#FusionName	JunctionReadCount	SpanningFragCount	est_J	est_S	SpliceType	LeftGene	LeftBreakpoint	RightGene	RightBreakpoint	JunctionReads	SpanningFrags	LargeAnchorSupport	FFPM	LeftBreakDinuc	LeftBreakEntropy	RightBreakDinuc	RightBreakEntropy	annots	breakpoint_ID	blacklisted	blacklist_reasons	aih_curated_reason	CALL	filter_reason	FILTER	total_reads
PANK2--MAVS	1244	36	1244.0	36.0	ONLY_REF_SPLICE	PANK2^ENSG00000125779.23	chr20:3889728:+	MAVS^ENSG00000088888.18	chr20:3854558:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:39678:4825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:5352:24176,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:17504:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:23021:19664,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:16250:22117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:17253:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:28999:21556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:33376:3018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:47615:24036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:16169:20631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:15999:4867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:36224:10781,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:49661:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1109:41863:20155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1109:7254:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:10676:29249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:15538:4909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:32818:28170,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:35965:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:36556:1771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:12917:20939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:26427:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:38780:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:8346:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1115:36839:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1115:40237:26474,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1116:24275:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1116:32923:21458,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:19923:17184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:15141:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:18264:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:34250:21766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:37640:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:48634:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:37987:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:35528:3606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:21613:2093,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:31742:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:2828:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:49807:29711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1131:47663:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1132:18992:14200,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1133:28263:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1136:16169:11467,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:27786:27974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:9430:14592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:48933:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:52016:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:2286:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:34023:29641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:7423:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:42947:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:3298:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:27115:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:50770:11369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1145:19397:18712,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1145:40026:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:7901:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:12245:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:12027:18109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:39970:2359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:30577:6269,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:17018:26334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:26063:29697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:37356:10640,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1152:16832:9253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:14737:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:23401:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:49621:16946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:34072:25129,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:19834:6437,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:31394:21220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:50195:13569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1161:29501:17492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:13329:8651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:29841:10346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:15578:17899,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:25707:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1166:43828:11986,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:46644:12938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:33214:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:34541:28324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:51029:23167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:19308:24274,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:38400:28394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:6930:14410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:48262:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1174:17318:12196,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:30909:7656,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:50826:22901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:15732:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:22228:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:7965:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:5959:8861,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:43578:10767,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:50511:19188,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:46911:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:11800:23322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1189:40358:19426,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:9228:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:12423:2569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1195:47372:5288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:9041:4307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:22212:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:18256:21388,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:19688:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:22163:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:26500:26418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:27430:11916,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:42146:5680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:47412:27946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1202:8402:16456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:38627:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:4074:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:38174:25620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:8580:29655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:25488:22481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:11849:6058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:1898:8384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:23992:10977,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1210:34436:22957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1214:37276:29473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:19526:1224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:20400:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:31604:15503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:35649:20603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:7674:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:2375:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:14227:1967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LLT4:2:1357:7885:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1359:21929:29599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:29590:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:37033:11117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1361:41863:20323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:34412:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:43780:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:45317:26306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1363:26330:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1364:33991:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:24259:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:2489:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1368:28603:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:17568:10949,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:21371:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:21338:29641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:38489:10052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1374:2286:11551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:2391:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:37470:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:37801:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:21201:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:30205:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:2319:13625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:26734:21612,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1379:19033:21416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:31354:29053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:38651:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:41749:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:4632:12420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:4139:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:23215:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:36572:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:35124:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:19146:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:27341:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:11032:3242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:43003:21990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:50891:15447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:9009:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:15967:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1397:2610:26685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:38991:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:29372:10430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:13038:26250,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:16314:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:38408:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:37397:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:40665:10150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:10635:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:26200:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:32365:17324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:22568:8483,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:7998:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:20723:7502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:40560:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:9276:29123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1417:36847:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:33959:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:38926:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:6105:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:11104:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:17479:27974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:5636:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:4624:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:6671:29179,&FFP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835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2482:21476:24358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:27454:17478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2493:8977:9211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2497:7537:11453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:14526:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1103:24307:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:43270:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:8694:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:47930:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:8127:29319,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1112:19227:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1114:28037:27932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:22066:4811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1118:31362:9786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:35649:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:38861:3242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1126:23984:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1127:30723:28380,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:7326:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:7626:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:20327:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:16161:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:38554:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:11177:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:14664:22761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:22843:28884,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:34218:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:6364:16259,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:34048:10486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:18305:23854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:22034:19048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:30876:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1149:38441:6493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1150:35318:3018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:7642:9590,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1153:33247:4027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1156:4980:19356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1157:51158:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:5263:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:9834:18655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:6259:22999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1165:33036:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1172:37510:19286,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1173:45762:29235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:13604:25157,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:12116:25914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:28368:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:42429:18950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:31030:25353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1184:18296:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1184:38060:16175,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1185:22730:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1185:34962:5288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1185:6461:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:45293:16315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:5506:26068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:22252:25816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1192:32535:25886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1192:8605:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:15934:18684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:32648:25578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:4187:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1195:17107:10767,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:9794:9253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:43084:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:22244:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:48618:21430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:24194:13457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:35140:13891,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:3006:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:9325:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:19283:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:15691:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:28595:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:24372:2976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:34290:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1240:3912:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1242:40617:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:18887:28394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1245:47639:24246,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:42655:19118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:8006:23083,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1251:24283:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1253:4584:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:13070:2625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:33190:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1259:37041:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:44104:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:27802:14746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:44613:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:3791:14914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:38966:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:6186:7516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:13839:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:1542:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:9535:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:39468:23602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:21759:16189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1274:46490:19678,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:17107:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1282:7601:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:12731:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:39929:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:36774:23420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:9155:22775,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1294:33740:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1297:25456:2443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:30448:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:43723:19426,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:25351:26194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1306:38918:23181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:22972:3971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:16355:2541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:17196:18964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1317:38796:21458,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1318:10797:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:14033:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:13782:11341,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:9980:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:24663:3368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1325:3532:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1325:41555:6339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:11735:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:14777:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:20837:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:40487:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:30674:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:25213:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:32373:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:4503:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:13604:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:21039:13597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:42405:28184,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:34816:2037,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1345:26556:2864	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:33109:4769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:20295:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:37543:8777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:44006:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:1154:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:18652:13219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:15683:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:9389:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:20982:9968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:14599:3620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:32624:14858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:50341:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:20683:21276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:18677:28086,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1118:24655:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:12682:24373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:12520:26250,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:18191:10795,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1357:30084:9057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1389:12844:22579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:30294:11019,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:49087:10248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:10579:21822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:12277:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:5102:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:21937:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:33870:23294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2411:47501:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2419:30771:11874,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:2804:23097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:19089:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:2788:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:2804:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:38764:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:13192:4489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:1890:12070	YES_LDAS	4.3306	GT	1.5656	AG	1.5628	"[""Klijn_CellLines"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[12716]""]"	chr20:3889728-chr20:3854558	False			1		PASS	1280
TCF7L2--AL158212.1	723	30	722.99	23.3	ONLY_REF_SPLICE	TCF7L2^ENSG00000148737.17	chr10:113040126:+	AL158212.1^ENSG00000225292.2	chr10:112888735:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:17318:17997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:45811:4853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:40641:19945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:15983:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:35997:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:22261:15461,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:27511:28310,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:21201:1154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:31475:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:43513:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:48990:24008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:18919:19314,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:51255:19132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1132:47242:9604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1132:47890:29725,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1135:35803:2569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1136:41782:26825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1136:43375:24288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1136:51546:22299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:29008:22915,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:14915:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:3799:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:8281:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1152:6283:3340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1153:50503:29571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:31249:5582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:36887:22887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1156:25124:21794,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1156:46951:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:7440:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:18199:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:27349:1575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:45738:12938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:33085:6297,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:21387:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:12908:2205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:14842:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:1510:6507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1174:2869:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:6679:4615,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:37979:9197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:6016:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:18515:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1181:12010:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1181:24129:26797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:40706:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:2739:17464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:5328:15839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:28433:11888,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:26176:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:12164:26895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:7949:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:10198:29039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:31216:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1189:43756:3256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:39929:17787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:51190:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:51708:5624,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:5692:2709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:3152:2261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:3031:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:24736:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1214:11687:17745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:1218:13317,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:39840:10346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:36272:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:43837:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:34832:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:33902:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:38562:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1227:26540:28955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:1477:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:38546:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:50648:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:19122:27371,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:5369:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:6801:1799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:42243:13051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:26289:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:12286:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:51854:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:12536:12882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:31710:25746,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23053:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:45891:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:47145:4531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:18515:29599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:14308:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:2092:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:38780:28436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1268:26783:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1272:30197:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:52032:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:42979:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:30140:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:47218:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:34606:19216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:48084:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:6922:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:36912:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:23798:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:30067:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:28377:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1302:44613:12840,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:16023:9646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:4641:11033,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:23668:20954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19291:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:30982:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1318:31977:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:33117:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:40722:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:48051:6577,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1324:49224:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:10093:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:42971:2373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:7051:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:45770:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:19955:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:9915:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1334:46288:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:45924:6787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:9147:6367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:20715:19174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1341:21565:21850,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:37065:26867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:6089:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:51643:4307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:1505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7:23LGNLLT4:3:2488:39994:20813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2488:5053:20687,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2492:4236:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2494:12795:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2496:21209:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:5166:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:30334:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:50430:3046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:1316:9141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1119:17164:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1120:28999:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1120:43610:8833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:29857:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:16064:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:28563:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:40536:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:38238:3312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:16306:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1132:44338:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:48836:2303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1135:29954:18950,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1137:42623:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:50511:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:17916:8216,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:11784:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:48569:2485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:40948:27932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:12091:28786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:50665:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:41563:7334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:41798:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1178:2715:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:32672:6030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:46628:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1189:48715:9211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1194:18385:27806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:23531:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:38254:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:33667:26418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:30148:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1212:20020:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:37955:16385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1218:1218:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:12925:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:25084:17633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:33287:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:42914:16512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1235:8208:3340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1240:45544:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:17293:11986,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:23207:2555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:16266:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1256:37235:12672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:32244:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:38149:14536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:48310:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1268:29574:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1269:18418:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:22382:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:44047:19819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:43084:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:7877:28492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1313:25755:4923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:42874:21598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:45301:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:42097:12294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:24817:26418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:40617:19342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:35156:22691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:6428:14073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:45131:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:29930:29221	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:21856:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:46385:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:6962:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:21185:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:42494:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:5555:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:20173:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:9632:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:10117:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:37640:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:39039:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:52072:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:5126:22719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1456:33578:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1489:45972:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2247:4592:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:33764:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:22099:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:20691:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:28805:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:46053:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:29501:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1169:14526:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:14357:19174	YES_LDAS	2.5249	GT	1.9219	AG	1.8892	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]"	chr10:113040126-chr10:112888735	False			1		PASS	753
