.00 ONLY_REF_SPLICE MNAT1^ENSG00000020426.11 chr14:60818847:+ C22orf34^ENSG00000188511.12 chr22:49441212:- YES_LDAS 0.0034 GT 1.8295 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chr22]"] MLX--GPR34 1 0 1.00 0.00 INCL_NON_REF_SPLICE MLX^ENSG00000108788.12 chr17:42568506:+ GPR34^ENSG00000171659.15 chrX:41688967:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7056 ["INTERCHROMOSOMAL[chr17--chrX]"] MLLT3--FAM20C 1 0 1.00 0.00 INCL_NON_REF_SPLICE MLLT3^ENSG00000171843.17 chr9:20622297:- FAM20C^ENSG00000177706.9 chr7:255926:+ NO_LDAS 0.0034 GT 0.9056 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr7]"] MIS12--RABEP1 1 0 1.00 0.00 ONLY_REF_SPLICE MIS12^ENSG00000167842.16 chr17:5486684:+ RABEP1^ENSG00000029725.17 chr17:5346790:+ YES_LDAS 0.0034 GT 1.8062 AG 1.7465 ["INTRACHROMOSOMAL[chr17:0.10Mb]","LOCAL_REARRANGEMENT:+:[99945]"] MIR937--NRBP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR937^ENSG00000284224.1 chr8:143813030:- NRBP2^ENSG00000185189.18 chr8:143839056:- NO_LDAS 0.0034 GT 1.7232 AG 1.9899 ["INTRACHROMOSOMAL[chr8:0.02Mb]","LOCAL_REARRANGEMENT:-:[20541]"] MIR4660--CLCN2 1 0 0.33 0.00 INCL_NON_REF_SPLICE MIR4660^ENSG00000263407.1 chr8:9048511:+ CLCN2^ENSG00000114859.16 chr3:184355460:- NO_LDAS 0.0011 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr3]"] MIR4435-2HG--PHF23 1 0 1.00 0.00 ONLY_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111494885:- PHF23^ENSG00000040633.13 chr17:7237660:- YES_LDAS 0.0034 GT 1.7232 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr17]"] MIR4435-2HG--HMGN5 1 0 1.00 0.00 ONLY_REF_SPLICE MIR4435-2HG^ENSG00000172965.17 chr2:111494885:- HMGN5^ENSG00000198157.11 chrX:81118485:- YES_LDAS 0.0034 GT 1.7232 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chrX]"] MIR3605--TPTEP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR3605^ENSG00000284154.1 chr1:33331376:- TPTEP2^ENSG00000244627.5 chr22:38381968:- NO_LDAS 0.0034 GC 1.9656 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr22]"] MIR222HG--METTL14 1 0 1.00 0.00 ONLY_REF_SPLICE MIR222HG^ENSG00000270069.1 chrX:45769786:- METTL14^ENSG00000145388.15 chr4:118694436:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr4]"] MIR222HG--CDK19 1 0 1.00 0.00 ONLY_REF_SPLICE MIR222HG^ENSG00000270069.1 chrX:45769786:- CDK19^ENSG00000155111.15 chr6:110746201:- YES_LDAS 0.0034 GT 1.8892 AG 1.1589 ["INTERCHROMOSOMAL[chrX--chr6]"] MIR2052HG--GDAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR2052HG^ENSG00000254349.6 chr8:74702456:+ GDAP1^ENSG00000104381.14 chr8:74360303:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8062 ["INTRACHROMOSOMAL[chr8:0.08Mb]","LOCAL_REARRANGEMENT:+:[81768]"] MIR181A1HG--PTK2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE MIR181A1HG^ENSG00000229989.4 chr1:198899190:- PTK2B^ENSG00000120899.18 chr8:27444241:+ YES_LDAS 0.0034 AT 1.8256 AC 1.7232 ["INTERCHROMOSOMAL[chr1--chr8]"] MIGA2--ATP5F1C 1 0 1.00 0.00 ONLY_REF_SPLICE MIGA2^ENSG00000148343.18 chr9:129059271:+ ATP5F1C^ENSG00000165629.20 chr10:7797047:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr10]"] MICOS10--MOB4 1 0 1.00 0.00 ONLY_REF_SPLICE MICOS10^ENSG00000173436.15 chr1:19597109:+ MOB4^ENSG00000115540.15 chr2:197535530:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr2]"] MGST1--AC007529.2 1 0 1.00 0.00 ONLY_REF_SPLICE MGST1^ENSG00000008394.13 chr12:16383604:+ AC007529.2^ENSG00000283240.1 chr12:16661766:+ YES_LDAS 0.0034 GT 1.9329 AG 1.6895 ["BodyMap","GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr12:0.05Mb]","NEIGHBORS[52507]"] MFSD14B--FRA10AC1 1 0 1.00 0.00 ONLY_REF_SPLICE MFSD14B^ENSG00000148110.16 chr9:94441099:+ FRA10AC1^ENSG00000148690.12 chr10:93700106:- NO_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr10]"] MFSD14A--MRC1 1 0 1.00 0.00 ONLY_REF_SPLICE MFSD14A^ENSG00000156875.14 chr1:100050004:+ MRC1^ENSG00000260314.3 chr10:17871982:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr10]"] MFSD1--IQCJ 1 0 1.00 0.00 ONLY_REF_SPLICE MFSD1^ENSG00000118855.21 chr3:158827337:+ IQCJ^ENSG00000214216.11 chr3:159245843:+ YES_LDAS 0.0034 GT 1.8062 AG 1.4716 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr3:0.13Mb]"] MFGE8--CEPT1 1 0 1.00 0.00 ONLY_REF_SPLICE MFGE8^ENSG00000140545.15 chr15:88905757:- CEPT1^ENSG00000134255.14 chr1:111147642:+ YES_LDAS 0.0034 GT 1.9219 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr1]"] MFAP3--IL1RAPL2 1 0 1.00 0.00 INCL_NON_REF_SPLICE MFAP3^ENSG00000037749.13 chr5:154053312:+ IL1RAPL2^ENSG00000189108.13 chrX:105717453:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chrX]"] METTL27--LINC01348 1 0 0.50 0.00 INCL_NON_REF_SPLICE METTL27^ENSG00000165171.11 chr7:73840031:- LINC01348^ENSG00000280587.1 chr1:235065586:- YES_LDAS 0.0017 GT 1.9086 AG 1.9219 ["INTERCHROMOSOMAL[chr7--chr1]"] METTL27--ISG20 1 0 1.00 0.00 INCL_NON_REF_SPLICE METTL27^ENSG00000165171.11 chr7:73840031:- ISG20^ENSG00000172183.16 chr15:88646956:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr15]"] METTL27--ANGPT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE METTL27^ENSG00000165171.11 chr7:73842018:- ANGPT2^ENSG00000091879.14 chr8:6508337:- NO_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr8]"] MESD--TBX5-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MESD^ENSG00000117899.11 chr15:80948780:- TBX5-AS1^ENSG00000255399.4 chr12:114412446:+ NO_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr12]"] MERTK--EEF1E1P1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MERTK^ENSG00000153208.17 chr2:111929540:+ EEF1E1P1^ENSG00000236307.2 chr2:111887898:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.01Mb]","LOCAL_REARRANGEMENT:+:[9866]"] MEMO1--SPAST 1 0 1.00 0.00 ONLY_REF_SPLICE MEMO1^ENSG00000162959.14 chr2:32010187:- SPAST^ENSG00000021574.13 chr2:32114638:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTRACHROMOSOMAL[chr2:0.05Mb]","LOCAL_INVERSION:-:+:[52326]"] MEIOSIN--AP004550.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MEIOSIN^ENSG00000237452.3 chr19:45762129:+ AP004550.1^ENSG00000254573.1 chr11:134572906:+ NO_LDAS 0.0034 GT 1.6402 AG 1.5546 ["INTERCHROMOSOMAL[chr19--chr11]"] MEF2C--FBXW11 1 0 1.00 0.00 ONLY_REF_SPLICE MEF2C^ENSG00000081189.16 chr5:88804598:- FBXW11^ENSG00000072803.18 chr5:171910797:- YES_LDAS 0.0034 GT 1.9656 AG 1.6729 ["INTRACHROMOSOMAL[chr5:82.96Mb]"] MED31--SUPT3H 1 0 1.00 0.00 ONLY_REF_SPLICE MED31^ENSG00000108590.11 chr17:6650356:- SUPT3H^ENSG00000196284.17 chr6:45322967:- YES_LDAS 0.0034 GT 1.5219 AG 1.7819 ["INTERCHROMOSOMAL[chr17--chr6]"] MED27--RALGPS1 1 0 1.00 0.00 ONLY_REF_SPLICE MED27^ENSG00000160563.14 chr9:132077442:- RALGPS1^ENSG00000136828.19 chr9:127034431:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9899 ["INTRACHROMOSOMAL[chr9:4.63Mb]"] MED27--DNAJC25 1 0 1.00 0.00 ONLY_REF_SPLICE MED27^ENSG00000160563.14 chr9:131939381:- DNAJC25^ENSG00000059769.20 chr9:111642857:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr9:20.20Mb]"] MED14--OFD1 1 0 0.50 0.00 ONLY_REF_SPLICE MED14^ENSG00000180182.11 chrX:40726746:- OFD1^ENSG00000046651.15 chrX:13749427:+ YES_LDAS 0.0017 GT 1.7819 AG 1.4256 ["INTRACHROMOSOMAL[chrX:26.88Mb]"] MED12L--SEC62 1 0 1.00 0.00 ONLY_REF_SPLICE MED12L^ENSG00000144893.12 chr3:151190931:+ SEC62^ENSG00000008952.17 chr3:169975608:+ NO_LDAS 0.0034 GT 1.5219 AG 1.9086 ["INTRACHROMOSOMAL[chr3:18.53Mb]"] MED10--EPB41L4A-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MED10^ENSG00000133398.4 chr5:6372413:- EPB41L4A-AS1^ENSG00000224032.7 chr5:112161249:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTRACHROMOSOMAL[chr5:105.78Mb]"] MECR--C8orf44 1 0 1.00 0.00 ONLY_REF_SPLICE MECR^ENSG00000116353.16 chr1:29216005:- C8orf44^ENSG00000288596.2 chr8:66679721:+ YES_LDAS 0.0034 GT 1.9329 AG 1.3996 ["INTERCHROMOSOMAL[chr1--chr8]"] MEAF6--WFIKKN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MEAF6^ENSG00000163875.16 chr1:37494088:- WFIKKN1^ENSG00000127578.7 chr16:633116:+ NO_LDAS 0.0034 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr16]"] ME1--SNAP91 1 0 1.00 0.00 ONLY_REF_SPLICE ME1^ENSG00000065833.9 chr6:83346173:- SNAP91^ENSG00000065609.14 chr6:83560947:- YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr6:0.12Mb]"] ME1--IL17RC 1 0 1.00 0.00 INCL_NON_REF_SPLICE ME1^ENSG00000065833.9 chr6:83239539:- IL17RC^ENSG00000163702.20 chr3:9920518:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr3]"] MDFIC--WLS 1 0 1.00 0.00 ONLY_REF_SPLICE MDFIC^ENSG00000135272.12 chr7:114923127:+ WLS^ENSG00000116729.14 chr1:68159247:- YES_LDAS 0.0034 GT 1.7465 AG 1.5329 ["INTERCHROMOSOMAL[chr7--chr1]"] MCUB--C5orf64 1 0 1.00 0.00 INCL_NON_REF_SPLICE MCUB^ENSG00000005059.16 chr4:109560436:+ C5orf64^ENSG00000178722.13 chr5:61757477:+ NO_LDAS 0.0034 GT 1.3753 AG 1.5329 ["INTERCHROMOSOMAL[chr4--chr5]"] MCU--SIL1 1 0 1.00 0.00 ONLY_REF_SPLICE MCU^ENSG00000156026.14 chr10:72692301:+ SIL1^ENSG00000120725.13 chr5:139051046:- YES_LDAS 0.0034 GT 1.5301 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr5]"] MCPH1--RPS10P7 1 0 1.00 0.00 ONLY_REF_SPLICE MCPH1^ENSG00000147316.13 chr8:6414883:+ RPS10P7^ENSG00000223396.4 chr1:201530094:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr8--chr1]"] MCMDC2--SGK3 1 0 1.00 0.00 ONLY_REF_SPLICE MCMDC2^ENSG00000178460.18 chr8:66874586:+ SGK3^ENSG00000104205.16 chr8:66841024:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.01Mb]","LOCAL_REARRANGEMENT:+:[8727]"] MCM9--CEP85L 1 0 1.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118826782:- CEP85L^ENSG00000111860.14 chr6:118632611:- YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr6:0.10Mb]"] MCM9--CEP85L 1 0 1.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118826147:- CEP85L^ENSG00000111860.14 chr6:118664521:- YES_LDAS 0.0034 GT 1.7465 AG 1.6895 ["INTRACHROMOSOMAL[chr6:0.10Mb]"] MCM9--CEP85L 1 0 1.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118826147:- CEP85L^ENSG00000111860.14 chr6:118652808:- YES_LDAS 0.0034 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.10Mb]"] MCM9--CEP85L 1 0 1.00 0.00 ONLY_REF_SPLICE MCM9^ENSG00000111877.18 chr6:118826147:- CEP85L^ENSG00000111860.14 chr6:118632611:- NO_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr6:0.10Mb]"] MCF2L2--PARP9 1 0 1.00 0.00 INCL_NON_REF_SPLICE MCF2L2^ENSG00000053524.12 chr3:183298504:- PARP9^ENSG00000138496.16 chr3:122552612:- NO_LDAS 0.0034 AT 1.5628 AC 1.8062 ["INTRACHROMOSOMAL[chr3:60.61Mb]"] MBTPS2--GK5 1 0 1.00 0.00 ONLY_REF_SPLICE MBTPS2^ENSG00000012174.12 chrX:21853503:+ GK5^ENSG00000175066.16 chr3:142213601:- NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr3]"] MARK1--AL390957.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MARK1^ENSG00000116141.17 chr1:220528873:+ AL390957.1^ENSG00000285280.2 chr1:192957422:- YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr1:27.57Mb]"] MARCHF9--LINC00562 1 0 1.00 0.00 INCL_NON_REF_SPLICE MARCHF9^ENSG00000139266.6 chr12:57757084:+ LINC00562^ENSG00000260388.2 chr13:47930590:- NO_LDAS 0.0034 GT 1.7819 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr13]"] MARCHF3--C5orf63 1 0 1.00 0.00 ONLY_REF_SPLICE MARCHF3^ENSG00000173926.6 chr5:126914930:- C5orf63^ENSG00000164241.13 chr5:127047915:- YES_LDAS 0.0034 GT 1.8295 AG 1.8323 ["INTRACHROMOSOMAL[chr5:0.01Mb]","LOCAL_REARRANGEMENT:-:[12000]"] MAPK8--PARG 1 0 0.50 0.00 ONLY_REF_SPLICE MAPK8^ENSG00000107643.16 chr10:48306821:+ PARG^ENSG00000227345.9 chr10:49922419:- YES_LDAS 0.0017 GT 1.5219 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr10:1.38Mb]"] MAP4K5--RSPH4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP4K5^ENSG00000012983.11 chr14:50440013:- RSPH4A^ENSG00000111834.13 chr6:116617060:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr6]"] MAP4K5--PSMG4 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP4K5^ENSG00000012983.11 chr14:50440013:- PSMG4^ENSG00000180822.12 chr6:3291447:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr6]"] MAP3K7--RNGTT 1 0 1.00 0.00 ONLY_REF_SPLICE MAP3K7^ENSG00000135341.18 chr6:90586764:- RNGTT^ENSG00000111880.16 chr6:88853764:- YES_LDAS 0.0034 GT 1.6895 AG 1.8062 ["INTRACHROMOSOMAL[chr6:1.55Mb]"] MAP3K7--OSBPL11 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP3K7^ENSG00000135341.18 chr6:90561622:- OSBPL11^ENSG00000144909.8 chr3:125530121:- NO_LDAS 0.0034 GT 1.7968 AG 1.1033 ["INTERCHROMOSOMAL[chr6--chr3]"] MAP3K12--FAM155A 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP3K12^ENSG00000139625.13 chr12:53483937:- FAM155A^ENSG00000204442.4 chr13:107867136:- NO_LDAS 0.0034 GT 1.8323 AG 0.8366 ["INTERCHROMOSOMAL[chr12--chr13]"] MAP2K5--SKOR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE MAP2K5^ENSG00000137764.20 chr15:67806981:+ SKOR1^ENSG00000188779.12 chr15:67825936:+ YES_LDAS 0.0034 GT 1.7819 AG 1.6729 ["ChimerSeq","INTRACHROMOSOMAL[chr15:0.01Mb]","NEIGHBORS[12587]"] MANBAL--TXLNG 1 0 1.00 0.00 ONLY_REF_SPLICE MANBAL^ENSG00000101363.12 chr20:37301413:+ TXLNG^ENSG00000086712.13 chrX:16818574:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9086 ["INTERCHROMOSOMAL[chr20--chrX]"] MAMSTR--MKKS 1 0 1.00 0.00 ONLY_REF_SPLICE MAMSTR^ENSG00000176909.12 chr19:48713860:- MKKS^ENSG00000125863.20 chr20:10428816:- NO_LDAS 0.0034 GT 1.7465 AG 1.8295 ["INTERCHROMOSOMAL[chr19--chr20]"] MAD2L1BP--PTPRA 1 0 1.00 0.00 ONLY_REF_SPLICE MAD2L1BP^ENSG00000124688.14 chr6:43633315:+ PTPRA^ENSG00000132670.20 chr20:2964272:+ YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr20]"] MACROH2A2--SAR1A 1 0 1.00 0.00 ONLY_REF_SPLICE MACROH2A2^ENSG00000099284.15 chr10:70075830:+ SAR1A^ENSG00000079332.15 chr10:70161069:- YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr10:0.04Mb]","LOCAL_INVERSION:+:-:[35007]"] MACROD2--AC066613.1 1 0 1.00 0.00 ONLY_REF_SPLICE MACROD2^ENSG00000172264.17 chr20:14002404:+ AC066613.1^ENSG00000259668.6 chr15:51458720:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr20--chr15]"] LZIC--SLIT3-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LZIC^ENSG00000162441.12 chr1:9932858:- SLIT3-AS1^ENSG00000248222.5 chr5:169026433:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr1--chr5]"] LYRM7--CDC42SE2 1 0 1.00 0.00 ONLY_REF_SPLICE LYRM7^ENSG00000186687.16 chr5:131171038:+ CDC42SE2^ENSG00000158985.14 chr5:131315976:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9329 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[40065]"] LYRM2--CYB5R4 1 0 1.00 0.00 INCL_NON_REF_SPLICE LYRM2^ENSG00000083099.11 chr6:89637674:- CYB5R4^ENSG00000065615.14 chr6:83963596:+ NO_LDAS 0.0034 GT 0.8366 AG 1.9329 ["INTRACHROMOSOMAL[chr6:5.60Mb]"] LYPLA2--H3-2 1 0 0.20 0.00 INCL_NON_REF_SPLICE LYPLA2^ENSG00000011009.11 chr1:23794530:+ H3-2^ENSG00000273213.3 chr1:143905936:- YES_LDAS 0.0007 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr1:120.10Mb]"] LYPLA1--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLA1^ENSG00000120992.18 chr8:54100908:- STAU2^ENSG00000040341.18 chr8:73422702:- YES_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr8:19.32Mb]"] LYPLA1--RGS20 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLA1^ENSG00000120992.18 chr8:54062254:- RGS20^ENSG00000147509.14 chr8:53913497:+ NO_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTRACHROMOSOMAL[chr8:0.09Mb]","LOCAL_INVERSION:-:+:[87064]"] LYPLA1--CHMP4C 1 0 1.00 0.00 ONLY_REF_SPLICE LYPLA1^ENSG00000120992.18 chr8:54100908:- CHMP4C^ENSG00000164695.5 chr8:81758142:+ YES_LDAS 0.0034 GT 1.8062 AG 1.8062 ["INTRACHROMOSOMAL[chr8:27.63Mb]"] LYAR--AK9 1 0 0.20 0.00 INCL_NON_REF_SPLICE LYAR^ENSG00000145220.14 chr4:4274421:- AK9^ENSG00000155085.15 chr6:109659256:- YES_LDAS 0.0007 GT 1.5850 AG 1.2729 ["INTERCHROMOSOMAL[chr4--chr6]"] LUCAT1--SNRK 1 0 1.00 0.00 ONLY_REF_SPLICE LUCAT1^ENSG00000248323.7 chr5:91207633:- SNRK^ENSG00000163788.14 chr3:43332169:+ YES_LDAS 0.0034 GT 1.2729 AG 1.7819 ["INTERCHROMOSOMAL[chr5--chr3]"] LSM7--KPTN 1 0 1.00 0.00 ONLY_REF_SPLICE LSM7^ENSG00000130332.15 chr19:2328387:- KPTN^ENSG00000118162.14 chr19:47475544:- YES_LDAS 0.0034 GT 1.4566 AG 1.9656 ["INTRACHROMOSOMAL[chr19:45.15Mb]"] LSM5--HDGFL3 1 0 1.00 0.00 INCL_NON_REF_SPLICE LSM5^ENSG00000106355.10 chr7:32488628:- HDGFL3^ENSG00000166503.9 chr15:83132831:- NO_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTERCHROMOSOMAL[chr7--chr15]"] LRRC75B--SAR1A 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC75B^ENSG00000178026.13 chr22:24588214:- SAR1A^ENSG00000079332.15 chr10:70152592:- YES_LDAS 0.0034 GT 1.8256 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr10]"] LRRC75B--FPR2 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC75B^ENSG00000178026.13 chr22:24588214:- FPR2^ENSG00000171049.9 chr19:51762417:+ NO_LDAS 0.0034 GT 1.8256 AG 1.5546 ["INTERCHROMOSOMAL[chr22--chr19]"] LRRC45--TGM6 1 0 1.00 0.00 INCL_NON_REF_SPLICE LRRC45^ENSG00000169683.8 chr17:82024763:+ TGM6^ENSG00000166948.10 chr20:2394561:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr20]"] LRRC37B--AC006441.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE LRRC37B^ENSG00000185158.12 chr17:32018004:+ AC006441.5^ENSG00000277426.1 chr17:39026691:+ NO_LDAS 0.0034 GT 1.9329 AG 1.5656 ["INTRACHROMOSOMAL[chr17:6.97Mb]"] LRRC37A9P--RDM1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LRRC37A9P^ENSG00000271013.1 chr17:35917512:- RDM1^ENSG00000278023.7 chr17:35930255:- YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTRACHROMOSOMAL[chr17:0.00Mb]","LOCAL_REARRANGEMENT:-:[56]"] LRRC37A--PI4KB 1 0 0.33 0.00 INCL_NON_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46331716:+ PI4KB^ENSG00000143393.16 chr1:151298872:- NO_LDAS 0.0011 GC 1.8323 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr1]"] LRRC37A--NSF 1 0 0.10 0.00 ONLY_REF_SPLICE LRRC37A^ENSG00000176681.14 chr17:46302709:+ NSF^ENSG00000073969.18 chr17:46692903:+ YES_LDAS 0.0003 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr17:0.25Mb]"] LRRC23--INTU 1 0 0.50 0.00 INCL_NON_REF_SPLICE LRRC23^ENSG00000010626.15 chr12:6907445:+ INTU^ENSG00000164066.13 chr4:127632959:+ NO_LDAS 0.0017 GT 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr4]"] LRRC10B--ZCCHC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE LRRC10B^ENSG00000204950.4 chr11:61508816:+ ZCCHC3^ENSG00000247315.4 chr20:298046:+ NO_LDAS 0.0034 GT 0.9710 AG 1.2729 ["INTERCHROMOSOMAL[chr11--chr20]"] LRRC1--FAM83B 1 0 1.00 0.00 ONLY_REF_SPLICE LRRC1^ENSG00000137269.15 chr6:53795415:+ FAM83B^ENSG00000168143.9 chr6:54870187:+ YES_LDAS 0.0034 GT 1.7056 AG 1.5656 ["INTRACHROMOSOMAL[chr6:0.92Mb]"] LRR1--BRCA1 1 0 1.00 0.00 ONLY_REF_SPLICE LRR1^ENSG00000165501.17 chr14:49602468:+ BRCA1^ENSG00000012048.23 chr17:43045802:- YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr17]"] LRMDA--TMEM254 1 0 1.00 0.00 ONLY_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:75438494:+ TMEM254^ENSG00000133678.14 chr10:80081841:+ YES_LDAS 0.0034 GT 1.8892 AG 1.4295 ["INTRACHROMOSOMAL[chr10:3.52Mb]"] LRMDA--PSMG3 1 0 1.00 0.00 ONLY_REF_SPLICE LRMDA^ENSG00000148655.15 chr10:76058783:+ PSMG3^ENSG00000157778.9 chr7:1569360:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr7]"] LRCH1--SPRY2 1 0 1.00 0.00 ONLY_REF_SPLICE LRCH1^ENSG00000136141.15 chr13:46553703:+ SPRY2^ENSG00000136158.12 chr13:80337756:- YES_LDAS 0.0034 GT 1.8062 AG 1.7819 ["INTRACHROMOSOMAL[chr13:33.58Mb]"] LRAT--RBM46 1 0 1.00 0.00 ONLY_REF_SPLICE LRAT^ENSG00000121207.12 chr4:154744866:+ RBM46^ENSG00000151962.8 chr4:154796742:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr4:0.03Mb]","NEIGHBORS[28093]"] LMO7--UCHL3 1 0 1.00 0.00 ONLY_REF_SPLICE LMO7^ENSG00000136153.20 chr13:75623320:+ UCHL3^ENSG00000118939.18 chr13:75594915:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9219 ["Klijn_CellLines","TumorFusionsNAR2018","INTRACHROMOSOMAL[chr13:0.01Mb]","LOCAL_REARRANGEMENT:+:[14414]"] LMBRD1--PAK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LMBRD1^ENSG00000168216.13 chr6:69737942:- PAK1^ENSG00000149269.10 chr11:77474669:- YES_LDAS 0.0034 GT 1.8062 AG 1.2366 ["INTERCHROMOSOMAL[chr6--chr11]"] LLPH--SNRPA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LLPH^ENSG00000139233.7 chr12:66130705:- SNRPA1^ENSG00000131876.17 chr15:101285790:- YES_LDAS 0.0034 GT 1.7465 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr15]"] LIPH--LNP1 1 0 1.00 0.00 ONLY_REF_SPLICE LIPH^ENSG00000163898.10 chr3:185552423:- LNP1^ENSG00000206535.8 chr3:100429697:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTRACHROMOSOMAL[chr3:85.05Mb]"] LINS1--ST8SIA1 1 0 0.50 0.00 ONLY_REF_SPLICE LINS1^ENSG00000140471.17 chr15:100580263:- ST8SIA1^ENSG00000111728.11 chr12:22150234:- NO_LDAS 0.0017 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr12]"] LINS1--AL589740.1 1 0 0.50 0.00 ONLY_REF_SPLICE LINS1^ENSG00000140471.17 chr15:100580263:- AL589740.1^ENSG00000271860.7 chr6:97612168:+ NO_LDAS 0.0017 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr6]"] LINC02882--CD83 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02882^ENSG00000251138.7 chr12:74157790:- CD83^ENSG00000112149.10 chr6:14117950:+ YES_LDAS 0.0034 GT 1.7232 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr6]"] LINC02680--CCDC7 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02680^ENSG00000285737.1 chr10:27578713:+ CCDC7^ENSG00000216937.13 chr10:32565558:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr10:4.85Mb]"] LINC02643--NEBL 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC02643^ENSG00000230109.1 chr10:21340142:- NEBL^ENSG00000078114.19 chr10:21020201:- YES_LDAS 0.0034 GT 1.7968 AG 1.7056 ["INTRACHROMOSOMAL[chr10:0.05Mb]","NEIGHBORS[47222]"] LINC02609--ZNF644 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02609^ENSG00000233593.10 chr1:90831930:- ZNF644^ENSG00000122482.21 chr1:90918154:- YES_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.06Mb]","LOCAL_REARRANGEMENT:-:[63640]"] LINC02340--USP12 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02340^ENSG00000275294.4 chr13:27186506:- USP12^ENSG00000152484.14 chr13:27116596:- YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr13:0.01Mb]","NEIGHBORS[6452]"] LINC02210--CRHR1 1 0 0.50 0.00 ONLY_REF_SPLICE LINC02210^ENSG00000204650.14 chr17:45622041:+ CRHR1^ENSG00000120088.15 chr17:45807010:+ NO_LDAS 0.0017 GT 1.9656 AG 1.4295 ["INTRACHROMOSOMAL[chr17:0.13Mb]"] LINC02043--GRAMD1C 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02043^ENSG00000232233.1 chr3:186823545:- GRAMD1C^ENSG00000178075.20 chr3:113901031:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr3:72.86Mb]"] LINC02008--FBXL20 1 0 1.00 0.00 ONLY_REF_SPLICE LINC02008^ENSG00000239440.6 chr3:82185453:+ FBXL20^ENSG00000108306.13 chr17:39343241:- YES_LDAS 0.0034 GT 1.6729 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr17]"] LINC01968--COX10 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01968^ENSG00000237222.4 chr3:194768472:+ COX10^ENSG00000006695.12 