COMMD10--AP3S1	282	19	282.0	19.0	ONLY_REF_SPLICE	COMMD10^ENSG00000145781.9	chr5:116092700:+	AP3S1^ENSG00000177879.17	chr5:115895087:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:15101:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:42388:1841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1130:8321:12728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:8022:7474,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:20100:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:7699:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:30229:10262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:17034:11677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:17738:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:22333:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:4082:20155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:51643:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:44055:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:10304:29277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:49297:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:13879:9856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:19591:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:12601:21262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:48456:5960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:34064:15923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1206:47040:2191,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1214:44095:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:39614:15251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:27956:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:17860:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:36887:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:30229:20827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:11533:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:41248:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:32511:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:42704:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:33020:22691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:7189:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:41126:9015,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:25569:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:44921:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:51320:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:12811:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:52153:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1283:13960:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:2189:3816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:37793:1729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:41935:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:10117:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1302:27948:3452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:51215:27301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:34072:17478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:12277:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:19162:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:16064:7306,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:21832:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:41960:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:45179:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:5619:5806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1349:37907:17506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:10595:14424,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1356:38578:22313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:30059:3298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:36046:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1385:30909:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:18434:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:29614:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:32907:24737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:43125:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:46272:11761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:46215:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1453:27543:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:49945:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:5781:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:9778:7684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1464:21581:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:21638:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:48140:7348,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:7278:6661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:14292:19819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:46029:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2103:39330:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:14543:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:10562:15208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:47526:1715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:14535:7600,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2136:42599:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:45082:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:46369:1701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:47437:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:39258:12504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:44241:22649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2207:11711:8370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2223:44112:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2224:14624:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2224:22981:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:32721:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:26888:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:44144:20463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:44298:15096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:12253:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2265:15109:8819,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:3451:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:50268:23252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2294:27034:20449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2308:17034:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:45479:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:26775:15096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:45802:11874,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:11177:20729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:21727:7754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:18167:24597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2357:36944:9758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:43335:23238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2362:11355:9183,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:31354:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:29016:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2407:18790:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:39557:6857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2422:16169:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:30650:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:45002:7151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:33409:8090,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:10061:26054,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:25610:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:42752:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:28393:13051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:49775:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:5805:15068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:29679:12252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:29719:10472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:3508:1476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:34509:29277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:30059:24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37:23LGNLLT4:4:1198:51902:2934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1213:26524:29011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:50656:28464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:5425:20435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:24801:12658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:18927:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:25772:14816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20448:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:34646:10767,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:5102:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:29639:21234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:39767:6885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:9640:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:9600:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1312:13273:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:10109:24036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:40892:13961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:4325:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1327:11315:17997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:46247:21276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1336:42882:28618,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:29372:14634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1344:45366:3466	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1107:46741:7165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:50228:14634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:7779:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44387:20715,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:51821:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:8710:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:26055:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:39783:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:29833:2653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1359:42477:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1479:34096:12560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1483:42016:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:47509:15839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:41749:17689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:19575:7053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:3419:8300,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1172:2529:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1196:3807:10094,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:40366:18543	YES_LDAS	1.0184	GT	1.9329	AG	1.8256	"[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""ChimerPub"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.17Mb]""]"	chr5:116092700-chr5:115895087	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	301
LEPROT--LEPR	272	10	272.0	10.0	ONLY_REF_SPLICE	LEPROT^ENSG00000213625.9	chr1:65425378:+	LEPR^ENSG00000116678.20	chr1:65565546:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:20440:3816,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:24493:28492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:15780:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:21621:14858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:30067:16007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:47056:1687,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:19809:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:6178:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:22665:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:18903:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:7512:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:44807:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:44031:12140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:15449:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1189:8063:19734,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:41668:5974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:20327:21528,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1202:23765:27259,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:43335:10318,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:29995:12350,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:12350:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:18782:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:5482:19608,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:2586:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:22430:27161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:41304:24344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:50082:29655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:43311:4419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:9017:19006,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:2335:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:31912:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1262:46417:17619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:13612:4965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:51425:7320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:49435:17100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1295:15643:2373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:13353:7039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:3977:8174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:17568:17282,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1324:9826:13121,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:38619:22299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:38360:11677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1335:48877:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:38578:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:40180:19090,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1345:6315:12308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:13281:8006,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:28045:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:47979:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:27398:6058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1363:6242:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:42680:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:52096:3550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:10409:9646,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1398:20165:3368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:2990:13611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:1914:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:38991:2513,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:22544:15755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:2408:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:30990:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:49419:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:39217:4783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:6550:2625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:11525:1967,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:26492:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1450:14939:8300,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:7893:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:27996:15447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:22762:11285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1468:28571:17226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:24137:15517,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1473:15724:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:35836:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:27543:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:40099:25255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:31653:2639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2107:11218:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:38400:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:6590:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:41167:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:3265:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:23749:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2133:11007:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:37445:15475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:43780:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2146:37947:20015,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2147:18547:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:28797:25858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2170:19397:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:22843:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2176:18038:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:12666:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:27511:8637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:2658:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2216:3281:9716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:50422:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2224:39063:22985,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:34509:13331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:36936:17170,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:41466:8903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:40115:8889,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:48593:15503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:23951:14998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:19534:13709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:31685:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:50559:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:36936:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:50131:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:43926:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2357:24437:12420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:30084:6983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:3128:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:40746:20968,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:4341:26096,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2411:18207:6002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2417:29242:3901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:10781:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:26718:10598,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:28789:9842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2463:49799:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:14082:17549,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:34565:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:49516:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:6582:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2488:33813:29669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:12981:15054,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:21718:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:29817:21514,&FFPE_HD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194:40188:11958,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:38950:24078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:50033:27469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:25683:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:41499:7193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1248:49402:20855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:41677:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1273:27147:25858,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1285:19672:24288,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:18385:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:37211:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1301:11808:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:39047:12336	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:7488:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:44039:15629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:17754:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:24040:24933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:39662:15335,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1396:47995:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:39913:9323,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:21524:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:14243:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:20068:18193	YES_LDAS	0.954	GT	1.8256	AG	1.9219	"[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[89682]""]"	chr1:65425378-chr1:65565546	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	282
TCF7L2--AL158212.1	194	16	194.0	2.96	ONLY_REF_SPLICE	TCF7L2^ENSG00000148737.17	chr10:113040126:+	AL158212.1^ENSG00000225292.2	chr10:112905977:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:51231:25059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1117:30933:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:16889:5764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:28134:21262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1134:13766:14508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:50357:28338,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:45099:22537,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:31435:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:42227:17731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1156:10878:22677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:3953:15419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:22455:26811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:45058:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:46385:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:43505:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:50754:29641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:8289:27133,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:51943:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:18515:14606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:17326:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:47687:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:34905:15222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:46458:17885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:48165:8455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:16703:22117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:37065:17647,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:51927:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:39290:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:5110:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:45349:8903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:40657:22103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:37405:28268,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:28975:15657,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1343:23434:24330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1349:17698:24429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:21128:28212,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:25440:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1356:1518:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:37712:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:27697:21738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:10142:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:8540:20645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:17140:3256,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:43278:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1416:34379:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:25108:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:51676:22299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:10740:21990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:37559:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:28951:10851,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:51093:24036,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1448:17439:27511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:13912:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:4123:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:7359:8707,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:22358:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:30512:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:45665:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2133:39654:14172,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:33748:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:40657:11481,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2147:43384:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2168:8030:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:29485:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:42809:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:48068:3242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:46239:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:51425:23518,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2191:21840:2261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:42364:28030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2197:16379:25339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:40479:10052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:42833:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:51805:1252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2269:1202:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2269:35949:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2275:43739:11103,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:4285:12574,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:25108:25522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2305:38651:6773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:35577:29697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:36871:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:42696:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:19963:27595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2334:15012:14704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2367:47882:18165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:48731:8903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2378:15635:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:38416:28842,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2406:17479:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:1485:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:20821:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2415:25367:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:36928:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:38101:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:21832:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:3589:5792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:19834:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:36806:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:31888:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:51821:27203,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:44039:21990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1106:46927:15559,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:45236:17226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1115:32454:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1124:27220:7179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:17536:28072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:21816:2247,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:50187:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:6380:26012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:44298:2569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:34986:23181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:10037:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:17301:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:33748:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1208:50325:10486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:5652:25451,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:37818:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:22786:10430,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:13410:7726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1295:36005:16231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:42704:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1306:21686:15727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1307:16233:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:5498:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:13014:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:3370:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:9575:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1344:43578:19903,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1349:11007:15979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1363:39686:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:10247:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1390:13790:19146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:44128:10682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:19623:27287,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:41256:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:13928:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1443:3403:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1444:47412:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:10902:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:34889:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2108:12472:11453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2110:39460:4699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:19356:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:6930:15867,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:4228:22173,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2169:48707:18081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2188:44726:7235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2197:36798:16091,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:31184:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:29258:2948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:45260:21136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2304:42275:18039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2309:43780:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2311:44435:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2331:26856:6325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2350:1712:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2350:37551:14760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2371:12625:8777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2379:3136:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2409:41175:7418,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2412:21573:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:47048:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:23070:3130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:23733:10388,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:8362:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2434:16331:5638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:12925:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2469:49564:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:18110:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:27495:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1107:17423:7221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:22576:11019,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:45592:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:19461:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:37300:23153,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1149:5102:12924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1154:5927:15138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:24332:26530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:25019:20799,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:1364:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:10231:10094,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1219:42356:8455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1246:41596:17142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:33360:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:2553:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:3759:4685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:35747:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1297:41863:4041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:31046:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:50842:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:16039:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:41814:14410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1320:7221:19847	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:46385:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:27098:6745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:12148:16918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15133:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:20149:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:5555:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:41418:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:9632:2527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:35981:24961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:5126:22719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1489:45972:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2247:4592:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:33764:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:22099:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:28805:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1139:29501:22145	YES_LDAS	0.6664	GT	1.9219	AG	1.9899	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[44136]""]"	chr10:113040126-chr10:112905977	False			1		PASS	210
SPAG9--MBTD1	173	3	173.0	2.88	ONLY_REF_SPLICE	SPAG9^ENSG00000008294.21	chr17:51120354:-	MBTD1^ENSG00000011258.16	chr17:51201696:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:27115:13331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:35253:21738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:1825:25325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1130:23709:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:31135:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:17051:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:48440:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:24065:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1175:48238:4405,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:28530:10514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:34404:27357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:37478:13149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:25974:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:38530:24387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:49540:1420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:29364:10444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:14721:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:44144:17717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1262:41013:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:23935:24835,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:30860:21332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:46474:7039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:7051:3466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:31135:20547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:20998:17647,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:29622:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:52185:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:33942:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:20893:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1351:32664:18039,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:8216:24373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1367:14745:25844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:12828:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:39913:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:43618:25886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:45471:28786,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:7148:23476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:36305:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:49297:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:11735:22145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:13086:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:36103:10206,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1483:24946:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:37219:13401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:12229:2177,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:37098:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:14559:13303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:22010:16848,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2180:28652:4307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:36734:5554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2192:45673:28268,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:29542:1673,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:45349:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:40609:12938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:8580:5806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:50834:18431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:8807:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:10659:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:1445:14073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:10376:2667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:13362:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:39654:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:42510:9253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:41604:21948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:31540:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:23183:20757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:36863:26825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:4924:27161,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:34622:6633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2344:4988:25844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:40568:6227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2366:14009:11621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2415:43917:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2418:22091:2443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:30771:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:46854:16133,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2460:26589:13485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:43675:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:5878:29011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:9559:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:23159:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1121:30011:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1127:10635:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:18652:5148,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:13831:3522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:2610:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1153:42841:12826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:1639:13373,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1176:6647:20225,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:16670:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:49864:29025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:4568:7179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:51198:2219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1251:9017:28366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1263:34307:3620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:50179:10402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:16970:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:7804:6731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:35884:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1293:18968:1182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:16784:21416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1322:30359:12672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:34703:26474,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1329:34751:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1348:37049:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1361:37033:2709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:45568:21724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:48302:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1380:2934:12056,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1387:36321:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:24396:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1410:32155:1575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1434:3734:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:46094:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:43278:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:33198:18123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1461:46992:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:44249:18684,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:48618:4559,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1483:28983:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2116:14057:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2120:49589:22803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:26330:10795,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:18604:11986,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:46069:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2167:25594:4279,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2194:49289:16007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2216:33255:8413,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2240:25230:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2290:30973:10739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2324:3767:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:38133:8174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2342:49435:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:25820:2205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:1688:27301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2378:34290:18109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2384:1930:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2410:22900:26572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2411:47938:17394,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2412:21508:29207,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2425:33012:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:8321:14073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2450:28967:17464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2452:48658:17464,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2465:5344:3873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2468:44662:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:10910:16988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1107:47962:5302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:6534:23644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:3144:10262,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:8273:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:44071:12882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:39800:25241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:15772:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1166:10643:1701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:15716:2555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:10368:21066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:23587:5372,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:21096:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1206:20602:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:28110:13037,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:14300:11369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1235:27123:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1253:25545:20869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:7885:24274,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:28571:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:25683:28142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:26516:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1274:30148:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1275:32163:18431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1287:28053:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:26767:19034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:27883:22117	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:22066:27343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:2108:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2321:11849:21780	YES_LDAS	0.595	GT	1.7819	AG	1.6402	"[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[56557]""]"	chr17:51120354-chr17:51201696	False			1		PASS	176
AC026191.1--SRGAP3	114	2	114.0	2.0	ONLY_REF_SPLICE	AC026191.1^ENSG00000254485.5	chr3:9326010:-	SRGAP3^ENSG00000196220.16	chr3:9124917:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:2804:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:31564:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:15724:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:3330:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:43634:2597,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:47259:16862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:49119:24849,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:9147:18698,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:8054:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:2440:20085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:39023:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46361:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:11517:29669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:21905:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:51660:13807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:15845:19538,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:14001:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:12205:5134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:10368:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:14729:27777,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:44702:4475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:4802:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:51166:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:49249:25550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:19421:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:24372:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:39751:13135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:42332:6983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:28587:10024,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:39727:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:7561:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2186:51247:24947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:24283:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16525:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:45576:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:15327:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:6291:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2306:41588:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:50131:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:37648:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:40212:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:3063:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:10312:1659,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2415:48391:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:18248:27315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:37575:21696,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:21937:21066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:49257:24807,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:14146:13989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2496:27131:2457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1115:37526:1827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1135:39444:12546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:51490:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1170:45066:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:26144:8987,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1191:29841:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:1849:5890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:38918:24022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:42073:15363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:18814:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:13248:12378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:29703:8707,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:47728:6549,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:26710:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:47695:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:33028:19370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:25553:2667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:35277:16932,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1335:26039:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:15570:12756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1403:36936:22579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:20780:18922,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:26014:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1419:28676:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:45325:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:46628:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:21047:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1461:19858:2275,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:22989:25017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:1437:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:7618:13247,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2124:50106:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:21233:13513,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:14195:26853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:43489:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:19874:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:35827:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:32543:2415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:42599:17619,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2243:8257:27693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:28999:3929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:13863:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:4948:19776,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:20141:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:29105:6969,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:39403:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:37882:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:3168:3550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2384:9834:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:5312:15251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:41167:19174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2470:1162:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:40948:4335,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:44791:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1165:5498:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:21629:10921,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:17657:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:38788:17296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:20683:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1249:4422:14186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1264:12577:10879,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1307:36240:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1335:35682:2331,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:19194:29039	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:18547:17016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2209:8588:1869	YES_LDAS	0.3925	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.04Mb]"",""NEIGHBORS[42903]""]"	chr3:9326010-chr3:9124917	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	116
ABLIM3--PTPRB	97	0	97.0	0.0	INCL_NON_REF_SPLICE	ABLIM3^ENSG00000173210.20	chr5:149251419:+	PTPRB^ENSG00000127329.16	chr12:70558894:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:8920:5078,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:10441:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:32405:6213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1133:40196:15643,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:24040:12182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:11889:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:35261:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:5975:8805,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11104:16259,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:1955:4615,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:30787:21514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:49103:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:23951:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:40220:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:14397:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:44524:13947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:14607:5316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:51530:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:43594:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:4568:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1319:47097:23896,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:27276:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:28870:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:7860:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:16533:6633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1371:28894:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:20465:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1418:41636:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42138:5302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46822:10472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:29719:1981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:34549:13317,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:7723:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:42696:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:44136:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:7763:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:9349:13135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:38157:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:4875:3704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:25917:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2203:51142:9688,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:11557:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:39686:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:50147:11523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:17439:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:10174:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2366:52048:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2383:11735:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:28166:28436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:30901:18992,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2460:7326:17759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:43262:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:12504:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:19510:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:22883:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:47566:18712,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:50414:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:2634:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:47412:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:12180:3074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1180:18936:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:37073:14382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:51328:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:14073:9772,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1278:36742:23756,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:43739:21220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1337:47631:17058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:15950:11565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:41749:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:5409:7488,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1389:17746:10668,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:5037:9141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:12561:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:9899:25718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:48699:4951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:7545:21416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1473:2036:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2125:11331:22677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:49645:26685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:43788:7908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:30059:10360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2213:2238:8553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:46417:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2248:41086:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:8103:24625,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2319:3362:19917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2326:2327:13527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:47639:21248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:48593:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:23425:28520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2436:24356:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:37073:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1174:39525:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:14429:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:13022:25886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:33506:16105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1345:27535:7502	.	NO_LDAS	0.3282	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr12]""]"	chr5:149251419-chr12:70558894	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	97
GDPD5--MAP6	90	12	90.0	12.0	ONLY_REF_SPLICE	GDPD5^ENSG00000158555.15	chr11:75477619:-	MAP6^ENSG00000171533.12	chr11:75608322:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:1785:2219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1119:2173:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:30310:12252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:37996:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:26217:6255,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:32648:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:30545:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:15416:18655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:13329:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:14106:21542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:46725:7278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:28627:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:48246:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:51587:12168,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:12787:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:1291:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:29056:15180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:13240:4349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46417:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:44354:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1484:19704:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:20287:8174,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:38902:11131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:26516:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:26119:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2216:29647:4937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:15635:7628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:26548:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:41968:15965,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:6809:13359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:19114:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:37834:29263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:46037:18501,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:49313:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:25197:14718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:39686:8511,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:1049:20281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:5474:16147,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:2141:17773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:40002:29431,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1220:42704:14214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:9745:15166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:1574:10066,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:24404:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:31386:6241,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1260:4042:3634,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:23838:2471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:22358:8595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35391:17044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:22956:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:51732:16343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1346:43756:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:13596:24611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:8111:11860,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:38441:22355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:48990:14620,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1380:50389:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1398:14955:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:47461:18249,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:14963:24765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2157:21921:6072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:28174:15895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2185:21864:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2194:10174:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:39832:10360,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2219:41466:3522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2229:46158:24681,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:27624:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:21977:25227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2308:44047:21388,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:33635:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2361:49152:21346,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2378:43764:4363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2401:33352:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:49168:25522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2443:15942:21108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2444:21621:1603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2458:35221:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2462:46652:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:4098:8188,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:19041:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:5401:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:1453:23672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:19664:9758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:26289:18459,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:49831:21626,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:36394:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:24194:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:2561:5666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1291:9050:11439	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:46336:28128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:29218:21654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:26880:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:20643:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:48238:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:44063:25928,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2116:9365:9604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2151:13669:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:47590:3228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2415:24582:1126,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2451:38991:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:13313:13191	YES_LDAS	0.3451	GT	1.9086	AG	1.9086	"[""INTRACHROMOSOMAL[chr11:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[60977]""]"	chr11:75477619-chr11:75608322	False			1		PASS	102