chr17:14191989:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr17]"] LINC01876--GPD2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01876^ENSG00000226383.7 chr2:156254778:- GPD2^ENSG00000115159.16 chr2:156476098:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.18Mb]"] LINC01778--ATL3 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01778^ENSG00000223382.5 chr1:30826652:+ ATL3^ENSG00000184743.13 chr11:63636334:- NO_LDAS 0.0034 GT 1.9329 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr11]"] LINC01721--RAB28 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01721^ENSG00000230133.2 chr20:24219702:+ RAB28^ENSG00000157869.16 chr4:13479526:- YES_LDAS 0.0034 GT 1.5329 AG 1.8062 ["INTERCHROMOSOMAL[chr20--chr4]"] LINC01711--TMEM231 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01711^ENSG00000268941.2 chr20:58635441:+ TMEM231^ENSG00000205084.11 chr16:75555951:- YES_LDAS 0.0034 GC 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr20--chr16]"] LINC01696--TMEM106C 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC01696^ENSG00000227940.2 chr1:209327275:+ TMEM106C^ENSG00000134291.12 chr12:47967208:+ NO_LDAS 0.0034 GT 1.5546 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr12]"] LINC01666--PSMD14 1 0 0.33 0.00 INCL_NON_REF_SPLICE LINC01666^ENSG00000279579.3 chr21:8761334:+ PSMD14^ENSG00000115233.12 chr2:161367478:+ YES_LDAS 0.0011 GT 1.7968 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr2]"] LINC01572--C16orf46 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01572^ENSG00000261008.7 chr16:72664892:- C16orf46^ENSG00000166455.14 chr16:81062138:- YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr16:8.39Mb]"] LINC01515--OCIAD2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01515^ENSG00000228065.11 chr10:65615761:+ OCIAD2^ENSG00000145247.12 chr4:48892889:- YES_LDAS 0.0034 GT 1.9086 AG 1.5058 ["INTERCHROMOSOMAL[chr10--chr4]"] LINC01505--AL138778.1 1 0 0.50 0.00 ONLY_REF_SPLICE LINC01505^ENSG00000234323.8 chr9:106500505:+ AL138778.1^ENSG00000286285.1 chr1:193457641:+ YES_LDAS 0.0017 GT 1.5329 AG 1.6402 ["INTERCHROMOSOMAL[chr9--chr1]"] LINC01492--UBE2E2 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01492^ENSG00000225564.6 chr9:103188046:- UBE2E2^ENSG00000182247.10 chr3:23499608:+ NO_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr3]"] LINC01473--SCOC 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01473^ENSG00000237877.7 chr2:186178599:- SCOC^ENSG00000153130.18 chr4:140379121:+ YES_LDAS 0.0034 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr2--chr4]"] LINC01470--INVS 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01470^ENSG00000249484.9 chr5:152623231:- INVS^ENSG00000119509.13 chr9:100104498:+ YES_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr5--chr9]"] LINC01376--LDAH 1 0 1.00 0.00 ONLY_REF_SPLICE LINC01376^ENSG00000236204.6 chr2:19125252:- LDAH^ENSG00000118961.15 chr2:20790398:- YES_LDAS 0.0034 GT 1.9656 AG 1.9219 ["INTRACHROMOSOMAL[chr2:1.34Mb]"] LINC01145--SRGAP2B 1 0 0.33 0.00 ONLY_REF_SPLICE LINC01145^ENSG00000272419.6 chr1:145214677:- SRGAP2B^ENSG00000196369.11 chr1:144995200:- YES_LDAS 0.0011 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.07Mb]","NEIGHBORS[68571]"] LINC01106--ZNF800 1 0 0.50 0.00 INCL_NON_REF_SPLICE LINC01106^ENSG00000175772.11 chr2:110384315:- ZNF800^ENSG00000048405.10 chr7:127373479:- YES_LDAS 0.0017 GC 1.9086 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr7]"] LINC01031--AL138778.1 1 0 0.50 0.00 ONLY_REF_SPLICE LINC01031^ENSG00000232077.2 chr1:193304938:+ AL138778.1^ENSG00000286285.1 chr1:193457641:+ YES_LDAS 0.0017 GT 1.5329 AG 1.6402 ["INTRACHROMOSOMAL[chr1:0.09Mb]","NEIGHBORS[91469]"] LINC00987--PALB2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00987^ENSG00000237248.5 chr12:9240293:+ PALB2^ENSG00000083093.10 chr16:23635267:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr12--chr16]"] LINC00896--POFUT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00896^ENSG00000236499.2 chr22:20206464:+ POFUT2^ENSG00000186866.17 chr21:45277142:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr21]"] LINC00894--HSFX3 1 0 0.50 0.00 ONLY_REF_SPLICE LINC00894^ENSG00000235703.6 chrX:149960948:+ HSFX3^ENSG00000283697.3 chrX:149548910:- YES_LDAS 0.0017 GT 1.8892 AG 1.8062 ["INTRACHROMOSOMAL[chrX:0.39Mb]"] LINC00882--MED14 1 0 1.00 0.00 ONLY_REF_SPLICE LINC00882^ENSG00000242759.8 chr3:107114753:- MED14^ENSG00000180182.11 chrX:40729345:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr3--chrX]"] LINC00707--GNA14 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00707^ENSG00000238266.2 chr10:6789681:+ GNA14^ENSG00000156049.7 chr9:77431531:- NO_LDAS 0.0034 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr9]"] LINC00552--TMEM43 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC00552^ENSG00000279770.1 chr13:113750025:- TMEM43^ENSG00000170876.8 chr3:14129412:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr13--chr3]"] LINC00115--AC240565.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE LINC00115^ENSG00000225880.5 chr1:827484:- AC240565.1^ENSG00000280136.2 chr17:106864:- YES_LDAS 0.0008 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr17]"] LINC-PINT--TSPAN9 1 0 1.00 0.00 INCL_NON_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130941413:- TSPAN9^ENSG00000011105.14 chr12:3201177:+ NO_LDAS 0.0034 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr12]"] LINC-PINT--SUPT3H 1 0 1.00 0.00 ONLY_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130945720:- SUPT3H^ENSG00000196284.17 chr6:45365301:- NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr6]"] LINC-PINT--CHM 1 0 1.00 0.00 ONLY_REF_SPLICE LINC-PINT^ENSG00000231721.7 chr7:130945720:- CHM^ENSG00000188419.14 chrX:85964052:- YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr7--chrX]"] LIN7C--NIPA2 1 0 1.00 0.00 ONLY_REF_SPLICE LIN7C^ENSG00000148943.12 chr11:27506716:- NIPA2^ENSG00000140157.16 chr15:22858540:+ NO_LDAS 0.0034 GT 1.7232 AG 1.5546 ["INTERCHROMOSOMAL[chr11--chr15]"] LIN52--TMEM135 1 0 1.00 0.00 ONLY_REF_SPLICE LIN52^ENSG00000205659.11 chr14:74101238:+ TMEM135^ENSG00000166575.17 chr11:87157341:+ YES_LDAS 0.0034 GT 1.6402 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr11]"] LIN52--NRIP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LIN52^ENSG00000205659.11 chr14:74198973:+ NRIP1^ENSG00000180530.11 chr21:15065893:- NO_LDAS 0.0034 GT 1.4566 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr21]"] LIAS--LINC00674 1 0 1.00 0.00 ONLY_REF_SPLICE LIAS^ENSG00000121897.15 chr4:39466117:+ LINC00674^ENSG00000237854.3 chr17:68114422:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr17]"] LIAS--KIF27 1 0 1.00 0.00 ONLY_REF_SPLICE LIAS^ENSG00000121897.15 chr4:39466117:+ KIF27^ENSG00000165115.15 chr9:83915678:- NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr9]"] LFNG--ZNF821 1 0 0.33 0.00 INCL_NON_REF_SPLICE LFNG^ENSG00000106003.13 chr7:2527337:+ ZNF821^ENSG00000102984.15 chr16:71864940:- NO_LDAS 0.0011 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr7--chr16]"] LCMT1--FTLP10 1 0 1.00 0.00 INCL_NON_REF_SPLICE LCMT1^ENSG00000205629.12 chr16:25111996:+ FTLP10^ENSG00000250426.2 chr4:68212406:+ NO_LDAS 0.0034 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr16--chr4]"] LCA5--KIAA0753 1 0 1.00 0.00 INCL_NON_REF_SPLICE LCA5^ENSG00000135338.14 chr6:79518705:- KIAA0753^ENSG00000198920.11 chr17:6620869:- NO_LDAS 0.0034 GT 1.7968 AG 1.6729 ["INTERCHROMOSOMAL[chr6--chr17]"] LAT2--ARHGAP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LAT2^ENSG00000086730.17 chr7:74220619:+ ARHGAP1^ENSG00000175220.12 chr11:46688202:- YES_LDAS 0.0034 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr11]"] LARGE-AS1--TMTC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE LARGE-AS1^ENSG00000224973.6 chr22:33725101:+ TMTC2^ENSG00000179104.9 chr12:82687507:+ NO_LDAS 0.0034 GT 1.6402 AG 1.7819 ["INTERCHROMOSOMAL[chr22--chr12]"] LAP3--SLC4A8 1 0 1.00 0.00 ONLY_REF_SPLICE LAP3^ENSG00000002549.13 chr4:17588977:+ SLC4A8^ENSG00000050438.17 chr12:51485787:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr12]"] LAMTOR1--FBLN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE LAMTOR1^ENSG00000149357.10 chr11:72097843:- FBLN1^ENSG00000077942.19 chr22:45527876:+ YES_LDAS 0.0034 GT 1.7819 AG 1.4295 ["INTERCHROMOSOMAL[chr11--chr22]"] LACTB--ZFAND6 1 0 1.00 0.00 ONLY_REF_SPLICE LACTB^ENSG00000103642.12 chr15:63127689:+ ZFAND6^ENSG00000086666.19 chr15:80120328:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr15:16.92Mb]"] KRTAP5-AS1--AP000867.5 1 0 1.00 0.00 INCL_NON_REF_SPLICE KRTAP5-AS1^ENSG00000233930.4 chr11:1598277:+ AP000867.5^ENSG00000286948.1 chr11:71563684:- YES_LDAS 0.0034 GT 1.6729 AG 1.8295 ["INTRACHROMOSOMAL[chr11:69.96Mb]"] KRTAP12-1--NSMAF 1 0 1.00 0.00 INCL_NON_REF_SPLICE KRTAP12-1^ENSG00000187175.5 chr21:44682032:- NSMAF^ENSG00000035681.9 chr8:58599363:- NO_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTERCHROMOSOMAL[chr21--chr8]"] KRT42P--OGDHL 1 0 1.00 0.00 ONLY_REF_SPLICE KRT42P^ENSG00000214514.8 chr17:41634536:- OGDHL^ENSG00000197444.10 chr10:49752740:- NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr17--chr10]"] KRT18P55--IAH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE KRT18P55^ENSG00000265480.5 chr17:28307135:- IAH1^ENSG00000134330.19 chr2:9474582:+ NO_LDAS 0.0034 GT 1.5058 AG 1.2310 ["INTERCHROMOSOMAL[chr17--chr2]"] KRR1--NIPA1 1 0 1.00 0.00 ONLY_REF_SPLICE KRR1^ENSG00000111615.14 chr12:75511513:- NIPA1^ENSG00000170113.16 chr15:22810749:+ NO_LDAS 0.0034 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr15]"] KLRC4--KLRK1 1 0 1.00 0.00 INCL_NON_REF_SPLICE KLRC4^ENSG00000183542.5 chr12:10407636:- KLRK1^ENSG00000213809.9 chr12:10388875:- YES_LDAS 0.0034 GT 1.3996 AG 1.9219 ["HGNC_GENEFAM","ChimerSeq","INTRACHROMOSOMAL[chr12:0.02Mb]","NEIGHBORS[15508]"] KIFBP--AL162430.1 1 0 0.14 0.00 INCL_NON_REF_SPLICE KIFBP^ENSG00000198954.9 chr10:68989105:+ AL162430.1^ENSG00000233406.5 chr1:51251340:- YES_LDAS 0.0005 GT 1.7056 AG 1.5628 ["INTERCHROMOSOMAL[chr10--chr1]"] KIF13A--NR3C2 1 0 1.00 0.00 ONLY_REF_SPLICE KIF13A^ENSG00000137177.20 chr6:17898168:- NR3C2^ENSG00000151623.15 chr4:148152613:- NO_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr6--chr4]"] KIAA1328--ATP9B 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA1328^ENSG00000150477.15 chr18:36835376:+ ATP9B^ENSG00000166377.20 chr18:79143802:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8062 ["INTRACHROMOSOMAL[chr18:41.84Mb]"] KIAA0825--FAM172A 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA0825^ENSG00000185261.14 chr5:94384368:- FAM172A^ENSG00000113391.19 chr5:94074769:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["ChimerSeq","INTRACHROMOSOMAL[chr5:0.04Mb]","NEIGHBORS[41267]"] KIAA0753--LPIN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE KIAA0753^ENSG00000198920.11 chr17:6596324:- LPIN1^ENSG00000134324.12 chr2:11782393:+ NO_LDAS 0.0034 AT 1.7465 AC 1.9656 ["INTERCHROMOSOMAL[chr17--chr2]"] KIAA0586--TOMM20L 1 0 1.00 0.00 ONLY_REF_SPLICE KIAA0586^ENSG00000100578.18 chr14:58512627:+ TOMM20L^ENSG00000196860.8 chr14:58402680:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.02Mb]","LOCAL_REARRANGEMENT:+:[18683]"] KDELR2--IQCG 1 0 1.00 0.00 INCL_NON_REF_SPLICE KDELR2^ENSG00000136240.10 chr7:6463106:- IQCG^ENSG00000114473.14 chr3:197958823:- NO_LDAS 0.0034 GT 1.9086 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr3]"] KCTD9P2--AC091185.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE KCTD9P2^ENSG00000181819.14 chrX:105406795:+ AC091185.1^ENSG00000253476.1 chr8:25426327:- YES_LDAS 0.0017 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr8]"] KCNT2--MIER2 1 0 1.00 0.00 INCL_NON_REF_SPLICE KCNT2^ENSG00000162687.19 chr1:196342079:- MIER2^ENSG00000105556.11 chr19:313511:- NO_LDAS 0.0034 GT 1.5329 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr19]"] KCNQ1--AP001282.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE KCNQ1^ENSG00000053918.18 chr11:2528018:+ AP001282.1^ENSG00000213252.3 chr11:106826778:- YES_LDAS 0.0017 GT 1.8892 AG 1.9219 ["INTRACHROMOSOMAL[chr11:103.98Mb]"] KCNH2--NAGPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE KCNH2^ENSG00000055118.16 chr7:150948444:- NAGPA^ENSG00000103174.13 chr16:5025521:- NO_LDAS 0.0034 GT 1.5301 AG 1.5219 ["INTERCHROMOSOMAL[chr7--chr16]"] KATNAL2--EPG5 1 0 1.00 0.00 ONLY_REF_SPLICE KATNAL2^ENSG00000167216.17 chr18:46946923:+ EPG5^ENSG00000152223.15 chr18:45855687:- YES_LDAS 0.0034 GT 1.4566 AG 1.7819 ["INTRACHROMOSOMAL[chr18:0.95Mb]"] KASH5--C7orf50 1 0 1.00 0.00 INCL_NON_REF_SPLICE KASH5^ENSG00000161609.10 chr19:49395146:+ C7orf50^ENSG00000146540.15 chr7:1010086:- NO_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr7]"] KANK3--BTC 1 0 1.00 0.00 ONLY_REF_SPLICE KANK3^ENSG00000186994.11 chr19:8337795:- BTC^ENSG00000174808.12 chr4:74748149:- YES_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr19--chr4]"] KANK1--IL17RE 1 0 1.00 0.00 ONLY_REF_SPLICE KANK1^ENSG00000107104.20 chr9:473273:+ IL17RE^ENSG00000163701.19 chr3:9906364:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTERCHROMOSOMAL[chr9--chr3]"] JPH1--JPH4 1 0 0.50 0.00 ONLY_REF_SPLICE JPH1^ENSG00000104369.5 chr8:74237208:- JPH4^ENSG00000092051.17 chr14:23576456:- NO_LDAS 0.0017 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr8--chr14]"] JPH1--JPH3 1 0 0.50 0.00 ONLY_REF_SPLICE JPH1^ENSG00000104369.5 chr8:74237208:- JPH3^ENSG00000154118.13 chr16:87644258:+ NO_LDAS 0.0017 GT 1.5656 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr16]"] JMJD7--YJEFN3 1 0 1.00 0.00 ONLY_REF_SPLICE JMJD7^ENSG00000243789.11 chr15:41836551:+ YJEFN3^ENSG00000250067.12 chr19:19529364:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr19]"] JAZF1--AL023775.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE JAZF1^ENSG00000153814.13 chr7:28180463:- AL023775.1^ENSG00000235008.1 chr6:166702664:- NO_LDAS 0.0017 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chr6]"] ITFG2--DDT 1 0 1.00 0.00 ONLY_REF_SPLICE ITFG2^ENSG00000111203.13 chr12:2820225:+ DDT^ENSG00000099977.14 chr22:23971623:- YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr22]"] ITFG1--PHKB 1 0 1.00 0.00 ONLY_REF_SPLICE ITFG1^ENSG00000129636.13 chr16:47428804:- PHKB^ENSG00000102893.16 chr16:47497399:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["DEEPEST2019","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chr16:0.00Mb]","NEIGHBORS_OVERLAP:-:+:[3026]"] ISY1--ACSS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ISY1^ENSG00000240682.10 chr3:129130550:- ACSS1^ENSG00000154930.15 chr20:25012826:- NO_LDAS 0.0034 GT 1.8062 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr20]"] ISCA1--GOLM1 1 0 1.00 0.00 ONLY_REF_SPLICE ISCA1^ENSG00000135070.15 chr9:86272007:- GOLM1^ENSG00000135052.16 chr9:86079341:- YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr9:0.16Mb]"] IQCK--ZNF804B 1 0 1.00 0.00 INCL_NON_REF_SPLICE IQCK^ENSG00000174628.16 chr16:19735450:+ ZNF804B^ENSG00000182348.7 chr7:89338518:+ NO_LDAS 0.0034 GT 1.5656 AG 0.9183 ["INTERCHROMOSOMAL[chr16--chr7]"] IQCH-AS1--AC108471.3 1 0 0.50 0.00 INCL_NON_REF_SPLICE IQCH-AS1^ENSG00000259673.6 chr15:67519000:- AC108471.3^ENSG00000286349.1 chr4:39615146:+ YES_LDAS 0.0017 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr4]"] IPPK--ATG7 1 0 1.00 0.00 ONLY_REF_SPLICE IPPK^ENSG00000127080.10 chr9:92652573:- ATG7^ENSG00000197548.12 chr3:11298686:+ YES_LDAS 0.0034 GT 1.8295 AG 1.7968 ["INTERCHROMOSOMAL[chr9--chr3]"] IPP--AD001527.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IPP^ENSG00000197429.11 chr1:45727631:- AD001527.1^ENSG00000270760.1 chr19:36148044:- NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr19]"] IPO11--SREK1IP1 1 0 1.00 0.00 ONLY_REF_SPLICE IPO11^ENSG00000086200.17 chr5:62412929:+ SREK1IP1^ENSG00000153006.16 chr5:64741200:- NO_LDAS 0.0034 GT 1.5219 AG 1.9086 ["INTRACHROMOSOMAL[chr5:2.09Mb]"] INTS4--AC104073.4 1 0 1.00 0.00 ONLY_REF_SPLICE INTS4^ENSG00000149262.17 chr11:77891319:- AC104073.4^ENSG00000282381.1 chr7:65303529:+ YES_LDAS 0.0034 GT 1.9899 AG 1.6729 ["INTERCHROMOSOMAL[chr11--chr7]"] INSL3--NPR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE INSL3^ENSG00000248099.4 chr19:17821456:- NPR2^ENSG00000159899.15 chr9:35800389:+ NO_LDAS 0.0034 GT 1.5058 AG 1.7968 ["INTERCHROMOSOMAL[chr19--chr9]"] INSC--LINC02751 1 0 1.00 0.00 INCL_NON_REF_SPLICE INSC^ENSG00000188487.12 chr11:15269627:+ LINC02751^ENSG00000254946.2 chr11:15561878:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr11:0.31Mb]"] INPP4B--CNN3 1 0 1.00 0.00 ONLY_REF_SPLICE INPP4B^ENSG00000109452.12 chr4:142402938:- CNN3^ENSG00000117519.16 chr1:94903524:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr1]"] INPP4B--ACTR3B 1 0 1.00 0.00 INCL_NON_REF_SPLICE INPP4B^ENSG00000109452.12 chr4:142124649:- ACTR3B^ENSG00000133627.18 chr7:152820348:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr4--chr7]"] ING3--CMC4 1 0 1.00 0.00 ONLY_REF_SPLICE ING3^ENSG00000071243.16 chr7:120955624:+ CMC4^ENSG00000182712.16 chrX:155064033:- YES_LDAS 0.0034 GT 1.9086 AG 1.8295 ["INTERCHROMOSOMAL[chr7--chrX]"] IMPDH1--AC004623.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE IMPDH1^ENSG00000106348.18 chr7:128409756:- AC004623.1^ENSG00000279488.1 chr19:1373884:- NO_LDAS 0.0034 GT 1.8256 AG 1.4256 ["INTERCHROMOSOMAL[chr7--chr19]"] IMPA1--SLC10A5 1 0 1.00 0.00 INCL_NON_REF_SPLICE IMPA1^ENSG00000133731.10 chr8:81673841:- SLC10A5^ENSG00000253598.3 chr8:81694923:- YES_LDAS 0.0034 GT 1.8295 AG 1.6895 ["INTRACHROMOSOMAL[chr8:0.01Mb]","LOCAL_REARRANGEMENT:-:[7300]"] IMMP1L--ZNF607 1 0 1.00 0.00 INCL_NON_REF_SPLICE IMMP1L^ENSG00000148950.11 chr11:31488128:- ZNF607^ENSG00000198182.13 chr19:37711692:- YES_LDAS 0.0034 GT 1.9219 AG 1.3383 ["INTERCHROMOSOMAL[chr11--chr19]"] ILRUN--TMCO4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ILRUN^ENSG00000196821.10 chr6:34588913:- TMCO4^ENSG00000162542.14 chr1:19682807:- YES_LDAS 0.0034 GT 1.5301 AG 1.7232 ["INTERCHROMOSOMAL[chr6--chr1]"] IL7--AC068700.2 1 0 1.00 0.00 ONLY_REF_SPLICE IL7^ENSG00000104432.14 chr8:78798128:- AC068700.2^ENSG00000286675.1 chr8:78630426:- YES_LDAS 0.0034 GT 1.5656 AG 1.8892 ["INTRACHROMOSOMAL[chr8:0.01Mb]","NEIGHBORS[9761]"] IL22RA1--SMAP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE IL22RA1^ENSG00000142677.4 chr1:24137127:- SMAP2^ENSG00000084070.12 chr1:40414172:+ NO_LDAS 0.0034 GT 1.9899 AG 1.7056 ["INTRACHROMOSOMAL[chr1:16.20Mb]"] IL1RAP--CEP70 1 0 1.00 0.00 ONLY_REF_SPLICE IL1RAP^ENSG00000196083.10 chr3:190514219:+ CEP70^ENSG00000114107.9 chr3:138529462:- YES_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTRACHROMOSOMAL[chr3:51.92Mb]"] IL15RA--AC109630.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE IL15RA^ENSG00000134470.21 chr10:5977405:- AC109630.1^ENSG00000259269.2 chr15:39496646:+ NO_LDAS 0.0017 GT 1.2729 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr15]"] IL10RB--IFNAR2 1 0 1.00 0.00 ONLY_REF_SPLICE IL10RB^ENSG00000243646.10 chr21:33288261:+ IFNAR2^ENSG00000159110.20 chr21:33241886:+ NO_LDAS 0.0034 GT 1.8062 AG 1.6729 ["DGD_PARALOGS","INTRACHROMOSOMAL[chr21:0.00Mb]","LOCAL_REARRANGEMENT:+:[692]"] IK--TMEM254 1 0 1.00 0.00 ONLY_REF_SPLICE IK^ENSG00000113141.18 chr5:140655992:+ TMEM254^ENSG00000133678.14 chr10:80090797:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr10]"] IFT88--RRN3 1 0 1.00 0.00 ONLY_REF_SPLICE IFT88^ENSG00000032742.18 chr13:20598753:+ RRN3^ENSG00000085721.13 chr16:15073080:- YES_LDAS 0.0034 GT 1.9329 AG 1.8256 ["INTERCHROMOSOMAL[chr13--chr16]"] IFT43--TTC22 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFT43^ENSG00000119650.13 chr14:76059373:+ TTC22^ENSG00000006555.11 chr1:54782444:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr14--chr1]"] IFT43--FAM122C 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFT43^ENSG00000119650.13 chr14:75902224:+ FAM122C^ENSG00000156500.15 chrX:134835679:+ NO_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr14--chrX]"] IFT122--MAGT1 1 0 1.00 0.00 ONLY_REF_SPLICE IFT122^ENSG00000163913.12 chr3:129458015:+ MAGT1^ENSG00000102158.20 chrX:77870925:- NO_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chrX]"] IFFO2--NKIRAS2 1 0 1.00 0.00 INCL_NON_REF_SPLICE IFFO2^ENSG00000169991.11 chr1:18908530:- NKIRAS2^ENSG00000168256.18 chr17:42025204:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr17]"] HSPH1--WDFY2 1 0 1.00 0.00 ONLY_REF_SPLICE HSPH1^ENSG00000120694.20 chr13:31154633:- WDFY2^ENSG00000139668.9 chr13:51759740:+ YES_LDAS 0.0034 GT 1.6729 AG 1.9086 ["INTRACHROMOSOMAL[chr13:20.42Mb]"] HSPH1--ELAPOR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSPH1^ENSG00000120694.20 chr13:31149954:- ELAPOR1^ENSG00000116299.17 chr1:109204068:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr1]"] HSPE1--NBN 1 0 1.00 0.00 ONLY_REF_SPLICE HSPE1^ENSG00000115541.11 chr2:197501238:+ NBN^ENSG00000104320.14 chr8:89958854:- YES_LDAS 0.0034 GT 1.7819 AG 1.6049 ["INTERCHROMOSOMAL[chr2--chr8]"] HSPA1B--ASB17 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSPA1B^ENSG00000204388.7 chr6:31829997:+ ASB17^ENSG00000154007.7 chr1:75931917:- NO_LDAS 0.0034 GT 1.7232 AG 1.9899 ["INTERCHROMOSOMAL[chr6--chr1]"] HSF2--TAMM41 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSF2^ENSG00000025156.13 chr6:122432005:+ TAMM41^ENSG00000144559.10 chr3:11808629:- NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr3]"] HSDL2--EPB41L4A-AS1 1 0 0.50 0.00 INCL_NON_REF_SPLICE HSDL2^ENSG00000119471.15 chr9:112470563:+ EPB41L4A-AS1^ENSG00000224032.7 chr5:112160997:+ NO_LDAS 0.0017 GT 0.5665 AG 1.7056 ["INTERCHROMOSOMAL[chr9--chr5]"] HSBP1L1--BDH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HSBP1L1^ENSG00000226742.4 chr18:79966762:+ BDH1^ENSG00000161267.12 chr3:197522693:- NO_LDAS 0.0034 GT 1.6895 AG 1.3996 ["INTERCHROMOSOMAL[chr18--chr3]"] HRH4--IMPACT 1 0 1.00 0.00 INCL_NON_REF_SPLICE HRH4^ENSG00000134489.7 chr18:24477077:+ IMPACT^ENSG00000154059.11 chr18:24428869:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr18:0.01Mb]","LOCAL_REARRANGEMENT:+:[7106]"] HPCAL4--VSNL1 1 0 1.00 0.00 ONLY_REF_SPLICE HPCAL4^ENSG00000116983.13 chr1:39683937:- VSNL1^ENSG00000163032.12 chr2:17592070:+ NO_LDAS 0.0034 GT 1.9656 AG 1.6402 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr1--chr2]"] HOXB13--STRIP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HOXB13^ENSG00000159184.8 chr17:48728645:- STRIP1^ENSG00000143093.15 chr1:110041734:+ NO_LDAS 0.0034 GT 1.5546 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr1]"] HNRNPCP2--PLCH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPCP2^ENSG00000204253.4 chr2:189923644:+ PLCH2^ENSG00000149527.18 chr1:2479814:+ YES_LDAS 0.0034 AT 1.8892 AC 1.7968 ["INTERCHROMOSOMAL[chr2--chr1]"] HNRNPA1P3--HNRNPA1P7 1 0 1.00 0.00 INCL_NON_REF_SPLICE HNRNPA1P3^ENSG00000226188.2 chr20:45745982:- HNRNPA1P7^ENSG00000215492.6 chr18:32412975:- YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr18]"] HMOX2--NAGPA 1 0 1.00 0.00 ONLY_REF_SPLICE HMOX2^ENSG00000103415.12 chr16:4507012:+ NAGPA^ENSG00000103174.13 chr16:5031884:- YES_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.51Mb]"] HMGA1P4--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE HMGA1P4^ENSG00000234705.2 chr9:128684366:- PCCA^ENSG00000175198.17 chr13:100330561:+ NO_LDAS 0.0034 GT 1.9086 AG 1.8323 ["INTERCHROMOSOMAL[chr9--chr13]"] HMGA1P3--KIAA0753 1 0 0.50 0.00 INCL_NON_REF_SPLICE HMGA1P3^ENSG00000258011.2 chr12:110430108:- KIAA0753^ENSG00000198920.11 chr17:6607024:- YES_LDAS 0.0017 GC 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr17]"] HLF--NPM1P21 1 0 1.00 0.00 INCL_NON_REF_SPLICE HLF^ENSG00000108924.14 chr17:55265062:+ NPM1P21^ENSG00000248578.1 chr8:56101596:- NO_LDAS 0.0034 GT 0.9056 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr8]"] HLA-F-AS1--YJEFN3 1 0 1.00 0.00 ONLY_REF_SPLICE HLA-F-AS1^ENSG00000214922.9 chr6:29748900:- YJEFN3^ENSG00000250067.12 chr19:19535034:+ YES_LDAS 0.0034 GT 1.8295 AG 1.5301 ["INTERCHROMOSOMAL[chr6--chr19]"] HIGD1A--CCDC13 1 0 1.00 0.00 INCL_NON_REF_SPLICE HIGD1A^ENSG00000181061.14 chr3:42804436:- CCDC13^ENSG00000244607.7 chr3:42758346:- NO_LDAS 0.0034 GT 1.7465 AG 1.8323 ["ConjoinG","INTRACHROMOSOMAL[chr3:0.01Mb]","NEIGHBORS[9655]"] HHAT--SENP7 1 0 1.00 0.00 ONLY_REF_SPLICE HHAT^ENSG00000054392.13 chr1:210588099:+ SENP7^ENSG00000138468.16 chr3:101372126:- YES_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr3]"] HEXIM2--ZFAS1 1 0 1.00 0.00 ONLY_REF_SPLICE HEXIM2^ENSG00000168517.10 chr17:45162859:+ ZFAS1^ENSG00000177410.13 chr20:49289045:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr20]"] HERC4--TUBD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE HERC4^ENSG00000148634.16 chr10:67954595:- TUBD1^ENSG00000108423.15 chr17:59860353:- NO_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr17]"] HERC2P10--GOLGA8UP 1 0 1.00 0.00 ONLY_REF_SPLICE HERC2P10^ENSG00000259845.1 chr15:30836910:+ GOLGA8UP^ENSG00000103832.10 chr15:30793291:+ YES_LDAS 0.0034 GT 1.7968 AG 1.5058 ["INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_REARRANGEMENT:+:[13412]"] HELQ--ABRAXAS1 1 0 1.00 0.00 ONLY_REF_SPLICE HELQ^ENSG00000163312.11 chr4:83448783:- ABRAXAS1^ENSG00000163322.14 chr4:83469151:- YES_LDAS 0.0034 GT 1.8295 AG 1.9219 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr4:0.00Mb]","LOCAL_REARRANGEMENT:-:[3662]"] HELLS--FAM114A2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HELLS^ENSG00000119969.15 chr10:94571429:+ FAM114A2^ENSG00000055147.19 chr5:154029560:- NO_LDAS 0.0034 GT 1.2310 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr5]"] HELLPAR--PARPBP 1 0 1.00 0.00 INCL_NON_REF_SPLICE HELLPAR^ENSG00000281344.1 chr12:102205157:+ PARPBP^ENSG00000185480.12 chr12:102148230:+ YES_LDAS 0.0034 GT 1.5301 AG 1.9329 ["INTRACHROMOSOMAL[chr12:0.00Mb]","LOCAL_REARRANGEMENT:+:[65]"] HDHD5--DCAF17 1 0 0.25 0.00 INCL_NON_REF_SPLICE HDHD5^ENSG00000069998.12 chr22:17142964:- DCAF17^ENSG00000115827.14 chr2:171448681:+ NO_LDAS 0.0008 GT 1.9086 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr2]"] HDHD2--ZNF407 1 0 1.00 0.00 ONLY_REF_SPLICE HDHD2^ENSG00000167220.12 chr18:47150378:- ZNF407^ENSG00000215421.9 chr18:74781428:+ NO_LDAS 0.0034 GT 1.7232 AG 1.6402 ["INTRACHROMOSOMAL[chr18:27.45Mb]"] HCG9--TMEM61 1 0 1.00 0.00 INCL_NON_REF_SPLICE HCG9^ENSG00000204625.10 chr6:29975517:+ TMEM61^ENSG00000143001.5 chr1:54980954:+ NO_LDAS 0.0034 GT 1.1589 AG 1.7056 ["INTERCHROMOSOMAL[chr6--chr1]"] HAUS7--ECHDC2 1 0 1.00 0.00 INCL_NON_REF_SPLICE HAUS7^ENSG00000213397.11 chrX:153470828:- ECHDC2^ENSG00000121310.17 chr1:52911790:- NO_LDAS 0.0034 GT 1.2419 AG 1.9899 ["INTERCHROMOSOMAL[chrX--chr1]"] HAUS5--CLCN2 1 0 0.33 0.00 INCL_NON_REF_SPLICE HAUS5^ENSG00000249115.9 chr19:35618658:+ CLCN2^ENSG00000114859.16 chr3:184355460:- NO_LDAS 0.0011 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr19--chr3]"] HAUS3--MXD4 1 0 1.00 0.00 ONLY_REF_SPLICE HAUS3^ENSG00000214367.9 chr4:2080958:- MXD4^ENSG00000123933.17 chr4:2252522:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:-:[5156]"] H4C8--AC006122.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE H4C8^ENSG00000158406.5 chr6:26285448:- AC006122.1^ENSG00000213970.4 chr12:4324635:- YES_LDAS 0.0008 GT 1.6895 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr12]"] H3P35--H3P16 1 0 1.00 0.00 INCL_NON_REF_SPLICE H3P35^ENSG00000257287.1 chr12:72432001:- H3P16^ENSG00000178458.5 chr4:139698481:- NO_LDAS 0.0034 GT 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr4]"] H3C15--H3P17 1 0 1.00 0.00 INCL_NON_REF_SPLICE H3C15^ENSG00000203852.3 chr1:149852814:+ H3P17^ENSG00000248205.1 chr5:17502219:- NO_LDAS 0.0034 GC 1.7968 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr5]"] H2BC11--BVES 1 0 1.00 0.00 ONLY_REF_SPLICE H2BC11^ENSG00000124635.9 chr6:27132525:- BVES^ENSG00000112276.14 chr6:105133588:- YES_LDAS 0.0034 GT 1.9086 AG 1.6895 ["INTRACHROMOSOMAL[chr6:77.96Mb]"] GUCA1B--MRPS10 1 0 1.00 0.00 ONLY_REF_SPLICE GUCA1B^ENSG00000112599.9 chr6:42188582:- MRPS10^ENSG00000048544.6 chr6:42211917:- YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.01Mb]","LOCAL_REARRANGEMENT:-:[11851]"] GTPBP10--RFC1 1 0 1.00 0.00 ONLY_REF_SPLICE GTPBP10^ENSG00000105793.16 chr7:90346774:+ RFC1^ENSG00000035928.16 chr4:39304928:- YES_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr4]"] GTF2IP20--GTF2IP1 1 0 0.50 0.00 ONLY_REF_SPLICE GTF2IP20^ENSG00000272645.3 chr1:223988045:- GTF2IP1^ENSG00000277053.4 chr7:75210599:- NO_LDAS 0.0017 GT 1.9656 AG 1.5058 ["INTERCHROMOSOMAL[chr1--chr7]"] GTF2H5--MILR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTF2H5^ENSG00000272047.3 chr6:158170538:+ MILR1^ENSG00000271605.6 chr17:64468334:+ NO_LDAS 0.0034 GT 1.8256 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr17]"] GTF2E2--PCMTD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTF2E2^ENSG00000197265.9 chr8:30658137:- PCMTD2^ENSG00000203880.12 chr20:64255877:+ NO_LDAS 0.0034 GT 1.2419 AG 0.9183 ["INTERCHROMOSOMAL[chr8--chr20]"] GTDC1--PDP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GTDC1^ENSG00000121964.14 chr2:144145572:- PDP2^ENSG00000172840.7 chr16:66889483:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr16]"] GSDMB--AC105219.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE GSDMB^ENSG00000073605.18 chr17:39912326:- AC105219.3^ENSG00000254973.2 chr8:143758435:- YES_LDAS 0.0034 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr8]"] GRIN2C--ANKRD33 1 0 1.00 0.00 INCL_NON_REF_SPLICE GRIN2C^ENSG00000161509.14 chr17:74852640:- ANKRD33^ENSG00000167612.13 chr12:51888044:+ NO_LDAS 0.0034 GC 1.3996 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr12]"] GRID2--RAPGEF6 1 0 1.00 0.00 INCL_NON_REF_SPLICE GRID2^ENSG00000152208.13 chr4:93626367:+ RAPGEF6^ENSG00000158987.22 chr5:131603291:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr5]"] GPT--NENF 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPT^ENSG00000167701.14 chr8:144505530:+ NENF^ENSG00000117691.10 chr1:212433043:+ YES_LDAS 0.0034 GT 1.2366 AG 1.5546 ["INTERCHROMOSOMAL[chr8--chr1]"] GPSM2--EPM2A 1 0 1.00 0.00 ONLY_REF_SPLICE GPSM2^ENSG00000121957.15 chr1:108904254:+ EPM2A^ENSG00000112425.16 chr6:145627693:- YES_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr6]"] GPRIN2--NPY4R 1 0 0.50 0.00 INCL_NON_REF_SPLICE GPRIN2^ENSG00000204175.5 chr10:46550365:- NPY4R^ENSG00000204174.8 chr10:46462694:- YES_LDAS 0.0017 GT 1.9656 AG 1.9219 ["INTRACHROMOSOMAL[chr10:0.08Mb]","NEIGHBORS[83086]"] GPRC5D-AS1--MAOB 1 0 1.00 0.00 ONLY_REF_SPLICE GPRC5D-AS1^ENSG00000247498.10 chr12:12927803:+ MAOB^ENSG00000069535.14 chrX:43778739:- NO_LDAS 0.0034 GT 1.8323 AG 1.8256 ["INTERCHROMOSOMAL[chr12--chrX]"] GPRC5D-AS1--FAM234B 1 0 1.00 0.00 ONLY_REF_SPLICE GPRC5D-AS1^ENSG00000247498.10 chr12:12979622:+ FAM234B^ENSG00000084444.14 chr12:13055551:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5219 ["INTRACHROMOSOMAL[chr12:0.06Mb]","NEIGHBORS[59736]"] GPRASP1--ALDH2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPRASP1^ENSG00000198932.13 chrX:102651328:+ ALDH2^ENSG00000111275.13 chr12:111798133:+ YES_LDAS 0.0034 GT 1.5546 AG 1.6729 ["INTERCHROMOSOMAL[chrX--chr12]"] GPR173--WBP1P1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GPR173^ENSG00000184194.6 chrX:53049484:+ WBP1P1^ENSG00000231351.2 chr2:86930685:- YES_LDAS 0.0017 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chrX--chr2]"] GPM6A--SCLT1 1 0 1.00 0.00 ONLY_REF_SPLICE GPM6A^ENSG00000150625.16 chr4:175673680:- SCLT1^ENSG00000151466.12 chr4:128936851:- NO_LDAS 0.0034 GT 1.6895 AG 1.8295 ["ChimerSeq","INTRACHROMOSOMAL[chr4:46.54Mb]"] GPHN--MNAT1 1 0 1.00 0.00 ONLY_REF_SPLICE GPHN^ENSG00000171723.16 chr14:66965325:+ MNAT1^ENSG00000020426.11 chr14:60879714:+ YES_LDAS 0.0034 GT 1.5628 AG 1.9086 ["INTRACHROMOSOMAL[chr14:5.54Mb]"] GPATCH2L--CREBZF 1 0 1.00 0.00 ONLY_REF_SPLICE GPATCH2L^ENSG00000089916.18 chr14:76195972:+ CREBZF^ENSG00000137504.14 chr11:85663601:- YES_LDAS 0.0034 GT 1.8892 AG 1.3753 ["INTERCHROMOSOMAL[chr14--chr11]"] GPATCH2--SPATA17 1 0 1.00 0.00 INCL_NON_REF_SPLICE GPATCH2^ENSG00000092978.11 chr1:217610321:- SPATA17^ENSG00000162814.11 chr1:217741960:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_INVERSION:-:+:[234]"] GOLIM4--SCUBE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GOLIM4^ENSG00000173905.9 chr3:168029220:- SCUBE1^ENSG00000159307.19 chr22:43227480:- NO_LDAS 0.0034 GT 1.2310 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr22]"] GOLGA8H--AC019322.1 1 0 0.08 0.00 INCL_NON_REF_SPLICE GOLGA8H^ENSG00000261794.1 chr15:30607119:+ AC019322.1^ENSG00000263070.1 chr15:30386960:- NO_LDAS 0.0003 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr15:0.22Mb]"] GOLGA2P8--AC019294.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GOLGA2P8^ENSG00000214433.4 chr15:90295157:+ AC019294.1^ENSG00000187812.12 chr15:75786372:+ NO_LDAS 0.0034 GT 1.4566 AG 1.8062 ["INTRACHROMOSOMAL[chr15:14.51Mb]"] GOLGA2P2Y--AC100827.2 1 0 0.14 0.00 ONLY_REF_SPLICE GOLGA2P2Y^ENSG00000239533.6 chrY:24215462:- AC100827.2^ENSG00000260144.1 chr15:72607514:+ NO_LDAS 0.0005 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chrY--chr15]"] GNPAT--COG2 1 0 1.00 0.00 ONLY_REF_SPLICE GNPAT^ENSG00000116906.13 chr1:231241456:+ COG2^ENSG00000135775.14 chr1:230659464:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTRACHROMOSOMAL[chr1:0.55Mb]"] GNLY--SEC22B 1 0 0.50 0.00 INCL_NON_REF_SPLICE GNLY^ENSG00000115523.17 chr2:85696682:+ SEC22B^ENSG00000265808.4 chr1:120157192:- NO_LDAS 0.0017 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr2--chr1]"] GNAI3--AC126323.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246572:- NO_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] GNAI3--AC126323.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GNAI3^ENSG00000065135.12 chr1:109548838:+ AC126323.1^ENSG00000166104.15 chr15:62246254:- NO_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr15]"] GMFB--TIMMDC1 1 0 1.00 0.00 ONLY_REF_SPLICE GMFB^ENSG00000197045.13 chr14:54488925:- TIMMDC1^ENSG00000113845.10 chr3:119513641:+ YES_LDAS 0.0034 GT 1.7056 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr3]"] GMDS--ELOVL5 1 0 1.00 0.00 INCL_NON_REF_SPLICE GMDS^ENSG00000112699.11 chr6:1624054:- ELOVL5^ENSG00000012660.14 chr6:53273344:- NO_LDAS 0.0034 GC 1.3710 AG 1.8295 ["INTRACHROMOSOMAL[chr6:51.02Mb]"] GLYATL1--ZNF654 1 0 1.00 0.00 INCL_NON_REF_SPLICE GLYATL1^ENSG00000166840.13 chr11:58907955:+ ZNF654^ENSG00000175105.8 chr3:88140560:+ NO_LDAS 0.0034 GT 1.8062 AG 1.8295 ["INTERCHROMOSOMAL[chr11--chr3]"] GLIS3--SPATA6L 1 0 1.00 0.00 ONLY_REF_SPLICE GLIS3^ENSG00000107249.23 chr9:4286038:- SPATA6L^ENSG00000106686.16 chr9:4666256:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.20Mb]"] GLIS3--RFX3 1 0 1.00 0.00 ONLY_REF_SPLICE GLIS3^ENSG00000107249.23 chr9:4117768:- RFX3^ENSG00000080298.15 chr9:3346764:- YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr9:0.30Mb]"] GJB4--NFIA 1 0 1.00 0.00 INCL_NON_REF_SPLICE GJB4^ENSG00000189433.7 chr1:34762041:+ NFIA^ENSG00000162599.17 chr1:61359147:+ NO_LDAS 0.0034 GT 1.9086 AG 1.7968 ["INTRACHROMOSOMAL[chr1:26.10Mb]"] GFOD2--ENKD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE GFOD2^ENSG00000141098.13 chr16:67685457:- ENKD1^ENSG00000124074.12 chr16:67667093:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","NEIGHBORS[7266]"] GFM1--AP000547.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GFM1^ENSG00000168827.15 chr3:158646947:+ AP000547.1^ENSG00000233995.1 chr22:16574465:+ YES_LDAS 0.0017 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chr3--chr22]"] GEN1--MFSD8 1 0 1.00 0.00 ONLY_REF_SPLICE GEN1^ENSG00000178295.15 chr2:17753967:+ MFSD8^ENSG00000164073.11 chr4:127933093:- YES_LDAS 0.0034 GT 1.6402 AG 1.7968 ["INTERCHROMOSOMAL[chr2--chr4]"] GDF7--RUFY3 1 0 1.00 0.00 INCL_NON_REF_SPLICE GDF7^ENSG00000143869.7 chr2:20674474:+ RUFY3^ENSG00000018189.13 chr4:70704894:+ NO_LDAS 0.0034 GT 1.6895 AG 1.7056 ["INTERCHROMOSOMAL[chr2--chr4]"] GDAP1--MIR2052HG 1 0 1.00 0.00 ONLY_REF_SPLICE GDAP1^ENSG00000104381.14 chr8:74363053:+ MIR2052HG^ENSG00000254349.6 chr8:74702379:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.08Mb]","NEIGHBORS[81768]"] GCSH--CLYBL 1 0 1.00 0.00 ONLY_REF_SPLICE GCSH^ENSG00000140905.11 chr16:81096131:- CLYBL^ENSG00000125246.15 chr13:99772824:+ YES_LDAS 0.0034 GT 1.5301 AG 1.9899 ["INTERCHROMOSOMAL[chr16--chr13]"] GCOM2--AC084824.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE GCOM2^ENSG00000227725.3 chr4:68038685:+ AC084824.1^ENSG00000257511.1 chr12:32726636:- YES_LDAS 0.0017 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr12]"] GATA2-AS1--ZFYVE21 1 0 1.00 0.00 ONLY_REF_SPLICE GATA2-AS1^ENSG00000244300.3 chr3:128490069:+ ZFYVE21^ENSG00000100711.14 chr14:103726792:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr14]"] GATA2-AS1--UBE2J2 1 0 1.00 0.00 ONLY_REF_SPLICE GATA2-AS1^ENSG00000244300.3 chr3:128490069:+ UBE2J2^ENSG00000160087.21 chr1:1267992:- YES_LDAS 0.0034 GT 1.8256 AG 1.8256 ["INTERCHROMOSOMAL[chr3--chr1]"] GARNL3--SCAI 1 0 1.00 0.00 ONLY_REF_SPLICE GARNL3^ENSG00000136895.19 chr9:127357377:+ SCAI^ENSG00000173611.18 chr9:125056007:- YES_LDAS 0.0034 GT 1.7465 AG 1.9219 ["INTRACHROMOSOMAL[chr9:2.08Mb]"] GAREM1--AC011825.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GAREM1^ENSG00000141441.16 chr18:32287031:- AC011825.2^ENSG00000263393.1 chr18:32124154:- YES_LDAS 0.0034 GT 1.8323 AG 1.8323 ["INTRACHROMOSOMAL[chr18:0.00Mb]","NEIGHBORS[399]"] GALNS--GMEB2 1 0 1.00 0.00 ONLY_REF_SPLICE GALNS^ENSG00000141012.13 chr16:88856758:- GMEB2^ENSG00000101216.11 chr20:63619454:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr20]"] GALK2--FGF7 1 0 1.00 0.00 ONLY_REF_SPLICE GALK2^ENSG00000156958.15 chr15:49217313:+ FGF7^ENSG00000140285.12 chr15:49483151:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7968 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr15:0.06Mb]","NEIGHBORS[55368]"] GALK2--COPS2 1 0 1.00 0.00 ONLY_REF_SPLICE GALK2^ENSG00000156958.15 chr15:49170358:+ COPS2^ENSG00000166200.15 chr15:49137437:- YES_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr15:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[5]"] GACAT2--LCMT2 1 0 1.00 0.00 INCL_NON_REF_SPLICE GACAT2^ENSG00000265962.1 chr18:8707539:- LCMT2^ENSG00000168806.8 chr15:43326756:- NO_LDAS 0.0034 GT 1.4566 AG 1.7056 ["INTERCHROMOSOMAL[chr18--chr15]"] GABARAPL1--CNOT11 1 0 1.00 0.00 INCL_NON_REF_SPLICE GABARAPL1^ENSG00000139112.11 chr12:10221893:+ CNOT11^ENSG00000158435.8 chr2:101266771:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr2]"] G2E3-AS1--ADAP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE G2E3-AS1^ENSG00000257636.6 chr14:30492717:- ADAP2^ENSG00000184060.11 chr17:30953288:+ NO_LDAS 0.0034 GT 1.9329 AG 1.6895 ["INTERCHROMOSOMAL[chr14--chr17]"] FYCO1--ZNF618 1 0 1.00 0.00 ONLY_REF_SPLICE FYCO1^ENSG00000163820.15 chr3:45931071:- ZNF618^ENSG00000157657.14 chr9:114001996:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr9]"] FXN--CBWD6 1 0 0.50 0.00 ONLY_REF_SPLICE FXN^ENSG00000165060.15 chr9:69043561:+ CBWD6^ENSG00000215126.10 chr9:41156439:- NO_LDAS 0.0017 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr9:27.84Mb]"] FUT8--TMX4 1 0 1.00 0.00 ONLY_REF_SPLICE FUT8^ENSG00000033170.17 chr14:65455718:+ TMX4^ENSG00000125827.9 chr20:8010315:- YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr20]"] FUT8--RIC8B 1 0 1.00 0.00 INCL_NON_REF_SPLICE FUT8^ENSG00000033170.17 chr14:65629606:+ RIC8B^ENSG00000111785.21 chr12:106815230:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr14--chr12]"] FSIP1--ARHGEF5 1 0 1.00 0.00 INCL_NON_REF_SPLICE FSIP1^ENSG00000150667.8 chr15:39782628:- ARHGEF5^ENSG00000050327.15 chr7:144362676:+ NO_LDAS 0.0034 GT 1.4566 AG 1.7465 ["INTERCHROMOSOMAL[chr15--chr7]"] FP565260.3--ATP5F1E 1 0 0.50 0.00 INCL_NON_REF_SPLICE FP565260.3^ENSG00000277117.5 chr21:5036720:+ ATP5F1E^ENSG00000124172.10 chr20:59030429:- NO_LDAS 0.0017 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr21--chr20]"] FOXO1--LINC00598 1 0 1.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40470162:- YES_LDAS 0.0034 GT 1.7232 AG 1.8295 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 1 0 1.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40460406:- YES_LDAS 0.0034 GT 1.7232 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXO1--LINC00598 1 0 1.00 0.00 ONLY_REF_SPLICE FOXO1^ENSG00000150907.10 chr13:40665583:- LINC00598^ENSG00000215483.11 chr13:40097967:- YES_LDAS 0.0034 GT 1.7232 AG 1.9656 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr13:0.02Mb]","NEIGHBORS[19860]"] FOXN3--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE FOXN3^ENSG00000053254.16 chr14:89411934:- DCTD^ENSG00000129187.15 chr4:182915575:- NO_LDAS 0.0034 GT 1.5628 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr4]"] FO393418.1--NRG1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FO393418.1^ENSG00000223695.1 chr22:36396215:+ NRG1^ENSG00000157168.20 chr8:32763748:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr8]"] FNTA--STAU2 1 0 1.00 0.00 ONLY_REF_SPLICE FNTA^ENSG00000168522.13 chr8:43064215:+ STAU2^ENSG00000040341.18 chr8:73617451:- YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chr8:30.33Mb]"] FNBP1L--RPAP2 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1L^ENSG00000137942.18 chr1:93499583:+ RPAP2^ENSG00000122484.9 chr1:92323445:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr1:1.05Mb]"] FNBP1L--PINX1 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1L^ENSG00000137942.18 chr1:93448305:+ PINX1^ENSG00000254093.9 chr8:10826244:- NO_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr8]"] FNBP1L--DNTTIP2 1 0 1.00 0.00 ONLY_REF_SPLICE FNBP1L^ENSG00000137942.18 chr1:93499583:+ DNTTIP2^ENSG00000067334.14 chr1:93873214:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.31Mb]"] FGGY--C11orf80 1 0 1.00 0.00 INCL_NON_REF_SPLICE FGGY^ENSG00000172456.18 chr1:59378837:+ C11orf80^ENSG00000173715.18 chr11:66815758:+ NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr1--chr11]"] FGFR1OP2--NELFCD 1 0 1.00 0.00 ONLY_REF_SPLICE FGFR1OP2^ENSG00000111790.14 chr12:26957743:+ NELFCD^ENSG00000101158.15 chr20:58991881:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chr20]"] FGF7P3--ZNF23 1 0 1.00 0.00 ONLY_REF_SPLICE FGF7P3^ENSG00000204837.5 chr9:39830013:- ZNF23^ENSG00000167377.18 chr16:71449882:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr16]"] FGD4--INTS13 1 0 1.00 0.00 ONLY_REF_SPLICE FGD4^ENSG00000139132.15 chr12:32399959:+ INTS13^ENSG00000064102.15 chr12:26928905:- NO_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr12:5.46Mb]"] FEZ1--C11orf98 1 0 1.00 0.00 ONLY_REF_SPLICE FEZ1^ENSG00000149557.14 chr11:125463484:- C11orf98^ENSG00000278615.5 chr11:62664973:- YES_LDAS 0.0034 GT 1.9086 AG 1.5628 ["INTRACHROMOSOMAL[chr11:62.78Mb]"] FER1L5--RPS12P5 1 0 1.00 0.00 INCL_NON_REF_SPLICE FER1L5^ENSG00000249715.13 chr2:96647886:+ RPS12P5^ENSG00000226216.1 chr3:29390908:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr3]"] FEN1--AC006122.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE FEN1^ENSG00000168496.4 chr11:61796333:+ AC006122.1^ENSG00000213970.4 chr12:4324623:- YES_LDAS 0.0008 GT 1.8892 AG 1.5219 ["INTERCHROMOSOMAL[chr11--chr12]"] FEM1C--DCP2 1 0 1.00 0.00 ONLY_REF_SPLICE FEM1C^ENSG00000145780.8 chr5:115542950:- DCP2^ENSG00000172795.17 chr5:112985835:+ YES_LDAS 0.0034 GT 1.6402 AG 1.8295 ["INTRACHROMOSOMAL[chr5:2.50Mb]"] FEM1C--CCDC112 1 0 1.00 0.00 ONLY_REF_SPLICE FEM1C^ENSG00000145780.8 chr5:115542950:- CCDC112^ENSG00000164221.13 chr5:115284908:- YES_LDAS 0.0034 GT 1.6402 AG 1.6895 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr5:0.22Mb]"] FDPSP5--GAL3ST1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FDPSP5^ENSG00000215035.2 chrX:44476198:- GAL3ST1^ENSG00000128242.13 chr22:30557401:- NO_LDAS 0.0034 GT 1.3996 AG 1.8323 ["INTERCHROMOSOMAL[chrX--chr22]"] FCN3--CD164L2 1 0 1.00 0.00 ONLY_REF_SPLICE FCN3^ENSG00000142748.13 chr1:27370596:- CD164L2^ENSG00000174950.11 chr1:27382399:- YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.00Mb]","LOCAL_REARRANGEMENT:-:[4352]"] FCHO1--RNF167 1 0 1.00 0.00 INCL_NON_REF_SPLICE FCHO1^ENSG00000130475.14 chr19:17783101:+ RNF167^ENSG00000108523.16 chr17:4940749:+ YES_LDAS 0.0034 GT 1.1589 AG 1.5058 ["INTERCHROMOSOMAL[chr19--chr17]"] FBXO24--GZF1 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBXO24^ENSG00000106336.13 chr7:100584777:+ GZF1^ENSG00000125812.16 chr20:23364363:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr20]"] FBN1--AC084757.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE FBN1^ENSG00000166147.14 chr15:48610728:- AC084757.2^ENSG00000259469.1 chr15:48729540:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTRACHROMOSOMAL[chr15:0.08Mb]","LOCAL_REARRANGEMENT:-:[83359]"] FARS2--AC093249.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE FARS2^ENSG00000145982.13 chr6:5368846:+ AC093249.2^ENSG00000260167.1 chr16:30585922:+ NO_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTERCHROMOSOMAL[chr6--chr16]"] FAR2P1--DTNB 1 0 1.00 0.00 ONLY_REF_SPLICE FAR2P1^ENSG00000180178.11 chr2:130028309:- DTNB^ENSG00000138101.19 chr2:25628384:- YES_LDAS 0.0034 GT 1.7819 AG 1.7232 ["INTRACHROMOSOMAL[chr2:104.34Mb]"] FANCD2--UBE3D 1 0 1.00 0.00 ONLY_REF_SPLICE FANCD2^ENSG00000144554.12 chr3:10032423:+ UBE3D^ENSG00000118420.17 chr6:83024038:- NO_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chr6]"] FANCC--AOPEP 1 0 1.00 0.00 ONLY_REF_SPLICE FANCC^ENSG00000158169.13 chr9:95135346:- AOPEP^ENSG00000148120.17 chr9:94792765:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.01Mb]","LOCAL_INVERSION:-:+:[11895]"] FAM86DP--LINC02014 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM86DP^ENSG00000244026.6 chr3:75426450:- LINC02014^ENSG00000248243.1 chr3:130090818:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr3:54.65Mb]"] FAM219B--BEND7 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM219B^ENSG00000178761.15 chr15:74900217:- BEND7^ENSG00000165626.17 chr10:13452658:- YES_LDAS 0.0034 GC 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr10]"] FAM20C--PRKAR1B 1 0 1.00 0.00 ONLY_REF_SPLICE FAM20C^ENSG00000177706.9 chr7:208976:+ PRKAR1B^ENSG00000188191.15 chr7:711527:- YES_LDAS 0.0034 GT 1.8892 AG 1.5656 ["Klijn_CellLines","INTRACHROMOSOMAL[chr7:0.29Mb]"] FAM20C--AC091390.