MMP24OS--IGH@-ext	70	0	68.26	0.0	INCL_NON_REF_SPLICE	MMP24OS^ENSG00000126005.17	chr20:35277774:-	IGH@-ext^IGH.g@-ext	chr14:105605894:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45956:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1145:5255:25129,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:13143:2359,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:31604:15363,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:23312:16582,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:49985:8469,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:33384:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:44508:17002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:13580:5722,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:28587:25493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:46992:16764,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:21387:15349,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:48504:19048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:32324:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:34015:6591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:27794:9155,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:38635:22663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:28805:1238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:46272:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:13758:18361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:50883:15293,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:7156:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:50252:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:49661:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:33530:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:10765:14606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:43011:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:45495:1448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:22819:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:48569:24429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:32114:10865,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2485:13766:6829,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:26249:15531,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:23231:18599,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:50398:20309,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:11468:7137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:43715:19636,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:47202:21052,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42607:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1316:3492:24737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1342:37712:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1349:24631:26376,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1351:49006:29305,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:27204:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1417:50478:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:47315:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2108:33425:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:25974:23938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:11436:22243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:32842:5008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:35957:26741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:39994:16245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:22762:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2223:51927:11888,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2244:2675:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:50228:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:11655:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:48771:25059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2431:25763:9085,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2473:47695:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1112:15659:27679,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:27778:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1150:7027:4517,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:7974:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:32947:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:19639:14844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:12925:8146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:30990:10122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:11493:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:39978:23812	.	NO_LDAS	0.2309	AG	1.2419	CC	1.5058	"[""INTERCHROMOSOMAL[chr20--chr14]""]"	chr20:35277774-chr14:105605894	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	70
SLC22A11--RNH1	60	0	60.0	0.0	INCL_NON_REF_SPLICE	SLC22A11^ENSG00000168065.16	chr11:64556383:+	RNH1^ENSG00000023191.17	chr11:502144:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1118:40552:7964,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:1582:9407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:19615:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:26411:10150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:47566:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:39298:28997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:39832:8202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:17083:4839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:50195:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1351:8289:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1357:16177:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:12051:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:38416:11551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:2327:25942,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:49322:13485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:1364:25451,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2104:8726:13961,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:23425:1729,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:35383:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:41620:24639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:25003:7544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:37858:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:36839:4503,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:8499:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2316:30472:3873,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2326:39282:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:31386:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:40220:24513,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:8313:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2408:29946:12854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:4786:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:11719:15194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:27487:8791,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:4495:22607,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:39864:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1290:48593:8917,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:6598:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:30957:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:8645:11299,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:20100:8973,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:45519:14130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:2885:9954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2117:7464:5106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2132:37397:13933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:41499:27427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:16064:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:25545:26138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:36272:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:26006:28590,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2268:7957:20589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2383:29606:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2396:9956:19566,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2438:38546:22677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:5708:5484,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2496:47202:19594,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:29736:3662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:31038:15194,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1161:19211:17156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:28368:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:14607:21682	.	NO_LDAS	0.203	GT	1.4566	AG	1.9329	"[""INTRACHROMOSOMAL[chr11:64.05Mb]""]"	chr11:64556383-chr11:502144	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	60
CHCHD10--AC005064.1	48	0	48.0	0.0	INCL_NON_REF_SPLICE	CHCHD10^ENSG00000250479.9	chr22:23767834:-	AC005064.1^ENSG00000234715.2	chr7:103446122:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:32737:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:38667:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:40787:15545,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:10603:17913,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1181:34307:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:8338:16652,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:20497:7642,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:26233:15615,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43230:7810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:30189:16610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1264:8880:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:28037:16329,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1287:20966:13751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:6558:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:25238:8567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1353:24089:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:49038:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:16306:26362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:27559:28562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:27802:27637,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:23345:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:27325:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2138:9988:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:47801:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2205:18377:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2265:11153:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:36297:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:6008:28506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:13960:4587,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:21508:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:50284:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:39678:20183,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1227:9211:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1230:46401:26811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:24857:9449,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:8362:11117,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:13920:26068,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:31548:28324,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:52177:1476,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1396:25254:29445,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:40325:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1458:1963:25031,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1490:14543:16077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:4657:20253,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2214:41151:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:50988:14914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:51482:5400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1243:43853:28226	.	NO_LDAS	0.1624	GT	1.6402	AG	1.1589	"[""INTERCHROMOSOMAL[chr22--chr7]""]"	chr22:23767834-chr7:103446122	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	48
AKAP12--MT-RNR1	38	0	38.0	0.0	INCL_NON_REF_SPLICE	AKAP12^ENSG00000131016.17	chr6:151351470:+	MT-RNR1^ENSG00000211459.2	chrM:1419:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:31426:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:9211:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:30245:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:33619:16834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:22115:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:38530:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:24057:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:5474:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2215:11032:13583,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2239:26872:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:44168:13723,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:17787:3452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2273:32786:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:11727:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:38036:11733,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:41151:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:12035:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:1688:20127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1204:37219:17072,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:7868:15419,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:45519:4685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:46215:27189,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:32122:18754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1412:3014:26741,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1447:34913:8062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:24437:12924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:32980:2443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:20206:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2190:13968:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:43586:8847,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2389:21629:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:36062:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2486:13734:3999,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:44459:13863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:14535:1995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:1825:1757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:49928:6969,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:8952:14802	.	YES_LDAS	0.1286	GT	1.6402	AG	1.8256	"[""INTERCHROMOSOMAL[chr6--chrM]""]"	chr6:151351470-chrM:1419	False			0	Does not meet inclusion criteria	FAIL	38
RPL17--RPL17P12	35	0	35.0	0.0	INCL_NON_REF_SPLICE	RPL17^ENSG00000265681.7	chr18:49491405:-	RPL17P12^ENSG00000230559.1	chr2:146194373:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:35156:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:20020:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:16848:4433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1290:25254:12014,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:32656:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:38174:5862,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:33708:24555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:33853:17492,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:31532:26222,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:8087:23728,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:4042:21710,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:30852:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:8823:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:21799:26152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2235:19890:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2289:31022:21976,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:37850:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:41240:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:4066:21192,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:36216:20827,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:12318:18641,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:49152:9940,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:19316:1308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1148:29428:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:51190:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:7076:24106,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:18296:23280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2235:41555:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2268:31443:4853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:51627:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:37753:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:10886:16301,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:40609:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1278:23652:17506,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1312:14171:2121	.	NO_LDAS	0.1184	GT	1.9219	AG	1.8892	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTERCHROMOSOMAL[chr18--chr2]""]"	chr18:49491405-chr2:146194373	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	35
SEPTIN7P14--PSPH	34	0	29.55	0.0	ONLY_REF_SPLICE	SEPTIN7P14^ENSG00000245958.6	chr4:119455133:+	PSPH^ENSG00000146733.14	chr7:56021231:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:40059:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:6331:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:11517:5260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:37478:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:11185:25395,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:9713:3957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2423:34800:17731,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:8427:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2120:14405:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2189:21913:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:33400:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:37858:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:50567:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:31718:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:28239:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:51846:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:13248:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:29865:9379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1232:14996:6717,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:21079:19636	.	YES_LDAS	0.1	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr7]""]"	chr4:119455133-chr7:56021231	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	34
BPTF--DCXR	33	0	16.5	0.0	INCL_NON_REF_SPLICE	BPTF^ENSG00000171634.18	chr17:67945620:+	DCXR^ENSG00000169738.8	chr17:82037080:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:27600:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:24048:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:27519:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:4301:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1418:12496:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:47752:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:35569:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:8289:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:5296:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:21896:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:31305:19496,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:46951:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:51692:20225	.	NO_LDAS	0.0558	GT	1.5628	AG	1.6049	"[""INTRACHROMOSOMAL[chr17:14.05Mb]""]"	chr17:67945620-chr17:82037080	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	33
BPTF--BSND	33	0	16.5	0.0	INCL_NON_REF_SPLICE	BPTF^ENSG00000171634.18	chr17:67945620:+	BSND^ENSG00000162399.9	chr1:55006997:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:27600:5736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:24429:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:30820:28408,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:16355:9660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1306:40576:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:32608:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1384:21079:7782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:36094:2429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:38076:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:6064:18796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43286:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:34557:2822,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:31483:2738,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:45608:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:40811:18417,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:39792:8048,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:24048:26460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:33109:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1190:10004:20379,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31273:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:3637:18403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:49346:5120,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:27519:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:4301:23532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1418:12496:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:47752:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2323:35569:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:8289:23770,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:5296:25507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:21896:20575,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:31305:19496,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:46951:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:51692:20225	.	NO_LDAS	0.0558	GT	1.5628	AG	1.4256	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:67945620-chr1:55006997	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	33
UMAD1--GLCCI1	31	0	31.0	0.0	ONLY_REF_SPLICE	UMAD1^ENSG00000219545.11	chr7:7801743:+	GLCCI1^ENSG00000106415.13	chr7:8003908:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:13103:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33991:4979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:13920:14354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:19704:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:23086:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1256:33748:23448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:6558:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:20384:5344,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2160:30351:23700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:13912:2794,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:37866:16904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:50737:29389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:25294:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:35423:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:42469:5904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:11331:12224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:33036:23139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:37227:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:24016:27806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:29250:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:1405:11089,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:37753:6927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2116:38546:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:16986:4727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:18766:22131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:40390:8525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:33053:3270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2415:24599:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:49629:18585,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:44993:16077,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1334:18782:5288	.	YES_LDAS	0.1049	GT	1.9656	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[776]""]"	chr7:7801743-chr7:8003908	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	31
FBXO25--SEPTIN14	29	0	29.0	0.0	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:39120:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1132:31710:21962,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:11986:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:21969:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1323:46166:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1353:50478:27651,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:26079:11425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:5676:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:16444:8665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2298:31435:20589,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:17115:27623,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:30464:13219,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:19591:1504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:39889:23069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:9066:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:16266:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:37235:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:26484:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:2286:13737,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:3184:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:12043:20351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:24234:15545,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2123:4907:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2351:19858:10963,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:39314:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2493:16476:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1186:22649:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:47890:6521,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:42720:26881	.	YES_LDAS	0.0981	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:435707-chr7:55796092	True		aih_curated_blacklist score(6)	0	aih_curated_blacklist score(6)	FAIL	29
NPM1--MT-RNR2	27	0	13.48	0.0	INCL_NON_REF_SPLICE	NPM1^ENSG00000181163.14	chr5:171391799:+	MT-RNR2^ENSG00000210082.2	chrM:1959:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:1089:19762,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1246:30658:9856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1259:47582:23868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:45859:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44451:3732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:19033:7740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:2480:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:21452:22159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:25100:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2385:48869:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:24736:4027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:34970:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:51441:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:43432:12140,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:33870:10711,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:21492:8693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:25561:3802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:36224:11649,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2179:17860:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:27713:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:39039:25213,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2385:39306:21248,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:31095:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:47679:4111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1233:50292:14045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1234:37526:27553,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:17552:20729	.	NO_LDAS	0.0456	GT	1.9656	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chrM]""]"	chr5:171391799-chrM:1959	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	27
ACTR5--RN7SKP231	26	0	26.0	0.0	INCL_NON_REF_SPLICE	ACTR5^ENSG00000101442.10	chr20:38756039:+	RN7SKP231^ENSG00000200151.1	chr8:91595092:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:50211:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1124:29169:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:28045:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:23061:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:49524:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1438:49669:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:4956:20463,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:10190:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2193:37114:14508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:32284:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:47825:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:37915:4629,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:3492:20841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:22212:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:38764:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:24145:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1485:29930:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:16962:4125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2127:6461:19258,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2216:36750:14130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2379:24008:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:1947:3985,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:3492:11509,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:42429:2864,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1209:7537:15265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:32114:6353	.	YES_LDAS	0.088	GT	1.5656	AG	1.9329	"[""INTERCHROMOSOMAL[chr20--chr8]""]"	chr20:38756039-chr8:91595092	False			0	Does not meet inclusion criteria	FAIL	26
SEPTIN14--AP006222.1	25	0	25.0	0.0	INCL_NON_REF_SPLICE	SEPTIN14^ENSG00000154997.9	chr7:55795924:-	AP006222.1^ENSG00000228463.10	chr1:289370:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:28619:13695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:14810:14101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:44451:6535,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:27915:6227,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:33764:11761,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2111:1720:12000,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:22875:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:20812:26572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:19243:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:40204:3130,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:10902:7978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:10481:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:8435:28226,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:48254:1434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:23862:6857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:42000:17002,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:13887:29235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1494:13159:25648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2215:37801:11972,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2381:12520:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2472:2416:11691,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:37267:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:27762:11509,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:20003:18221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1343:36467:7614	.	YES_LDAS	0.0846	GT	1.5546	AG	1.7968	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:55795924-chr1:289370	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	25