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM20C^ENSG00000177706.9 chr7:197583:+ AC091390.3^ENSG00000239969.5 chr7:102366018:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTRACHROMOSOMAL[chr7:102.10Mb]"] FAM177A1--PRORP 1 0 1.00 0.00 ONLY_REF_SPLICE FAM177A1^ENSG00000151327.13 chr14:35102729:+ PRORP^ENSG00000100890.16 chr14:35122952:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9329 ["INTRACHROMOSOMAL[chr14:0.01Mb]","NEIGHBORS[8716]"] FAM172A--DEPDC1B 1 0 1.00 0.00 ONLY_REF_SPLICE FAM172A^ENSG00000113391.19 chr5:94050731:- DEPDC1B^ENSG00000035499.13 chr5:60687227:- YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr5:32.92Mb]"] FAM149B1--AC008267.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM149B1^ENSG00000138286.15 chr10:73168386:+ AC008267.3^ENSG00000234500.1 chr7:66520992:+ NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr7]"] FAM13A--LINC01997 1 0 1.00 0.00 ONLY_REF_SPLICE FAM13A^ENSG00000138640.15 chr4:88938088:- LINC01997^ENSG00000241383.2 chr3:169005995:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr3]"] FAM135A--BCKDHB 1 0 1.00 0.00 ONLY_REF_SPLICE FAM135A^ENSG00000082269.17 chr6:70502791:+ BCKDHB^ENSG00000083123.15 chr6:80273135:+ NO_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr6:9.55Mb]"] FAM126A--SEC11A 1 0 1.00 0.00 INCL_NON_REF_SPLICE FAM126A^ENSG00000122591.13 chr7:22938280:- SEC11A^ENSG00000140612.14 chr15:84680832:- NO_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr15]"] FAM114A2--FBXO9 1 0 1.00 0.00 ONLY_REF_SPLICE FAM114A2^ENSG00000055147.19 chr5:154038857:- FBXO9^ENSG00000112146.17 chr6:53076486:+ NO_LDAS 0.0034 GT 1.7232 AG 1.9656 ["INTERCHROMOSOMAL[chr5--chr6]"] FAM107B--STAM 1 0 1.00 0.00 ONLY_REF_SPLICE FAM107B^ENSG00000065809.14 chr10:14604240:- STAM^ENSG00000136738.15 chr10:17700191:+ YES_LDAS 0.0034 GT 1.6895 AG 1.5546 ["INTRACHROMOSOMAL[chr10:2.87Mb]"] FAH--ZFAND6 1 0 1.00 0.00 ONLY_REF_SPLICE FAH^ENSG00000103876.13 chr15:80168316:+ ZFAND6^ENSG00000086666.19 chr15:80120328:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_REARRANGEMENT:+:[14097]"] EXT1--FAM210B 1 0 0.50 0.00 INCL_NON_REF_SPLICE EXT1^ENSG00000182197.12 chr8:118110541:- FAM210B^ENSG00000124098.10 chr20:56365087:+ NO_LDAS 0.0017 GT 1.8892 AG 1.4566 ["INTERCHROMOSOMAL[chr8--chr20]"] EXOC4--LRGUK 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC4^ENSG00000131558.15 chr7:134007835:+ LRGUK^ENSG00000155530.3 chr7:134191655:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9219 ["Klijn_CellLines","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[60710]"] EXOC4--LRGUK 1 0 1.00 0.00 INCL_NON_REF_SPLICE EXOC4^ENSG00000131558.15 chr7:134007835:+ LRGUK^ENSG00000155530.3 chr7:134158022:+ NO_LDAS 0.0034 GT 1.9899 AG 1.9086 ["Klijn_CellLines","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[60710]"] EXOC2--CCDC66 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC2^ENSG00000112685.14 chr6:572520:- CCDC66^ENSG00000180376.17 chr3:56618172:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr3]"] EXOC1--DNTTIP2 1 0 1.00 0.00 ONLY_REF_SPLICE EXOC1^ENSG00000090989.18 chr4:55899884:+ DNTTIP2^ENSG00000067334.14 chr1:93873214:- YES_LDAS 0.0034 GT 1.6402 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr1]"] EVI5L--IPO11 1 0 1.00 0.00 INCL_NON_REF_SPLICE EVI5L^ENSG00000142459.8 chr19:7863067:+ IPO11^ENSG00000086200.17 chr5:62403995:+ NO_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr19--chr5]"] ERVK13-1--TOR1B 1 0 1.00 0.00 ONLY_REF_SPLICE ERVK13-1^ENSG00000260565.7 chr16:2682140:- TOR1B^ENSG00000136816.16 chr9:129808905:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr9]"] ERLIN1--LINC01297 1 0 1.00 0.00 INCL_NON_REF_SPLICE ERLIN1^ENSG00000107566.14 chr10:100167348:- LINC01297^ENSG00000274827.4 chr14:19384391:- NO_LDAS 0.0034 GT 1.4295 AG 1.5329 ["INTERCHROMOSOMAL[chr10--chr14]"] ERH--CA13 1 0 1.00 0.00 ONLY_REF_SPLICE ERH^ENSG00000100632.11 chr14:69386963:- CA13^ENSG00000185015.8 chr8:85281230:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr8]"] ERFE--RECQL 1 0 1.00 0.00 INCL_NON_REF_SPLICE ERFE^ENSG00000178752.16 chr2:238167725:+ RECQL^ENSG00000004700.16 chr12:21483574:- NO_LDAS 0.0034 GT 1.8295 AG 1.8256 ["INTERCHROMOSOMAL[chr2--chr12]"] EPHA1--AC008132.1 1 0 0.06 0.00 INCL_NON_REF_SPLICE EPHA1^ENSG00000146904.9 chr7:143390635:- AC008132.1^ENSG00000161103.11 chr22:18847398:+ NO_LDAS 0.0002 GT 1.8256 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr22]"] EPB41L5--PTPN4 1 0 1.00 0.00 ONLY_REF_SPLICE EPB41L5^ENSG00000115109.14 chr2:120042110:+ PTPN4^ENSG00000088179.9 chr2:119920069:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8295 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.03Mb]","LOCAL_REARRANGEMENT:+:[28178]"] EPB41L5--PTPN4 1 0 1.00 0.00 ONLY_REF_SPLICE EPB41L5^ENSG00000115109.14 chr2:120019264:+ PTPN4^ENSG00000088179.9 chr2:119932424:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["DEEPEST2019","TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.03Mb]","LOCAL_REARRANGEMENT:+:[28178]"] EML1--GFY 1 0 1.00 0.00 INCL_NON_REF_SPLICE EML1^ENSG00000066629.18 chr14:99920877:+ GFY^ENSG00000261949.7 chr19:49423870:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7968 ["INTERCHROMOSOMAL[chr14--chr19]"] ELP2--CMAS 1 0 1.00 0.00 ONLY_REF_SPLICE ELP2^ENSG00000134759.14 chr18:36141201:+ CMAS^ENSG00000111726.13 chr12:22060832:+ YES_LDAS 0.0034 GT 1.7232 AG 1.7056 ["INTERCHROMOSOMAL[chr18--chr12]"] ELOVL2-AS1--SYCP2L 1 0 1.00 0.00 ONLY_REF_SPLICE ELOVL2-AS1^ENSG00000230314.7 chr6:11047999:+ SYCP2L^ENSG00000153157.13 chr6:10956136:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr6:0.06Mb]","LOCAL_REARRANGEMENT:+:[64162]"] ELOC--MKRN3 1 0 1.00 0.00 ONLY_REF_SPLICE ELOC^ENSG00000154582.17 chr8:73972077:- MKRN3^ENSG00000179455.10 chr15:23566808:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr15]"] ELOA--ZNF165 1 0 1.00 0.00 INCL_NON_REF_SPLICE ELOA^ENSG00000011007.12 chr1:23749077:+ ZNF165^ENSG00000197279.4 chr6:28085616:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] ELAC1--SMAD4 1 0 1.00 0.00 ONLY_REF_SPLICE ELAC1^ENSG00000141642.9 chr18:50974561:+ SMAD4^ENSG00000141646.14 chr18:51046920:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["ChimerSeq","INTRACHROMOSOMAL[chr18:0.04Mb]","NEIGHBORS[40273]"] EIF4E2--AC009075.2 1 0 0.25 0.00 INCL_NON_REF_SPLICE EIF4E2^ENSG00000135930.14 chr2:232558018:+ AC009075.2^ENSG00000261774.1 chr16:72278298:+ NO_LDAS 0.0008 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr16]"] EIF2AK3--SAMD3 1 0 1.00 0.00 ONLY_REF_SPLICE EIF2AK3^ENSG00000172071.14 chr2:88613724:- SAMD3^ENSG00000164483.17 chr6:130184623:- YES_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr6]"] EFR3B--H2AC4 1 0 1.00 0.00 INCL_NON_REF_SPLICE EFR3B^ENSG00000084710.14 chr2:25146569:+ H2AC4^ENSG00000278463.2 chr6:26033576:- NO_LDAS 0.0034 GT 1.8295 AG 1.8062 ["INTERCHROMOSOMAL[chr2--chr6]"] EFCAB2--KIF26B 1 0 1.00 0.00 ONLY_REF_SPLICE EFCAB2^ENSG00000203666.12 chr1:245083688:+ KIF26B^ENSG00000162849.16 chr1:245366834:+ YES_LDAS 0.0034 GT 1.7465 AG 1.7819 ["INTRACHROMOSOMAL[chr1:0.03Mb]","NEIGHBORS[27821]"] EEF1AKMT3--TSFM 1 0 1.00 0.00 ONLY_REF_SPLICE EEF1AKMT3^ENSG00000123427.17 chr12:57773128:+ TSFM^ENSG00000123297.20 chr12:57783110:+ YES_LDAS 0.0034 GT 1.7968 AG 1.5656 ["INTRACHROMOSOMAL[chr12:0.00Mb]","NEIGHBORS[220]"] EEF1AKMT2--AL121769.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE EEF1AKMT2^ENSG00000203791.15 chr10:124789043:- AL121769.1^ENSG00000242163.1 chr14:81332990:- NO_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr14]"] EEF1AKMT1--INTS4 1 0 1.00 0.00 ONLY_REF_SPLICE EEF1AKMT1^ENSG00000150456.11 chr13:20757455:- INTS4^ENSG00000149262.17 chr11:77961138:- NO_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTERCHROMOSOMAL[chr13--chr11]"] EEA1--TMEM258 1 0 1.00 0.00 ONLY_REF_SPLICE EEA1^ENSG00000102189.17 chr12:92832512:- TMEM258^ENSG00000134825.16 chr11:61790602:- YES_LDAS 0.0034 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr11]"] EDRF1-DT--FRA10AC1 1 0 1.00 0.00 ONLY_REF_SPLICE EDRF1-DT^ENSG00000224023.10 chr10:125719422:- FRA10AC1^ENSG00000148690.12 chr10:93700106:- NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr10:32.00Mb]"] EAF1--PPP2R5E 1 0 1.00 0.00 INCL_NON_REF_SPLICE EAF1^ENSG00000144597.14 chr3:15432195:+ PPP2R5E^ENSG00000154001.14 chr14:63374243:- NO_LDAS 0.0034 GT 1.9219 AG 1.8323 ["INTERCHROMOSOMAL[chr3--chr14]"] DYNC1I2--ICE2 1 0 0.50 0.00 ONLY_REF_SPLICE DYNC1I2^ENSG00000077380.16 chr2:171692894:+ ICE2^ENSG00000128915.12 chr15:60478069:- YES_LDAS 0.0017 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr2--chr15]"] DVL2--POLD4 1 0 1.00 0.00 INCL_NON_REF_SPLICE DVL2^ENSG00000004975.12 chr17:7230316:- POLD4^ENSG00000175482.9 chr11:67352709:- NO_LDAS 0.0034 GC 1.5656 AG 1.7232 ["INTERCHROMOSOMAL[chr17--chr11]"] DUS3L--AP001324.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE DUS3L^ENSG00000141994.16 chr19:5788357:- AP001324.3^ENSG00000279353.1 chr11:74699256:- NO_LDAS 0.0034 GT 1.4256 AG 1.8323 ["INTERCHROMOSOMAL[chr19--chr11]"] DTX4--DTX2P1 1 0 1.00 0.00 ONLY_REF_SPLICE DTX4^ENSG00000110042.8 chr11:59172806:+ DTX2P1^ENSG00000186704.9 chr7:76980621:+ NO_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr7]"] DTX2P1--TNFRSF11A 1 0 1.00 0.00 INCL_NON_REF_SPLICE DTX2P1^ENSG00000186704.9 chr7:77002321:+ TNFRSF11A^ENSG00000141655.17 chr18:62389144:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr7--chr18]"] DTWD2--TNFAIP8 1 0 1.00 0.00 ONLY_REF_SPLICE DTWD2^ENSG00000169570.10 chr5:118988294:- TNFAIP8^ENSG00000145779.8 chr5:119392816:+ YES_LDAS 0.0034 GT 1.8323 AG 1.9899 ["INTRACHROMOSOMAL[chr5:0.28Mb]"] DTWD2--TAB1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DTWD2^ENSG00000169570.10 chr5:118839037:- TAB1^ENSG00000100324.14 chr22:39426703:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr22]"] DTWD1--SEC62 1 0 1.00 0.00 ONLY_REF_SPLICE DTWD1^ENSG00000104047.15 chr15:49625431:+ SEC62^ENSG00000008952.17 chr3:169982707:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr3]"] DTNB--DNMT3A 1 0 1.00 0.00 ONLY_REF_SPLICE DTNB^ENSG00000138101.19 chr2:25652594:- DNMT3A^ENSG00000119772.17 chr2:25282711:- YES_LDAS 0.0034 GT 1.9086 AG 1.7968 ["INTRACHROMOSOMAL[chr2:0.03Mb]","NEIGHBORS[34608]"] DTD2--G2E3 1 0 1.00 0.00 ONLY_REF_SPLICE DTD2^ENSG00000129480.13 chr14:31457283:- G2E3^ENSG00000092140.16 chr14:30601770:+ YES_LDAS 0.0034 GT 1.7232 AG 1.5546 ["INTRACHROMOSOMAL[chr14:0.83Mb]"] DSTN--AC073840.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DSTN^ENSG00000125868.16 chr20:17601042:+ AC073840.1^ENSG00000286035.1 chr4:83084051:+ NO_LDAS 0.0034 GT 1.0530 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr4]"] DRC3--YRDC 1 0 1.00 0.00 INCL_NON_REF_SPLICE DRC3^ENSG00000171962.18 chr17:17993823:+ YRDC^ENSG00000196449.4 chr1:37808148:- NO_LDAS 0.0034 GC 1.6402 AG 1.3996 ["INTERCHROMOSOMAL[chr17--chr1]"] DRAM1--MREG 1 0 1.00 0.00 ONLY_REF_SPLICE DRAM1^ENSG00000136048.14 chr12:101890221:+ MREG^ENSG00000118242.16 chr2:215996465:- NO_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr2]"] DRAM1--AC079907.1 1 0 1.00 0.00 ONLY_REF_SPLICE DRAM1^ENSG00000136048.14 chr12:101901433:+ AC079907.1^ENSG00000257222.1 chr12:102074408:+ NO_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTRACHROMOSOMAL[chr12:0.05Mb]","NEIGHBORS[51225]"] DPM1--CERNA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DPM1^ENSG00000000419.13 chr20:50945737:- CERNA1^ENSG00000259577.2 chr15:52205277:+ NO_LDAS 0.0034 GT 1.7968 AG 1.4256 ["INTERCHROMOSOMAL[chr20--chr15]"] DPH6--TRIM67 1 0 1.00 0.00 INCL_NON_REF_SPLICE DPH6^ENSG00000134146.12 chr15:35373517:- TRIM67^ENSG00000119283.15 chr1:231197446:+ NO_LDAS 0.0034 GT 1.7056 AG 1.9219 ["INTERCHROMOSOMAL[chr15--chr1]"] DPH5--LDHAL6EP 1 0 1.00 0.00 INCL_NON_REF_SPLICE DPH5^ENSG00000117543.21 chr1:100992637:- LDHAL6EP^ENSG00000270098.1 chr4:71436985:- NO_LDAS 0.0034 GT 1.4295 AG 1.1589 ["INTERCHROMOSOMAL[chr1--chr4]"] DOK1--CRYBG3 1 0 1.00 0.00 INCL_NON_REF_SPLICE DOK1^ENSG00000115325.14 chr2:74555324:+ CRYBG3^ENSG00000080200.10 chr3:97872545:+ NO_LDAS 0.0034 GT 1.6402 AG 1.7465 ["INTERCHROMOSOMAL[chr2--chr3]"] DNTTIP2--FNBP1L 1 0 1.00 0.00 ONLY_REF_SPLICE DNTTIP2^ENSG00000067334.14 chr1:93879077:- FNBP1L^ENSG00000137942.18 chr1:93546842:+ YES_LDAS 0.0034 GT 1.9086 AG 1.7968 ["INTRACHROMOSOMAL[chr1:0.31Mb]"] DNM1L--CPNE2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNM1L^ENSG00000087470.19 chr12:32707387:+ CPNE2^ENSG00000140848.17 chr16:57110900:+ NO_LDAS 0.0034 GT 1.5628 AG 1.7968 ["INTERCHROMOSOMAL[chr12--chr16]"] DNM1L--AMN1 1 0 1.00 0.00 ONLY_REF_SPLICE DNM1L^ENSG00000087470.19 chr12:32701562:+ AMN1^ENSG00000151743.11 chr12:31689118:- NO_LDAS 0.0034 GT 1.5329 AG 1.8256 ["INTRACHROMOSOMAL[chr12:0.95Mb]"] DNAL4--DCTD 1 0 1.00 0.00 ONLY_REF_SPLICE DNAL4^ENSG00000100246.13 chr22:38794068:- DCTD^ENSG00000129187.15 chr4:182915575:- YES_LDAS 0.0034 GT 1.5058 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr4]"] DNAJC22--SDHAP1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DNAJC22^ENSG00000178401.16 chr12:49351498:+ SDHAP1^ENSG00000185485.14 chr3:195960086:- YES_LDAS 0.0017 GT 1.7968 AG 1.8062 ["INTERCHROMOSOMAL[chr12--chr3]"] DNAJC2--PSMC2 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC2^ENSG00000105821.15 chr7:103319609:- PSMC2^ENSG00000161057.13 chr7:103366076:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7968 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr7:0.02Mb]","NEIGHBORS_OVERLAP:-:+:[16260]"] DNAJC19--DNAJC19P5 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJC19^ENSG00000205981.8 chr3:180985926:- DNAJC19P5^ENSG00000225808.1 chr2:177229255:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr3--chr2]"] DNAJC17--RAD51 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJC17^ENSG00000104129.10 chr15:40773727:- RAD51^ENSG00000051180.17 chr15:40709025:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTRACHROMOSOMAL[chr15:0.03Mb]","LOCAL_INVERSION:-:+:[32821]"] DNAJB11--AC022400.7 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJB11^ENSG00000090520.12 chr3:186585483:+ AC022400.7^ENSG00000279689.1 chr10:73769433:- YES_LDAS 0.0034 GT 0.9183 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr10]"] DNAJA1--SMDT1 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJA1^ENSG00000086061.16 chr9:33037115:+ SMDT1^ENSG00000183172.9 chr22:42083119:+ NO_LDAS 0.0034 GT 1.8323 AG 1.6402 ["INTERCHROMOSOMAL[chr9--chr22]"] DNAJA1--BHLHE41 1 0 1.00 0.00 INCL_NON_REF_SPLICE DNAJA1^ENSG00000086061.16 chr9:33025387:+ BHLHE41^ENSG00000123095.6 chr12:26124785:- NO_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr12]"] DNAJA1--ARMC5 1 0 1.00 0.00 ONLY_REF_SPLICE DNAJA1^ENSG00000086061.16 chr9:33026990:+ ARMC5^ENSG00000140691.18 chr16:31461922:+ YES_LDAS 0.0034 GT 0.9968 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr16]"] DMTF1--DCDC2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE DMTF1^ENSG00000135164.19 chr7:87171089:+ DCDC2B^ENSG00000222046.2 chr1:32215503:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr7--chr1]"] DMBX1--SEMA7A 1 0 1.00 0.00 INCL_NON_REF_SPLICE DMBX1^ENSG00000197587.11 chr1:46512649:+ SEMA7A^ENSG00000138623.10 chr15:74411680:- NO_LDAS 0.0034 GT 1.7465 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chr15]"] DMAC2L--UBE2Q2P1 1 0 0.50 0.00 ONLY_REF_SPLICE DMAC2L^ENSG00000125375.17 chr14:50322719:+ UBE2Q2P1^ENSG00000189136.9 chr15:84526876:- YES_LDAS 0.0017 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr15]"] DHX29--PTCD2 1 0 1.00 0.00 ONLY_REF_SPLICE DHX29^ENSG00000067248.10 chr5:55274614:- PTCD2^ENSG00000049883.15 chr5:72358203:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr5:17.01Mb]"] DHTKD1--AC008805.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DHTKD1^ENSG00000181192.12 chr10:12091684:+ AC008805.2^ENSG00000267555.1 chr19:32831308:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr19]"] DHFR--MRPL1 1 0 0.50 0.00 ONLY_REF_SPLICE DHFR^ENSG00000228716.7 chr5:80654008:- MRPL1^ENSG00000169288.18 chr4:77871744:+ YES_LDAS 0.0017 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr5--chr4]"] DHDDS--AL121970.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DHDDS^ENSG00000117682.17 chr1:26442873:+ AL121970.1^ENSG00000236389.1 chr6:134706498:- NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr6]"] DESI2--FLVCR1 1 0 1.00 0.00 ONLY_REF_SPLICE DESI2^ENSG00000121644.19 chr1:244653355:+ FLVCR1^ENSG00000162769.13 chr1:212863725:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr1:31.75Mb]"] DERL1--NAA20 1 0 1.00 0.00 ONLY_REF_SPLICE DERL1^ENSG00000136986.10 chr8:123024986:- NAA20^ENSG00000173418.12 chr20:20025677:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr20]"] DEPDC1B--PDE4D 1 0 1.00 0.00 ONLY_REF_SPLICE DEPDC1B^ENSG00000035499.13 chr5:60638750:- PDE4D^ENSG00000113448.19 chr5:60185687:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["Klijn_CellLines","TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr5:0.07Mb]","NEIGHBORS[74792]"] DENND5B--ARNTL2 1 0 1.00 0.00 ONLY_REF_SPLICE DENND5B^ENSG00000170456.16 chr12:31590706:- ARNTL2^ENSG00000029153.14 chr12:27368262:+ YES_LDAS 0.0034 GT 1.7968 AG 1.5656 ["INTRACHROMOSOMAL[chr12:3.96Mb]"] DENND4A--AQP7 1 0 1.00 0.00 INCL_NON_REF_SPLICE DENND4A^ENSG00000174485.16 chr15:65676445:- AQP7^ENSG00000165269.13 chr9:33383687:- NO_LDAS 0.0034 GT 1.9899 AG 1.7819 ["INTERCHROMOSOMAL[chr15--chr9]"] DENND2B--DZIP1L 1 0 1.00 0.00 ONLY_REF_SPLICE DENND2B^ENSG00000166444.19 chr11:8713998:- DZIP1L^ENSG00000158163.15 chr3:138068367:- YES_LDAS 0.0034 GT 1.8892 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr3]"] DENND11--NDUFB2 1 0 1.00 0.00 ONLY_REF_SPLICE DENND11^ENSG00000257093.7 chr7:141685478:- NDUFB2^ENSG00000090266.13 chr7:140702866:+ YES_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTRACHROMOSOMAL[chr7:0.93Mb]"] DENND10--METTL16 1 0 1.00 0.00 ONLY_REF_SPLICE DENND10^ENSG00000119979.18 chr10:119108164:+ METTL16^ENSG00000127804.13 chr17:2420904:- YES_LDAS 0.0034 GT 1.8323 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr17]"] DEGS1--NVL 1 0 1.00 0.00 ONLY_REF_SPLICE DEGS1^ENSG00000143753.13 chr1:224183418:+ NVL^ENSG00000143748.18 chr1:224250318:- YES_LDAS 0.0034 GT 1.7968 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.03Mb]","LOCAL_INVERSION:+:-:[33893]"] DEGS1--GPR137B 1 0 1.00 0.00 ONLY_REF_SPLICE DEGS1^ENSG00000143753.13 chr1:224183418:+ GPR137B^ENSG00000077585.14 chr1:236178414:+ NO_LDAS 0.0034 GT 1.7968 AG 1.6895 ["INTRACHROMOSOMAL[chr1:11.95Mb]"] DEGS1--ATF3 1 0 1.00 0.00 ONLY_REF_SPLICE DEGS1^ENSG00000143753.13 chr1:224183418:+ ATF3^ENSG00000162772.17 chr1:212615018:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8892 ["INTRACHROMOSOMAL[chr1:11.55Mb]"] DEF8--METTL3 1 0 1.00 0.00 ONLY_REF_SPLICE DEF8^ENSG00000140995.17 chr16:89955266:+ METTL3^ENSG00000165819.12 chr14:21501129:- YES_LDAS 0.0034 GT 1.5058 AG 1.6402 ["INTERCHROMOSOMAL[chr16--chr14]"] DDX59--MCAT 1 0 1.00 0.00 ONLY_REF_SPLICE DDX59^ENSG00000118197.14 chr1:200648439:- MCAT^ENSG00000100294.13 chr22:43141249:- NO_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTERCHROMOSOMAL[chr1--chr22]"] DDX59--ABHD15 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX59^ENSG00000118197.14 chr1:200669876:- ABHD15^ENSG00000168792.5 chr17:29566839:- YES_LDAS 0.0034 GT 1.4566 AG 1.5301 ["INTERCHROMOSOMAL[chr1--chr17]"] DDX55--AC068620.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDX55^ENSG00000111364.16 chr12:123606159:+ AC068620.1^ENSG00000269921.1 chr4:56387694:+ NO_LDAS 0.0034 GT 1.6729 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr4]"] DDX27--AC008481.1 1 0 0.20 0.00 INCL_NON_REF_SPLICE DDX27^ENSG00000124228.15 chr20:49233342:+ AC008481.1^ENSG00000213303.3 chr19:11523731:+ YES_LDAS 0.0007 AT 1.5628 AC 1.9086 ["INTERCHROMOSOMAL[chr20--chr19]"] DDTL--SPAG8 1 0 0.50 0.00 ONLY_REF_SPLICE DDTL^ENSG00000099974.8 chr22:23967561:+ SPAG8^ENSG00000137098.14 chr9:35808306:- YES_LDAS 0.0017 GT 1.7056 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr9]"] DDTL--MRPL45P2 1 0 0.50 0.00 ONLY_REF_SPLICE DDTL^ENSG00000099974.8 chr22:23967561:+ MRPL45P2^ENSG00000228782.7 chr17:47456793:- YES_LDAS 0.0017 GT 1.7056 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr17]"] DDT--SPAG8 1 0 0.50 0.00 ONLY_REF_SPLICE DDT^ENSG00000099977.14 chr22:23973768:- SPAG8^ENSG00000137098.14 chr9:35808306:- YES_LDAS 0.0017 GT 1.7056 AG 1.9899 ["INTERCHROMOSOMAL[chr22--chr9]"] DDT--MRPL45P2 1 0 0.50 0.00 ONLY_REF_SPLICE DDT^ENSG00000099977.14 chr22:23973768:- MRPL45P2^ENSG00000228782.7 chr17:47456793:- YES_LDAS 0.0017 GT 1.7056 AG 1.9219 ["INTERCHROMOSOMAL[chr22--chr17]"] DDR2--RGS5 1 0 1.00 0.00 ONLY_REF_SPLICE DDR2^ENSG00000162733.19 chr1:162655374:+ RGS5^ENSG00000143248.13 chr1:163168368:- YES_LDAS 0.0034 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr1:0.32Mb]"] DDIT4L--KIF14 1 0 1.00 0.00 INCL_NON_REF_SPLICE DDIT4L^ENSG00000145358.6 chr4:100188121:- KIF14^ENSG00000118193.12 chr1:200618179:- YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr1]"] DDAH1--BCL10 1 0 1.00 0.00 ONLY_REF_SPLICE DDAH1^ENSG00000153904.21 chr1:85464743:- BCL10^ENSG00000142867.14 chr1:85270906:- YES_LDAS 0.0034 GT 1.3996 AG 1.8323 ["INTRACHROMOSOMAL[chr1:0.04Mb]","NEIGHBORS[41853]"] DCTD--TRPM6 1 0 1.00 0.00 INCL_NON_REF_SPLICE DCTD^ENSG00000129187.15 chr4:182891403:- TRPM6^ENSG00000119121.22 chr9:74782476:- NO_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr9]"] DCAKD--LINC02862 1 0 0.33 0.00 INCL_NON_REF_SPLICE DCAKD^ENSG00000172992.12 chr17:45013487:- LINC02862^ENSG00000237571.1 chr2:215277608:+ NO_LDAS 0.0011 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr2]"] DCAKD--ELP4 1 0 0.33 0.00 INCL_NON_REF_SPLICE DCAKD^ENSG00000172992.12 chr17:45013487:- ELP4^ENSG00000109911.19 chr11:31580683:+ NO_LDAS 0.0011 GT 1.9899 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr11]"] DCAKD--CCDC144NL 1 0 0.33 0.00 INCL_NON_REF_SPLICE DCAKD^ENSG00000172992.12 chr17:45013487:- CCDC144NL^ENSG00000205212.5 chr17:20837111:- NO_LDAS 0.0011 GT 1.9899 AG 1.8062 ["INTRACHROMOSOMAL[chr17:24.13Mb]"] DCAF11--PSTPIP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE DCAF11^ENSG00000100897.18 chr14:24118458:+ PSTPIP2^ENSG00000152229.18 chr18:45992202:- NO_LDAS 0.0034 GT 1.8062 AG 1.9219 ["INTERCHROMOSOMAL[chr14--chr18]"] DAPK1--FPR2 1 0 0.50 0.00 INCL_NON_REF_SPLICE DAPK1^ENSG00000196730.13 chr9:87647403:+ FPR2^ENSG00000171049.9 chr19:51769618:+ NO_LDAS 0.0017 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr19]"] DAPK1--FPR1 1 0 0.50 0.00 INCL_NON_REF_SPLICE DAPK1^ENSG00000196730.13 chr9:87647403:+ FPR1^ENSG00000171051.9 chr19:51746038:- NO_LDAS 0.0017 GT 1.6895 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr19]"] DAPK1--AC139491.6 1 0 1.00 0.00 INCL_NON_REF_SPLICE DAPK1^ENSG00000196730.13 chr9:87640847:+ AC139491.6^ENSG00000283559.2 chr5:176155439:- NO_LDAS 0.0034 GT 1.9656 AG 1.7232 ["INTERCHROMOSOMAL[chr9--chr5]"] CYTOR--MRPS9 1 0 0.50 0.00 ONLY_REF_SPLICE CYTOR^ENSG00000222041.11 chr2:87455645:+ MRPS9^ENSG00000135972.9 chr2:105071313:+ YES_LDAS 0.0017 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr2:17.40Mb]"] CYP2C23P--CLCN2 1 0 0.33 0.00 INCL_NON_REF_SPLICE CYP2C23P^ENSG00000283232.1 chr10:100122527:- CLCN2^ENSG00000114859.16 chr3:184355460:- NO_LDAS 0.0011 GT 1.6895 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr3]"] CYP24A1--ATAD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYP24A1^ENSG00000019186.10 chr20:54157169:- ATAD1^ENSG00000138138.14 chr10:87753498:- NO_LDAS 0.0034 GT 1.9656 AG 1.6895 ["INTERCHROMOSOMAL[chr20--chr10]"] CYP20A1--AC084838.1 1 0 1.00 0.00 ONLY_REF_SPLICE CYP20A1^ENSG00000119004.16 chr2:203272748:+ AC084838.1^ENSG00000255076.2 chr8:14879300:- NO_LDAS 0.0034 GT 1.6729 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr8]"] CYB5D1--MVD 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYB5D1^ENSG00000182224.12 chr17:7858824:+ MVD^ENSG00000167508.12 chr16:88663115:- YES_LDAS 0.0034 GT 1.8256 AG 1.6402 ["INTERCHROMOSOMAL[chr17--chr16]"] CYB561D2--EIF1B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYB561D2^ENSG00000114395.11 chr3:50351560:+ EIF1B^ENSG00000114784.4 chr3:40309871:+ YES_LDAS 0.0034 GT 1.7968 AG 1.9656 ["INTRACHROMOSOMAL[chr3:10.05Mb]"] CYB561A3--LINC00279 1 0 1.00 0.00 INCL_NON_REF_SPLICE CYB561A3^ENSG00000162144.10 chr11:61356533:- LINC00279^ENSG00000286217.2 chrY:8633049:+ NO_LDAS 0.0034 GT 1.7819 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chrY]"] CXorf56--NDUFA1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CXorf56^ENSG00000018610.15 chrX:119539672:- NDUFA1^ENSG00000125356.7 chrX:119876514:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8256 ["INTRACHROMOSOMAL[chrX:0.31Mb]"] CUTC--ELF4 1 0 1.00 0.00 ONLY_REF_SPLICE CUTC^ENSG00000119929.13 chr10:99736317:+ ELF4^ENSG00000102034.17 chrX:130081312:- YES_LDAS 0.0034 GT 1.5628 AG 1.9219 ["INTERCHROMOSOMAL[chr10--chrX]"] CUL2--FAM221B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CUL2^ENSG00000108094.16 chr10:35062960:- FAM221B^ENSG00000204930.10 chr9:35818016:- NO_LDAS 0.0034 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr9]"] CU633906.5--RAB41 1 0 1.00 0.00 INCL_NON_REF_SPLICE CU633906.5^ENSG00000288187.1 chr21:6216499:- RAB41^ENSG00000147127.8 chrX:70282261:+ NO_LDAS 0.0034 GT 1.2419 AG 1.6895 ["INTERCHROMOSOMAL[chr21--chrX]"] CTTNBP2--ELAPOR2 1 0 1.00 0.00 ONLY_REF_SPLICE CTTNBP2^ENSG00000077063.11 chr7:117861209:- ELAPOR2^ENSG00000164659.15 chr7:86926916:- YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTRACHROMOSOMAL[chr7:30.65Mb]"] CTSC--RAB38 1 0 1.00 0.00 ONLY_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88296133:- RAB38^ENSG00000123892.12 chr11:88149955:- YES_LDAS 0.0034 GT 1.9899 AG 1.8062 ["GTEx_recurrent_StarF2019","Babiceanu_Normal","ChimerSeq","Greger_Normal","INTRACHROMOSOMAL[chr11:0.09Mb]","NEIGHBORS[89626]"] CTSC--DCTN6 1 0 1.00 0.00 INCL_NON_REF_SPLICE CTSC^ENSG00000109861.17 chr11:88337556:- DCTN6^ENSG00000104671.8 chr8:30164164:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr11--chr8]"] CTDSPL2--PRPF38A 1 0 1.00 0.00 ONLY_REF_SPLICE CTDSPL2^ENSG00000137770.14 chr15:44459200:+ PRPF38A^ENSG00000134748.13 chr1:52408569:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr1]"] CTAGE15--ARHGEF5 1 0 0.20 0.00 INCL_NON_REF_SPLICE CTAGE15^ENSG00000271079.1 chr7:143571949:+ ARHGEF5^ENSG00000050327.15 chr7:144371299:+ NO_LDAS 0.0007 GT 1.9656 AG 1.9219 ["INTRACHROMOSOMAL[chr7:0.78Mb]"] CSTA--TPRG1 1 0 1.00 0.00 ONLY_REF_SPLICE CSTA^ENSG00000121552.4 chr3:122325358:+ TPRG1^ENSG00000188001.10 chr3:189215292:+ YES_LDAS 0.0034 GT 1.5850 AG 1.7968 ["INTRACHROMOSOMAL[chr3:66.61Mb]"] CSNK1G1--EDC3 1 0 1.00 0.00 ONLY_REF_SPLICE CSNK1G1^ENSG00000169118.18 chr15:64300319:- EDC3^ENSG00000179151.13 chr15:74675142:- NO_LDAS 0.0034 GT 1.9086 AG 1.9086 ["INTRACHROMOSOMAL[chr15:10.27Mb]"] CSGALNACT2--MGME1 1 0 1.00 0.00 ONLY_REF_SPLICE CSGALNACT2^ENSG00000169826.8 chr10:43138567:+ MGME1^ENSG00000125871.14 chr20:17988166:+ YES_LDAS 0.0034 GT 1.3383 AG 1.8892 ["INTERCHROMOSOMAL[chr10--chr20]"] CS--TLR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CS^ENSG00000062485.19 chr12:56286595:- TLR2^ENSG00000137462.9 chr4:153706248:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTERCHROMOSOMAL[chr12--chr4]"] CRYL1--RHBDL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRYL1^ENSG00000165475.15 chr13:20432102:- RHBDL1^ENSG00000103269.14 chr16:676053:+ NO_LDAS 0.0034 GT 1.7232 AG 1.5546 ["INTERCHROMOSOMAL[chr13--chr16]"] CRYBG3--TMSB15B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRYBG3^ENSG00000080200.10 chr3:97822355:+ TMSB15B^ENSG00000158427.15 chrX:103931139:+ NO_LDAS 0.0034 GT 1.6895 AG 1.8062 ["INTERCHROMOSOMAL[chr3--chrX]"] CRY1--KLHDC2 1 0 1.00 0.00 ONLY_REF_SPLICE CRY1^ENSG00000008405.12 chr12:106992787:- KLHDC2^ENSG00000165516.11 chr14:49771594:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8295 ["INTERCHROMOSOMAL[chr12--chr14]"] CRNDE--USH1C 1 0 1.00 0.00 INCL_NON_REF_SPLICE CRNDE^ENSG00000245694.10 chr16:54925212:- USH1C^ENSG00000006611.17 chr11:17522926:- NO_LDAS 0.0034 GT 1.8323 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr11]"] CREM--CCDC7 1 0 1.00 0.00 ONLY_REF_SPLICE CREM^ENSG00000095794.19 chr10:35179276:+ CCDC7^ENSG00000216937.13 chr10:32451592:+ YES_LDAS 0.0034 GT 1.8256 AG 1.5850 ["INTRACHROMOSOMAL[chr10:2.24Mb]"] CR2--ZNF717 1 0 1.00 0.00 INCL_NON_REF_SPLICE CR2^ENSG00000117322.18 chr1:207477954:+ ZNF717^ENSG00000227124.11 chr3:75736919:- NO_LDAS 0.0034 GT 1.6729 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] COX6A1--BCLAF3 1 0 1.00 0.00 ONLY_REF_SPLICE COX6A1^ENSG00000111775.3 chr12:120438521:+ BCLAF3^ENSG00000173681.16 chrX:19917334:- YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr12--chrX]"] COX18--SEC11C 1 0 1.00 0.00 INCL_NON_REF_SPLICE COX18^ENSG00000163626.17 chr4:73061895:- SEC11C^ENSG00000166562.9 chr18:59152565:+ NO_LDAS 0.0034 GT 1.5546 AG 1.8892 ["INTERCHROMOSOMAL[chr4--chr18]"] COX15--HERC4 1 0 1.00 0.00 ONLY_REF_SPLICE COX15^ENSG00000014919.13 chr10:99727441:- HERC4^ENSG00000148634.16 chr10:67955130:- YES_LDAS 0.0034 GT 1.6895 AG 1.9329 ["INTRACHROMOSOMAL[chr10:31.64Mb]"] COX11--COQ2 1 0 1.00 0.00 ONLY_REF_SPLICE COX11^ENSG00000166260.13 chr17:54963306:- COQ2^ENSG00000173085.15 chr4:83279114:- YES_LDAS 0.0034 GT 1.6402 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr4]"] CORO2B--TEAD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CORO2B^ENSG00000103647.13 chr15:68645364:+ TEAD3^ENSG00000007866.22 chr6:35475981:- NO_LDAS 0.0034 GT 1.8892 AG 1.3996 ["INTERCHROMOSOMAL[chr15--chr6]"] COQ2--AC004847.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE COQ2^ENSG00000173085.15 chr4:83273496:- AC004847.1^ENSG00000260997.1 chr7:44959448:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr4--chr7]"] COPS2--AC018638.8 1 0 0.13 0.00 INCL_NON_REF_SPLICE COPS2^ENSG00000166200.15 chr15:49119045:- AC018638.8^ENSG00000281896.1 chr7:128617868:+ YES_LDAS 0.0004 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr7]"] COMMD2--ATP1B3 1 0 1.00 0.00 INCL_NON_REF_SPLICE COMMD2^ENSG00000114744.9 chr3:149752406:- ATP1B3^ENSG00000069849.11 chr3:141876881:+ YES_LDAS 0.0034 GC 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr3:7.81Mb]"] COL4A3--COA5 1 0 1.00 0.00 ONLY_REF_SPLICE COL4A3^ENSG00000169031.20 chr2:227310948:+ COA5^ENSG00000183513.9 chr2:98602645:- NO_LDAS 0.0034 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chr2:128.56Mb]"] COG3--FAHD2A 1 0 1.00 0.00 INCL_NON_REF_SPLICE COG3^ENSG00000136152.15 chr13:45465137:+ FAHD2A^ENSG00000115042.10 chr2:95412476:+ YES_LDAS 0.0034 GC 1.5219 AG 1.8892 ["INTERCHROMOSOMAL[chr13--chr2]"] COA5--KIF5C 1 0 0.25 0.00 INCL_NON_REF_SPLICE COA5^ENSG00000183513.9 chr2:98604111:- KIF5C^ENSG00000168280.18 chr2:148978973:+ NO_LDAS 0.0008 GT 1.7465 AG 1.8256 ["INTRACHROMOSOMAL[chr2:50.27Mb]"] CNTNAP3C--BX005040.4 1 0 1.00 0.00 ONLY_REF_SPLICE CNTNAP3C^ENSG00000283378.1 chr9:61453030:+ BX005040.4^ENSG00000283541.1 chr9:61097039:- YES_LDAS 0.0034 GT 1.8295 AG 1.9086 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] CNTNAP3C--BX005040.4 1 0 1.00 0.00 ONLY_REF_SPLICE CNTNAP3C^ENSG00000283378.1 chr9:61331052:+ BX005040.4^ENSG00000283541.1 chr9:61082046:- YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] CNTLN--IVNS1ABP 1 0 1.00 0.00 ONLY_REF_SPLICE CNTLN^ENSG00000044459.15 chr9:17226287:+ IVNS1ABP^ENSG00000116679.16 chr1:185305643:- YES_LDAS 0.0034 GT 1.8295 AG 1.9329 ["INTERCHROMOSOMAL[chr9--chr1]"] CNOT10--TTC13 1 0 1.00 0.00 ONLY_REF_SPLICE CNOT10^ENSG00000182973.19 chr3:32762863:+ TTC13^ENSG00000143643.13 chr1:230961303:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["HGNC_GENEFAM","INTERCHROMOSOMAL[chr3--chr1]"] CNGB1--GAR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CNGB1^ENSG00000070729.14 chr16:57949361:- GAR1^ENSG00000109534.17 chr4:109822405:+ NO_LDAS 0.0034 GT 0.9710 AG 1.9086 ["INTERCHROMOSOMAL[chr16--chr4]"] CLYBL--PCCA 1 0 1.00 0.00 ONLY_REF_SPLICE CLYBL^ENSG00000125246.15 chr13:99859049:+ PCCA^ENSG00000175198.17 chr13:100425633:+ YES_LDAS 0.0034 GT 1.8323 AG 1.4566 ["INTRACHROMOSOMAL[chr13:0.19Mb]"] CLPX--ACSM2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE CLPX^ENSG00000166855.9 chr15:65164029:- ACSM2B^ENSG00000066813.14 chr16:20536835:- NO_LDAS 0.0034 GT 1.7968 AG 0.9183 ["INTERCHROMOSOMAL[chr15--chr16]"] CLDN15--FIS1 1 0 1.00 0.00 ONLY_REF_SPLICE CLDN15^ENSG00000106404.14 chr7:101237365:- FIS1^ENSG00000214253.9 chr7:101244139:- YES_LDAS 0.0034 GT 1.5656 AG 1.3710 ["INTRACHROMOSOMAL[chr7:0.00Mb]","LOCAL_REARRANGEMENT:-:[638]"] CLCF1--POLD4 1 0 1.00 0.00 ONLY_REF_SPLICE CLCF1^ENSG00000175505.11 chr11:67373524:- POLD4^ENSG00000175482.9 chr11:67353077:- YES_LDAS 0.0034 GT 1.9086 AG 1.5058 ["ConjoinG","INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[7196]"] CKLF--CMTM1 1 0 1.00 0.00 ONLY_REF_SPLICE CKLF^ENSG00000217555.13 chr16:66552793:+ CMTM1^ENSG00000089505.18 chr16:66577104:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9329 ["ConjoinG","INTRACHROMOSOMAL[chr16:0.00Mb]","NEIGHBORS[142]"] CISD2--ZMYND11 1 0 1.00 0.00 ONLY_REF_SPLICE CISD2^ENSG00000145354.12 chr4:102869187:+ ZMYND11^ENSG00000015171.20 chr10:179994:+ YES_LDAS 0.0034 GT 1.9656 AG 1.6049 ["INTERCHROMOSOMAL[chr4--chr10]"] CIBAR1--TUBE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CIBAR1^ENSG00000188343.13 chr8:93705010:+ TUBE1^ENSG00000074935.14 chr6:112086904:- YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTERCHROMOSOMAL[chr8--chr6]"] CIB1--ATP5MF 1 0 1.00 0.00 ONLY_REF_SPLICE CIB1^ENSG00000185043.12 chr15:90233669:- ATP5MF^ENSG00000241468.8 chr7:99460193:- YES_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr15--chr7]"] CHST11--SLC41A2 1 0 1.00 0.00 ONLY_REF_SPLICE CHST11^ENSG00000171310.11 chr12:104601991:+ SLC41A2^ENSG00000136052.9 chr12:104805337:- YES_LDAS 0.0034 GT 1.7056 AG 1.8295 ["Klijn_CellLines","INTRACHROMOSOMAL[chr12:0.04Mb]","LOCAL_INVERSION:+:-:[40539]"] CHN1--ZNF830 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHN1^ENSG00000128656.15 chr2:175005263:- ZNF830^ENSG00000198783.6 chr17:34962113:+ NO_LDAS 0.0034 GT 1.1589 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr17]"] CHMP7--AC100861.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHMP7^ENSG00000147457.14 chr8:23260648:+ AC100861.1^ENSG00000246582.3 chr8:23225805:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr8:0.01Mb]","LOCAL_REARRANGEMENT:+:[12711]"] CHMP4C--TERF1 1 0 1.00 0.00 ONLY_REF_SPLICE CHMP4C^ENSG00000164695.5 chr8:81732816:+ TERF1^ENSG00000147601.15 chr8:73045961:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr8:8.68Mb]"] CHMP4A--ZNF721 1 0 1.00 0.00 INCL_NON_REF_SPLICE CHMP4A^ENSG00000254505.11 chr14:24210756:- ZNF721^ENSG00000182903.16 chr4:444432:- NO_LDAS 0.0034 GT 1.8323 AG 1.7232 ["INTERCHROMOSOMAL[chr14--chr4]"] CHMP4A--IRF9 1 0 1.00 0.00 ONLY_REF_SPLICE CHMP4A^ENSG00000254505.11 chr14:24210348:- IRF9^ENSG00000213928.9 chr14:24164063:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr14:0.04Mb]","LOCAL_INVERSION:-:+:[43050]"] CHML--TSNAX 1 0 1.00 0.00 ONLY_REF_SPLICE CHML^ENSG00000203668.3 chr1:241639882:- TSNAX^ENSG00000116918.15 chr1:231542481:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr1:10.06Mb]"] CHM--AC117394.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CHM^ENSG00000188419.14 chrX:86027491:- AC117394.1^ENSG00000241671.1 chr3:153129193:- YES_LDAS 0.0017 GT 1.8295 AG 1.8295 ["INTERCHROMOSOMAL[chrX--chr3]"] CHKA--ZNF343 1 0 1.00 0.00 ONLY_REF_SPLICE CHKA^ENSG00000110721.12 chr11:68097019:- ZNF343^ENSG00000088876.13 chr20:2493577:- YES_LDAS 0.0034 GT 1.9086 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr20]"] CHCHD6--TXNRD3 1 0 1.00 0.00 ONLY_REF_SPLICE CHCHD6^ENSG00000159685.11 chr3:126733222:+ TXNRD3^ENSG00000197763.20 chr3:126647296:- YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr3:0.05Mb]","LOCAL_INVERSION:+:-:[49116]"] CFAP70--ACKR2 1 0 1.00 0.00 INCL_NON_REF_SPLICE CFAP70^ENSG00000156042.18 chr10:73291226:- ACKR2^ENSG00000144648.16 chr3:42866359:+ YES_LDAS 0.0034 GT 1.8256 AG 1.7819 ["INTERCHROMOSOMAL[chr10--chr3]"] CFAP44--SPICE1 1 0 1.00 0.00 ONLY_REF_SPLICE CFAP44^ENSG00000206530.11 chr3:113380899:- SPICE1^ENSG00000163611.11 chr3:113468404:- YES_LDAS 0.0034 GT 1.8323 AG 1.6402 ["DEEPEST2019","INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[1108]"] CFAP36--ACSM3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CFAP36^ENSG00000163001.12 chr2:55519910:+ ACSM3^ENSG00000005187.12 chr16:20749650:+ NO_LDAS 0.0034 GT 1.8062 AG 1.4295 ["INTERCHROMOSOMAL[chr2--chr16]"] CETN3--DEPDC1B 1 0 1.00 0.00 ONLY_REF_SPLICE CETN3^ENSG00000153140.9 chr5:90399358:- DEPDC1B^ENSG00000035499.13 chr5:60647533:- YES_LDAS 0.0034 GT 1.5219 AG 1.2729 ["INTRACHROMOSOMAL[chr5:29.69Mb]"] CERS5--TRMT12 1 0 1.00 0.00 INCL_NON_REF_SPLICE CERS5^ENSG00000139624.14 chr12:50133212:- TRMT12^ENSG00000183665.5 chr8:124450925:+ YES_LDAS 0.0034 GT 1.9219 AG 1.5219 ["INTERCHROMOSOMAL[chr12--chr8]"] CEP85L--GET1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CEP85L^ENSG00000111860.14 chr6:118464213:- GET1^ENSG00000182093.16 chr21:39390830:+ NO_LDAS 0.0017 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chr6--chr21]"] CEP68--CMTR1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP68^ENSG00000011523.14 chr2:65072521:+ CMTR1^ENSG00000137200.13 chr6:37435713:+ YES_LDAS 0.0034 GT 1.4716 AG 1.9219 ["INTERCHROMOSOMAL[chr2--chr6]"] CEP44--AC025458.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CEP44^ENSG00000164118.13 chr4:174317915:+ AC025458.1^ENSG00000249774.1 chr5:31923466:+ YES_LDAS 0.0034 AT 1.5850 AC 1.8062 ["INTERCHROMOSOMAL[chr4--chr5]"] CEP290--HEATR5A 1 0 1.00 0.00 ONLY_REF_SPLICE CEP290^ENSG00000198707.17 chr12:88120114:- HEATR5A^ENSG00000129493.15 chr14:31296063:- YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr12--chr14]"] CEP135--FZD3 1 0 1.00 0.00 ONLY_REF_SPLICE CEP135^ENSG00000174799.11 chr4:55992085:+ FZD3^ENSG00000104290.11 chr8:28555738:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr8]"] CEP112--TMPO 1 0 1.00 0.00 ONLY_REF_SPLICE CEP112^ENSG00000154240.17 chr17:66175044:- TMPO^ENSG00000120802.14 chr12:98537475:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr12]"] CENPV--PJVK 1 0 1.00 0.00 ONLY_REF_SPLICE CENPV^ENSG00000166582.10 chr17:16349931:- PJVK^ENSG00000204311.15 chr2:178460982:+ YES_LDAS 0.0034 GT 1.8323 AG 1.5219 ["INTERCHROMOSOMAL[chr17--chr2]"] CENPN--GCSH 1 0 1.00 0.00 ONLY_REF_SPLICE CENPN^ENSG00000166451.14 chr16:81007277:+ GCSH^ENSG00000140905.11 chr16:81087664:- YES_LDAS 0.0034 GT 1.7232 AG 1.7465 ["INTRACHROMOSOMAL[chr16:0.05Mb]","LOCAL_INVERSION:+:-:[48831]"] CENPI--MYL6B 1 0 1.00 0.00 ONLY_REF_SPLICE CENPI^ENSG00000102384.13 chrX:101098539:+ MYL6B^ENSG00000196465.10 chr12:56157468:+ YES_LDAS 0.0034 GT 1.3710 AG 1.7056 ["INTERCHROMOSOMAL[chrX--chr12]"] CENATAC--AC142086.6 1 0 0.25 0.00 INCL_NON_REF_SPLICE CENATAC^ENSG00000186166.9 chr11:119011283:+ AC142086.6^ENSG00000277304.1 chr16:32946317:+ NO_LDAS 0.0008 GT 1.9086 AG 1.7968 ["INTERCHROMOSOMAL[chr11--chr16]"] CDK8P1--CDK8 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDK8P1^ENSG00000230044.1 chr2:11665846:- CDK8^ENSG00000132964.12 chr13:26396300:+ NO_LDAS 0.0034 GT 1.3996 AG 1.5546 ["INTERCHROMOSOMAL[chr2--chr13]"] CDK8--IFT88 1 0 1.00 0.00 ONLY_REF_SPLICE CDK8^ENSG00000132964.12 chr13:26353880:+ IFT88^ENSG00000032742.18 chr13:20690705:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr13:5.56Mb]"] CDK7--AC008015.1 1 0 0.25 0.00 INCL_NON_REF_SPLICE CDK7^ENSG00000134058.12 chr5:69235453:+ AC008015.1^ENSG00000258578.2 chr14:76013704:+ NO_LDAS 0.0008 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr14]"] CDK6--POT1 1 0 1.00 0.00 ONLY_REF_SPLICE CDK6^ENSG00000105810.10 chr7:92725626:- POT1^ENSG00000128513.16 chr7:124842963:- YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTRACHROMOSOMAL[chr7:31.99Mb]"] CDIN1--AL669831.4 1 0 0.50 0.00 ONLY_REF_SPLICE CDIN1^ENSG00000186073.14 chr15:36709961:+ AL669831.4^ENSG00000230092.7 chr1:810170:- YES_LDAS 0.0017 GT 1.9086 AG 1.7056 ["INTERCHROMOSOMAL[chr15--chr1]"] CDCA5--DNAJC17 1 0 1.00 0.00 INCL_NON_REF_SPLICE CDCA5^ENSG00000146670.10 chr11:65079382:- DNAJC17^ENSG00000104129.10 chr15:40807455:- YES_LDAS 0.0034 GT 1.4566 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chr15]"] CDC42SE1--TRIM40 1 0 0.50 0.00 INCL_NON_REF_SPLICE CDC42SE1^ENSG00000197622.13 chr1:151055677:- TRIM40^ENSG00000204614.9 chr6:30146063:+ NO_LDAS 0.0017 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr6]"] CDC42SE1--MYH13 1 0 0.50 0.00 INCL_NON_REF_SPLICE CDC42SE1^ENSG00000197622.13 chr1:151055677:- MYH13^ENSG00000006788.14 chr17:10320478:- NO_LDAS 0.0017 GT 1.5656 AG 1.6895 ["INTERCHROMOSOMAL[chr1--chr17]"] CDC25A--DSN1 1 0 1.00 0.00 ONLY_REF_SPLICE CDC25A^ENSG00000164045.12 chr3:48184653:- DSN1^ENSG00000149636.16 chr20:36771473:- YES_LDAS 0.0034 GT 1.4716 AG 1.9899 ["INTERCHROMOSOMAL[chr3--chr20]"] CD99P1--MCPH1 1 0 1.00 0.00 ONLY_REF_SPLICE CD99P1^ENSG00000223773.7 chrX:2626642:+ MCPH1^ENSG00000147316.13 chr8:6455143:+ YES_LDAS 0.0034 GT 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chrY--chr8]"] CD99L2--FAM122C 1 0 1.00 0.00 ONLY_REF_SPLICE CD99L2^ENSG00000102181.21 chrX:150898522:- FAM122C^ENSG00000156500.15 chrX:134829226:+ YES_LDAS 0.0034 GT 1.8323 AG 1.7056 ["INTRACHROMOSOMAL[chrX:15.91Mb]"] CD83--AL009177.1 1 0 1.00 0.00 ONLY_REF_SPLICE CD83^ENSG00000112149.10 chr6:14118065:+ AL009177.1^ENSG00000286277.1 chr6:14498057:+ YES_LDAS 0.0034 GT 1.9329 AG 1.8295 ["INTRACHROMOSOMAL[chr6:0.29Mb]"] CCT6P1--AC073210.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCT6P1^ENSG00000228409.6 chr7:65763344:+ AC073210.1^ENSG00000227113.2 chr7:65078624:+ YES_LDAS 0.0034 GT 1.9086 AG 1.8323 ["INTRACHROMOSOMAL[chr7:0.67Mb]"] CCSER1--TEX35 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCSER1^ENSG00000184305.15 chr4:90309377:+ TEX35^ENSG00000240021.10 chr1:178521683:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr4--chr1]"] CCP110--ERI2 1 0 1.00 0.00 ONLY_REF_SPLICE CCP110^ENSG00000103540.16 chr16:19532544:+ ERI2^ENSG00000196678.14 chr16:20789557:- YES_LDAS 0.0034 GT 1.9656 AG 1.9899 ["INTRACHROMOSOMAL[chr16:1.23Mb]"] CCNYL4--ZNF37A 1 0 1.00 0.00 ONLY_REF_SPLICE CCNYL4^ENSG00000224761.4 chr10:38177975:+ ZNF37A^ENSG00000075407.18 chr10:38114755:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:+:[14355]"] CCNJL--TTC1 1 0 1.00 0.00 ONLY_REF_SPLICE CCNJL^ENSG00000135083.16 chr5:160311858:- TTC1^ENSG00000113312.11 chr5:160035140:+ YES_LDAS 0.0034 GT 1.8256 AG 0.9183 ["INTRACHROMOSOMAL[chr5:0.18Mb]"] CCNDBP1--ZNF780A 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCNDBP1^ENSG00000166946.14 chr15:43188626:+ ZNF780A^ENSG00000197782.14 chr19:40083237:- YES_LDAS 0.0017 GT 1.9329 AG 1.9899 ["INTERCHROMOSOMAL[chr15--chr19]"] CCDC62--AL035458.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CCDC62^ENSG00000130783.14 chr12:122792121:+ AL035458.1^ENSG00000236456.1 chr20:34246332:- YES_LDAS 0.0017 GT 1.7232 AG 1.3996 ["INTERCHROMOSOMAL[chr12--chr20]"] CCDC24--MFSD13A 1 0 0.33 0.00 INCL_NON_REF_SPLICE CCDC24^ENSG00000159214.13 chr1:43993906:+ MFSD13A^ENSG00000138111.14 chr10:102475782:+ NO_LDAS 0.0011 GC 1.9656 AG 1.6729 ["INTERCHROMOSOMAL[chr1--chr10]"] CCDC198--NPIPB10P 1 0 0.06 0.00 ONLY_REF_SPLICE CCDC198^ENSG00000100557.10 chr14:57475582:- NPIPB10P^ENSG00000196796.5 chr16:29050502:+ YES_LDAS 0.0002 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr14--chr16]"] CCDC18--CENPI 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC18^ENSG00000122483.17 chr1:93264901:+ CENPI^ENSG00000102384.13 chrX:101140666:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8323 ["INTERCHROMOSOMAL[chr1--chrX]"] CCDC151--FAT3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC151^ENSG00000198003.12 chr19:11426873:- FAT3^ENSG00000165323.16 chr11:92799297:+ NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr19--chr11]"] CCDC15--SLC37A2 1 0 1.00 0.00 ONLY_REF_SPLICE CCDC15^ENSG00000149548.15 chr11:125039069:+ SLC37A2^ENSG00000134955.12 chr11:125076757:+ NO_LDAS 0.0034 GT 1.5546 AG 1.9329 ["INTRACHROMOSOMAL[chr11:0.02Mb]","NEIGHBORS[21813]"] CCDC136--COBLL1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CCDC136^ENSG00000128596.17 chr7:128812929:+ COBLL1^ENSG00000082438.18 chr2:164779755:- NO_LDAS 0.0034 GT 1.6402 AG 1.6402 ["INTERCHROMOSOMAL[chr7--chr2]"] CBLN4--AC012676.1 1 0 0.20 0.00 INCL_NON_REF_SPLICE CBLN4^ENSG00000054803.4 chr20:56004100:- AC012676.1^ENSG00000262712.1 chr16:4337173:- NO_LDAS 0.0007 GT 1.4295 AG 1.4566 ["INTERCHROMOSOMAL[chr20--chr16]"] CATSPER3--C5orf66 1 0 1.00 0.00 ONLY_REF_SPLICE CATSPER3^ENSG00000152705.8 chr5:135009490:+ C5orf66^ENSG00000224186.8 chr5:135174042:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr5:0.02Mb]","NEIGHBORS[21584]"] CASP8--STRADB 1 0 1.00 0.00 ONLY_REF_SPLICE CASP8^ENSG00000064012.22 chr2:201285317:+ STRADB^ENSG00000082146.13 chr2:201454746:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9086 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr2:0.10Mb]"] CASP6--PPP1R11 1 0 1.00 0.00 INCL_NON_REF_SPLICE CASP6^ENSG00000138794.10 chr4:109694555:- PPP1R11^ENSG00000204619.8 chr6:30067193:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr4--chr6]"] CASP4--TSPAN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CASP4^ENSG00000196954.14 chr11:104951009:- TSPAN3^ENSG00000140391.15 chr15:77052444:- YES_LDAS 0.0034 GC 1.9329 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr15]"] CASC9--AC100782.