RN7SL702P--RN7SL4P	24	0	21.92	0.0	INCL_NON_REF_SPLICE	RN7SL702P^ENSG00000243980.3	chrY:12273695:+	RN7SL4P^ENSG00000263740.2	chr3:15738565:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15667:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:2497:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2207:25488:3480,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2275:26556:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51740:10697,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:31710:20421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:6178:8763,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:42081:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:19178:29655,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1471:39905:19931,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:40770:11958,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:27373:23252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:48464:7768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:4770:21486,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:30917:25578	.	YES_LDAS	0.0742	GT	1.8892	AG	1.7968	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrY--chr3]""]"	chrY:12273695-chr3:15738565	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	24
ARHGAP29-AS1--NME2	22	0	22.0	0.0	ONLY_REF_SPLICE	ARHGAP29-AS1^ENSG00000226835.3	chr1:94249519:+	NME2^ENSG00000243678.12	chr17:51169937:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:49136:5820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:50576:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:47574:10234,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:38586:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:3209:5022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:14996:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:50033:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:36968:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:37494:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:2027:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:5927:18277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:40997:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1250:13709:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:33951:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:6914:26040,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:46191:23420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2148:17940:8875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:30674:28156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2252:31459:4209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2358:21419:22411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:47186:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:42833:28674	.	YES_LDAS	0.0744	GT	1.8295	AG	1.5546	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:94249519-chr17:51169937	False			1		PASS	22
AC008740.1--CRYM-AS1	21	0	21.0	0.0	INCL_NON_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21338921:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:9187:17030,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:36847:28926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1251:24882:2401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:30262:14242,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:25998:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2180:34315:11397,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2247:49386:13009,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:38424:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:22277:22523,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:10150:13933,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:24000:10823,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:10247:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1297:44176:2752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1413:36467:15909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2220:42121:5946,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2245:22487:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:28506:19552,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:23684:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1153:30051:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:32333:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:3387:26264	.	YES_LDAS	0.071	GT	1.7232	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21338921	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	21
AC211476.4--CCDC146	20	1	4.0	0.1	ONLY_REF_SPLICE	AC211476.4^ENSG00000277125.1	chr7:73069531:+	CCDC146^ENSG00000135205.15	chr7:77236947:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:43780:25774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:30229:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:29226:24695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:51951:11313,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:26257:16974,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:50697:27581,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:36903:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:43861:25381,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:20748:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:19890:12981,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:5587:22621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:4333:15012,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:39565:24471,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:35649:5022,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:41604:20043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:39824:16007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:39007:14564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:44435:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:52137:14522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:3605:21374	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2147:9770:2962	YES_LDAS	0.0138	GT	1.4566	AG	1.9329	"[""INTRACHROMOSOMAL[chr7:4.05Mb]""]"	chr7:73069531-chr7:77236947	True		aih_curated_blacklist score(5)	0	aih_curated_blacklist score(5)	FAIL	21
NUPR2--PSPH	19	0	7.47	0.0	ONLY_REF_SPLICE	NUPR2^ENSG00000185290.4	chr7:56116015:-	PSPH^ENSG00000146733.14	chr7:56021231:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:41507:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:13014:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:19914:14116,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:24704:15937,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:37203:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1334:30221:7530,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:37915:19706,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:10910:15643,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:14882:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:48504:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2263:49540:4251,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:5716:11075,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:37858:13443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:50567:3592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:31718:3284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:6744:16638,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:51846:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:16217:17717	.	YES_LDAS	0.0253	GT	1.8892	AG	1.9656	"[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[63077]""]"	chr7:56116015-chr7:56021231	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	19
GOLGA6L17P--GOLGA2P6	19	0	7.82	0.0	INCL_NON_REF_SPLICE	GOLGA6L17P^ENSG00000277741.4	chr15:82521523:+	GOLGA2P6^ENSG00000241621.1	chr10:30370881:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:6161:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1343:22317:11663,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1396:7326:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:11655:19482,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:14680:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:40164:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1450:15886:28576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2118:48658:25536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:47526:24499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:5247:9674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:28830:5204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:18256:2695,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1247:49500:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:4398:20617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1386:11549:20281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:40156:20897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2460:40269:7109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:48132:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:31200:8833	.	YES_LDAS	0.0265	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr15--chr10]""]"	chr15:82521523-chr10:30370881	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	19
ZBED3-AS1--PDE8B	18	0	18.0	0.0	ONLY_REF_SPLICE	ZBED3-AS1^ENSG00000250802.7	chr5:77118521:+	PDE8B^ENSG00000113231.14	chr5:77311994:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:39395:17114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1129:39775:26236,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:20554:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:11218:18081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1394:2189:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:6623:1855,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2384:14624:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:43723:10935,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:47242:5988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:45835:27876,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1355:48043:5666,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:35706:5456,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:36628:8398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:1097:3046,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:43828:16890,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:37162:7334,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:39428:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:43570:19889	.	YES_LDAS	0.0609	GT	1.9329	AG	1.8256	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[43540]""]"	chr5:77118521-chr5:77311994	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	18
IGH@-ext--CREB3L2	18	0	18.0	0.0	INCL_NON_REF_SPLICE	IGH@-ext^IGH.g@-ext	chr14:105760805:-	CREB3L2^ENSG00000182158.15	chr7:137928171:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:49241:18810,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:29218:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:33214:10220,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:45171:7670,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2182:18660:26544,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:48060:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:27495:26432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:25456:11803,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:47752:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:2853:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:43416:27357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:12156:26993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1303:41223:4671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1348:43853:12700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1455:10619:10935,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2172:30561:14284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:3459:12938,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:17771:23041	.	NO_LDAS	0.0609	CC	1.4566	CC	1.9656	"[""INTERCHROMOSOMAL[chr14--chr7]""]"	chr14:105760805-chr7:137928171	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	18
HLA-C--MUC16	18	0	18.0	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269489:-	MUC16^ENSG00000181143.15	chr19:8848985:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:36159:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:34970:20211,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:48432:27693,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:48545:22901,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1268:27001:4055,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1417:7456:1336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:9729:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2201:49718:3382,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2226:36458:18894,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:31354:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:13693:7348,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:43481:21080,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:3920:24190,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2114:3338:11860,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2191:46903:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:14017:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2473:34137:27904,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1136:3993:1280	.	NO_LDAS	0.0609	GT	1.9656	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:31269489-chr19:8848985	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	18
PALLD--PPM1D	18	1	18.0	1.0	ONLY_REF_SPLICE	PALLD^ENSG00000129116.19	chr4:168711923:+	PPM1D^ENSG00000170836.12	chr17:60656599:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:6008:23854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:19680:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:40107:24485,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36701:12280,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:11824:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:39889:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:49847:10584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:49961:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:3322:22453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:32098:14788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1215:11177:10837,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:21290:1841,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:26225:18151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1319:46191:17815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:10991:17801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:21921:16273,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2457:40204:15881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:35285:6577	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:44435:13373	YES_LDAS	0.0643	GT	1.6895	AG	1.8323	"[""INTERCHROMOSOMAL[chr4--chr17]""]"	chr4:168711923-chr17:60656599	False			1		PASS	19
HLA-A--C12orf40	17	0	17.0	0.0	INCL_NON_REF_SPLICE	HLA-A^ENSG00000206503.13	chr6:29942951:+	C12orf40^ENSG00000180116.15	chr12:39716794:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1108:6170:27834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:30836:7390,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:28555:5008,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:39662:9169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1448:4026:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:43036:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1483:32438:17871,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:44993:15124,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:47631:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:37300:17380,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1435:9664:6171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:17940:11145,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:13742:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:46021:12112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:39808:12336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:50454:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:11104:7796	.	NO_LDAS	0.0575	AT	1.5656	AC	1.7056	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:29942951-chr12:39716794	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
MIR4713HG--GLDN	17	3	17.0	2.73	ONLY_REF_SPLICE	MIR4713HG^ENSG00000259240.1	chr15:51037681:+	GLDN^ENSG00000186417.14	chr15:51377449:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:25893:28142,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:32058:26797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:25990:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2206:10530:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:25448:9099,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:47671:10991,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2310:32405:25718,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2373:33441:3690,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:49030:22369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:18393:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:30051:8805,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:21702:25760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:46134:14578,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1263:48132:12798,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:16614:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:25901:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:2505:24765	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:47032:29529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:23765:9435	YES_LDAS	0.0667	GT	1.9656	AG	1.8892	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]"	chr15:51037681-chr15:51377449	False			1		PASS	20
RGSL1--MYOF	16	0	8.0	0.0	ONLY_REF_SPLICE	RGSL1^ENSG00000121446.20	chr1:182507266:+	MYOF^ENSG00000138119.17	chr10:93452141:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:20262:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:38190:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:3920:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:14219:26502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:47501:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:4972:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2168:43149:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:35326:29375,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:42615:16498	.	NO_LDAS	0.0271	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:182507266-chr10:93452141	False			0	Does not meet inclusion criteria	FAIL	16
IGL@-ext--ZNF562	16	0	16.0	0.0	INCL_NON_REF_SPLICE	IGL@-ext^IGL.g@-ext	chr22:22415614:+	ZNF562^ENSG00000171466.10	chr19:9660874:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:17924:12154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:44864:16357,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2156:7262:16526,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2327:12269:26881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2336:45956:16540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:14203:24877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:49516:1210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1137:35043:27287,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1385:19194:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:32786:18221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:3904:22929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1493:50333:18768,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2397:30237:17955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:30326:4797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2456:43610:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2457:41830:10711	.	NO_LDAS	0.0541	AC	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr22--chr19]""]"	chr22:22415614-chr19:9660874	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	16
DPY19L1P1--MYOF	16	0	8.0	0.0	ONLY_REF_SPLICE	DPY19L1P1^ENSG00000229358.3	chr7:32581572:-	MYOF^ENSG00000138119.17	chr10:93452141:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:16266:7824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:48650:3494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1145:20262:21920,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1169:38691:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:32964:11579,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:41321:7558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:32640:10038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:50980:3186,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:38190:29179,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:3920:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:14219:26502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:47501:1617,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2154:4972:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2168:43149:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:35326:29375,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1145:42615:16498	.	NO_LDAS	0.0271	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr7--chr10]""]"	chr7:32581572-chr10:93452141	False			0	Does not meet inclusion criteria	FAIL	16
CMTM8--CMTM7	16	0	16.0	0.0	ONLY_REF_SPLICE	CMTM8^ENSG00000170293.9	chr3:32239119:+	CMTM7^ENSG00000153551.14	chr3:32441840:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:20529:8062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:40325:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:14955:14550,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:16816:9730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:21209:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2408:25238:24260,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:35221:26839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1339:36839:6801,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1376:12407:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1474:31766:21528,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:24332:9127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2265:31378:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2335:36523:5358,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:49661:4461,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2412:45819:26951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:51118:4685	.	YES_LDAS	0.0541	GT	1.9656	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]"	chr3:32239119-chr3:32441840	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	16
AGAP5--AC022400.4	16	1	15.5	1.0	INCL_NON_REF_SPLICE	AGAP5^ENSG00000172650.14	chr10:73692043:-	AC022400.4^ENSG00000272140.2	chr10:73713332:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:28166:14059,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:46563:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1375:32899:18137,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1443:33764:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:24437:15783,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2136:46992:7123,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2184:48343:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:15101:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:24259:16960,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:49589:3887,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:20691:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1358:8451:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2182:29995:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:11274:10276,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:37915:2135,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:28449:3788	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:46199:10430	YES_LDAS	0.0558	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5854]""]"	chr10:73692043-chr10:73713332	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	17
ZNF625--AGRN	15	0	15.0	0.0	INCL_NON_REF_SPLICE	ZNF625^ENSG00000257591.6	chr19:12146098:-	AGRN^ENSG00000188157.15	chr1:1051746:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:32066:7446,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2102:3597:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:18984:17520,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:18766:17282,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2205:35649:13065,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:41110:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:16598:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2414:39792:11439,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:16233:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:5450:27455,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:28304:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2176:32600:21570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2194:30140:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2228:30318:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:42210:4671	.	NO_LDAS	0.0507	GT	1.8892	AG	1.7232	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:12146098-chr1:1051746	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	15
RBBP4--C1QBP	15	0	7.5	0.0	ONLY_REF_SPLICE	RBBP4^ENSG00000162521.19	chr1:32662337:+	C1QBP^ENSG00000108561.8	chr17:5434966:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:21120:11355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2369:44354:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:46385:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20772:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20804:23924	.	YES_LDAS	0.0254	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:32662337-chr17:5434966	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	15
CHSY1--AC090907.2	15	0	15.0	0.0	ONLY_REF_SPLICE	CHSY1^ENSG00000131873.7	chr15:101235082:-	AC090907.2^ENSG00000259755.1	chr15:101050779:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:31871:29025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:42825:12742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:36208:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1445:22835:18782,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:8580:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:12342:21402,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:33311:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:27082:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1163:39533:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1328:40139:13387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:35609:19833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2388:34816:25662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2470:22608:8104,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1241:4835:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:35819:27063	.	YES_LDAS	0.0507	GT	1.8323	AG	1.6402	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:0.09Mb]"",""NEIGHBORS[89661]""]"	chr15:101235082-chr15:101050779	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	15
AC015712.1--C1QBP	15	0	7.5	0.0	ONLY_REF_SPLICE	AC015712.1^ENSG00000232386.9	chr15:100855348:+	C1QBP^ENSG00000108561.8	chr17:5434966:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:46684:12952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1470:5797:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:36005:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:9559:18824,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:21120:11355,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:34460:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:33190:21836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:51692:6409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:31394:18053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:18256:18473,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:39112:27918,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2369:44354:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:46385:4139,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20772:23924,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:20804:23924	.	YES_LDAS	0.0254	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr17]""]"	chr15:100855348-chr17:5434966	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	15
PICALM--SYTL2	15	1	15.0	1.0	ONLY_REF_SPLICE	PICALM^ENSG00000073921.18	chr11:85974708:-	SYTL2^ENSG00000137501.17	chr11:85758114:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1191:33417:12084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:9365:8342,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:24647:5218,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:5069:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:19842:13793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:18620:1813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:29841:16315,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2161:29210:1294,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:10336:2990,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:30431:2149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:29736:1925,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1103:38400:15475,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:12221:10907,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:17657:12308,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1236:29598:24723	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:7407:13583	YES_LDAS	0.0541	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.15Mb]""]"	chr11:85974708-chr11:85758114	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	16
BUB3--LINC02641	14	1	14.0	1.0	ONLY_REF_SPLICE	BUB3^ENSG00000154473.18	chr10:123162828:+	LINC02641^ENSG00000230131.6	chr10:123361319:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1187:8459:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:7440:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:19154:18347,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:41248:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:13839:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2115:15287:19076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:45002:6703,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2484:4552:11187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:5708:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:14891:23434,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:38174:19034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2119:5830:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:49637:1196,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2159:25157:21010	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:4964:25550	YES_LDAS	0.0508	GT	1.1589	AG	1.5058	"[""INTRACHROMOSOMAL[chr10:0.19Mb]""]"	chr10:123162828-chr10:123361319	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	15
LDLRAD3--PRR5L	14	2	14.0	2.0	INCL_NON_REF_SPLICE	LDLRAD3^ENSG00000179241.13	chr11:36098461:+	PRR5L^ENSG00000135362.14	chr11:36296290:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:10336:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:43820:15391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:8160:12868,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:24979:3354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:47857:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1481:21953:2766,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:44451:1154,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2390:14308:9814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1101:12116:1673,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1259:25796:28114,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:31993:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:2853:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2363:16460:19398,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1152:11897:15419	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11841:16245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:1696:9463	YES_LDAS	0.0542	GT	1.9329	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[64152]""]"	chr11:36098461-chr11:36296290	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	16
SAMD5--SASH1	13	0	13.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	SASH1^ENSG00000111961.18	chr6:148390134:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:8815:9043,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29024:1869,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:21573:11215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1132:15578:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:2691:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1304:11582:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:4875:11916,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:1558:5470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2269:7650:29557,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2447:37640:28254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:35471:21780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1255:29145:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:35132:14466	.	YES_LDAS	0.044	GT	1.8295	AG	1.9219	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]"	chr6:147509387-chr6:148390134	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	13
RN7SL732P--RN7SL128P	13	0	8.44	0.0	INCL_NON_REF_SPLICE	RN7SL732P^ENSG00000264618.2	chrX:39786593:-	RN7SL128P^ENSG00000240869.3	chr6:20421837:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:18248:27792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:51595:14087,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:30075:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:37567:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:38805:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2278:9050:22004,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:14251:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685	.	YES_LDAS	0.0286	GT	1.8892	AG	1.7465	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chrX--chr6]""]"	chrX:39786593-chr6:20421837	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	13