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE CASC9^ENSG00000249395.4 chr8:75324221:- AC100782.1^ENSG00000254238.1 chr8:75029459:- NO_LDAS 0.0034 GT 1.7819 AG 1.8062 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[90949]"] CAPZA2--ARMC1 1 0 1.00 0.00 ONLY_REF_SPLICE CAPZA2^ENSG00000198898.14 chr7:116862650:+ ARMC1^ENSG00000104442.10 chr8:65627433:- YES_LDAS 0.0034 GT 1.7819 AG 1.2729 ["INTERCHROMOSOMAL[chr7--chr8]"] CAP2--GRIN2A 1 0 0.50 0.00 INCL_NON_REF_SPLICE CAP2^ENSG00000112186.12 chr6:17426694:+ GRIN2A^ENSG00000183454.18 chr16:9755337:- NO_LDAS 0.0017 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr16]"] CAP2--AC132008.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE CAP2^ENSG00000112186.12 chr6:17426694:+ AC132008.2^ENSG00000214135.8 chr3:197593126:- NO_LDAS 0.0017 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr6--chr3]"] CAMLG--GCSH 1 0 1.00 0.00 INCL_NON_REF_SPLICE CAMLG^ENSG00000164615.6 chr5:134744025:+ GCSH^ENSG00000140905.11 chr16:81082762:- YES_LDAS 0.0034 AT 1.9329 AC 1.5329 ["INTERCHROMOSOMAL[chr5--chr16]"] CAMKMT--SLC8A3 1 0 1.00 0.00 INCL_NON_REF_SPLICE CAMKMT^ENSG00000143919.15 chr2:44362145:+ SLC8A3^ENSG00000100678.19 chr14:70167459:- NO_LDAS 0.0034 GT 1.9086 AG 1.7232 ["INTERCHROMOSOMAL[chr2--chr14]"] CACNB2--NEBL 1 0 1.00 0.00 ONLY_REF_SPLICE CACNB2^ENSG00000165995.22 chr10:18150975:+ NEBL^ENSG00000078114.19 chr10:20961779:- YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr10:2.24Mb]"] CABYR--TTC39C 1 0 1.00 0.00 ONLY_REF_SPLICE CABYR^ENSG00000154040.21 chr18:24156042:+ TTC39C^ENSG00000168234.13 chr18:24080585:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9086 ["INTRACHROMOSOMAL[chr18:0.00Mb]","LOCAL_REARRANGEMENT:+:[3377]"] CA13--AC011005.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE CA13^ENSG00000185015.8 chr8:85281639:+ AC011005.1^ENSG00000230626.4 chr7:129126818:+ YES_LDAS 0.0017 GT 1.7968 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr7]"] C8orf88--PIP4P2 1 0 1.00 0.00 ONLY_REF_SPLICE C8orf88^ENSG00000253250.3 chr8:90960742:- PIP4P2^ENSG00000155099.8 chr8:91021404:- YES_LDAS 0.0034 GT 1.7968 AG 1.7232 ["INTRACHROMOSOMAL[chr8:0.01Mb]","LOCAL_REARRANGEMENT:-:[8564]"] C7orf25--VPS41 1 0 1.00 0.00 ONLY_REF_SPLICE C7orf25^ENSG00000136197.13 chr7:42911915:- VPS41^ENSG00000006715.16 chr7:38898129:- YES_LDAS 0.0034 GT 1.5656 AG 1.9899 ["INTRACHROMOSOMAL[chr7:3.98Mb]"] C7orf25--DMGDH 1 0 1.00 0.00 INCL_NON_REF_SPLICE C7orf25^ENSG00000136197.13 chr7:42910813:- DMGDH^ENSG00000132837.15 chr5:79028624:- NO_LDAS 0.0034 GT 1.7232 AG 1.5219 ["INTERCHROMOSOMAL[chr7--chr5]"] C6orf62--MOB3A 1 0 1.00 0.00 ONLY_REF_SPLICE C6orf62^ENSG00000112308.13 chr6:24708777:- MOB3A^ENSG00000172081.14 chr19:2077013:- NO_LDAS 0.0034 GT 1.9329 AG 1.7968 ["INTERCHROMOSOMAL[chr6--chr19]"] C20orf27--RFESD 1 0 0.50 0.00 INCL_NON_REF_SPLICE C20orf27^ENSG00000101220.18 chr20:3754404:- RFESD^ENSG00000175449.14 chr5:95656529:+ NO_LDAS 0.0017 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr20--chr5]"] C1QTNF6--ZFYVE1 1 0 1.00 0.00 INCL_NON_REF_SPLICE C1QTNF6^ENSG00000133466.14 chr22:37182341:- ZFYVE1^ENSG00000165861.14 chr14:73026977:- YES_LDAS 0.0034 AT 1.8256 AC 1.4295 ["INTERCHROMOSOMAL[chr22--chr14]"] C1GALT1--MSRA 1 0 1.00 0.00 ONLY_REF_SPLICE C1GALT1^ENSG00000106392.11 chr7:7182820:+ MSRA^ENSG00000175806.15 chr8:10207833:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7819 ["INTERCHROMOSOMAL[chr7--chr8]"] C16orf87--TENT2 1 0 1.00 0.00 ONLY_REF_SPLICE C16orf87^ENSG00000155330.10 chr16:46831084:- TENT2^ENSG00000164329.13 chr5:79645123:+ NO_LDAS 0.0034 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr5]"] C12orf75--EBLN3P 1 0 1.00 0.00 ONLY_REF_SPLICE C12orf75^ENSG00000235162.9 chr12:105330937:+ EBLN3P^ENSG00000281649.2 chr9:37086668:+ YES_LDAS 0.0034 GT 1.3996 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr9]"] C11orf54--SYVN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE C11orf54^ENSG00000182919.15 chr11:93762514:+ SYVN1^ENSG00000162298.19 chr11:65128359:- YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTRACHROMOSOMAL[chr11:28.61Mb]"] C10orf88--GSDMB 1 0 1.00 0.00 ONLY_REF_SPLICE C10orf88^ENSG00000119965.13 chr10:122954015:- GSDMB^ENSG00000073605.18 chr17:39909924:- NO_LDAS 0.0034 GT 1.7968 AG 1.5628 ["INTERCHROMOSOMAL[chr10--chr17]"] C10orf71--CCDC114 1 0 0.50 0.00 INCL_NON_REF_SPLICE C10orf71^ENSG00000177354.12 chr10:49325741:+ CCDC114^ENSG00000105479.16 chr19:48318554:- NO_LDAS 0.0017 GT 1.5219 AG 1.7232 ["INTERCHROMOSOMAL[chr10--chr19]"] BZW2--CRPPA 1 0 1.00 0.00 ONLY_REF_SPLICE BZW2^ENSG00000136261.15 chr7:16646288:+ CRPPA^ENSG00000214960.11 chr7:16216197:- YES_LDAS 0.0034 GT 1.9219 AG 1.6049 ["INTRACHROMOSOMAL[chr7:0.14Mb]"] BX005040.4--CNTNAP3C 1 0 1.00 0.00 ONLY_REF_SPLICE BX005040.4^ENSG00000283541.1 chr9:61104459:- CNTNAP3C^ENSG00000283378.1 chr9:61447338:+ YES_LDAS 0.0034 GT 1.9219 AG 1.9656 ["INTRACHROMOSOMAL[chr9:0.22Mb]"] BTRC--RAB4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE BTRC^ENSG00000166167.18 chr10:101550822:+ RAB4A^ENSG00000168118.12 chr1:229304442:+ YES_LDAS 0.0034 GT 1.6402 AG 1.8323 ["INTERCHROMOSOMAL[chr10--chr1]"] BTBD8--TBK1 1 0 1.00 0.00 ONLY_REF_SPLICE BTBD8^ENSG00000189195.15 chr1:92171460:+ TBK1^ENSG00000183735.11 chr12:64480012:+ NO_LDAS 0.0034 GT 1.9899 AG 1.5329 ["INTERCHROMOSOMAL[chr1--chr12]"] BRD8--ZCCHC9 1 0 1.00 0.00 INCL_NON_REF_SPLICE BRD8^ENSG00000112983.18 chr5:138164918:- ZCCHC9^ENSG00000131732.12 chr5:81304766:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTRACHROMOSOMAL[chr5:56.83Mb]"] BMS1P2--CDK19 1 0 1.00 0.00 ONLY_REF_SPLICE BMS1P2^ENSG00000251079.6 chr10:47542167:- CDK19^ENSG00000155111.15 chr6:110746201:- NO_LDAS 0.0034 GT 1.7465 AG 1.1589 ["INTERCHROMOSOMAL[chr10--chr6]"] BMPR1A--COX6C 1 0 1.00 0.00 INCL_NON_REF_SPLICE BMPR1A^ENSG00000107779.14 chr10:86921586:+ COX6C^ENSG00000164919.11 chr8:99892008:- NO_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr10--chr8]"] BLOC1S4--TRPC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE BLOC1S4^ENSG00000186222.5 chr4:6716337:+ TRPC3^ENSG00000138741.11 chr4:121951605:- NO_LDAS 0.0034 GT 1.5628 AG 1.3710 ["INTRACHROMOSOMAL[chr4:115.16Mb]"] BLOC1S2--MESD 1 0 1.00 0.00 ONLY_REF_SPLICE BLOC1S2^ENSG00000196072.12 chr10:100286097:- MESD^ENSG00000117899.11 chr15:80952296:- YES_LDAS 0.0034 GT 1.8295 AG 1.7232 ["INTERCHROMOSOMAL[chr10--chr15]"] BLACE--INVS 1 0 1.00 0.00 ONLY_REF_SPLICE BLACE^ENSG00000204960.7 chr7:155363104:- INVS^ENSG00000119509.13 chr9:100226062:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr9]"] BIN3--ST7 1 0 1.00 0.00 INCL_NON_REF_SPLICE BIN3^ENSG00000147439.13 chr8:22624206:- ST7^ENSG00000004866.22 chr7:117209849:+ YES_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr8--chr7]"] BICDL1--AL139246.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE BICDL1^ENSG00000135127.11 chr12:119998736:+ AL139246.3^ENSG00000228037.1 chr1:2584184:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr12--chr1]"] BEX3--Z99755.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BEX3^ENSG00000166681.14 chrX:103377672:+ Z99755.1^ENSG00000238153.1 chr22:35165208:+ YES_LDAS 0.0034 GT 1.8062 AG 1.5301 ["INTERCHROMOSOMAL[chrX--chr22]"] BDNF--GRIK4 1 0 0.50 0.00 INCL_NON_REF_SPLICE BDNF^ENSG00000176697.20 chr11:27658505:- GRIK4^ENSG00000149403.13 chr11:120956793:+ NO_LDAS 0.0017 AT 1.8892 AC 1.9329 ["INTRACHROMOSOMAL[chr11:92.79Mb]"] BDH1--FECH 1 0 1.00 0.00 ONLY_REF_SPLICE BDH1^ENSG00000161267.12 chr3:197522640:- FECH^ENSG00000066926.12 chr18:57573365:- YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr3--chr18]"] BCL7C--AC073046.1 1 0 1.00 0.00 ONLY_REF_SPLICE BCL7C^ENSG00000099385.12 chr16:30888860:- AC073046.1^ENSG00000235499.1 chr2:73985980:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr2]"] BCKDHB--AL359715.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.4^ENSG00000279022.1 chr6:80440828:+ YES_LDAS 0.0034 GT 1.9899 AG 1.7819 ["INTRACHROMOSOMAL[chr6:0.09Mb]","NEIGHBORS[94460]"] BCKDHB--AL359715.1 1 0 1.00 0.00 ONLY_REF_SPLICE BCKDHB^ENSG00000083123.15 chr6:80273221:+ AL359715.1^ENSG00000233967.7 chr6:80462872:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8256 ["INTRACHROMOSOMAL[chr6:0.10Mb]","NEIGHBORS[95025]"] BBS9--DTX2 1 0 1.00 0.00 ONLY_REF_SPLICE BBS9^ENSG00000122507.21 chr7:33534176:+ DTX2^ENSG00000091073.19 chr7:76463545:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8323 ["INTRACHROMOSOMAL[chr7:42.58Mb]"] BBS4--AC098969.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BBS4^ENSG00000140463.14 chr15:72735193:+ AC098969.1^ENSG00000285738.1 chr3:66794087:+ NO_LDAS 0.0034 GT 1.8323 AG 1.5546 ["INTERCHROMOSOMAL[chr15--chr3]"] BBS10--AC078820.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BBS10^ENSG00000179941.9 chr12:76332804:- AC078820.1^ENSG00000258088.1 chr12:75694975:- NO_LDAS 0.0034 GT 1.8892 AG 1.5546 ["INTRACHROMOSOMAL[chr12:0.65Mb]"] BBS10--AC078820.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE BBS10^ENSG00000179941.9 chr12:76332804:- AC078820.1^ENSG00000258088.1 chr12:75694947:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr12:0.65Mb]"] BAZ1A--MRPS7 1 0 1.00 0.00 ONLY_REF_SPLICE BAZ1A^ENSG00000198604.11 chr14:34874492:- MRPS7^ENSG00000125445.11 chr17:75262497:+ YES_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr17]"] BARD1--AC068051.1 1 0 1.00 0.00 ONLY_REF_SPLICE BARD1^ENSG00000138376.11 chr2:214809412:- AC068051.1^ENSG00000197585.10 chr2:214436317:- NO_LDAS 0.0034 GT 1.5656 AG 1.9219 ["INTRACHROMOSOMAL[chr2:0.04Mb]","NEIGHBORS[41400]"] BACH2--ANKRD6 1 0 1.00 0.00 ONLY_REF_SPLICE BACH2^ENSG00000112182.15 chr6:90206569:- ANKRD6^ENSG00000135299.17 chr6:89595916:+ NO_LDAS 0.0034 GT 1.8892 AG 1.7968 ["INTRACHROMOSOMAL[chr6:0.29Mb]"] BACE2--HMGXB4 1 0 1.00 0.00 ONLY_REF_SPLICE BACE2^ENSG00000182240.16 chr21:41246063:+ HMGXB4^ENSG00000100281.14 chr22:35262323:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTERCHROMOSOMAL[chr21--chr22]"] BABAM2--WARS2-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE BABAM2^ENSG00000158019.21 chr2:27988087:+ WARS2-AS1^ENSG00000231365.6 chr1:119150793:+ NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr1]"] BABAM1--PI4KB 1 0 1.00 0.00 ONLY_REF_SPLICE BABAM1^ENSG00000105393.16 chr19:17267527:+ PI4KB^ENSG00000143393.16 chr1:151307801:- YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr1]"] BAALC-AS1--CHCHD7 1 0 1.00 0.00 ONLY_REF_SPLICE BAALC-AS1^ENSG00000247081.8 chr8:103246294:- CHCHD7^ENSG00000170791.18 chr8:56217331:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr8:46.93Mb]"] B4GALNT1--PROC 1 0 1.00 0.00 INCL_NON_REF_SPLICE B4GALNT1^ENSG00000135454.14 chr12:57626250:- PROC^ENSG00000115718.18 chr2:127428766:+ NO_LDAS 0.0034 GT 1.5546 AG 1.6729 ["INTERCHROMOSOMAL[chr12--chr2]"] AXDND1--SOAT1 1 0 1.00 0.00 ONLY_REF_SPLICE AXDND1^ENSG00000162779.22 chr1:179370078:+ SOAT1^ENSG00000057252.13 chr1:179337837:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9656 ["INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:+:[7040]"] AUP1--LINC02667 1 0 1.00 0.00 INCL_NON_REF_SPLICE AUP1^ENSG00000115307.17 chr2:74527940:- LINC02667^ENSG00000224190.2 chr10:128915668:+ NO_LDAS 0.0034 GT 1.9656 AG 1.3996 ["INTERCHROMOSOMAL[chr2--chr10]"] ATPSCKMT--KYNU 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATPSCKMT^ENSG00000150756.14 chr5:10227281:- KYNU^ENSG00000115919.15 chr2:143053226:+ NO_LDAS 0.0034 GT 1.2419 AG 1.8892 ["INTERCHROMOSOMAL[chr5--chr2]"] ATP6V0A1--JAK3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP6V0A1^ENSG00000033627.17 chr17:42494473:+ JAK3^ENSG00000105639.20 chr19:17844403:- NO_LDAS 0.0034 GT 1.3996 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr19]"] ATP5PB--GPD2 1 0 1.00 0.00 ONLY_REF_SPLICE ATP5PB^ENSG00000116459.11 chr1:111449873:+ GPD2^ENSG00000115159.16 chr2:156476098:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] ATP5PB--ATP5PBP2 1 0 0.50 0.00 INCL_NON_REF_SPLICE ATP5PB^ENSG00000116459.11 chr1:111456249:+ ATP5PBP2^ENSG00000214342.2 chr7:94739032:+ NO_LDAS 0.0017 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr1--chr7]"] ATP5MD--RNF7 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATP5MD^ENSG00000173915.16 chr10:103392191:- RNF7^ENSG00000114125.14 chr3:141747123:+ YES_LDAS 0.0034 GT 1.6049 AG 1.6402 ["INTERCHROMOSOMAL[chr10--chr3]"] ATP5MC1--VPS54 1 0 1.00 0.00 ONLY_REF_SPLICE ATP5MC1^ENSG00000159199.14 chr17:48895334:+ VPS54^ENSG00000143952.20 chr2:63914287:- YES_LDAS 0.0034 GT 1.9899 AG 1.9219 ["INTERCHROMOSOMAL[chr17--chr2]"] ATP5F1C--PLEKHA1 1 0 1.00 0.00 ONLY_REF_SPLICE ATP5F1C^ENSG00000165629.20 chr10:7796155:+ PLEKHA1^ENSG00000107679.14 chr10:122406576:+ NO_LDAS 0.0034 GT 1.7968 AG 1.8062 ["INTRACHROMOSOMAL[chr10:114.57Mb]"] ATP5F1C--DAD1 1 0 0.50 0.00 INCL_NON_REF_SPLICE ATP5F1C^ENSG00000165629.20 chr10:7799181:+ DAD1^ENSG00000129562.11 chr14:22589034:- YES_LDAS 0.0017 GC 1.7968 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr14]"] ATP11C--MTMR1 1 0 1.00 0.00 ONLY_REF_SPLICE ATP11C^ENSG00000101974.14 chrX:139782547:- MTMR1^ENSG00000063601.17 chrX:150699195:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTRACHROMOSOMAL[chrX:10.75Mb]"] ATG5--STX7 1 0 1.00 0.00 ONLY_REF_SPLICE ATG5^ENSG00000057663.16 chr6:106316101:- STX7^ENSG00000079950.14 chr6:132503588:- YES_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr6:26.12Mb]"] ATG4C--APIP 1 0 1.00 0.00 ONLY_REF_SPLICE ATG4C^ENSG00000125703.15 chr1:62805255:+ APIP^ENSG00000149089.13 chr11:34895110:- YES_LDAS 0.0034 GT 1.4295 AG 1.8062 ["INTERCHROMOSOMAL[chr1--chr11]"] ATF3--ST7L 1 0 1.00 0.00 ONLY_REF_SPLICE ATF3^ENSG00000162772.17 chr1:212615261:+ ST7L^ENSG00000007341.19 chr1:112611003:- YES_LDAS 0.0034 GT 1.7465 AG 1.5656 ["INTRACHROMOSOMAL[chr1:99.94Mb]"] ATF2--SETBP1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ATF2^ENSG00000115966.17 chr2:175097444:- SETBP1^ENSG00000152217.20 chr18:44952879:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr2--chr18]"] ATE1-AS1--RBP7 1 0 1.00 0.00 ONLY_REF_SPLICE ATE1-AS1^ENSG00000226864.2 chr10:121928634:+ RBP7^ENSG00000162444.12 chr1:10015782:+ YES_LDAS 0.0034 GT 1.8892 AG 1.8256 ["INTERCHROMOSOMAL[chr10--chr1]"] ASS1P5--GSTO1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASS1P5^ENSG00000227881.1 chrX:115665106:+ GSTO1^ENSG00000148834.13 chr10:104255163:+ NO_LDAS 0.0034 GT 1.5301 AG 1.4295 ["INTERCHROMOSOMAL[chrX--chr10]"] ASNSD1--ANKAR 1 0 1.00 0.00 ONLY_REF_SPLICE ASNSD1^ENSG00000138381.10 chr2:189667945:+ ANKAR^ENSG00000151687.14 chr2:189689527:+ YES_LDAS 0.0034 GT 1.5329 AG 1.7465 ["INTRACHROMOSOMAL[chr2:0.00Mb]","NEIGHBORS[3459]"] ASH2L--RPS3AP26 1 0 0.33 0.00 INCL_NON_REF_SPLICE ASH2L^ENSG00000129691.16 chr8:38128824:+ RPS3AP26^ENSG00000214389.2 chr7:98386527:- NO_LDAS 0.0011 GT 1.3710 AG 1.9329 ["INTERCHROMOSOMAL[chr8--chr7]"] ASH1L-AS1--HSD17B14 1 0 1.00 0.00 INCL_NON_REF_SPLICE ASH1L-AS1^ENSG00000235919.4 chr1:155563329:+ HSD17B14^ENSG00000087076.9 chr19:48815141:- YES_LDAS 0.0034 GT 1.9219 AG 1.3753 ["INTERCHROMOSOMAL[chr1--chr19]"] ASB7--NAA35 1 0 1.00 0.00 ONLY_REF_SPLICE ASB7^ENSG00000183475.13 chr15:100630042:+ NAA35^ENSG00000135040.16 chr9:85974967:+ YES_LDAS 0.0034 GT 1.7232 AG 1.9086 ["INTERCHROMOSOMAL[chr15--chr9]"] ASB7--ACVR1C 1 0 1.00 0.00 ONLY_REF_SPLICE ASB7^ENSG00000183475.13 chr15:100612427:+ ACVR1C^ENSG00000123612.16 chr2:157587417:- YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr15--chr2]"] ARTN--NHLH1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARTN^ENSG00000117407.17 chr1:43935716:+ NHLH1^ENSG00000171786.6 chr1:160372703:+ NO_LDAS 0.0034 GT 1.8892 AG 1.6729 ["INTRACHROMOSOMAL[chr1:116.43Mb]"] ARSJ--AC092567.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARSJ^ENSG00000180801.14 chr4:113978980:- AC092567.1^ENSG00000226605.1 chr2:62826072:- NO_LDAS 0.0034 GT 1.7819 AG 1.2419 ["INTERCHROMOSOMAL[chr4--chr2]"] ARSG--UVRAG 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARSG^ENSG00000141337.13 chr17:68401450:+ UVRAG^ENSG00000198382.9 chr11:75979911:+ NO_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr11]"] ARPC5L--YY1AP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARPC5L^ENSG00000136950.13 chr9:124864107:+ YY1AP1^ENSG00000163374.20 chr1:155675096:- YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTERCHROMOSOMAL[chr9--chr1]"] ARMH3--FLCN 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARMH3^ENSG00000120029.13 chr10:101956597:- FLCN^ENSG00000154803.13 chr17:17212617:- YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr10--chr17]"] ARMH3--CBWD2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARMH3^ENSG00000120029.13 chr10:101889733:- CBWD2^ENSG00000136682.15 chr2:113460680:+ NO_LDAS 0.0034 GT 1.6402 AG 1.7465 ["INTERCHROMOSOMAL[chr10--chr2]"] ARMC4--SLC12A1 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC4^ENSG00000169126.16 chr10:27907663:- SLC12A1^ENSG00000074803.20 chr15:48217832:+ NO_LDAS 0.0034 GT 1.6049 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr15]"] ARMC4--DPM1 1 0 1.00 0.00 ONLY_REF_SPLICE ARMC4^ENSG00000169126.16 chr10:27853242:- DPM1^ENSG00000000419.13 chr20:50948662:- NO_LDAS 0.0034 GC 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr10--chr20]"] ARL8B--MTMR14 1 0 1.00 0.00 ONLY_REF_SPLICE ARL8B^ENSG00000134108.14 chr3:5122588:+ MTMR14^ENSG00000163719.20 chr3:9653621:+ YES_LDAS 0.0034 GT 1.9899 AG 1.8892 ["INTRACHROMOSOMAL[chr3:4.47Mb]"] ARL3--EIF4E2 1 0 1.00 0.00 ONLY_REF_SPLICE ARL3^ENSG00000138175.9 chr10:102685816:- EIF4E2^ENSG00000135930.14 chr2:232564247:+ YES_LDAS 0.0034 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr2]"] ARL2--AP005264.4 1 0 0.50 0.00 INCL_NON_REF_SPLICE ARL2^ENSG00000213465.8 chr11:65021742:+ AP005264.4^ENSG00000267733.5 chr18:12222889:+ NO_LDAS 0.0017 GC 1.9219 AG 1.6895 ["INTERCHROMOSOMAL[chr11--chr18]"] ARL17A--RPS6KC1 1 0 0.50 0.00 ONLY_REF_SPLICE ARL17A^ENSG00000185829.18 chr17:46570759:- RPS6KC1^ENSG00000136643.12 chr1:213242569:+ YES_LDAS 0.0017 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr1]"] ARL13B--SRFBP1 1 0 1.00 0.00 ONLY_REF_SPLICE ARL13B^ENSG00000169379.17 chr3:94003908:+ SRFBP1^ENSG00000151304.6 chr5:122019260:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr5]"] ARL1--CEBPA 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARL1^ENSG00000120805.14 chr12:101402865:- CEBPA^ENSG00000245848.3 chr19:33302352:- NO_LDAS 0.0034 GT 1.8295 AG 1.0530 ["INTERCHROMOSOMAL[chr12--chr19]"] ARID5A--SEMA4C 1 0 1.00 0.00 ONLY_REF_SPLICE ARID5A^ENSG00000196843.17 chr2:96536830:+ SEMA4C^ENSG00000168758.11 chr2:96865929:- YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTRACHROMOSOMAL[chr2:0.31Mb]"] ARID3C--DCTN3 1 0 1.00 0.00 ONLY_REF_SPLICE ARID3C^ENSG00000205143.3 chr9:34627697:- DCTN3^ENSG00000137100.16 chr9:34618760:- YES_LDAS 0.0034 GT 1.8295 AG 1.7465 ["Babiceanu_Normal","INTRACHROMOSOMAL[chr9:0.00Mb]","NEIGHBORS[856]"] ARHGEF35-AS1--ARHGEF5 1 0 0.25 0.00 ONLY_REF_SPLICE ARHGEF35-AS1^ENSG00000244198.7 chr7:144239388:+ ARHGEF5^ENSG00000050327.15 chr7:144362658:+ YES_LDAS 0.0008 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr7:0.07Mb]","NEIGHBORS[74741]"] ARHGAP42--AC073869.1 1 0 0.33 0.00 ONLY_REF_SPLICE ARHGAP42^ENSG00000165895.19 chr11:100687832:+ AC073869.1^ENSG00000273073.1 chr2:131462125:- YES_LDAS 0.0011 GT 1.6402 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr2]"] ARHGAP19--SLIT1 1 0 1.00 0.00 ONLY_REF_SPLICE ARHGAP19^ENSG00000213390.11 chr10:97229147:- SLIT1^ENSG00000187122.17 chr10:97164890:- NO_LDAS 0.0034 GT 0.9710 AG 1.8892 ["ConjoinG","Greger_Normal","INTRACHROMOSOMAL[chr10:0.04Mb]","NEIGHBORS[36214]"] ARG1--AL163540.1 1 0 0.07 0.00 ONLY_REF_SPLICE ARG1^ENSG00000118520.15 chr6:131547198:+ AL163540.1^ENSG00000204790.9 chr9:63986283:- YES_LDAS 0.0002 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr9]"] ARAF--AC019193.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ARAF^ENSG00000078061.14 chrX:47563329:+ AC019193.4^ENSG00000286821.1 chr4:183020393:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9219 ["INTERCHROMOSOMAL[chrX--chr4]"] ARAF--ABITRAM 1 0 1.00 0.00 ONLY_REF_SPLICE ARAF^ENSG00000078061.14 chrX:47563329:+ ABITRAM^ENSG00000119328.12 chr9:108936308:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chrX--chr9]"] APIP--DNAAF4 1 0 1.00 0.00 ONLY_REF_SPLICE APIP^ENSG00000149089.13 chr11:34916228:- DNAAF4^ENSG00000256061.7 chr15:55467161:- NO_LDAS 0.0034 GT 1.7465 AG 1.3996 ["INTERCHROMOSOMAL[chr11--chr15]"] APIP--DEPDC7 1 0 1.00 0.00 ONLY_REF_SPLICE APIP^ENSG00000149089.13 chr11:34916228:- DEPDC7^ENSG00000121690.11 chr11:33025659:+ YES_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTRACHROMOSOMAL[chr11:1.82Mb]"] APIP--CAT 1 0 1.00 0.00 ONLY_REF_SPLICE APIP^ENSG00000149089.13 chr11:34916228:- CAT^ENSG00000121691.7 chr11:34449192:+ YES_LDAS 0.0034 GT 1.7465 AG 1.9899 ["INTRACHROMOSOMAL[chr11:0.38Mb]"] AP4B1--DNTTIP2 1 0 1.00 0.00 ONLY_REF_SPLICE AP4B1^ENSG00000134262.13 chr1:113904605:- DNTTIP2^ENSG00000067334.14 chr1:93873214:- YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr1:20.01Mb]"] AP006621.1--AC112504.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP006621.1^ENSG00000255108.1 chr11:824521:- AC112504.1^ENSG00000279147.1 chr3:141937814:- NO_LDAS 0.0034 GC 1.7465 AG 1.7232 ["INTERCHROMOSOMAL[chr11--chr3]"] AP003778.1--MEIS2 1 0 1.00 0.00 ONLY_REF_SPLICE AP003778.1^ENSG00000287264.1 chr11:59545975:+ MEIS2^ENSG00000134138.20 chr15:36950400:- YES_LDAS 0.0034 GT 1.3996 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr15]"] AP003108.2--PPP1R32 1 0 1.00 0.00 ONLY_REF_SPLICE AP003108.2^ENSG00000256591.5 chr11:61438113:+ PPP1R32^ENSG00000162148.11 chr11:61484688:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[12404]"] AP003108.2--PPP1R32 1 0 1.00 0.00 ONLY_REF_SPLICE AP003108.2^ENSG00000256591.5 chr11:61438113:+ PPP1R32^ENSG00000162148.11 chr11:61481782:+ NO_LDAS 0.0034 GT 1.9329 AG 1.3996 ["INTRACHROMOSOMAL[chr11:0.01Mb]","NEIGHBORS[12404]"] AP002985.1--USP35 1 0 1.00 0.00 ONLY_REF_SPLICE AP002985.1^ENSG00000288538.1 chr11:78224729:+ USP35^ENSG00000118369.13 chr11:78213646:+ YES_LDAS 0.0034 GT 1.8892 AG 1.2729 ["INTRACHROMOSOMAL[chr11:0.01Mb]","LOCAL_REARRANGEMENT:+:[8583]"] AP002812.5--GNB5 1 0 0.33 0.00 INCL_NON_REF_SPLICE AP002812.5^ENSG00000255449.1 chr11:77869695:- GNB5^ENSG00000069966.19 chr15:52117054:- NO_LDAS 0.0011 GT 1.5329 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr15]"] AP001977.1--PACSIN3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001977.1^ENSG00000286044.1 chr11:121928207:+ PACSIN3^ENSG00000165912.16 chr11:47182764:- YES_LDAS 0.0034 GT 1.9329 AG 1.4716 ["INTRACHROMOSOMAL[chr11:74.49Mb]"] AP001924.1--ZNF407 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001924.1^ENSG00000286023.1 chr11:121979703:- ZNF407^ENSG00000215421.9 chr18:74781428:+ YES_LDAS 0.0034 GT 1.7968 AG 1.6402 ["INTERCHROMOSOMAL[chr11--chr18]"] AP001924.1--UVRAG 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001924.1^ENSG00000286023.1 chr11:121979703:- UVRAG^ENSG00000198382.9 chr11:76065710:+ YES_LDAS 0.0034 GT 1.7968 AG 1.8323 ["INTRACHROMOSOMAL[chr11:45.84Mb]"] AP001924.1--GKAP1 1 0 1.00 0.00 ONLY_REF_SPLICE AP001924.1^ENSG00000286023.1 chr11:122025864:- GKAP1^ENSG00000165113.13 chr9:83753359:- YES_LDAS 0.0034 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr11--chr9]"] AP001453.2--MIS12 1 0 1.00 0.00 ONLY_REF_SPLICE AP001453.2^ENSG00000257086.1 chr11:64248050:- MIS12^ENSG00000167842.16 chr17:5488823:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9219 ["INTERCHROMOSOMAL[chr11--chr17]"] AP001453.1--BAD 1 0 1.00 0.00 ONLY_REF_SPLICE AP001453.1^ENSG00000256116.1 chr11:64234194:- BAD^ENSG00000002330.14 chr11:64271803:- YES_LDAS 0.0034 GT 1.7465 AG 1.3710 ["INTRACHROMOSOMAL[chr11:0.04Mb]","LOCAL_REARRANGEMENT:-:[35478]"] AP001122.1--AC097500.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001122.1^ENSG00000245008.4 chr11:128651857:- AC097500.1^ENSG00000287129.1 chr2:185952902:- YES_LDAS 0.0034 GT 1.9899 AG 1.7465 ["INTERCHROMOSOMAL[chr11--chr2]"] AP001029.2--PRELID3A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AP001029.2^ENSG00000267199.1 chr18:12447619:+ PRELID3A^ENSG00000141391.14 chr18:12421540:+ NO_LDAS 0.0034 GT 1.8256 AG 1.9329 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr18:0.01Mb]","LOCAL_REARRANGEMENT:+:[6652]"] AP000487.1--IMMP2L 1 0 1.00 0.00 ONLY_REF_SPLICE AP000487.1^ENSG00000246889.2 chr11:70398098:- IMMP2L^ENSG00000184903.10 chr7:111561923:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr11--chr7]"] AOPEP--CYP27A1 1 0 1.00 0.00 ONLY_REF_SPLICE AOPEP^ENSG00000148120.17 chr9:95005616:+ CYP27A1^ENSG00000135929.9 chr2:218809577:+ YES_LDAS 0.0034 GT 1.5656 AG 1.9899 ["INTERCHROMOSOMAL[chr9--chr2]"] ANXA6--FAM210B 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANXA6^ENSG00000197043.14 chr5:151117764:- FAM210B^ENSG00000124098.10 chr20:56358976:+ YES_LDAS 0.0034 GC 1.6895 AG 1.3996 ["INTERCHROMOSOMAL[chr5--chr20]"] ANKS3--ZNF500 1 0 1.00 0.00 ONLY_REF_SPLICE ANKS3^ENSG00000168096.15 chr16:4729980:- ZNF500^ENSG00000103199.14 chr16:4762756:- NO_LDAS 0.0034 GT 1.7232 AG 1.9329 ["TumorFusionsNAR2018","INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:-:[13861]"] ANKRD42--CCDC90B 1 0 1.00 0.00 ONLY_REF_SPLICE ANKRD42^ENSG00000137494.14 chr11:83211430:+ CCDC90B^ENSG00000137500.9 chr11:83278829:- YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr11:0.00Mb]","NEIGHBORS_OVERLAP:+:-:[1597]"] ANKRD13C--FAM106A 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKRD13C^ENSG00000118454.13 chr1:70336058:- FAM106A^ENSG00000273018.7 chr17:18524921:- NO_LDAS 0.0034 GT 1.5301 AG 1.9899 ["INTERCHROMOSOMAL[chr1--chr17]"] ANKDD1B--POLK 1 0 1.00 0.00 ONLY_REF_SPLICE ANKDD1B^ENSG00000189045.15 chr5:75625955:+ POLK^ENSG00000122008.15 chr5:75593878:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9899 ["INTRACHROMOSOMAL[chr5:0.01Mb]","LOCAL_REARRANGEMENT:+:[10038]"] ANKDD1A--PLEKHO2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKDD1A^ENSG00000166839.17 chr15:64934234:+ PLEKHO2^ENSG00000241839.10 chr15:64826338:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["TumorFusionsNAR2018","TCGA_StarF2019","INTRACHROMOSOMAL[chr15:0.04Mb]","LOCAL_REARRANGEMENT:+:[43900]"] ANKDD1A--LRP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKDD1A^ENSG00000166839.17 chr15:64943582:+ LRP4^ENSG00000134569.10 chr11:46889536:- NO_LDAS 0.0034 GT 1.7968 AG 1.8062 ["INTERCHROMOSOMAL[chr15--chr11]"] ANKAR--ASNSD1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ANKAR^ENSG00000151687.14 chr2:189738682:+ ASNSD1^ENSG00000138381.10 chr2:189667169:+ YES_LDAS 0.0034 GT 1.9219 AG 1.8892 ["INTRACHROMOSOMAL[chr2:0.00Mb]","LOCAL_REARRANGEMENT:+:[3459]"] AMOT--EDC3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AMOT^ENSG00000126016.16 chrX:112805080:- EDC3^ENSG00000179151.13 chr15:74630897:- NO_LDAS 0.0034 GC 1.5546 AG 1.7968 ["INTERCHROMOSOMAL[chrX--chr15]"] AMMECR1--TMEM164 1 0 1.00 0.00 ONLY_REF_SPLICE AMMECR1^ENSG00000101935.11 chrX:110264489:- TMEM164^ENSG00000157600.12 chrX:110171420:+ YES_LDAS 0.0034 GT 1.9086 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.01Mb]","LOCAL_INVERSION:-:+:[11452]"] AMDHD2--NECAB3 1 0 1.00 0.00 ONLY_REF_SPLICE AMDHD2^ENSG00000162066.16 chr16:2521123:+ NECAB3^ENSG00000125967.17 chr20:33660395:- YES_LDAS 0.0034 GT 1.9329 AG 1.7465 ["INTERCHROMOSOMAL[chr16--chr20]"] ALPK1--HIBCH 1 0 1.00 0.00 ONLY_REF_SPLICE ALPK1^ENSG00000073331.18 chr4:112441105:+ HIBCH^ENSG00000198130.16 chr2:190204802:- NO_LDAS 0.0034 GT 1.8295 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr2]"] ALOX5--CFLAR-AS1 1 0 1.00 0.00 ONLY_REF_SPLICE ALOX5^ENSG00000012779.11 chr10:45428764:+ CFLAR-AS1^ENSG00000226312.7 chr2:201151259:- YES_LDAS 0.0034 GT 1.8295 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr2]"] ALG6--AL162511.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALG6^ENSG00000088035.18 chr1:63414146:+ AL162511.1^ENSG00000258844.2 chr14:36214300:+ NO_LDAS 0.0034 GT 1.7968 AG 0.6998 ["INTERCHROMOSOMAL[chr1--chr14]"] ALG3--GOLGA8M 1 0 0.50 0.00 ONLY_REF_SPLICE ALG3^ENSG00000214160.10 chr3:184244601:- GOLGA8M^ENSG00000188626.6 chr15:28703917:- YES_LDAS 0.0017 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr3--chr15]"] ALDH9A1--RO60 1 0 1.00 0.00 ONLY_REF_SPLICE ALDH9A1^ENSG00000143149.12 chr1:165695252:- RO60^ENSG00000116747.13 chr1:193075820:+ NO_LDAS 0.0034 GT 1.8323 AG 1.9329 ["INTRACHROMOSOMAL[chr1:27.36Mb]"] ALDH2--ANK2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ALDH2^ENSG00000111275.13 chr12:111782022:+ ANK2^ENSG00000145362.20 chr4:113258267:+ YES_LDAS 0.0034 GT 1.6895 AG 1.7465 ["INTERCHROMOSOMAL[chr12--chr4]"] AL596202.1--SDE2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL596202.1^ENSG00000235381.1 chr6:155254285:- SDE2^ENSG00000143751.10 chr1:225991254:- NO_LDAS 0.0034 GT 1.9329 AG 1.9086 ["INTERCHROMOSOMAL[chr6--chr1]"] AL590714.1--SNHG9 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL590714.1^ENSG00000224985.1 chr1:161153898:- SNHG9^ENSG00000255198.4 chr16:1965406:+ NO_LDAS 0.0034 GT 1.8323 AG 1.8295 ["INTERCHROMOSOMAL[chr1--chr16]"] AL590666.4--RRNAD1 1 0 1.00 0.00 ONLY_REF_SPLICE AL590666.4^ENSG00000285570.1 chr1:156689824:+ RRNAD1^ENSG00000143303.12 chr1:156731991:+ YES_LDAS 0.0034 GT 1.9899 AG 1.9086 ["INTRACHROMOSOMAL[chr1:0.02Mb]","NEIGHBORS[23685]"] AL590635.1--RABGAP1L 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL590635.1^ENSG00000219867.1 chr6:91816008:- RABGAP1L^ENSG00000152061.23 chr1:174250475:+ NO_LDAS 0.0034 GT 1.5628 AG 1.8256 ["INTERCHROMOSOMAL[chr6--chr1]"] AL450322.2--WDR62 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL450322.2^ENSG00000229672.3 chr10:3763430:+ WDR62^ENSG00000075702.19 chr19:36103003:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9899 ["INTERCHROMOSOMAL[chr10--chr19]"] AL391058.1--AC117481.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL391058.1^ENSG00000232499.2 chr1:113449897:+ AC117481.1^ENSG00000287398.1 chr3:75214533:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9086 ["INTERCHROMOSOMAL[chr1--chr3]"] AL359715.1--BCKDHB 1 0 1.00 0.00 ONLY_REF_SPLICE AL359715.1^ENSG00000233967.7 chr6:80454227:+ BCKDHB^ENSG00000083123.15 chr6:80343664:+ YES_LDAS 0.0034 GT 1.7819 AG 1.7819 ["INTRACHROMOSOMAL[chr6:0.10Mb]","LOCAL_REARRANGEMENT:+:[95025]"] AL358113.1--ZNF702P 1 0 1.00 0.00 ONLY_REF_SPLICE AL358113.1^ENSG00000285130.2 chr9:69100061:+ ZNF702P^ENSG00000242779.7 chr19:52970842:- YES_LDAS 0.0034 GT 1.8892 AG 1.5656 ["INTERCHROMOSOMAL[chr9--chr19]"] AL356534.1--RBM6 1 0 1.00 0.00 ONLY_REF_SPLICE AL356534.1^ENSG00000286215.1 chr6:126819392:- RBM6^ENSG00000004534.15 chr3:50048245:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr6--chr3]"] AL356157.3--SLC35A5 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL356157.3^ENSG00000287173.1 chr10:44510360:+ SLC35A5^ENSG00000138459.9 chr3:112573889:+ NO_LDAS 0.0034 GT 1.8256 AG 1.9329 ["INTERCHROMOSOMAL[chr10--chr3]"] AL355379.1--JKAMP 1 0 0.33 0.00 INCL_NON_REF_SPLICE AL355379.1^ENSG00000217786.1 chr6:79326596:- JKAMP^ENSG00000050130.18 chr14:59486731:+ YES_LDAS 0.0011 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr6--chr14]"] AL354919.1--TRIM32 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL354919.1^ENSG00000203620.2 chr1:31842939:- TRIM32^ENSG00000119401.11 chr9:116698533:+ NO_LDAS 0.0034 GT 1.4295 AG 1.9219 ["INTERCHROMOSOMAL[chr1--chr9]"] AL353796.1--OTUD7B 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL353796.1^ENSG00000259994.1 chr10:30305298:- OTUD7B^ENSG00000264522.6 chr1:149944663:- NO_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr10--chr1]"] AL353576.1--PTER 1 0 1.00 0.00 ONLY_REF_SPLICE AL353576.1^ENSG00000287925.1 chr10:16527751:+ PTER^ENSG00000165983.15 chr10:16505020:+ YES_LDAS 0.0034 GT 1.4295 AG 1.8323 ["INTRACHROMOSOMAL[chr10:0.01Mb]","LOCAL_REARRANGEMENT:+:[7969]"] AL160286.2--ARID4A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL160286.2^ENSG00000261060.1 chr1:179590936:+ ARID4A^ENSG00000032219.19 chr14:58365518:+ NO_LDAS 0.0034 GT 0.9183 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr14]"] AL139353.1--ZNF675 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL139353.1^ENSG00000203546.7 chr14:31453275:- ZNF675^ENSG00000197372.10 chr19:23534298:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr19]"] AL139353.1--LINC00621 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL139353.1^ENSG00000203546.7 chr14:31453275:- LINC00621^ENSG00000262619.2 chr13:22859868:- YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr14--chr13]"] AL138778.1--AL136456.1 1 0 1.00 0.00 ONLY_REF_SPLICE AL138778.1^ENSG00000286285.1 chr1:193457750:+ AL136456.1^ENSG00000227240.2 chr1:193673210:+ YES_LDAS 0.0034 GT 1.5656 AG 1.5628 ["INTRACHROMOSOMAL[chr1:0.01Mb]","NEIGHBORS[8026]"] AL121894.3--C9orf116 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL121894.3^ENSG00000286117.2 chr20:23666906:+ C9orf116^ENSG00000160345.13 chr9:135498656:- NO_LDAS 0.0017 GT 1.5301 AG 1.9329 ["INTERCHROMOSOMAL[chr20--chr9]"] AL049828.1--AKR1C1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AL049828.1^ENSG00000258526.7 chr14:39470400:+ AKR1C1^ENSG00000187134.14 chr10:4967033:+ NO_LDAS 0.0017 GT 1.9656 AG 1.8256 ["INTERCHROMOSOMAL[chr14--chr10]"] AL049780.1--MLH3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL049780.1^ENSG00000258646.1 chr14:75004735:- MLH3^ENSG00000119684.16 chr14:75049718:- YES_LDAS 0.0034 GT 1.5628 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr14:0.01Mb]","LOCAL_REARRANGEMENT:-:[5288]"] AL035446.2--TMA16 1 0 1.00 0.00 ONLY_REF_SPLICE AL035446.2^ENSG00000285875.1 chr6:140898188:- TMA16^ENSG00000198498.10 chr4:163507033:+ YES_LDAS 0.0034 GT 1.9086 AG 1.4295 ["INTERCHROMOSOMAL[chr6--chr4]"] AL024497.2--TARID 1 0 1.00 0.00 ONLY_REF_SPLICE AL024497.2^ENSG00000234567.1 chr6:133456534:- TARID^ENSG00000227954.7 chr6:133538192:- YES_LDAS 0.0034 GT 1.6729 AG 1.7232 ["INTRACHROMOSOMAL[chr6:0.05Mb]","LOCAL_REARRANGEMENT:-:[45647]"] AL022324.1--AP000346.2 1 0 0.50 0.00 ONLY_REF_SPLICE AL022324.1^ENSG00000230637.2 chr22:25327738:+ AP000346.2^ENSG00000234353.2 chr22:23638942:- YES_LDAS 0.0017 GT 1.7465 AG 1.9086 ["INTRACHROMOSOMAL[chr22:1.69Mb]"] AL021707.2--MRPS35 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL021707.2^ENSG00000228274.4 chr22:38674891:- MRPS35^ENSG00000061794.13 chr12:27735447:+ NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr22--chr12]"] AL008725.1--PRELID2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AL008725.1^ENSG00000286100.1 chr20:44864458:- PRELID2^ENSG00000186314.11 chr5:145796547:- YES_LDAS 0.0034 GT 1.9899 AG 1.9656 ["INTERCHROMOSOMAL[chr20--chr5]"] AKAP10--ALG14 1 0 0.50 0.00 INCL_NON_REF_SPLICE AKAP10^ENSG00000108599.15 chr17:19909234:- ALG14^ENSG00000172339.10 chr1:95064872:- NO_LDAS 0.0017 GT 1.7968 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr1]"] AGTPBP1--INTS13 1 0 1.00 0.00 ONLY_REF_SPLICE AGTPBP1^ENSG00000135049.16 chr9:85596362:- INTS13^ENSG00000064102.15 chr12:26914578:- YES_LDAS 0.0034 GT 1.6895 AG 1.4566 ["INTERCHROMOSOMAL[chr9--chr12]"] AF121898.1--FAAH 1 0 1.00 0.00 ONLY_REF_SPLICE AF121898.1^ENSG00000253500.6 chr8:87636601:- FAAH^ENSG00000117480.16 chr1:46402091:+ NO_LDAS 0.0034 GT 1.8323 AG 1.7819 ["INTERCHROMOSOMAL[chr8--chr1]"] AF064860.1--PCP4 1 0 1.00 0.00 ONLY_REF_SPLICE AF064860.1^ENSG00000225330.1 chr21:39630490:+ PCP4^ENSG00000183036.11 chr21:39928984:+ YES_LDAS 0.0034 GT 1.9329 AG 1.5329 ["INTRACHROMOSOMAL[chr21:0.14Mb]"] AF064860.1--IGSF5 1 0 1.00 0.00 ONLY_REF_SPLICE AF064860.1^ENSG00000225330.1 chr21:39630490:+ IGSF5^ENSG00000183067.5 chr21:39765535:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7056 ["INTRACHROMOSOMAL[chr21:0.02Mb]","NEIGHBORS[19322]"] ADSS2--AC007906.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADSS2^ENSG00000035687.10 chr1:244418838:- AC007906.2^ENSG00000277639.2 chr16:53044186:- YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr1--chr16]"] ADO--AL356776.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE ADO^ENSG00000181915.5 chr10:62805852:+ AL356776.2^ENSG00000286340.1 chr6:79078004:+ NO_LDAS 0.0017 GT 1.9086 AG 1.2310 ["INTERCHROMOSOMAL[chr10--chr6]"] ADGRE2--MRPL37 1 0 1.00 0.00 ONLY_REF_SPLICE ADGRE2^ENSG00000127507.18 chr19:14746232:- MRPL37^ENSG00000116221.15 chr1:54205018:+ YES_LDAS 0.0034 GT 1.7819 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr1]"] ADD3--PLEKHO2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ADD3^ENSG00000148700.15 chr10:110122212:+ PLEKHO2^ENSG00000241839.10 chr15:64848593:+ YES_LDAS 0.0034 GT 1.7232 AG 1.7968 ["INTERCHROMOSOMAL[chr10--chr15]"] ACYP2--C4orf50 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACYP2^ENSG00000170634.13 chr2:54138752:+ C4orf50^ENSG00000181215.15 chr4:6018161:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr2--chr4]"] ACYP1--MLH3 1 0 1.00 0.00 ONLY_REF_SPLICE ACYP1^ENSG00000119640.9 chr14:75069210:- MLH3^ENSG00000119684.16 chr14:75049718:- YES_LDAS 0.0034 GT 1.5628 AG 1.8892 ["INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[1705]"] ACVR1B--UHRF2 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACVR1B^ENSG00000135503.13 chr12:51976575:+ UHRF2^ENSG00000147854.17 chr9:6460710:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6895 ["INTERCHROMOSOMAL[chr12--chr9]"] ACTR8--SACM1L 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACTR8^ENSG00000113812.14 chr3:53868674:- SACM1L^ENSG00000211456.13 chr3:45703438:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTRACHROMOSOMAL[chr3:8.12Mb]"] ACTBP7--ACTG1P3 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACTBP7^ENSG00000185607.5 chr15:43989463:- ACTG1P3^ENSG00000215388.3 chr20:1161168:+ YES_LDAS 0.0034 GC 1.8892 AG 1.6729 ["INTERCHROMOSOMAL[chr15--chr20]"] ACSL1--ZBTB34 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACSL1^ENSG00000151726.15 chr4:184773663:- ZBTB34^ENSG00000177125.5 chr9:126881764:+ NO_LDAS 0.0034 GT 1.8892 AG 1.5219 ["INTERCHROMOSOMAL[chr4--chr9]"] ACP7--GEMIN7-AS1 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACP7^ENSG00000183760.11 chr19:39084400:+ GEMIN7-AS1^ENSG00000267348.3 chr19:45091000:- NO_LDAS 0.0034 GT 1.2729 AG 1.8892 ["INTRACHROMOSOMAL[chr19:5.97Mb]"] ACP6--TBC1D15 1 0 1.00 0.00 ONLY_REF_SPLICE ACP6^ENSG00000162836.12 chr1:147648246:- TBC1D15^ENSG00000121749.16 chr12:71880469:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTERCHROMOSOMAL[chr1--chr12]"] ACOT9--POLA1 1 0 1.00 0.00 ONLY_REF_SPLICE ACOT9^ENSG00000123130.17 chrX:23721881:- POLA1^ENSG00000101868.13 chrX:24699425:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chrX:0.93Mb]"] ACOT9--APOO 1 0 1.00 0.00 ONLY_REF_SPLICE ACOT9^ENSG00000123130.17 chrX:23743125:- APOO^ENSG00000184831.14 chrX:23880952:- YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["Klijn_CellLines","DEEPEST2019","TumorFusionsNAR2018","ChimerSeq","TCGA_StarF2019","INTRACHROMOSOMAL[chrX:0.07Mb]","LOCAL_REARRANGEMENT:-:[66878]"] ACOT9--AL354714.2 1 0 0.50 0.00 INCL_NON_REF_SPLICE ACOT9^ENSG00000123130.17 chrX:23743125:- AL354714.2^ENSG00000213080.3 chr1:160895029:+ NO_LDAS 0.0017 GT 1.6895 AG 1.9656 ["INTERCHROMOSOMAL[chrX--chr1]"] ACER3--FCHSD2 1 0 1.00 0.00 ONLY_REF_SPLICE ACER3^ENSG00000078124.13 chr11:76926667:+ FCHSD2^ENSG00000137478.15 chr11:72989097:- NO_LDAS 0.0034 GT 1.9329 AG 1.8323 ["DEEPEST2019","ChimerSeq","INTRACHROMOSOMAL[chr11:3.72Mb]"] ACER3--ALG8 1 0 1.00 0.00 ONLY_REF_SPLICE ACER3^ENSG00000078124.13 chr11:76959031:+ ALG8^ENSG00000159063.14 chr11:78121174:- YES_LDAS 0.0034 GT 1.6729 AG 1.9329 ["INTRACHROMOSOMAL[chr11:1.07Mb]"] ACAT1--AC024451.4 1 0 1.00 0.00 INCL_NON_REF_SPLICE ACAT1^ENSG00000075239.14 chr11:108140215:+ AC024451.4^ENSG00000269924.1 chr8:47527638:+ NO_LDAS 0.0034 GT 1.8295 AG 1.9656 ["INTERCHROMOSOMAL[chr11--chr8]"] ACADM--SSX2IP 1 0 1.00 0.00 ONLY_REF_SPLICE ACADM^ENSG00000117054.15 chr1:75761370:+ SSX2IP^ENSG00000117155.17 chr1:84647607:- YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr1:8.86Mb]"] ACADM--OSBPL3 1 0 1.00 0.00 ONLY_REF_SPLICE ACADM^ENSG00000117054.15 chr1:75740110:+ OSBPL3^ENSG00000070882.13 chr7:24800279:- NO_LDAS 0.0034 GT 1.7465 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr7]"] ACAD11--INSL6 1 0 1.00 0.00 ONLY_REF_SPLICE ACAD11^ENSG00000240303.8 chr3:132618634:- INSL6^ENSG00000120210.8 chr9:5133592:- NO_LDAS 0.0034 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr9]"] ACAD11--AL513493.1 1 0 0.50 0.00 ONLY_REF_SPLICE ACAD11^ENSG00000240303.8 chr3:132618634:- AL513493.1^ENSG00000285079.1 chr1:65710813:+ YES_LDAS 0.0017 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr3--chr1]"] AC242842.2--NBPF11 1 0 0.08 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ NBPF11^ENSG00000263956.6 chr1:148143686:- YES_LDAS 0.0003 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr1:1.46Mb]"] AC242842.2--IMMP2L 1 0 0.20 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ IMMP2L^ENSG00000184903.10 chr7:111561923:- NO_LDAS 0.0007 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr7]"] AC242842.2--AC073046.1 1 0 0.17 0.00 ONLY_REF_SPLICE AC242842.2^ENSG00000284964.1 chr1:149607554:+ AC073046.1^ENSG00000235499.1 chr2:73985980:+ YES_LDAS 0.0006 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr1--chr2]"] AC242842.1--MAP3K1 1 0 0.20 0.00 ONLY_REF_SPLICE AC242842.1^ENSG00000275557.1 chr1:149608516:+ MAP3K1^ENSG00000095015.6 chr5:56856600:+ YES_LDAS 0.0007 GT 1.7819 AG 1.7819 ["INTERCHROMOSOMAL[chr1--chr5]"] AC242842.1--LINC00623 1 0 1.00 0.00 ONLY_REF_SPLICE AC242842.1^ENSG00000275557.1 chr1:149608516:+ LINC00623^ENSG00000226067.7 chr1:120952439:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5628 ["INTRACHROMOSOMAL[chr1:28.60Mb]"] AC140076.1--AC005094.1 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC140076.1^ENSG00000227309.1 chr3:17465389:+ AC005094.1^ENSG00000229949.1 chr7:21401030:- NO_LDAS 0.0011 GT 1.8256 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr7]"] AC138866.1--PGBD2 1 0 0.20 0.00 ONLY_REF_SPLICE AC138866.1^ENSG00000254701.3 chr5:70197255:- PGBD2^ENSG00000185220.12 chr1:248917279:+ YES_LDAS 0.0007 GT 1.9329 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr1]"] AC138393.1--AC015802.6 1 0 0.33 0.00 INCL_NON_REF_SPLICE AC138393.1^ENSG00000229930.1 chr1:224030704:- AC015802.6^ENSG00000284526.1 chr17:76564707:- NO_LDAS 0.0011 GT 1.7819 AG 1.7056 ["INTERCHROMOSOMAL[chr1--chr17]"] AC138207.8--RNF135 1 0 1.00 0.00 ONLY_REF_SPLICE AC138207.8^ENSG00000266865.6 chr17:31024426:+ RNF135^ENSG00000181481.14 chr17:30984617:+ YES_LDAS 0.0034 GT 1.8323 AG 1.6895 ["INTRACHROMOSOMAL[chr17:0.01Mb]","LOCAL_REARRANGEMENT:+:[8586]"] AC138207.2--BEX2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC138207.2^ENSG00000264107.1 chr17:31095204:- BEX2^ENSG00000133134.12 chrX:103309734:- YES_LDAS 0.0034 GT 1.2729 AG 1.4295 ["INTERCHROMOSOMAL[chr17--chrX]"] AC137723.1--YRDC 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC137723.1^ENSG00000279372.1 chr17:82035724:- YRDC^ENSG00000196449.4 chr1:37804441:- NO_LDAS 0.0034 GT 1.9086 AG 1.9329 ["INTERCHROMOSOMAL[chr17--chr1]"] AC134878.2--PSMD14 1 0 0.33 0.00 ONLY_REF_SPLICE AC134878.2^ENSG00000278212.2 chrY:11212744:- PSMD14^ENSG00000115233.12 chr2:161367478:+ YES_LDAS 0.0011 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chrY--chr2]"] AC134407.3--ZNF800 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC134407.3^ENSG00000279880.1 chr17:67975958:+ ZNF800^ENSG00000048405.10 chr7:127373479:- YES_LDAS 0.0034 GT 1.9656 AG 1.8062 ["INTERCHROMOSOMAL[chr17--chr7]"] AC120057.3--NBPF19 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC120057.3^ENSG00000279641.1 chr17:7243696:+ NBPF19^ENSG00000271383.7 chr1:149501602:+ YES_LDAS 0.0034 GT 1.2310 AG 0.9710 ["INTERCHROMOSOMAL[chr17--chr1]"] AC117481.1--AL391058.