CHST11--MME	13	0	13.0	0.0	INCL_NON_REF_SPLICE	CHST11^ENSG00000171310.11	chr12:104601991:+	MME^ENSG00000196549.13	chr3:155183570:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:7140:21808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:36418:24541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:2173:23966,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:12795:26727,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1498:41110:15573,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1124:25666:4994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:45123:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:38319:26657,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:42939:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:46644:2233,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2429:15740:21654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:28466:9337,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:43181:28044	.	NO_LDAS	0.044	GT	1.7056	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:104601991-chr3:155183570	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	13
BOLA2B--SMG1P2	13	1	13.0	0.57	INCL_NON_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548658:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1143:7359:28912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:6687:2808,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:36232:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:4770:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2332:7917:26432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14219:22131,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:8208:6143,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:2667:15853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:2513:28674,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2338:16840:22747,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:37381:27245,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:28457:11453,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1214:44557:29501	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493	YES_LDAS	0.0459	GT	1.9329	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548658	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	14
USP22--RHBDF2	12	0	12.0	0.0	INCL_NON_REF_SPLICE	USP22^ENSG00000124422.12	chr17:21002946:-	RHBDF2^ENSG00000129667.13	chr17:76493111:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:20327:27217,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:4374:8020,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:15141:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:41757:12462,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2428:34072:15601,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:22843:29081,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1297:22794:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1320:18127:4433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:28943:12602,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2301:33457:20757,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:33133:28296,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:27883:12336	.	NO_LDAS	0.0406	GT	0.9056	AG	1.2366	"[""INTRACHROMOSOMAL[chr17:55.43Mb]""]"	chr17:21002946-chr17:76493111	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	12
RPS3AP11--SEPTIN7	12	0	4.0	0.0	INCL_NON_REF_SPLICE	RPS3AP11^ENSG00000230116.1	chr1:42491744:+	SEPTIN7^ENSG00000122545.20	chr7:35832798:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:46830:10739,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:3354:4069,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:8216:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1443:28506:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:21007:17661,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:1623:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1130:14154:28156,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:46086:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:15069:13205,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1415:9527:22187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:43303:25031,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1248:3573:18824	.	NO_LDAS	0.0135	GT	1.9329	AG	1.7968	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:42491744-chr7:35832798	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	12
RBM14--RBM4	12	0	12.0	0.0	ONLY_REF_SPLICE	RBM14^ENSG00000239306.5	chr11:66617057:+	RBM4^ENSG00000173933.21	chr11:66639700:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:40503:6283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:15505:1406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:49467:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2261:26653:10514,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:51579:17563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:17496:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:7100:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:14980:24457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:2756:22060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1422:40843:13093,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:49969:22845,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2430:8912:7418	.	YES_LDAS	0.0406	GT	1.7465	AG	1.9086	"[""HGNC_GENEFAM"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[8733]""]"	chr11:66617057-chr11:66639700	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	12
PKNOX2--MEIS3	12	0	12.0	0.0	ONLY_REF_SPLICE	PKNOX2^ENSG00000165495.16	chr11:125385722:+	MEIS3^ENSG00000105419.18	chr19:47417350:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:44201:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1458:30973:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:15441:18193,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:20909:20996,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2444:32171:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1228:5975:18277,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:47105:11775,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1346:11137:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2105:9608:27399,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2291:36782:26208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2464:32381:25199,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2468:48658:9562	.	NO_LDAS	0.0406	GT	1.9656	AG	1.9656	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:125385722-chr19:47417350	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	12
HLA-L--HLA-V	12	0	12.0	0.0	ONLY_REF_SPLICE	HLA-L^ENSG00000243753.5	chr6:30259697:+	HLA-V^ENSG00000181126.13	chr6:29792437:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1162:19947:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:39581:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:39872:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:5466:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:3597:17128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:48893:21010,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1486:47186:14662,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2170:41232:13821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2194:20440:7796,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:3920:7263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:23304:26853,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2482:7569:12658	.	YES_LDAS	0.0406	GT	1.7056	AG	1.8323	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.46Mb]""]"	chr6:30259697-chr6:29792437	True	"pair|MHC complexes|HLA-V	HLA-L; pair|recurrent breakpoints"	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	12
UBE2Q2P1--GOLGA2P6	11	0	11.0	0.0	INCL_NON_REF_SPLICE	UBE2Q2P1^ENSG00000189136.9	chr15:84435875:-	GOLGA2P6^ENSG00000241621.1	chr10:30370881:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1111:40131:28478,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1348:24954:18978,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:41968:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2295:45123:9519,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:48375:22327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:42210:26642,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:9842:6787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2295:21905:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2332:10061:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2420:5749:16231,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1302:20667:1631	.	YES_LDAS	0.0372	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr15--chr10]""]"	chr15:84435875-chr10:30370881	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	11
ACTR3C--AC092681.1	11	0	11.0	0.0	INCL_NON_REF_SPLICE	ACTR3C^ENSG00000106526.10	chr7:150284753:-	AC092681.1^ENSG00000224016.2	chr7:149909705:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1354:43990:10108,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:5822:17366,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:21241:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:27535:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2278:18466:21584,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:21759:15797,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:25319:6185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:32980:11411,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:19275:11495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:4463:17591,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:36515:28941	.	YES_LDAS	0.0372	GT	1.9899	AG	1.9899	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.33Mb]""]"	chr7:150284753-chr7:149909705	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	11
TLK2--AC240565.1	10	0	3.03	0.0	ONLY_REF_SPLICE	TLK2^ENSG00000146872.18	chr17:62560126:+	AC240565.1^ENSG00000280136.2	chr17:106864:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:24372:1322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1341:49216:28856,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:32616:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:5781:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:24526:5428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:26783:28422,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:52056:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:10684:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:40390:8328,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:23571:8427	.	YES_LDAS	0.0103	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr17:62.34Mb]""]"	chr17:62560126-chr17:106864	False			1		PASS	10
FUS--CTNNA1	10	0	10.0	0.0	INCL_NON_REF_SPLICE	FUS^ENSG00000089280.19	chr16:31184352:+	CTNNA1^ENSG00000044115.21	chr5:138934073:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1278:16937:16694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:3031:5470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:7723:18669,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1333:17989:23195,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:32171:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:3783:1252,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:15942:20491,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:42558:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:29250:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1205:46458:15699	.	NO_LDAS	0.0338	GT	1.8062	AG	1.9899	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:31184352-chr5:138934073	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	10
AC215522.2--AL627309.5	10	0	10.0	0.0	ONLY_REF_SPLICE	AC215522.2^ENSG00000282572.2	chr7:20834:-	AL627309.5^ENSG00000241860.7	chr1:173862:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:37421:3438,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:10190:11817,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:15991:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:45325:25676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:12585:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:45770:21962,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:45471:24891,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:38441:14284,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2298:31750:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2359:18968:10374	.	YES_LDAS	0.0338	GT	1.6402	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:20834-chr1:173862	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
AC073107.1--PSPH	10	0	2.87	0.0	ONLY_REF_SPLICE	AC073107.1^ENSG00000272693.4	chr7:65770467:-	PSPH^ENSG00000146733.14	chr7:56021231:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:11210:13023,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2127:47501:26166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:3799:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:45244:23994,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:47930:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2230:11574:8076,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:48974:17843,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1131:28239:23041,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1227:13248:19580,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:16217:17717	.	YES_LDAS	0.0097	GT	1.9086	AG	1.9656	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:9.60Mb]""]"	chr7:65770467-chr7:56021231	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
AC008740.1--CRYM-AS1	10	0	10.0	0.0	ONLY_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21315884:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:23134:13667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1680:25830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1432:1502:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:49718:7838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:2327:8006,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2138:16266:25339,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:13580:7151,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:32438:23784,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:14017:18529,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2321:17989:1617	.	YES_LDAS	0.0338	GT	1.7232	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21315884	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
WDR27--AL135910.1	10	1	10.0	0.67	ONLY_REF_SPLICE	WDR27^ENSG00000184465.16	chr6:169582836:-	AL135910.1^ENSG00000272848.2	chr6:169430712:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1193:29372:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:10813:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:10926:8525,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2253:2246:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:24744:28058,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:37235:1771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:32365:6367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:42542:6815,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1156:35900:4839,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:3912:27848	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011	YES_LDAS	0.0361	GT	1.6729	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]"	chr6:169582836-chr6:169430712	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	11
AC073529.1--MID1	10	1	10.0	0.83	ONLY_REF_SPLICE	AC073529.1^ENSG00000234129.8	chrX:11055936:-	MID1^ENSG00000101871.16	chrX:10567603:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:33959:10332,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:4131:17605,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:48092:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:7828:5512,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2432:49847:25045,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:24445:6353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:24623:22074,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:33797:16133,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1223:30294:15951,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:28377:2177	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:9592:21962	YES_LDAS	0.0366	GT	1.9219	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]"	chrX:11055936-chrX:10567603	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	11
YAF2--RYBP	9	0	9.0	0.0	INCL_NON_REF_SPLICE	YAF2^ENSG00000015153.15	chr12:42238155:-	RYBP^ENSG00000163602.11	chr3:72446621:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:1607:28450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1467:39670:29221,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:32867:8413,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2202:30658:9267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:5344:20911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:17536:3606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2330:18353:17633,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:51053:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:9535:11635	.	YES_LDAS	0.0304	GT	1.5656	AG	1.4566	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:42238155-chr3:72446621	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
TMED3--MINAR1	9	0	9.0	0.0	ONLY_REF_SPLICE	TMED3^ENSG00000166557.14	chr15:79314005:+	MINAR1^ENSG00000169330.9	chr15:79456098:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:27673:16035,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:11396:19959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:31426:20435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:23061:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:47930:26180,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:32341:23812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:51894:16736,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:10012:29165,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:16355:1701	.	YES_LDAS	0.0304	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]"	chr15:79314005-chr15:79456098	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	9
GUSBP13--NAIP	9	0	1.5	0.0	ONLY_REF_SPLICE	GUSBP13^ENSG00000198237.8	chr5:69920867:+	NAIP^ENSG00000249437.8	chr5:71003857:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:8774:4097,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:28943:29613,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:39816:19748,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1104:21888:16414,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2175:26629:11677,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:23288:18445,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2450:5166:13429,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2476:35779:27021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2479:13119:6325	.	YES_LDAS	0.0051	GT	1.9329	AG	1.8295	"[""INTRACHROMOSOMAL[chr5:1.05Mb]""]"	chr5:69920867-chr5:71003857	False			1		PASS	9
ATAD3B--AC124947.1	9	0	9.0	0.0	ONLY_REF_SPLICE	ATAD3B^ENSG00000160072.20	chr1:1477350:+	AC124947.1^ENSG00000257252.6	chr12:93339736:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:30779:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:32648:17787,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1485:28627:13009,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:37648:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:39775:13765,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1428:16266:25732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:12245:12995,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:38683:2457,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:40325:10879	.	NO_LDAS	0.0304	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:1477350-chr12:93339736	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	9
BOLA2B--SMG1P2	9	1	3.2	0.14	ONLY_REF_SPLICE	BOLA2B^ENSG00000169627.9	chr16:30193358:-	SMG1P2^ENSG00000205534.6	chr16:29548762:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:2448:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:49127:29403,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1277:40261:7067,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1322:38182:12686,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:49394:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2430:24218:19160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:8629:23658,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:37437:19440,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2174:41256:24961	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1378:44654:6493	YES_LDAS	0.0113	GT	1.9329	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:0.60Mb]""]"	chr16:30193358-chr16:29548762	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	10
SLC7A5P1--SMG1	8	0	8.0	0.0	ONLY_REF_SPLICE	SLC7A5P1^ENSG00000260727.2	chr16:29613103:-	SMG1^ENSG00000157106.17	chr16:18900044:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:50996:21178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:11315:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:46684:19118,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1387:37235:10654,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2304:2998:15307,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:9422:26040,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2353:37413:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2422:41118:22985	.	YES_LDAS	0.0271	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:10.69Mb]""]"	chr16:29613103-chr16:18900044	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
SAMD5--AL033504.1	8	0	8.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	AL033504.1^ENSG00000227681.5	chr6:147947472:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:2052:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:42793:10500,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:36313:12812,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:48901:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1443:23911:24569,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1451:35844:14326,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2495:48658:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:1785:3816	.	YES_LDAS	0.0271	GT	1.8295	AG	1.5058	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"	chr6:147509387-chr6:147947472	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
RN7SL564P--RN7SL128P	8	0	1.41	0.0	INCL_NON_REF_SPLICE	RN7SL564P^ENSG00000240606.3	chr6:122745488:+	RN7SL128P^ENSG00000240869.3	chr6:20421837:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:38254:25423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2222:18329:20701,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2241:23385:6479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:8944:22635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:7901:16428,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:38805:23125,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:9236:15685	.	YES_LDAS	0.0048	GT	1.8892	AG	1.7465	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:102.32Mb]""]"	chr6:122745488-chr6:20421837	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	8
PLEC--NUTM2F	8	0	1.6	0.0	INCL_NON_REF_SPLICE	PLEC^ENSG00000178209.16	chr8:143925564:-	NUTM2F^ENSG00000130950.14	chr9:94325374:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887	.	NO_LDAS	0.0054	GT	1.7465	AG	1.4295	"[""INTERCHROMOSOMAL[chr8--chr9]""]"	chr8:143925564-chr9:94325374	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	8
PLEC--IMPDH2	8	0	1.6	0.0	INCL_NON_REF_SPLICE	PLEC^ENSG00000178209.16	chr8:143925564:-	IMPDH2^ENSG00000178035.13	chr3:49027844:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887	.	NO_LDAS	0.0054	GT	1.7465	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chr3]""]"	chr8:143925564-chr3:49027844	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	8
PLEC--CRX	8	0	1.6	0.0	INCL_NON_REF_SPLICE	PLEC^ENSG00000178209.16	chr8:143925564:-	CRX^ENSG00000105392.16	chr19:47839401:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887	.	NO_LDAS	0.0054	GT	1.7465	AG	1.6895	"[""INTERCHROMOSOMAL[chr8--chr19]""]"	chr8:143925564-chr19:47839401	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	8
PLEC--AC109361.1	8	0	1.6	0.0	INCL_NON_REF_SPLICE	PLEC^ENSG00000178209.16	chr8:143925564:-	AC109361.1^ENSG00000249635.1	chr4:106020963:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:10328:19062,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:13645:8441,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:20020:28758,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:27511:28730,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2343:49936:4713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2140:36005:23013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2334:13750:23027,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:36256:22887	.	NO_LDAS	0.0054	GT	1.7465	AG	1.6895	"[""INTERCHROMOSOMAL[chr8--chr4]""]"	chr8:143925564-chr4:106020963	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	8
PKD1P2--NPIPB12	8	0	1.15	0.0	ONLY_REF_SPLICE	PKD1P2^ENSG00000227827.3	chr16:16377056:+	NPIPB12^ENSG00000169203.16	chr16:29500083:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:20230:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:28741:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2150:19898:19272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:14963:29361,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:4576:9547,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:49969:26124,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:9859:6311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:33231:21906	.	YES_LDAS	0.0039	GT	1.8323	AG	1.9899	"[""INTRACHROMOSOMAL[chr16:13.11Mb]""]"	chr16:16377056-chr16:29500083	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
KLF7--KLF6	8	0	8.0	0.0	ONLY_REF_SPLICE	KLF7^ENSG00000118263.15	chr2:207088458:-	KLF6^ENSG00000067082.15	chr10:3779590:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:1955:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:4681:14886,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:3095:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:17107:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1339:11274:27119,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1433:49500:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2333:25869:9576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:1971:5148	.	YES_LDAS	0.0271	GT	1.7819	AG	1.7465	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr2--chr10]""]"	chr2:207088458-chr10:3779590	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	8
FBXO31--C16orf95	8	0	8.0	0.0	ONLY_REF_SPLICE	FBXO31^ENSG00000103264.18	chr16:87333886:-	C16orf95^ENSG00000260456.7	chr16:87315823:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37809:23392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1297:35738:3859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2268:38141:12588,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:38772:3508,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:26306:25970,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:19866:1645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:26079:13303,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:42170:8020	.	YES_LDAS	0.0271	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[9567]""]"	chr16:87333886-chr16:87315823	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
EIF4E3--FOXP1	8	0	8.0	0.0	ONLY_REF_SPLICE	EIF4E3^ENSG00000163412.13	chr3:71690010:-	FOXP1^ENSG00000114861.23	chr3:71493555:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:12561:2051,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:47598:17899,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:31176:29053,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2419:17811:4923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:38473:28100,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1392:36378:6507,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:6720:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:49435:11019	.	YES_LDAS	0.0271	GT	1.7056	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr3:0.09Mb]"",""NEIGHBORS[91425]""]"	chr3:71690010-chr3:71493555	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	8
CPSF6--GRM8	8	0	8.0	0.0	INCL_NON_REF_SPLICE	CPSF6^ENSG00000111605.18	chr12:69262562:+	GRM8^ENSG00000179603.18	chr7:126445313:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1131:42866:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:30771:20645,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1456:31273:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:46361:25115,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:40439:14466,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6234:16680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2156:3791:17885,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2253:19049:26741	.	NO_LDAS	0.0271	GT	1.9899	AG	1.8256	"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTERCHROMOSOMAL[chr12--chr7]""]"	chr12:69262562-chr7:126445313	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	8
CFAP74--ST7	8	0	8.0	0.0	INCL_NON_REF_SPLICE	CFAP74^ENSG00000142609.18	chr1:1922177:-	ST7^ENSG00000004866.22	chr7:117119693:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1195:16832:29291,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:17665:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1388:11396:22201,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2245:38287:26769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:24696:17745,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:21735:24611,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:30108:24709,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:11954:12098	.	NO_LDAS	0.0271	AT	1.8295	AC	1.9656	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:1922177-chr7:117119693	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	8
TVP23C--CDRT4	8	1	8.0	1.0	INCL_NON_REF_SPLICE	TVP23C^ENSG00000175106.17	chr17:15503098:-	CDRT4^ENSG00000239704.11	chr17:15440285:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1398:8030:24919,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:47873:12042,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:6404:25465,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:16606:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1265:8993:23223,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2327:26686:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:25424:10178,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:38902:21976	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:11412:25564	YES_LDAS	0.0305	GT	1.9329	AG	1.9899	"[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]"	chr17:15503098-chr17:15440285	False			0	Does not meet inclusion criteria	FAIL	9
AC211476.4--CCDC146	8	1	2.67	0.07	ONLY_REF_SPLICE	AC211476.4^ENSG00000277125.1	chr7:73072670:+	CCDC146^ENSG00000135205.15	chr7:77236947:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1135:7553:5792,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:32130:1112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:6542:22957,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:44985:28450,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:45956:14298,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1188:20675:22383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:36628:16750,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1498:40698:5134	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2147:9770:2962	YES_LDAS	0.0092	GT	1.8323	AG	1.9329	"[""INTRACHROMOSOMAL[chr7:4.05Mb]""]"	chr7:73072670-chr7:77236947	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	9
RMND5A--ANAPC1P2	7	0	7.0	0.0	ONLY_REF_SPLICE	RMND5A^ENSG00000153561.13	chr2:86741069:+	ANAPC1P2^ENSG00000231259.5	chr2:87052992:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1307:10894:8973,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:15813:15026,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:40649:8833,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:3330:29333,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:32147:28016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:27244:10949,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:36992:15391	.	YES_LDAS	0.0237	GT	1.8295	AG	1.9086	"[""INTRACHROMOSOMAL[chr2:0.25Mb]""]"	chr2:86741069-chr2:87052992	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	7
RIMKLA--CAMSAP1	7	0	7.0	0.0	INCL_NON_REF_SPLICE	RIMKLA^ENSG00000177181.15	chr1:42419655:+	CAMSAP1^ENSG00000130559.19	chr9:135883078:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:6768:14774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:5894:9421,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:49783:10136,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:34218:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1439:20554:11467,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:14696:12364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:41450:23924	.	NO_LDAS	0.0237	GT	1.9899	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr9]""]"	chr1:42419655-chr9:135883078	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	7
OR51M1--ABR	7	0	7.0	0.0	INCL_NON_REF_SPLICE	OR51M1^ENSG00000184698.5	chr11:5392729:+	ABR^ENSG00000159842.15	chr17:1100735:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:4018:14494,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1389:22212:26614,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2281:43222:14270,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:19397:12714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1183:48585:12322,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:28522:20813,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1307:49839:18501	.	YES_LDAS	0.0237	GT	1.9656	AG	1.5628	"[""INTERCHROMOSOMAL[chr11--chr17]""]"	chr11:5392729-chr17:1100735	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	7
EIF1AXP1--PDE4DIPP9	7	0	7.0	0.0	INCL_NON_REF_SPLICE	EIF1AXP1^ENSG00000236698.1	chr1:16686040:-	PDE4DIPP9^ENSG00000230239.1	chr1:16859049:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1291:6299:20771,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:13548:17436,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2470:20885:25409,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:47081:25998,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:11849:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2152:48820:24751,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:5757:4755	.	YES_LDAS	0.0237	GT	1.8295	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.17Mb]""]"	chr1:16686040-chr1:16859049	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	7
CCDC74A--PTPN12	7	0	7.0	0.0	ONLY_REF_SPLICE	CCDC74A^ENSG00000163040.15	chr2:131528627:+	PTPN12^ENSG00000127947.16	chr7:77585543:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:16371:28604,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42752:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:34711:21640,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:25966:23672,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2457:46700:20267,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:43691:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1119:40148:11551	.	YES_LDAS	0.0237	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr7]""]"	chr2:131528627-chr7:77585543	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	7
BICD2--EEF1DP2	7	0	7.0	0.0	INCL_NON_REF_SPLICE	BICD2^ENSG00000185963.14	chr9:92764505:-	EEF1DP2^ENSG00000226721.2	chr9:92837729:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:19429:22215,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2214:21791:22859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:5854:15769,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2292:18758:23238,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2437:48092:19650,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:31038:12112,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1134:14664:11635	.	YES_LDAS	0.0237	GT	1.7819	AG	1.5058	"[""INTRACHROMOSOMAL[chr9:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[71993]""]"	chr9:92764505-chr9:92837729	False			0	Read count too low: 7 < 8	FAIL	7
MIR4713HG--GLDN	7	1	7.0	0.27	ONLY_REF_SPLICE	MIR4713HG^ENSG00000259240.1	chr15:51037681:+	GLDN^ENSG00000186417.14	chr15:51383785:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:1283:25564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:40698:1631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1147:30456:20603,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:7205:6955,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1329:27559:1883,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2255:25092:11369,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:4762:12280	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1159:46547:26586	YES_LDAS	0.0246	GT	1.9656	AG	1.7056	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr15:0.05Mb]"",""NEIGHBORS[47743]""]"	chr15:51037681-chr15:51383785	False			1		PASS	8
TLK2P1--AC110079.1	6	0	3.9	0.0	INCL_NON_REF_SPLICE	TLK2P1^ENSG00000226049.3	chr17:34039043:-	AC110079.1^ENSG00000260404.3	chr4:118595912:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:12431:24443,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1106:20117:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1326:52056:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:50940:11327,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1401:10684:8721,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:40390:8328	.	YES_LDAS	0.0132	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:34039043-chr4:118595912	False			0	Read count too low: 6 < 8	FAIL	6
RPL23AP53--SEPTIN14	6	0	6.0	0.0	ONLY_REF_SPLICE	RPL23AP53^ENSG00000223508.5	chr8:232129:-	SEPTIN14^ENSG00000154997.9	chr7:55796092:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1187:8524:9127,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1435:31750:13877,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:36280:16820,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:25553:7572,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2459:52048:15713,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1141:32203:17913	.	YES_LDAS	0.0203	GT	1.9086	AG	1.9899	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:232129-chr7:55796092	True		aih_curated_blacklist score(5)	0	aih_curated_blacklist score(5)	FAIL	6
RN7SL828P--RN7SL4P	6	0	1.47	0.0	INCL_NON_REF_SPLICE	RN7SL828P^ENSG00000272075.2	chr11:118067471:+	RN7SL4P^ENSG00000263740.2	chr3:15738565:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1253:35043:23336,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2392:25966:27988,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2471:9867:18880,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:16468:1084,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:47906:28660,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1126:26249:29235	.	NO_LDAS	0.005	GT	1.8892	AG	1.7968	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:118067471-chr3:15738565	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	6
RBM14--C11orf80	6	0	6.0	0.0	ONLY_REF_SPLICE	RBM14^ENSG00000239306.5	chr11:66617057:+	C11orf80^ENSG00000173715.18	chr11:66759043:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:12512:11383,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:39492:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:25861:15166,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:33222:15138,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:40180:10290,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1142:8321:18389	.	YES_LDAS	0.0203	GT	1.7465	AG	1.9656	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.11Mb]""]"	chr11:66617057-chr11:66759043	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
PCGF6--MNX1	6	0	3.0	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	MNX1^ENSG00000130675.15	chr7:157005174:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:51352:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:26362:26152	.	NO_LDAS	0.0101	GT	1.2419	AG	1.231	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:103350983-chr7:157005174	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
PCGF6--C10orf99	6	0	3.0	0.0	INCL_NON_REF_SPLICE	PCGF6^ENSG00000156374.16	chr10:103350983:-	C10orf99^ENSG00000188373.5	chr10:84184831:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:14365:14228,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:14446:24316,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:28555:3943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1196:41086:2780,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:51352:18740,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:26362:26152	.	NO_LDAS	0.0101	GT	1.2419	AG	1.231	"[""INTRACHROMOSOMAL[chr10:19.12Mb]""]"	chr10:103350983-chr10:84184831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
PAXBP1--GOLGA8A	6	0	6.0	0.0	INCL_NON_REF_SPLICE	PAXBP1^ENSG00000159086.15	chr21:32771321:-	GOLGA8A^ENSG00000175265.17	chr15:34381856:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:49224:2387,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:7076:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2257:40795:27385,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:20359:9477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1246:22285:19538,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:3637:3354	.	NO_LDAS	0.0203	GT	1.2867	AG	1.8295	"[""INTERCHROMOSOMAL[chr21--chr15]""]"	chr21:32771321-chr15:34381856	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
NPM1--NMD3P2	6	0	6.0	0.0	INCL_NON_REF_SPLICE	NPM1^ENSG00000181163.14	chr5:171392978:+	NMD3P2^ENSG00000231504.1	chr7:56502379:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1397:41790:14340,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:44346:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1271:26419:12406,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2303:17229:15993,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:21694:22018,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:34282:12798	.	NO_LDAS	0.0203	GT	1.5219	AG	1.7819	"[""INTERCHROMOSOMAL[chr5--chr7]""]"	chr5:171392978-chr7:56502379	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	6
NONO--KAT6A	6	0	6.0	0.0	INCL_NON_REF_SPLICE	NONO^ENSG00000147140.17	chrX:71290778:+	KAT6A^ENSG00000083168.11	chr8:41933275:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:43141:25311,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:49273:3396,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:19987:23209,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:33036:18571,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:46458:21948,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:51643:23588	.	NO_LDAS	0.0203	GC	1.7819	AG	1.4566	"[""INTERCHROMOSOMAL[chrX--chr8]""]"	chrX:71290778-chr8:41933275	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	6
NME2--NME1	6	0	6.0	0.0	ONLY_REF_SPLICE	NME2^ENSG00000243678.12	chr17:51168343:+	NME1^ENSG00000239672.8	chr17:51161160:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1110:21427:20295,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:41296:24415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1156:41232:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:7480:2415,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1196:43157:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1298:37259:13135	.	YES_LDAS	0.0203	GT	1.8062	AG	1.5546	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3007]""]"	chr17:51168343-chr17:51161160	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
MT-ND6--MTRNR2L12	6	0	3.0	0.0	INCL_NON_REF_SPLICE	MT-ND6^ENSG00000198695.2	chrM:14150:-	MTRNR2L12^ENSG00000269028.3	chr3:96617452:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:33311:20393,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2243:45414:7502,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1457:30391:25704,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2185:41668:23826,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:17075:10374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:38869:18810	.	YES_LDAS	0.0101	GT	1.8295	AG	1.2419	"[""INTERCHROMOSOMAL[chrM--chr3]""]"	chrM:14150-chr3:96617452	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	6
HLA-C--NUMA1	6	0	6.0	0.0	INCL_NON_REF_SPLICE	HLA-C^ENSG00000204525.17	chr6:31269493:-	NUMA1^ENSG00000137497.18	chr11:72013673:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1344:41507:5386,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:30148:3760,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:4673:17983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2443:36475:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:32292:3830,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:22293:28660	.	NO_LDAS	0.0203	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:31269493-chr11:72013673	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
EIF3C--NPIPB13	6	0	6.0	0.0	INCL_NON_REF_SPLICE	EIF3C^ENSG00000184110.15	chr16:28735582:+	NPIPB13^ENSG00000198064.13	chr16:30245853:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:37526:26909,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:5983:28044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:32769:12504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2159:43044:17240,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:42097:8370,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1319:29210:29347	.	YES_LDAS	0.0203	GT	1.9086	AG	1.9329	"[""INTRACHROMOSOMAL[chr16:1.49Mb]""]"	chr16:28735582-chr16:30245853	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
BNIP3L--DPYSL2	6	0	6.0	0.0	ONLY_REF_SPLICE	BNIP3L^ENSG00000104765.16	chr8:26408376:+	DPYSL2^ENSG00000092964.18	chr8:26581969:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:31467:15208,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:34258:24134,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:25586:21304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2410:3136:21374,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1203:11946:25788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1226:16670:6030	.	YES_LDAS	0.0203	GT	1.6402	AG	1.9329	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[8395]""]"	chr8:26408376-chr8:26581969	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	6
AC233699.1--TBC1D3	6	0	0.22	0.0	ONLY_REF_SPLICE	AC233699.1^ENSG00000261499.2	chr17:36320547:+	TBC1D3^ENSG00000274611.3	chr17:38191030:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:33894:14452,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:23733:3606,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:29485:7095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2191:6453:17927,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1495:22762:8595,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1302:12771:27609	.	YES_LDAS	0.0007	GT	1.9329	AG	1.7465	"[""INTRACHROMOSOMAL[chr17:1.86Mb]""]"	chr17:36320547-chr17:38191030	False			0	Read count too low: 6 < 8	FAIL	6
PKD1--NPIPA3	6	1	4.96	0.83	ONLY_REF_SPLICE	PKD1^ENSG00000008710.20	chr16:2097868:-	NPIPA3^ENSG00000224712.12	chr16:14716068:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:32381:5694,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1360:25723:25802,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2379:29315:10556,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1255:5005:12448,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:40568:19202,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:2222:3480	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:40188:14228	YES_LDAS	0.0196	GT	1.8323	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:12.57Mb]""]"	chr16:2097868-chr16:14716068	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	7
LINC00511--SLC39A11	6	1	6.0	1.0	ONLY_REF_SPLICE	LINC00511^ENSG00000227036.8	chr17:72592203:-	SLC39A11^ENSG00000133195.11	chr17:72649268:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:30771:6997,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2342:7788:21444,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:23660:12840,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2242:23798:21038,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:11525:13681,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1228:38182:21178	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:3136:22747	YES_LDAS	0.0237	GT	1.8892	AG	1.9086	"[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]"	chr17:72592203-chr17:72649268	False			0	Read count too low: 7 < 8	FAIL	7
SLC7A5--SMG1P1	6	5	3.0	1.36	ONLY_REF_SPLICE	SLC7A5^ENSG00000103257.9	chr16:87868885:-	SMG1P1^ENSG00000237296.9	chr16:22454702:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:24340:4265,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:32349:27105,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1144:1251:20631,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1404:44249:27567,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:13637:24401,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:50033:1238	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2395:36669:28030	YES_LDAS	0.0147	GT	1.5301	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]"	chr16:87868885-chr16:22454702	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	11
SSBP1--MGAM	5	0	5.0	0.0	ONLY_REF_SPLICE	SSBP1^ENSG00000106028.11	chr7:141750384:+	MGAM^ENSG00000257335.8	chr7:142005529:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:12908:26979,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:18337:13345,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:42008:12532,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:5045:26082,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2438:16233:22537	.	YES_LDAS	0.0169	GT	1.8295	AG	1.5329	"[""INTRACHROMOSOMAL[chr7:0.12Mb]""]"	chr7:141750384-chr7:142005529	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	5
RN7SL303P--RN7SL4P	5	0	2.38	0.0	INCL_NON_REF_SPLICE	RN7SL303P^ENSG00000240116.3	chr8:22978059:+	RN7SL4P^ENSG00000263740.2	chr3:15738565:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:11590:4013,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2158:49297:14312,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:22916:1883,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1126:26249:29235,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:11234:2359	.	NO_LDAS	0.0081	GT	1.8892	AG	1.7968	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr8--chr3]""]"	chr8:22978059-chr3:15738565	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	5
RAB38--AP000676.5	5	0	5.0	0.0	ONLY_REF_SPLICE	RAB38^ENSG00000123892.12	chr11:88149675:-	AP000676.5^ENSG00000285835.1	chr11:87954906:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:36628:14368,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:9899:8959,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2441:24162:9533,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:36135:22285,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:49346:18768	.	YES_LDAS	0.0169	GT	1.6729	AG	1.6402	"[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]"	chr11:88149675-chr11:87954906	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	5
PINX1--RP1L1	5	0	5.0	0.0	ONLY_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10826152:-	RP1L1^ENSG00000183638.6	chr8:10623220:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:13475:25185,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1232:29776:21164,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1419:12415:22229,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2264:24849:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1243:42866:26012	.	YES_LDAS	0.0169	GT	1.7232	AG	1.4566	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10826152-chr8:10623220	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	5
LINC02210--CRHR1	5	0	5.0	0.0	ONLY_REF_SPLICE	LINC02210^ENSG00000204650.14	chr17:45630158:+	CRHR1^ENSG00000120088.15	chr17:45807010:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1295:1218:8497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46183:3564,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2255:43780:6689,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2495:42833:22621,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:23830:19048	.	YES_LDAS	0.0169	GT	1.8323	AG	1.4295	"[""INTRACHROMOSOMAL[chr17:0.13Mb]""]"	chr17:45630158-chr17:45807010	False			0	Read count too low: 5 < 8	FAIL	5
HIGD1A--HIGD1AP4	5	0	5.0	0.0	INCL_NON_REF_SPLICE	HIGD1A^ENSG00000181061.14	chr3:42785252:-	HIGD1AP4^ENSG00000233299.1	chr2:223398338:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:8629:3648,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:47590:3536,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:16816:4881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:26225:14788,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:34768:16498	.	YES_LDAS	0.0169	GT	1.9086	AG	1.8323	"[""INTERCHROMOSOMAL[chr3--chr2]""]"	chr3:42785252-chr2:223398338	False			0	Read count too low: 5 < 8	FAIL	5
EXOC4--LRGUK	5	0	5.0	0.0	ONLY_REF_SPLICE	EXOC4^ENSG00000131558.15	chr7:134007835:+	LRGUK^ENSG00000155530.3	chr7:134163397:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:1162:11257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:12739:16596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:6210:26558,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1213:42041:9926,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:21799:1631	.	YES_LDAS	0.0169	GT	1.9899	AG	1.8295	"[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]"	chr7:134007835-chr7:134163397	False			0	Read count too low: 5 < 8	FAIL	5
ESRRB--AC016526.2	5	0	5.0	0.0	ONLY_REF_SPLICE	ESRRB^ENSG00000119715.15	chr14:76310916:+	AC016526.2^ENSG00000258454.1	chr14:76252051:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:23045:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1455:3111:13541,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:43659:4181,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:11574:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:38958:9940	.	YES_LDAS	0.0169	GT	1.7465	AG	1.6895	"[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""LOCAL_REARRANGEMENT:+:[47238]""]"	chr14:76310916-chr14:76252051	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	5
CNTNAP3C--BX005040.4	5	0	5.0	0.0	INCL_NON_REF_SPLICE	CNTNAP3C^ENSG00000283378.1	chr9:61453030:+	BX005040.4^ENSG00000283541.1	chr9:61097036:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:41377:12616,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:48901:11159,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:30941:14017,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1273:5369:6353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1193:29501:7011	.	YES_LDAS	0.0169	GT	1.8295	AG	1.8323	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61453030-chr9:61097036	False			0	Read count too low: 5 < 8	FAIL	5
AC091057.4--AC091057.6	5	0	5.0	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	AC091057.6^ENSG00000285035.1	chr15:30716220:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2167:21549:4167,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:39290:28870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:7723:24050,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:20092:9912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2187:44694:10290	.	YES_LDAS	0.0169	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26911]""]"	chr15:30750556-chr15:30716220	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	5
CA13--CA3	5	1	5.0	0.83	INCL_NON_REF_SPLICE	CA13^ENSG00000185015.8	chr8:85281639:+	CA3^ENSG00000164879.7	chr8:85439712:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1116:1615:20057,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1177:48780:12854,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:30787:9435,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1318:17617:18908,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1488:12083:23027	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2138:16023:10150	YES_LDAS	0.0197	GT	1.7968	AG	1.8892	"[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]"	chr8:85281639-chr8:85439712	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	6
AC114763.1--NXPH2	5	1	5.0	0.83	ONLY_REF_SPLICE	AC114763.1^ENSG00000228043.5	chr2:138500755:-	NXPH2^ENSG00000144227.5	chr2:138671665:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:37413:25171,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:38756:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:41499:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1403:44540:10416,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:17415:9141	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2221:32527:10682	YES_LDAS	0.0197	GT	1.8892	AG	1.8295	"[""INTRACHROMOSOMAL[chr2:0.17Mb]""]"	chr2:138500755-chr2:138671665	False			0	Read count too low: 6 < 8	FAIL	6
SLC7A5--SMG1P1	5	5	2.5	1.14	ONLY_REF_SPLICE	SLC7A5^ENSG00000103257.9	chr16:87868885:-	SMG1P1^ENSG00000237296.9	chr16:22451620:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:38368:20407,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:23822:7460,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:37712:11789,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2348:18337:17857,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:44023:4391	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1184:9616:2836,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1494:47873:20197,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:15764:22425,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:49435:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2395:36669:28030	YES_LDAS	0.0124	GT	1.5301	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:65.34Mb]""]"	chr16:87868885-chr16:22451620	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	10
TAS2R14--PRR4	4	0	4.0	0.0	ONLY_REF_SPLICE	TAS2R14^ENSG00000212127.6	chr12:11034782:-	PRR4^ENSG00000111215.12	chr12:10848407:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:34590:9576,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1378:24299:6773,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2397:25480:22495,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1148:39047:14914	.	YES_LDAS	0.0135	GT	1.6402	AG	1.8062	"[""INTRACHROMOSOMAL[chr12:0.09Mb]"",""NEIGHBORS[87933]""]"	chr12:11034782-chr12:10848407	False			0	Read count too low: 4 < 8	FAIL	4
SYN2--PPARG	4	0	4.0	0.0	ONLY_REF_SPLICE	SYN2^ENSG00000157152.17	chr3:12183372:+	PPARG^ENSG00000132170.23	chr3:12379704:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:44904:23742,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:50300:2261,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:47501:29109,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1150:29226:10206	.	YES_LDAS	0.0135	GT	1.6729	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.10Mb]"",""NEIGHBORS[95336]""]"	chr3:12183372-chr3:12379704	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
SMIM13--STIL	4	0	2.0	0.0	ONLY_REF_SPLICE	SMIM13^ENSG00000224531.6	chr6:11094389:+	STIL^ENSG00000123473.16	chr1:47313156:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:40358:25367,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1172:47679:22831,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:35091:6016,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1110:4827:6815	.	NO_LDAS	0.0068	GT	1.6895	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:11094389-chr1:47313156	False			0	Read count too low: 4 < 8	FAIL	4
PPP1R7--PAEP	4	0	4.0	0.0	ONLY_REF_SPLICE	PPP1R7^ENSG00000115685.15	chr2:241169867:+	PAEP^ENSG00000122133.17	chr9:135566192:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:15505:7516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2277:14866:19524,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:9575:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:27737:11159	.	YES_LDAS	0.0135	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr9]""]"	chr2:241169867-chr9:135566192	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
LINC02728--GAB2	4	0	4.0	0.0	ONLY_REF_SPLICE	LINC02728^ENSG00000251323.3	chr11:78425337:-	GAB2^ENSG00000033327.13	chr11:78280901:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1227:29453:29515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:34541:18263,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2139:40406:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:29655:13079	.	YES_LDAS	0.0135	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[5634]""]"	chr11:78425337-chr11:78280901	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
INTS9-AS1--WDR37	4	0	4.0	0.0	ONLY_REF_SPLICE	INTS9-AS1^ENSG00000254034.2	chr8:28798641:+	WDR37^ENSG00000047056.16	chr10:1080011:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2117:42486:12210,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:28999:10542,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:19194:12644,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:24429:26250	.	YES_LDAS	0.0135	GT	1.9329	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTERCHROMOSOMAL[chr8--chr10]""]"	chr8:28798641-chr10:1080011	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
HULC--AGAP5	4	0	4.0	0.0	INCL_NON_REF_SPLICE	HULC^ENSG00000285219.2	chr6:8547214:+	AGAP5^ENSG00000172650.14	chr10:73697720:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:28757:11944,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:15505:25872,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:32478:19230,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1175:47784:14466	.	NO_LDAS	0.0135	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr6--chr10]""]"	chr6:8547214-chr10:73697720	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
GOLGA6L5P--GOLGA6B	4	0	0.41	0.0	ONLY_REF_SPLICE	GOLGA6L5P^ENSG00000230373.8	chr15:84514915:-	GOLGA6B^ENSG00000215186.6	chr15:72658558:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:6161:1897,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1426:14680:1939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2479:28830:5204,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1225:35051:23882	.	YES_LDAS	0.0014	GT	1.9656	AG	1.7465	"[""INTRACHROMOSOMAL[chr15:11.84Mb]""]"	chr15:84514915-chr15:72658558	False			0	Read count too low: 4 < 8	FAIL	4
GDAP1--MIR2052HG	4	0	4.0	0.0	ONLY_REF_SPLICE	GDAP1^ENSG00000104381.14	chr8:74363053:+	MIR2052HG^ENSG00000254349.6	chr8:74612853:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1216:12148:16049,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1449:22107:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:41774:25101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:50786:6325	.	YES_LDAS	0.0135	GT	1.7465	AG	1.9219	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]"	chr8:74363053-chr8:74612853	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
FBXO25--AC240565.1	4	0	0.94	0.0	ONLY_REF_SPLICE	FBXO25^ENSG00000147364.17	chr8:435707:+	AC240565.1^ENSG00000280136.2	chr17:106864:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:29865:22551,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2402:45455:3424,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:47574:19847,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:14049:4377	.	YES_LDAS	0.0032	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr17]""]"	chr8:435707-chr17:106864	False			0	Read count too low: 4 < 8	FAIL	4
DENND6B--CDC14A	4	0	4.0	0.0	INCL_NON_REF_SPLICE	DENND6B^ENSG00000205593.12	chr22:50316025:-	CDC14A^ENSG00000079335.20	chr1:100352508:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:23636:19440,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:22916:16343,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:3556:28912,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:25545:14116	.	NO_LDAS	0.0135	GT	1.9656	AG	1.7968	"[""INTERCHROMOSOMAL[chr22--chr1]""]"	chr22:50316025-chr1:100352508	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	4
CMTM8--CMTM7	4	0	4.0	0.0	ONLY_REF_SPLICE	CMTM8^ENSG00000170293.9	chr3:32239119:+	CMTM7^ENSG00000153551.14	chr3:32449454:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:36758:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2107:37680:23952,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2113:20974:8356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2162:49038:18964	.	YES_LDAS	0.0135	GT	1.9656	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[21377]""]"	chr3:32239119-chr3:32449454	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	4
CCDC30--NUP85	4	0	4.0	0.0	ONLY_REF_SPLICE	CCDC30^ENSG00000186409.18	chr1:42521256:+	NUP85^ENSG00000125450.11	chr17:75231340:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1402:3896:9828,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1375:31160:6044,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1208:20950:13947,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:39088:21290	.	YES_LDAS	0.0135	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:42521256-chr17:75231340	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
BX276092.9--AIFM2	4	0	4.0	0.0	INCL_NON_REF_SPLICE	BX276092.9^ENSG00000283599.2	chrX:71668095:+	AIFM2^ENSG00000042286.15	chr10:70132789:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:28749:20141,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:35844:23882,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2130:13127:25956,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:29760:5134	.	NO_LDAS	0.0135	GT	1.8062	AG	1.2419	"[""INTERCHROMOSOMAL[chrX--chr10]""]"	chrX:71668095-chr10:70132789	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	4
BX005040.4--CNTNAP3C	4	0	4.0	0.0	ONLY_REF_SPLICE	BX005040.4^ENSG00000283541.1	chr9:61096836:-	CNTNAP3C^ENSG00000283378.1	chr9:61425702:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:36030:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1391:17860:26755,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:7941:24793,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1148:4301:15461	.	YES_LDAS	0.0135	GT	1.8062	AG	1.9899	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61096836-chr9:61425702	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
BCKDHB--AL359715.4	4	0	4.0	0.0	INCL_NON_REF_SPLICE	BCKDHB^ENSG00000083123.15	chr6:80273221:+	AL359715.4^ENSG00000279022.1	chr6:80440685:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2357:27284:5834,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:37672:18866,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:40730:15110,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:2027:20295	.	YES_LDAS	0.0135	GT	1.9899	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]"	chr6:80273221-chr6:80440685	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
AP003108.2--PPP1R32	4	0	4.0	0.0	ONLY_REF_SPLICE	AP003108.2^ENSG00000256591.5	chr11:61430182:+	PPP1R32^ENSG00000162148.11	chr11:61481782:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:34331:24989,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1410:47404:18095,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:43699:24821,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:46749:26572	.	YES_LDAS	0.0135	GT	1.8256	AG	1.3996	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]"	chr11:61430182-chr11:61481782	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
ANAPC1--RMND5A	4	0	1.33	0.0	ONLY_REF_SPLICE	ANAPC1^ENSG00000153107.13	chr2:111815370:-	RMND5A^ENSG00000153561.13	chr2:86740927:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:11922:20169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1421:32324:1224,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2394:33975:22187,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1328:36103:7516	.	YES_LDAS	0.0045	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr2:24.83Mb]""]"	chr2:111815370-chr2:86740927	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
ACTB--HEYL	4	0	4.0	0.0	INCL_NON_REF_SPLICE	ACTB^ENSG00000075624.17	chr7:5528004:-	HEYL^ENSG00000163909.8	chr1:39624057:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:39694:9169,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:49014:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:32462:7600,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1156:42364:4265	.	NO_LDAS	0.0135	GT	1.7232	AG	1.8295	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:5528004-chr1:39624057	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