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC117481.1^ENSG00000287398.1 chr3:75214555:+ AL391058.1^ENSG00000232499.2 chr1:113450190:+ YES_LDAS 0.0017 GT 1.9086 AG 1.5301 ["INTERCHROMOSOMAL[chr3--chr1]"] AC115284.4--IQCF1 1 0 1.00 0.00 ONLY_REF_SPLICE AC115284.4^ENSG00000287707.1 chr3:51929275:- IQCF1^ENSG00000173389.16 chr3:51903089:- YES_LDAS 0.0034 GT 1.9219 AG 1.5656 ["INTRACHROMOSOMAL[chr3:0.02Mb]","NEIGHBORS[23718]"] AC114781.2--COQ2 1 0 1.00 0.00 ONLY_REF_SPLICE AC114781.2^ENSG00000250057.1 chr4:83238522:- COQ2^ENSG00000173085.15 chr4:83279114:- NO_LDAS 0.0034 GT 1.8892 AG 1.9329 ["INTRACHROMOSOMAL[chr4:0.01Mb]","LOCAL_REARRANGEMENT:-:[14323]"] AC114489.1--SYNC 1 0 1.00 0.00 ONLY_REF_SPLICE AC114489.1^ENSG00000224409.1 chr1:32725078:- SYNC^ENSG00000162520.15 chr1:32696044:- YES_LDAS 0.0034 GT 1.7819 AG 1.4716 ["INTRACHROMOSOMAL[chr1:0.01Mb]","NEIGHBORS[14138]"] AC105052.5--AC004980.4 1 0 0.03 0.00 INCL_NON_REF_SPLICE AC105052.5^ENSG00000286830.1 chr7:102703315:- AC004980.4^ENSG00000250778.1 chr7:76521938:+ NO_LDAS 0.0001 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr7:26.18Mb]"] AC104462.1--SMYD3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC104462.1^ENSG00000231612.1 chr1:245673692:- SMYD3^ENSG00000185420.19 chr1:245749664:- YES_LDAS 0.0034 GT 1.7819 AG 1.6729 ["INTRACHROMOSOMAL[chr1:0.07Mb]","LOCAL_REARRANGEMENT:-:[72864]"] AC104383.1--GALNT18 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC104383.1^ENSG00000286959.1 chr11:11810773:- GALNT18^ENSG00000110328.6 chr11:11448936:- YES_LDAS 0.0034 GC 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr11:0.16Mb]"] AC104117.3--ZNF454 1 0 1.00 0.00 ONLY_REF_SPLICE AC104117.3^ENSG00000254035.1 chr5:178969693:+ ZNF454^ENSG00000178187.8 chr5:178942685:+ YES_LDAS 0.0034 GT 1.6895 AG 1.8892 ["INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:+:[2957]"] AC104078.1--KIF17 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC104078.1^ENSG00000247193.3 chr4:36248606:+ KIF17^ENSG00000117245.13 chr1:20717598:- NO_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTERCHROMOSOMAL[chr4--chr1]"] AC099489.1--KCNAB2 1 0 1.00 0.00 ONLY_REF_SPLICE AC099489.1^ENSG00000188897.9 chr16:11467152:- KCNAB2^ENSG00000069424.15 chr1:6085204:+ NO_LDAS 0.0034 GT 1.9329 AG 1.8892 ["INTERCHROMOSOMAL[chr16--chr1]"] AC097533.1--AC025569.1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC097533.1^ENSG00000237868.1 chr4:122078217:- AC025569.1^ENSG00000258168.6 chr12:70538867:+ NO_LDAS 0.0017 GT 1.6895 AG 1.5546 ["INTERCHROMOSOMAL[chr4--chr12]"] AC097493.3--LINC00882 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC097493.3^ENSG00000284648.1 chr4:9532651:+ LINC00882^ENSG00000242759.8 chr3:106926285:- YES_LDAS 0.0034 GT 1.7056 AG 1.7056 ["INTERCHROMOSOMAL[chr4--chr3]"] AC093763.2--MAP3K7 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC093763.2^ENSG00000251643.1 chr4:187442867:- MAP3K7^ENSG00000135341.18 chr6:90536401:- NO_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTERCHROMOSOMAL[chr4--chr6]"] AC092902.2--AC134684.3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC092902.2^ENSG00000272840.1 chr3:125797887:+ AC134684.3^ENSG00000284617.1 chr8:7610991:+ YES_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr3--chr8]"] AC092813.1--MSH4 1 0 1.00 0.00 ONLY_REF_SPLICE AC092813.1^ENSG00000225605.3 chr1:75934486:+ MSH4^ENSG00000057468.7 chr1:75803731:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8892 ["INTRACHROMOSOMAL[chr1:0.01Mb]","LOCAL_REARRANGEMENT:+:[13212]"] AC092567.1--ANKRD23 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC092567.1^ENSG00000226605.1 chr2:62825932:- ANKRD23^ENSG00000163126.15 chr2:96839406:- NO_LDAS 0.0034 GT 1.4716 AG 1.7819 ["INTRACHROMOSOMAL[chr2:33.97Mb]"] AC092279.1--SMIM20 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC092279.1^ENSG00000268362.6 chr19:24050742:+ SMIM20^ENSG00000250317.8 chr4:25914293:+ YES_LDAS 0.0034 GT 1.7819 AG 1.5628 ["INTERCHROMOSOMAL[chr19--chr4]"] AC092032.2--RBAK 1 0 0.25 0.00 ONLY_REF_SPLICE AC092032.2^ENSG00000288620.1 chr7:4985075:+ RBAK^ENSG00000146587.18 chr7:5048033:+ YES_LDAS 0.0008 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr7:0.06Mb]","NEIGHBORS[56644]"] AC092032.2--PMS2CL 1 0 0.25 0.00 ONLY_REF_SPLICE AC092032.2^ENSG00000288620.1 chr7:4985075:+ PMS2CL^ENSG00000187953.10 chr7:6731897:+ YES_LDAS 0.0008 GT 1.7819 AG 1.8892 ["INTRACHROMOSOMAL[chr7:1.72Mb]"] AC091212.1--METTL23 1 0 1.00 0.00 ONLY_REF_SPLICE AC091212.1^ENSG00000239462.1 chr3:98904994:+ METTL23^ENSG00000181038.14 chr17:76732978:+ YES_LDAS 0.0034 GT 1.9656 AG 1.7465 ["INTERCHROMOSOMAL[chr3--chr17]"] AC091117.2--C1orf112 1 0 1.00 0.00 ONLY_REF_SPLICE AC091117.2^ENSG00000259418.1 chr15:45042367:- C1orf112^ENSG00000000460.17 chr1:169827051:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9329 ["INTERCHROMOSOMAL[chr15--chr1]"] AC091057.6--ARHGAP11B 1 0 1.00 0.00 ONLY_REF_SPLICE AC091057.6^ENSG00000285035.1 chr15:30647714:+ ARHGAP11B^ENSG00000285077.2 chr15:30630703:+ YES_LDAS 0.0034 GT 1.9656 AG 1.5656 ["INTRACHROMOSOMAL[chr15:0.01Mb]","LOCAL_REARRANGEMENT:+:[9246]"] AC091057.4--MIGA1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ MIGA1^ENSG00000180488.15 chr1:77801331:+ YES_LDAS 0.0017 GT 1.8892 AG 1.8062 ["INTERCHROMOSOMAL[chr15--chr1]"] AC091057.4--ARHGAP11B 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ ARHGAP11B^ENSG00000285077.2 chr15:30634409:+ NO_LDAS 0.0017 GT 1.8892 AG 1.8295 ["INTRACHROMOSOMAL[chr15:0.12Mb]"] AC091057.4--ARHGAP11B 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC091057.4^ENSG00000284783.1 chr15:30750556:+ ARHGAP11B^ENSG00000285077.2 chr15:30633490:+ YES_LDAS 0.0017 GT 1.8892 AG 1.7465 ["INTRACHROMOSOMAL[chr15:0.12Mb]"] AC087359.1--ATG2B 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC087359.1^ENSG00000250869.2 chr8:67133745:- ATG2B^ENSG00000066739.12 chr14:96309590:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTERCHROMOSOMAL[chr8--chr14]"] AC087280.2--MRPL17 1 0 1.00 0.00 ONLY_REF_SPLICE AC087280.2^ENSG00000283415.2 chr11:6924498:- MRPL17^ENSG00000158042.9 chr11:6682815:- YES_LDAS 0.0034 GT 1.6895 AG 1.9899 ["TCGA_StarF2019","INTRACHROMOSOMAL[chr11:0.14Mb]"] AC083899.1--AC097527.1 1 0 0.25 0.00 ONLY_REF_SPLICE AC083899.1^ENSG00000204745.4 chr2:87132117:+ AC097527.1^ENSG00000237666.2 chr2:106475817:- YES_LDAS 0.0008 GT 1.8892 AG 1.8892 ["INTRACHROMOSOMAL[chr2:19.27Mb]"] AC083899.1--AC097527.1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC083899.1^ENSG00000204745.4 chr2:87164658:+ AC097527.1^ENSG00000237666.2 chr2:106470935:- YES_LDAS 0.0034 GT 1.9329 AG 1.5219 ["INTRACHROMOSOMAL[chr2:19.27Mb]"] AC079841.2--POLQ 1 0 1.00 0.00 ONLY_REF_SPLICE AC079841.2^ENSG00000287022.1 chr3:121430389:- POLQ^ENSG00000051341.14 chr3:121449426:- YES_LDAS 0.0034 GT 1.2419 AG 1.8892 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[229]"] AC079841.2--POLQ 1 0 1.00 0.00 ONLY_REF_SPLICE AC079841.2^ENSG00000287022.1 chr3:121430389:- POLQ^ENSG00000051341.14 chr3:121436275:- YES_LDAS 0.0034 GT 1.2419 AG 1.9656 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[229]"] AC079841.2--POLQ 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC079841.2^ENSG00000287022.1 chr3:121430389:- POLQ^ENSG00000051341.14 chr3:121487509:- YES_LDAS 0.0034 GT 1.2419 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[229]"] AC079841.2--POLQ 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC079841.2^ENSG00000287022.1 chr3:121430389:- POLQ^ENSG00000051341.14 chr3:121433036:- YES_LDAS 0.0034 GT 1.2419 AG 1.9329 ["INTRACHROMOSOMAL[chr3:0.00Mb]","LOCAL_REARRANGEMENT:-:[229]"] AC079142.1--VCX 1 0 0.33 0.00 ONLY_REF_SPLICE AC079142.1^ENSG00000285679.2 chrX:8228405:+ VCX^ENSG00000182583.12 chrX:7843498:+ YES_LDAS 0.0011 GT 1.7465 AG 1.9329 ["INTRACHROMOSOMAL[chrX:0.08Mb]","LOCAL_REARRANGEMENT:+:[84300]"] AC078993.1--TFCP2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC078993.1^ENSG00000238178.7 chrX:16167597:- TFCP2^ENSG00000135457.10 chr12:51109222:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chrX--chr12]"] AC073655.2--CEP83 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC073655.2^ENSG00000258365.1 chr12:94278008:- CEP83^ENSG00000173588.15 chr12:94400981:- YES_LDAS 0.0034 GT 1.9329 AG 1.5058 ["INTRACHROMOSOMAL[chr12:0.02Mb]","LOCAL_REARRANGEMENT:-:[23605]"] AC073488.1--ADGRF3 1 0 0.17 0.00 INCL_NON_REF_SPLICE AC073488.1^ENSG00000232111.2 chrX:9404753:+ ADGRF3^ENSG00000173567.15 chr2:26313625:- NO_LDAS 0.0006 GT 1.8892 AG 1.8295 ["INTERCHROMOSOMAL[chrX--chr2]"] AC073316.1--CARD11 1 0 1.00 0.00 ONLY_REF_SPLICE AC073316.1^ENSG00000217455.8 chr7:3158138:- CARD11^ENSG00000198286.10 chr7:2958631:- YES_LDAS 0.0034 GT 1.8256 AG 1.8323 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr7:0.10Mb]","NEIGHBORS[96367]"] AC068989.1--DDX60 1 0 1.00 0.00 ONLY_REF_SPLICE AC068989.1^ENSG00000287188.1 chr4:168194397:- DDX60^ENSG00000137628.18 chr4:168237795:- NO_LDAS 0.0034 GT 1.7056 AG 1.9656 ["INTRACHROMOSOMAL[chr4:0.02Mb]","LOCAL_REARRANGEMENT:-:[21430]"] AC068989.1--DDX60 1 0 1.00 0.00 ONLY_REF_SPLICE AC068989.1^ENSG00000287188.1 chr4:168194397:- DDX60^ENSG00000137628.18 chr4:168225676:- YES_LDAS 0.0034 GT 1.7056 AG 1.7968 ["INTRACHROMOSOMAL[chr4:0.02Mb]","LOCAL_REARRANGEMENT:-:[21430]"] AC068633.1--LSAMP 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC068633.1^ENSG00000243276.6 chr3:118077358:- LSAMP^ENSG00000185565.12 chr3:116485068:- YES_LDAS 0.0034 GT 1.8892 AG 1.8323 ["INTRACHROMOSOMAL[chr3:0.87Mb]"] AC068587.4--FAM86B1 1 0 0.11 0.00 ONLY_REF_SPLICE AC068587.4^ENSG00000283674.3 chr8:12601158:- FAM86B1^ENSG00000186523.14 chr8:12189888:- YES_LDAS 0.0004 GT 1.3996 AG 1.9899 ["INTRACHROMOSOMAL[chr8:0.29Mb]"] AC068189.1--CBWD6 1 0 0.50 0.00 ONLY_REF_SPLICE AC068189.1^ENSG00000254248.1 chr8:95078521:- CBWD6^ENSG00000215126.10 chr9:41156439:- NO_LDAS 0.0017 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr8--chr9]"] AC053527.2--ALB 1 0 1.00 0.00 ONLY_REF_SPLICE AC053527.2^ENSG00000250220.1 chr4:73259408:+ ALB^ENSG00000163631.17 chr4:73404369:+ YES_LDAS 0.0034 GT 1.8062 AG 1.9086 ["INTRACHROMOSOMAL[chr4:0.08Mb]","NEIGHBORS[79161]"] AC027176.1--TSPAN9 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC027176.1^ENSG00000259273.1 chr15:89936539:+ TSPAN9^ENSG00000011105.14 chr12:3083653:+ NO_LDAS 0.0017 GT 1.2867 AG 1.9656 ["INTERCHROMOSOMAL[chr15--chr12]"] AC026150.2--GOLGA8H 1 0 0.10 0.00 INCL_NON_REF_SPLICE AC026150.2^ENSG00000260784.1 chr15:30517819:+ GOLGA8H^ENSG00000261794.1 chr15:30612597:+ NO_LDAS 0.0003 GT 1.7056 AG 1.9329 ["INTRACHROMOSOMAL[chr15:0.09Mb]","NEIGHBORS[86259]"] AC025437.1--PIAS3 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC025437.1^ENSG00000253134.1 chr5:158278743:+ PIAS3^ENSG00000131788.16 chr1:145853886:- NO_LDAS 0.0034 GT 1.9219 AG 1.7465 ["INTERCHROMOSOMAL[chr5--chr1]"] AC025178.1--GOLPH3 1 0 1.00 0.00 ONLY_REF_SPLICE AC025178.1^ENSG00000250764.1 chr5:32121495:- GOLPH3^ENSG00000113384.14 chr5:32143880:- NO_LDAS 0.0034 GT 1.8892 AG 1.8892 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[2775]"] AC025178.1--GOLPH3 1 0 1.00 0.00 ONLY_REF_SPLICE AC025178.1^ENSG00000250764.1 chr5:32121495:- GOLPH3^ENSG00000113384.14 chr5:32135686:- NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[2775]"] AC022400.4--TIMM23 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC022400.4^ENSG00000272140.2 chr10:73713266:- TIMM23^ENSG00000265354.4 chr10:45975454:+ YES_LDAS 0.0034 GT 1.9329 AG 1.9656 ["INTRACHROMOSOMAL[chr10:27.70Mb]"] AC022167.1--PMM2 1 0 0.50 0.00 ONLY_REF_SPLICE AC022167.1^ENSG00000259939.1 chr16:8853636:+ PMM2^ENSG00000140650.12 chr16:8847724:+ YES_LDAS 0.0017 GT 1.9656 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[3987]"] AC021851.1--NUP35 1 0 1.00 0.00 ONLY_REF_SPLICE AC021851.1^ENSG00000272800.3 chr2:183188763:+ NUP35^ENSG00000163002.13 chr2:183157444:+ YES_LDAS 0.0034 GT 0.9056 AG 1.9086 ["INTRACHROMOSOMAL[chr2:0.02Mb]","LOCAL_REARRANGEMENT:+:[17126]"] AC021851.1--NUP35 1 0 1.00 0.00 ONLY_REF_SPLICE AC021851.1^ENSG00000272800.3 chr2:183188763:+ NUP35^ENSG00000163002.13 chr2:183151508:+ YES_LDAS 0.0034 GT 0.9056 AG 1.8256 ["INTRACHROMOSOMAL[chr2:0.02Mb]","LOCAL_REARRANGEMENT:+:[17126]"] AC021087.3--SECISBP2L 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC021087.3^ENSG00000260774.1 chr5:215185:- SECISBP2L^ENSG00000138593.9 chr15:48999973:- NO_LDAS 0.0034 GT 1.7819 AG 1.8295 ["INTERCHROMOSOMAL[chr5--chr15]"] AC016907.2--ALK 1 0 1.00 0.00 ONLY_REF_SPLICE AC016907.2^ENSG00000233862.7 chr2:30119768:- ALK^ENSG00000171094.18 chr2:29717697:- YES_LDAS 0.0034 GT 1.8062 AG 1.9329 ["CCLE_StarF2019","INTRACHROMOSOMAL[chr2:0.13Mb]"] AC016831.1--SLC35F3 1 0 1.00 0.00 ONLY_REF_SPLICE AC016831.1^ENSG00000226380.9 chr7:130912110:- SLC35F3^ENSG00000183780.13 chr1:234231417:+ YES_LDAS 0.0034 GT 1.8892 AG 1.4295 ["INTERCHROMOSOMAL[chr7--chr1]"] AC016831.1--SEM1 1 0 1.00 0.00 ONLY_REF_SPLICE AC016831.1^ENSG00000226380.9 chr7:130912110:- SEM1^ENSG00000127922.9 chr7:96673859:- NO_LDAS 0.0034 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr7:34.17Mb]"] AC016831.1--EXOC4 1 0 1.00 0.00 ONLY_REF_SPLICE AC016831.1^ENSG00000226380.9 chr7:130912110:- EXOC4^ENSG00000131558.15 chr7:133817325:+ YES_LDAS 0.0034 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chr7:2.34Mb]"] AC016821.1--TSPAN15 1 0 1.00 0.00 ONLY_REF_SPLICE AC016821.1^ENSG00000287306.1 chr10:69511870:+ TSPAN15^ENSG00000099282.10 chr10:69483691:+ YES_LDAS 0.0034 GT 1.8323 AG 1.8062 ["INTRACHROMOSOMAL[chr10:0.00Mb]","LOCAL_REARRANGEMENT:+:[2500]"] AC016597.1--NPIPB10P 1 0 0.06 0.00 ONLY_REF_SPLICE AC016597.1^ENSG00000261329.6 chr16:27685266:- NPIPB10P^ENSG00000196796.5 chr16:29050502:+ NO_LDAS 0.0002 GT 1.9329 AG 1.8892 ["INTRACHROMOSOMAL[chr16:1.32Mb]"] AC016526.2--ESRRB 1 0 1.00 0.00 ONLY_REF_SPLICE AC016526.2^ENSG00000258454.1 chr14:76252108:+ ESRRB^ENSG00000119715.15 chr14:76439341:+ YES_LDAS 0.0034 GT 1.5058 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.05Mb]","NEIGHBORS[47238]"] AC016526.2--ESRRB 1 0 1.00 0.00 ONLY_REF_SPLICE AC016526.2^ENSG00000258454.1 chr14:76236003:+ ESRRB^ENSG00000119715.15 chr14:76439341:+ YES_LDAS 0.0034 GT 1.6895 AG 1.9656 ["INTRACHROMOSOMAL[chr14:0.05Mb]","NEIGHBORS[47238]"] AC012615.1--SCAMP4 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC012615.1^ENSG00000261526.2 chr19:1875954:- SCAMP4^ENSG00000227500.10 chr19:1917694:+ YES_LDAS 0.0034 GT 1.7465 AG 1.5546 ["INTRACHROMOSOMAL[chr19:0.03Mb]","LOCAL_INVERSION:-:+:[29203]"] AC011632.1--ELAPOR2 1 0 1.00 0.00 ONLY_REF_SPLICE AC011632.1^ENSG00000253706.5 chr8:74866865:- ELAPOR2^ENSG00000164659.15 chr7:86947922:- YES_LDAS 0.0034 GT 1.7465 AG 1.3996 ["INTERCHROMOSOMAL[chr8--chr7]"] AC010538.1--SPATA33 1 0 1.00 0.00 ONLY_REF_SPLICE AC010538.1^ENSG00000275734.2 chr16:89682496:+ SPATA33^ENSG00000167523.14 chr16:89669286:+ YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTRACHROMOSOMAL[chr16:0.00Mb]","LOCAL_REARRANGEMENT:+:[296]"] AC010401.1--CDIN1 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC010401.1^ENSG00000262732.1 chr16:13934190:- CDIN1^ENSG00000186073.14 chr15:36579948:+ NO_LDAS 0.0034 GT 1.0530 AG 1.9656 ["INTERCHROMOSOMAL[chr16--chr15]"] AC010335.1--NIP7 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC010335.1^ENSG00000268199.2 chr19:18443446:+ NIP7^ENSG00000132603.15 chr16:69341576:+ NO_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTERCHROMOSOMAL[chr19--chr16]"] AC010327.4--GTF2H2C 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC010327.4^ENSG00000267577.1 chr19:55160003:+ GTF2H2C^ENSG00000183474.16 chr5:69566612:+ NO_LDAS 0.0034 GT 1.8892 AG 1.9086 ["INTERCHROMOSOMAL[chr19--chr5]"] AC010255.2--SNCAIP 1 0 1.00 0.00 ONLY_REF_SPLICE AC010255.2^ENSG00000250803.6 chr5:122129683:+ SNCAIP^ENSG00000064692.20 chr5:122391089:+ YES_LDAS 0.0034 GT 1.3753 AG 1.4295 ["INTRACHROMOSOMAL[chr5:0.13Mb]"] AC010198.2--YIPF5 1 0 1.00 0.00 ONLY_REF_SPLICE AC010198.2^ENSG00000285517.1 chr12:30800021:+ YIPF5^ENSG00000145817.17 chr5:144165604:- YES_LDAS 0.0034 GT 1.9219 AG 1.9899 ["INTERCHROMOSOMAL[chr12--chr5]"] AC009292.2--PIAS1 1 0 1.00 0.00 ONLY_REF_SPLICE AC009292.2^ENSG00000259410.5 chr15:67873866:+ PIAS1^ENSG00000033800.14 chr15:68086306:+ YES_LDAS 0.0034 GT 1.9656 AG 1.9329 ["INTRACHROMOSOMAL[chr15:0.18Mb]"] AC009093.8--AC009093.9 1 0 0.33 0.00 ONLY_REF_SPLICE AC009093.8^ENSG00000284649.1 chr16:29116326:+ AC009093.9^ENSG00000284671.1 chr16:29084443:+ YES_LDAS 0.0011 GT 1.8892 AG 1.9656 ["INTRACHROMOSOMAL[chr16:0.01Mb]","LOCAL_REARRANGEMENT:+:[8888]"] AC008770.3--SEMA7A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC008770.3^ENSG00000267274.1 chr19:11953408:+ SEMA7A^ENSG00000138623.10 chr15:74410764:- YES_LDAS 0.0034 AT 1.9656 AC 1.9086 ["INTERCHROMOSOMAL[chr19--chr15]"] AC008764.7--VRK2 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC008764.7^ENSG00000269578.1 chr19:16586981:- VRK2^ENSG00000028116.18 chr2:58159349:+ NO_LDAS 0.0017 GT 1.7819 AG 1.3996 ["INTERCHROMOSOMAL[chr19--chr2]"] AC008667.2--PSD2 1 0 1.00 0.00 ONLY_REF_SPLICE AC008667.2^ENSG00000250692.1 chr5:139855786:+ PSD2^ENSG00000146005.4 chr5:139833702:+ YES_LDAS 0.0034 GT 1.9329 AG 1.7232 ["INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:+:[3824]"] AC008267.2--AC008267.5 1 0 1.00 0.00 ONLY_REF_SPLICE AC008267.2^ENSG00000230189.7 chr7:66450071:- AC008267.5^ENSG00000244510.2 chr7:66481599:- NO_LDAS 0.0034 GT 1.8323 AG 1.8323 ["INTRACHROMOSOMAL[chr7:0.03Mb]","LOCAL_REARRANGEMENT:-:[26760]"] AC006435.2--ODF2L 1 0 1.00 0.00 ONLY_REF_SPLICE AC006435.2^ENSG00000263345.1 chr17:2377359:- ODF2L^ENSG00000122417.15 chr1:86387086:- YES_LDAS 0.0034 GT 1.9656 AG 1.8295 ["INTERCHROMOSOMAL[chr17--chr1]"] AC006001.3--FZD6 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC006001.3^ENSG00000229180.7 chr7:66554424:- FZD6^ENSG00000164930.12 chr8:103330022:+ YES_LDAS 0.0034 GT 1.5656 AG 1.7465 ["INTERCHROMOSOMAL[chr7--chr8]"] AC005740.1--C16orf46 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC005740.1^ENSG00000226040.3 chr5:141896266:- C16orf46^ENSG00000166455.14 chr16:81054094:- YES_LDAS 0.0017 GT 1.8062 AG 1.3383 ["INTERCHROMOSOMAL[chr5--chr16]"] AC005726.2--DNAJC17 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC005726.2^ENSG00000264044.1 chr17:28633967:+ DNAJC17^ENSG00000104129.10 chr15:40773762:- YES_LDAS 0.0017 GT 1.5058 AG 1.6895 ["INTERCHROMOSOMAL[chr17--chr15]"] AC005410.2--ZNF18 1 0 1.00 0.00 ONLY_REF_SPLICE AC005410.2^ENSG00000266368.1 chr17:11977248:- ZNF18^ENSG00000154957.14 chr17:11978744:- YES_LDAS 0.0034 GT 1.8256 AG 1.5329 ["INTRACHROMOSOMAL[chr17:0.00Mb]","NEIGHBORS_OVERLAP:-:-:[155]"] AC005336.1--UBE2D1 1 0 0.50 0.00 INCL_NON_REF_SPLICE AC005336.1^ENSG00000267056.2 chr19:15911549:- UBE2D1^ENSG00000072401.15 chr10:58361338:+ YES_LDAS 0.0017 GT 1.7056 AG 1.8256 ["INTERCHROMOSOMAL[chr19--chr10]"] AC004967.1--ARL8B 1 0 1.00 0.00 ONLY_REF_SPLICE AC004967.1^ENSG00000243554.1 chr7:97972135:- ARL8B^ENSG00000134108.14 chr3:5172150:+ NO_LDAS 0.0034 GT 1.4566 AG 1.9086 ["INTERCHROMOSOMAL[chr7--chr3]"] AC004923.1--ZBTB1 1 0 0.09 0.00 ONLY_REF_SPLICE AC004923.1^ENSG00000254610.3 chr11:67955482:- ZBTB1^ENSG00000126804.13 chr14:64516600:+ YES_LDAS 0.0003 GT 1.4566 AG 1.8323 ["INTERCHROMOSOMAL[chr11--chr14]"] AC004846.2--NUMB 1 0 1.00 0.00 ONLY_REF_SPLICE AC004846.2^ENSG00000258944.1 chr14:73273939:- NUMB^ENSG00000133961.20 chr14:73277293:- YES_LDAS 0.0034 GT 1.8892 AG 1.7232 ["INTRACHROMOSOMAL[chr14:0.00Mb]","LOCAL_REARRANGEMENT:-:[1026]"] AC004596.1--AC132217.2 1 0 1.00 0.00 INCL_NON_REF_SPLICE AC004596.1^ENSG00000267394.1 chr17:44198930:+ AC132217.2^ENSG00000284779.2 chr11:2135529:- YES_LDAS 0.0034 GT 1.7056 AG 1.8892 ["INTERCHROMOSOMAL[chr17--chr11]"] AC004083.1--TMEM64 1 0 1.00 0.00 ONLY_REF_SPLICE AC004083.1^ENSG00000254180.2 chr8:90618949:- TMEM64^ENSG00000180694.14 chr8:90631707:- YES_LDAS 0.0034 GT 1.6895 AG 1.8062 ["INTRACHROMOSOMAL[chr8:0.00Mb]","LOCAL_REARRANGEMENT:-:[1918]"] AC003991.1--IKZF5 1 0 1.00 0.00 ONLY_REF_SPLICE AC003991.1^ENSG00000228113.7 chr7:88253160:+ IKZF5^ENSG00000095574.12 chr10:122996176:- NO_LDAS 0.0034 GT 1.9656 AG 1.8892 ["INTERCHROMOSOMAL[chr7--chr10]"] AC002116.2--CFAP44 1 0 1.00 0.00 ONLY_REF_SPLICE AC002116.2^ENSG00000267698.1 chr19:36019384:+ CFAP44^ENSG00000206530.11 chr3:113294038:- NO_LDAS 0.0034 GT 1.5850 AG 1.9656 ["INTERCHROMOSOMAL[chr19--chr3]"] ABCC2--CUTC 1 0 1.00 0.00 ONLY_REF_SPLICE ABCC2^ENSG00000023839.12 chr10:99782877:+ CUTC^ENSG00000119929.13 chr10:99747257:+ YES_LDAS 0.0034 GT 1.8295 AG 1.8892 ["INTRACHROMOSOMAL[chr10:0.03Mb]","LOCAL_REARRANGEMENT:+:[26506]"] ABCB10--DENND1B 1 0 1.00 0.00 ONLY_REF_SPLICE ABCB10^ENSG00000135776.5 chr1:229518841:- DENND1B^ENSG00000213047.13 chr1:197583253:- YES_LDAS 0.0034 GT 1.7465 AG 1.9656 ["INTRACHROMOSOMAL[chr1:31.74Mb]"] ABCA9-AS1--LAMP3 1 0 1.00 0.00 ONLY_REF_SPLICE ABCA9-AS1^ENSG00000231749.3 chr17:69022467:+ LAMP3^ENSG00000078081.8 chr3:183124214:- YES_LDAS 0.0034 GT 1.9329 AG 1.8323 ["INTERCHROMOSOMAL[chr17--chr3]"] ABCA11P--PLEKHH2 1 0 1.00 0.00 ONLY_REF_SPLICE ABCA11P^ENSG00000251595.7 chr4:472575:- PLEKHH2^ENSG00000152527.14 chr2:43745866:+ YES_LDAS 0.0034 GT 1.8892 AG 1.6402 ["INTERCHROMOSOMAL[chr4--chr2]"] ABCA11P--CEP295 1 0 0.50 0.00 ONLY_REF_SPLICE ABCA11P^ENSG00000251595.7 chr4:472575:- CEP295^ENSG00000166004.15 chr11:93721954:+ YES_LDAS 0.0017 GT 1.8892 AG 1.9329 ["INTERCHROMOSOMAL[chr4--chr11]"] AACSP1--ZNF354A 1 0 1.00 0.00 INCL_NON_REF_SPLICE AACSP1^ENSG00000250420.8 chr5:178767130:- ZNF354A^ENSG00000169131.13 chr5:178749984:- NO_LDAS 0.0034 GC 1.8256 AG 1.9219 ["INTRACHROMOSOMAL[chr5:0.03Mb]","NEIGHBORS[34202]"] A4GALT--C2orf76 1 0 1.00 0.00 ONLY_REF_SPLICE A4GALT^ENSG00000128274.17 chr22:42720797:- C2orf76^ENSG00000186132.15 chr2:119339971:- YES_LDAS 0.0034 GT 1.8892 AG 1.8892 ["INTERCHROMOSOMAL[chr22--chr2]"] YIPF6--STARD8 1 1 1.00 1.00 ONLY_REF_SPLICE YIPF6^ENSG00000181704.12 chrX:68522917:+ STARD8^ENSG00000130052.13 chrX:68665499:+ YES_LDAS 0.0068 GT 1.8892 AG 1.7819 ["INTRACHROMOSOMAL[chrX:0.11Mb]"] TTC33--PRKAA1 1 1 1.00 0.50 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40746798:- PRKAA1^ENSG00000132356.11 chr5:40777586:- YES_LDAS 0.0051 GT 1.6402 AG 1.8892 ["DEEPEST2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[3416]"] TTC33--PRKAA1 1 1 1.00 0.50 ONLY_REF_SPLICE TTC33^ENSG00000113638.14 chr5:40728345:- PRKAA1^ENSG00000132356.11 chr5:40771863:- NO_LDAS 0.0051 GT 1.9086 AG 1.6402 ["DEEPEST2019","INTRACHROMOSOMAL[chr5:0.00Mb]","LOCAL_REARRANGEMENT:-:[3416]"] PKD1--NPIPA3 1 1 0.50 0.08 INCL_NON_REF_SPLICE PKD1^ENSG00000008710.20 chr16:2097868:- NPIPA3^ENSG00000224712.12 chr16:14711620:+ YES_LDAS 0.002 GT 1.8323 AG 1.7465 ["GTEx_recurrent_StarF2019","INTRACHROMOSOMAL[chr16:12.57Mb]"] CA13--CA3 1 1 1.00 0.17 ONLY_REF_SPLICE CA13^ENSG00000185015.8 chr8:85268627:+ CA3^ENSG00000164879.7 chr8:85439712:+ YES_LDAS 0.004 GT 1.9086 AG 1.8892 ["DGD_PARALOGS","ConjoinG","GTEx_recurrent_StarF2019","HGNC_GENEFAM","INTRACHROMOSOMAL[chr8:0.09Mb]","NEIGHBORS[89363]"] AC114763.1--NXPH2 1 1 1.00 0.17 ONLY_REF_SPLICE AC114763.1^ENSG00000228043.5 chr2:138436473:- NXPH2^ENSG00000144227.5 chr2:138671665:- YES_LDAS 0.004 GT 1.3996 AG 1.8295 ["INTRACHROMOSOMAL[chr2:0.17Mb]"] WDR27--AL135910.1 1 2 1.00 0.33 INCL_NON_REF_SPLICE WDR27^ENSG00000184465.16 chr6:169582836:- AL135910.1^ENSG00000272848.2 chr6:169452439:- NO_LDAS 0.0045 GT 1.6729 AG 1.9899 ["INTRACHROMOSOMAL[chr6:0.00Mb]","NEIGHBORS[4737]"] AC005993.1--RGS6 1 2 1.00 0.20 ONLY_REF_SPLICE AC005993.1^ENSG00000266869.2 chr14:71908430:+ RGS6^ENSG00000182732.18 chr14:72352095:+ YES_LDAS 0.0041 GT 1.8892 AG 1.8323 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[3833]"] AC005993.1--RGS6 1 2 1.00 0.20 INCL_NON_REF_SPLICE AC005993.1^ENSG00000266869.2 chr14:71869984:+ RGS6^ENSG00000182732.18 chr14:72292287:+ YES_LDAS 0.0041 GT 1.8062 AG 1.9656 ["TCGA_StarF2019","CCLE_StarF2019","INTRACHROMOSOMAL[chr14:0.00Mb]","NEIGHBORS[3833]"]