AC092032.2--RBAK	4	0	2.0	0.0	ONLY_REF_SPLICE	AC092032.2^ENSG00000288620.1	chr7:4989177:+	RBAK^ENSG00000146587.18	chr7:5048033:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:10409:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:2618:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:30804:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:1534:7950	.	YES_LDAS	0.0068	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[56644]""]"	chr7:4989177-chr7:5048033	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC092032.2--PMS2CL	4	0	2.0	0.0	ONLY_REF_SPLICE	AC092032.2^ENSG00000288620.1	chr7:4989177:+	PMS2CL^ENSG00000187953.10	chr7:6731897:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1269:10409:19510,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:2618:23111,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:30804:18515,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:1534:7950	.	YES_LDAS	0.0068	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:1.72Mb]""]"	chr7:4989177-chr7:6731897	False			0	Read count too low: 4 < 8	FAIL	4
WDR72--AC011029.1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	WDR72^ENSG00000166415.15	chr15:53684542:-	AC011029.1^ENSG00000287352.1	chr8:76306467:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:51724:17254,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:34938:18389,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1140:50098:29235	.	YES_LDAS	0.0101	GT	1.7465	AG	1.9656	"[""INTERCHROMOSOMAL[chr15--chr8]""]"	chr15:53684542-chr8:76306467	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
UXT--PDZK1IP1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	UXT^ENSG00000126756.12	chrX:47657205:-	PDZK1IP1^ENSG00000162366.8	chr1:47183619:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1442:12294:11005,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:21023:28814,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:51328:25507	.	NO_LDAS	0.0101	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chrX--chr1]""]"	chrX:47657205-chr1:47183619	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
UCHL3--LMO7	3	0	3.0	0.0	ONLY_REF_SPLICE	UCHL3^ENSG00000118939.18	chr13:75569507:+	LMO7^ENSG00000136153.20	chr13:75713182:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:10392:18726,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2440:39832:2906,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1158:50478:27904	.	YES_LDAS	0.0101	GT	1.8323	AG	1.6895	"[""Greger_Normal"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""NEIGHBORS[14414]""]"	chr13:75569507-chr13:75713182	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
TYW1B--CALN1	3	0	3.0	0.0	ONLY_REF_SPLICE	TYW1B^ENSG00000277149.5	chr7:72616672:-	CALN1^ENSG00000183166.11	chr7:72278810:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1478:26006:27497,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2448:42744:1420,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:14672:28632	.	YES_LDAS	0.0101	GT	1.6729	AG	1.9086	"[""INTRACHROMOSOMAL[chr7:0.11Mb]""]"	chr7:72616672-chr7:72278810	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
TVP23C--CDRT4	3	0	3.0	0.0	INCL_NON_REF_SPLICE	TVP23C^ENSG00000175106.17	chr17:15503098:-	CDRT4^ENSG00000239704.11	chr17:15438200:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:31613:22943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2171:30553:7292,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:47566:17282	.	YES_LDAS	0.0101	GT	1.9329	AG	1.6402	"[""INTRACHROMOSOMAL[chr17:0.03Mb]"",""NEIGHBORS[26536]""]"	chr17:15503098-chr17:15438200	False			0	Read count too low: 3 < 8	FAIL	3
TRHDE--RBBP7	3	0	3.0	0.0	INCL_NON_REF_SPLICE	TRHDE^ENSG00000072657.9	chr12:72272638:+	RBBP7^ENSG00000102054.18	chrX:16844626:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:46498:1560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:24243:24555,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:21807:4083	.	NO_LDAS	0.0101	GT	1.1589	AG	0.6998	"[""INTERCHROMOSOMAL[chr12--chrX]""]"	chr12:72272638-chrX:16844626	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
RGS6--AC005993.1	3	0	3.0	0.0	ONLY_REF_SPLICE	RGS6^ENSG00000182732.18	chr14:71964875:+	AC005993.1^ENSG00000266869.2	chr14:71908165:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1320:42850:8160,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:37996:24863,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:11865:3032	.	YES_LDAS	0.0101	GT	1.9086	AG	1.7465	"[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]"	chr14:71964875-chr14:71908165	False			0	Read count too low: 3 < 8	FAIL	3
RAD51B--CEP170P1	3	0	3.0	0.0	ONLY_REF_SPLICE	RAD51B^ENSG00000182185.18	chr14:67887204:+	CEP170P1^ENSG00000154608.14	chr4:118493552:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1496:29194:19146,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1325:17196:10725,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:30375:18894	.	YES_LDAS	0.0101	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr4]""]"	chr14:67887204-chr4:118493552	False			0	Read count too low: 3 < 8	FAIL	3
POU5F1--TYW1	3	0	3.0	0.0	ONLY_REF_SPLICE	POU5F1^ENSG00000204531.20	chr6:31166534:-	TYW1^ENSG00000198874.13	chr7:67067285:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:12326:4447,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1462:8896:18011,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:46862:26825	.	YES_LDAS	0.0101	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr6--chr7]""]"	chr6:31166534-chr7:67067285	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
PINX1--RP1L1	3	0	3.0	0.0	ONLY_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10820193:-	RP1L1^ENSG00000183638.6	chr8:10623220:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2163:2424:11061,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:11242:15433,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:15295:27497	.	YES_LDAS	0.0101	GT	1.8062	AG	1.4566	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10820193-chr8:10623220	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
PIH1D1--WASF3	3	0	3.0	0.0	INCL_NON_REF_SPLICE	PIH1D1^ENSG00000104872.11	chr19:49447338:-	WASF3^ENSG00000132970.14	chr13:26687521:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:11913:26320,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1161:16962:25592,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:51401:6773	.	NO_LDAS	0.0101	GT	1.7968	AG	1.8323	"[""INTERCHROMOSOMAL[chr19--chr13]""]"	chr19:49447338-chr13:26687521	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
MUC20--SMBD1P	3	0	3.0	0.0	ONLY_REF_SPLICE	MUC20^ENSG00000176945.17	chr3:195729739:+	SMBD1P^ENSG00000283426.1	chr3:195708747:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:4317:23980,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:44087:22271,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:21629:13247	.	YES_LDAS	0.0101	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9241]""]"	chr3:195729739-chr3:195708747	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
MUC20--AC026412.4	3	0	3.0	0.0	INCL_NON_REF_SPLICE	MUC20^ENSG00000176945.17	chr3:195729739:+	AC026412.4^ENSG00000288549.1	chr5:1641022:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1153:44144:5330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:43319:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:31912:29319	.	YES_LDAS	0.0101	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr3--chr5]""]"	chr3:195729739-chr5:1641022	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
LRRC37A--NSF	3	0	0.38	0.0	ONLY_REF_SPLICE	LRRC37A^ENSG00000176681.14	chr17:46306309:+	NSF^ENSG00000073969.18	chr17:46674414:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1428:14632:23910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2475:17892:19384,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1436:12415:17577	.	YES_LDAS	0.0013	GT	1.6402	AG	1.7819	"[""INTRACHROMOSOMAL[chr17:0.25Mb]""]"	chr17:46306309-chr17:46674414	False			0	Read count too low: 3 < 8	FAIL	3
LINC01565--C1QBP	3	0	3.0	0.0	ONLY_REF_SPLICE	LINC01565^ENSG00000198685.4	chr3:128575266:-	C1QBP^ENSG00000108561.8	chr17:5434966:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:12690:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:46514:21122,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:4171:7894	.	YES_LDAS	0.0101	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:128575266-chr17:5434966	False			0	Read count too low: 3 < 8	FAIL	3
LINC01145--SRGAP2B	3	0	3.0	0.0	ONLY_REF_SPLICE	LINC01145^ENSG00000272419.6	chr1:145215639:-	SRGAP2B^ENSG00000196369.11	chr1:144995200:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:26071:14522,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1246:1534:13639,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1317:16055:29011	.	YES_LDAS	0.0101	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""NEIGHBORS[68571]""]"	chr1:145215639-chr1:144995200	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
KRTAP5-AS1--AP000867.5	3	0	3.0	0.0	INCL_NON_REF_SPLICE	KRTAP5-AS1^ENSG00000233930.4	chr11:1598289:+	AP000867.5^ENSG00000286948.1	chr11:71563684:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:34525:21934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:35407:15699,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:35560:8286	.	YES_LDAS	0.0101	GT	1.6895	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:69.96Mb]""]"	chr11:1598289-chr11:71563684	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
HRH1--ATG7	3	0	3.0	0.0	ONLY_REF_SPLICE	HRH1^ENSG00000196639.7	chr3:11154554:+	ATG7^ENSG00000197548.12	chr3:11298686:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1328:20181:25900,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:13410:25914,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1308:31305:12574	.	YES_LDAS	0.0101	GT	1.2867	AG	1.7968	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[8752]""]"	chr3:11154554-chr3:11298686	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
HPS5--FXYD2	3	0	3.0	0.0	INCL_NON_REF_SPLICE	HPS5^ENSG00000110756.18	chr11:18291442:-	FXYD2^ENSG00000137731.14	chr11:117819204:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:25763:23546,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1288:38651:12910,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2115:26071:9814	.	NO_LDAS	0.0101	GT	1.5656	AG	1.7465	"[""INTRACHROMOSOMAL[chr11:99.48Mb]""]"	chr11:18291442-chr11:117819204	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
FOXO1--LINC00598	3	0	3.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40466677:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:19874:21752,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:24679:22257,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2455:10490:19847	.	YES_LDAS	0.0101	GT	1.7232	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40466677	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
FOXO1--LINC00598	3	0	3.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40350302:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:27212:25353,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:52202:25003,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1330:16994:14410	.	YES_LDAS	0.0101	GT	1.7232	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40350302	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
FBXL5--AC099550.1	3	0	3.0	0.0	ONLY_REF_SPLICE	FBXL5^ENSG00000118564.15	chr4:15612266:-	AC099550.1^ENSG00000251379.1	chr4:15362523:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:17601:14676,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1333:37761:7754,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1391:12156:10010	.	YES_LDAS	0.0101	GT	1.9219	AG	1.5329	"[""INTRACHROMOSOMAL[chr4:0.18Mb]""]"	chr4:15612266-chr4:15362523	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
CPSF6--AGT	3	0	3.0	0.0	INCL_NON_REF_SPLICE	CPSF6^ENSG00000111605.18	chr12:69262566:+	AGT^ENSG00000135744.9	chr1:230693249:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:36078:24092,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:18555:9632,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2326:6259:27904	.	NO_LDAS	0.0101	GT	1.8062	AG	1.6729	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:69262566-chr1:230693249	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	3
BX005040.4--CNTNAP3C	3	0	3.0	0.0	ONLY_REF_SPLICE	BX005040.4^ENSG00000283541.1	chr9:61096836:-	CNTNAP3C^ENSG00000283378.1	chr9:61440605:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:17868:2499,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:41256:24653,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:43497:24218	.	YES_LDAS	0.0101	GT	1.8062	AG	1.7819	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61096836-chr9:61440605	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
BAG2--PRIM2	3	0	3.0	0.0	ONLY_REF_SPLICE	BAG2^ENSG00000112208.11	chr6:57172810:+	PRIM2^ENSG00000146143.19	chr6:57318437:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:43230:20954,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1341:13709:11635,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1466:11913:24639	.	YES_LDAS	0.0101	GT	1.9086	AG	1.8323	"[""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]"	chr6:57172810-chr6:57318437	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
AL139094.1--TMC4	3	0	3.0	0.0	INCL_NON_REF_SPLICE	AL139094.1^ENSG00000220685.3	chr6:5066922:-	TMC4^ENSG00000167608.12	chr19:54171991:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:28935:4881,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1128:2683:16554,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:1647:17506	.	NO_LDAS	0.0101	GT	1.4566	AG	1.231	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:5066922-chr19:54171991	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	3
AL022157.1--FAAH2	3	0	3.0	0.0	INCL_NON_REF_SPLICE	AL022157.1^ENSG00000226310.1	chrX:57127058:+	FAAH2^ENSG00000165591.7	chrX:57292498:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:12965:12700,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:20796:8272,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:12682:25017	.	YES_LDAS	0.0101	GT	1.9656	AG	1.5656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.16Mb]""]"	chrX:57127058-chrX:57292498	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
AC104383.1--GALNT18	3	0	3.0	0.0	ONLY_REF_SPLICE	AC104383.1^ENSG00000286959.1	chr11:11811462:-	GALNT18^ENSG00000110328.6	chr11:11448936:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:44807:2107,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:4891:22032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2255:50317:16610	.	YES_LDAS	0.0101	GT	1.8295	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:0.16Mb]""]"	chr11:11811462-chr11:11448936	False			0	Read count too low: 3 < 8	FAIL	3
AC019186.1--ACVR1C	3	0	3.0	0.0	ONLY_REF_SPLICE	AC019186.1^ENSG00000234584.1	chr2:157735944:-	ACVR1C^ENSG00000123612.16	chr2:157587417:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1218:5320:11930,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1155:31993:1182,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:36111:5428	.	YES_LDAS	0.0101	GT	1.9899	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.10Mb]"",""NEIGHBORS[96844]""]"	chr2:157735944-chr2:157587417	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
AC008740.1--CRYM-AS1	3	0	3.0	0.0	INCL_NON_REF_SPLICE	AC008740.1^ENSG00000257403.2	chr16:21352138:+	CRYM-AS1^ENSG00000189149.12	chr16:21315907:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:25052:9281,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:10457:1490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:49136:19328	.	YES_LDAS	0.0101	GT	1.7232	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8102]""]"	chr16:21352138-chr16:21315907	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
GNG10--UGCG	3	1	3.0	1.0	ONLY_REF_SPLICE	GNG10^ENSG00000242616.4	chr9:111666946:+	UGCG^ENSG00000148154.10	chr9:111914605:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23288:8132,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:43861:6128,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2353:23620:23812	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1387:8969:18669	YES_LDAS	0.0135	GT	1.9329	AG	1.7819	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.23Mb]""]"	chr9:111666946-chr9:111914605	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	4
CMC2--ARLNC1	3	1	3.0	0.6	ONLY_REF_SPLICE	CMC2^ENSG00000103121.9	chr16:80997314:-	ARLNC1^ENSG00000260896.6	chr16:80840222:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:30294:21472,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:19178:19875,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:42202:16904	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1233:10700:20715	YES_LDAS	0.0121	GT	1.7232	AG	1.7056	"[""INTRACHROMOSOMAL[chr16:0.07Mb]"",""NEIGHBORS[73766]""]"	chr16:80997314-chr16:80840222	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	4
AC242842.1--SEC22B2P	3	1	0.75	0.25	ONLY_REF_SPLICE	AC242842.1^ENSG00000275557.1	chr1:149608516:+	SEC22B2P^ENSG00000274423.1	chr1:149351251:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:51425:28983,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2243:19122:5596,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:6218:14186	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:13750:6661	YES_LDAS	0.0033	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.25Mb]""]"	chr1:149608516-chr1:149351251	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	4
AC005993.1--RGS6	3	1	3.0	0.23	ONLY_REF_SPLICE	AC005993.1^ENSG00000266869.2	chr14:71848736:+	RGS6^ENSG00000182732.18	chr14:72352095:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:25521:22565,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:41539:9562,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:50365:8146	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516	YES_LDAS	0.0109	GT	1.9656	AG	1.8323	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]"	chr14:71848736-chr14:72352095	False			0	Read count too low: 4 < 8	FAIL	4
WDR27--AL135910.1	3	2	3.0	1.0	INCL_NON_REF_SPLICE	WDR27^ENSG00000184465.16	chr6:169582836:-	AL135910.1^ENSG00000272848.2	chr6:169433402:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1274:11113:25073,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2114:16420:3859,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1468:18305:4041	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:20473:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011	YES_LDAS	0.0135	GT	1.6729	AG	1.8323	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]"	chr6:169582836-chr6:169433402	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	5
AC005993.1--RGS6	3	2	3.0	0.59	ONLY_REF_SPLICE	AC005993.1^ENSG00000266869.2	chr14:71908434:+	RGS6^ENSG00000182732.18	chr14:72352095:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1416:17819:27665,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:22527:8945,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2280:37081:11453	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740	YES_LDAS	0.0121	GT	1.8892	AG	1.8323	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]"	chr14:71908434-chr14:72352095	False			0	Read count too low: 5 < 8	FAIL	5
AC005993.1--RGS6	3	3	3.0	1.79	ONLY_REF_SPLICE	AC005993.1^ENSG00000266869.2	chr14:71916030:+	RGS6^ENSG00000182732.18	chr14:72352095:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1289:13321:9337,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2336:15182:3004,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1168:51732:5862	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:4163:5162,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740	YES_LDAS	0.0162	GT	1.6402	AG	1.8323	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]"	chr14:71916030-chr14:72352095	False			0	Read count too low: 6 < 8	FAIL	6
YWHAEP7--MRPL45	2	0	2.0	0.0	ONLY_REF_SPLICE	YWHAEP7^ENSG00000276715.4	chr17:37874204:-	MRPL45^ENSG00000278845.5	chr17:38298449:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:38934:20071,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:45616:16231	.	YES_LDAS	0.0068	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr17:0.41Mb]""]"	chr17:37874204-chr17:38298449	False			0	Read count too low: 2 < 8	FAIL	2
WDR70--NACAD	2	0	1.0	0.0	INCL_NON_REF_SPLICE	WDR70^ENSG00000082068.9	chr5:37396574:+	NACAD^ENSG00000136274.9	chr7:45085185:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1296:25950:27007,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1324:32017:12630	.	NO_LDAS	0.0034	GT	1.2729	AG	0.9968	"[""INTERCHROMOSOMAL[chr5--chr7]""]"	chr5:37396574-chr7:45085185	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
VPS16--LHX9	2	0	1.0	0.0	INCL_NON_REF_SPLICE	VPS16^ENSG00000215305.10	chr20:2861678:+	LHX9^ENSG00000143355.16	chr1:197916022:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:43618:4391,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:41741:3802	.	NO_LDAS	0.0034	GT	1.7232	AG	1.8295	"[""INTERCHROMOSOMAL[chr20--chr1]""]"	chr20:2861678-chr1:197916022	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
VAMP1--AC096588.1	2	0	2.0	0.0	ONLY_REF_SPLICE	VAMP1^ENSG00000139190.17	chr12:6464890:-	AC096588.1^ENSG00000249392.1	chr4:59551254:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1104:7642:18025,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:49233:19076	.	NO_LDAS	0.0068	GT	1.5301	AG	1.8062	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:6464890-chr4:59551254	False			0	Read count too low: 2 < 8	FAIL	2
UTP25--TSPAN1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	UTP25^ENSG00000117597.18	chr1:209854579:+	TSPAN1^ENSG00000117472.10	chr1:46184594:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:37890:9351,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1258:31669:22397	.	NO_LDAS	0.0068	GC	1.8062	AG	1.2729	"[""INTRACHROMOSOMAL[chr1:163.64Mb]""]"	chr1:209854579-chr1:46184594	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
UQCRB--TEX13B	2	0	2.0	0.0	INCL_NON_REF_SPLICE	UQCRB^ENSG00000156467.10	chr8:96231793:-	TEX13B^ENSG00000170925.3	chrX:107982153:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1152:29048:16568,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:23798:28660	.	NO_LDAS	0.0068	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chrX]""]"	chr8:96231793-chrX:107982153	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
UBXN7--RNF168	2	0	2.0	0.0	ONLY_REF_SPLICE	UBXN7^ENSG00000163960.12	chr3:196391813:-	RNF168^ENSG00000163961.4	chr3:196483891:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1310:40625:27203,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1118:24234:28492	.	YES_LDAS	0.0068	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[36353]""]"	chr3:196391813-chr3:196483891	False			0	Read count too low: 2 < 8	FAIL	2
U62317.3--RMI1	2	0	2.0	0.0	ONLY_REF_SPLICE	U62317.3^ENSG00000273272.2	chr22:50541456:+	RMI1^ENSG00000178966.17	chr9:83999709:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:25230:14354,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1162:19947:28856	.	NO_LDAS	0.0068	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr22--chr9]""]"	chr22:50541456-chr9:83999709	False			0	Read count too low: 2 < 8	FAIL	2
TYW1B--CALN1	2	0	1.0	0.0	ONLY_REF_SPLICE	TYW1B^ENSG00000277149.5	chr7:72616672:-	CALN1^ENSG00000183166.11	chr7:72403442:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:24162:24667,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:8168:8314	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9086	"[""INTRACHROMOSOMAL[chr7:0.11Mb]""]"	chr7:72616672-chr7:72403442	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
TSC1--RABGAP1	2	0	0.4	0.0	ONLY_REF_SPLICE	TSC1^ENSG00000165699.15	chr9:132944543:-	RABGAP1^ENSG00000011454.18	chr9:122957011:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:50883:2149,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2488:41013:4811	.	NO_LDAS	0.0014	GT	1.3753	AG	1.5329	"[""INTRACHROMOSOMAL[chr9:9.79Mb]""]"	chr9:132944543-chr9:122957011	False			0	Read count too low: 2 < 8	FAIL	2
TMEM141--NUDT16L2P	2	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM141^ENSG00000244187.8	chr9:136792358:+	NUDT16L2P^ENSG00000246082.2	chr3:131361917:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409	.	NO_LDAS	0.0034	GT	1.5058	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr3]""]"	chr9:136792358-chr3:131361917	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
TMEM141--AC018445.3	2	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM141^ENSG00000244187.8	chr9:136792358:+	AC018445.3^ENSG00000279637.1	chr18:79421494:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:29428:20477,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:20157:25409	.	NO_LDAS	0.0034	GT	1.5058	AG	1.8062	"[""INTERCHROMOSOMAL[chr9--chr18]""]"	chr9:136792358-chr18:79421494	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
TMCO2--HKDC1	2	0	2.0	0.0	ONLY_REF_SPLICE	TMCO2^ENSG00000188800.6	chr1:40247448:+	HKDC1^ENSG00000156510.13	chr10:69232764:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:45277:11972,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:27818:19875	.	YES_LDAS	0.0068	GT	1.9656	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:40247448-chr10:69232764	False			0	Read count too low: 2 < 8	FAIL	2
TBC1D4--FAM76B	2	0	2.0	0.0	INCL_NON_REF_SPLICE	TBC1D4^ENSG00000136111.14	chr13:75302239:-	FAM76B^ENSG00000077458.13	chr11:95786626:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:39120:6493,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2215:1396:15503	.	NO_LDAS	0.0068	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr13--chr11]""]"	chr13:75302239-chr11:95786626	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
TANGO2--PLIN4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	TANGO2^ENSG00000183597.16	chr22:20066771:+	PLIN4^ENSG00000167676.4	chr19:4513223:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1437:2375:13163,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:42947:7684	.	NO_LDAS	0.0068	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr22--chr19]""]"	chr22:20066771-chr19:4513223	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
SYNJ2BP--TRMT11	2	0	2.0	0.0	INCL_NON_REF_SPLICE	SYNJ2BP^ENSG00000213463.5	chr14:70372555:-	TRMT11^ENSG00000066651.20	chr6:125986531:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44581:6563,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:44597:6563	.	NO_LDAS	0.0068	GT	1.5058	AG	1.6402	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:70372555-chr6:125986531	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
SYCE1L--AC009139.1	2	0	2.0	0.0	ONLY_REF_SPLICE	SYCE1L^ENSG00000205078.6	chr16:77212369:+	AC009139.1^ENSG00000260922.2	chr16:77289276:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:46474:25479,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2254:32753:3620	.	YES_LDAS	0.0068	GT	1.7232	AG	1.8323	"[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21662]""]"	chr16:77212369-chr16:77289276	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
STX5--NECAB1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	STX5^ENSG00000162236.13	chr11:62831112:-	NECAB1^ENSG00000123119.12	chr8:90940762:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1362:22536:8427,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:26055:21164	.	NO_LDAS	0.0068	GT	1.2366	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chr8]""]"	chr11:62831112-chr8:90940762	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
SRSF6--L3MBTL1	2	0	2.0	0.0	ONLY_REF_SPLICE	SRSF6^ENSG00000124193.16	chr20:43460598:+	L3MBTL1^ENSG00000185513.17	chr20:43513476:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2361:26289:3774,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:4754:29333	.	YES_LDAS	0.0068	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr20:0.02Mb]"",""NEIGHBORS[23396]""]"	chr20:43460598-chr20:43513476	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
SNX11--CBX1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	SNX11^ENSG00000002919.15	chr17:48121565:+	CBX1^ENSG00000108468.15	chr17:48071579:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1340:30593:26278,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1170:48941:16498	.	YES_LDAS	0.0068	GT	1.9656	AG	1.8295	"[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_INVERSION:+:-:[1879]""]"	chr17:48121565-chr17:48071579	False			0	Read count too low: 2 < 8	FAIL	2
SNORC--AL049872.1	2	0	0.4	0.0	INCL_NON_REF_SPLICE	SNORC^ENSG00000182600.9	chr2:232870414:+	AL049872.1^ENSG00000259020.3	chr14:92026611:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:20554:9029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:41070:18698	.	YES_LDAS	0.0014	GT	1.9086	AG	1.6895	"[""INTERCHROMOSOMAL[chr2--chr14]""]"	chr2:232870414-chr14:92026611	False			0	Read count too low: 2 < 8	FAIL	2
SMURF2P1--AC005562.2	2	0	0.75	0.0	INCL_NON_REF_SPLICE	SMURF2P1^ENSG00000248121.8	chr17:30610942:+	AC005562.2^ENSG00000273609.1	chr17:30617791:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:17746:13079,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:9325:8272	.	YES_LDAS	0.0025	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_INVERSION:+:-:[1700]""]"	chr17:30610942-chr17:30617791	False			0	Read count too low: 2 < 8	FAIL	2
SMIM13--AL022098.1	2	0	2.0	0.0	ONLY_REF_SPLICE	SMIM13^ENSG00000224531.6	chr6:11094389:+	AL022098.1^ENSG00000287920.1	chr6:11295769:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:6008:23490,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:5174:19861	.	YES_LDAS	0.0068	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.15Mb]""]"	chr6:11094389-chr6:11295769	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
SMIM13--AL022098.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	SMIM13^ENSG00000224531.6	chr6:11094389:+	AL022098.1^ENSG00000287920.1	chr6:11294979:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:9907:11719,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1216:43481:7852	.	YES_LDAS	0.0068	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.15Mb]""]"	chr6:11094389-chr6:11294979	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
SMAGP--POU6F1	2	0	2.0	0.0	ONLY_REF_SPLICE	SMAGP^ENSG00000170545.17	chr12:51246751:-	POU6F1^ENSG00000184271.17	chr12:51206883:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1264:1332:23714,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:42372:3859	.	YES_LDAS	0.0068	GT	1.9656	AG	1.6895	"[""INTRACHROMOSOMAL[chr12:0.03Mb]"",""NEIGHBORS[26850]""]"	chr12:51246751-chr12:51206883	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
RPL12P31--RPL12P35	2	0	1.0	0.0	INCL_NON_REF_SPLICE	RPL12P31^ENSG00000241228.1	chr11:35997632:-	RPL12P35^ENSG00000243007.1	chr15:72379652:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:1607:21892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:18070:14480	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9219	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:35997632-chr15:72379652	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
RELL1--SET	2	0	1.0	0.0	ONLY_REF_SPLICE	RELL1^ENSG00000181826.10	chr4:37686200:-	SET^ENSG00000119335.17	chr9:128691170:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1275:23345:15152,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2169:42793:21822	.	YES_LDAS	0.0034	GT	1.5058	AG	1.2419	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:37686200-chr9:128691170	False			0	Read count too low: 2 < 8	FAIL	2
RBM39--PRSS23	2	0	2.0	0.0	INCL_NON_REF_SPLICE	RBM39^ENSG00000131051.24	chr20:35729312:-	PRSS23^ENSG00000150687.12	chr11:86937052:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:2125:22088,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:15182:23350	.	NO_LDAS	0.0068	GT	1.9329	AG	1.3753	"[""INTERCHROMOSOMAL[chr20--chr11]""]"	chr20:35729312-chr11:86937052	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
RARS2--TLCD2	2	0	2.0	0.0	INCL_NON_REF_SPLICE	RARS2^ENSG00000146282.18	chr6:87555408:-	TLCD2^ENSG00000185561.10	chr17:1707163:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:42348:7432,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:3929:9155	.	YES_LDAS	0.0068	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr6--chr17]""]"	chr6:87555408-chr17:1707163	False			0	Read count too low: 2 < 8	FAIL	2
PRELID2--AC137770.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	PRELID2^ENSG00000186314.11	chr5:145764931:-	AC137770.1^ENSG00000250842.1	chr5:145381718:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1313:32664:3214,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:32583:3690	.	YES_LDAS	0.0068	GT	1.5546	AG	1.7819	"[""INTRACHROMOSOMAL[chr5:0.09Mb]"",""NEIGHBORS[90129]""]"	chr5:145764931-chr5:145381718	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
PHBP11--KLK5	2	0	2.0	0.0	INCL_NON_REF_SPLICE	PHBP11^ENSG00000227621.1	chr1:223856813:-	KLK5^ENSG00000167754.13	chr19:50952913:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1192:47566:21878,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1224:27446:3676	.	NO_LDAS	0.0068	GT	1.8892	AG	1.6402	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:223856813-chr19:50952913	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
PAXX--ACTB	2	0	2.0	0.0	INCL_NON_REF_SPLICE	PAXX^ENSG00000148362.11	chr9:136992566:+	ACTB^ENSG00000075624.17	chr7:5527252:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:43618:1364,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:17908:27820	.	YES_LDAS	0.0068	GT	1.9329	AG	1.8062	"[""INTERCHROMOSOMAL[chr9--chr7]""]"	chr9:136992566-chr7:5527252	False			0	Read count too low: 2 < 8	FAIL	2
OPN3--CD47	2	0	2.0	0.0	ONLY_REF_SPLICE	OPN3^ENSG00000054277.14	chr1:241614043:-	CD47^ENSG00000196776.17	chr3:108051970:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48149:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:10773:2037	.	NO_LDAS	0.0068	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:241614043-chr3:108051970	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
NPM1P31--NPM1P4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NPM1P31^ENSG00000214807.2	chr10:124867902:+	NPM1P4^ENSG00000226703.1	chr13:27696868:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2146:49500:16400,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:21816:10542	.	NO_LDAS	0.0068	GT	1.2867	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr13]""]"	chr10:124867902-chr13:27696868	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
NOS1AP--ZNF793-AS1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NOS1AP^ENSG00000198929.13	chr1:162070282:+	ZNF793-AS1^ENSG00000266916.7	chr19:37497358:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2461:14624:21682,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:7068:22018	.	NO_LDAS	0.0068	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:162070282-chr19:37497358	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
NEDD8--SCN8A	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NEDD8^ENSG00000129559.13	chr14:24218133:-	SCN8A^ENSG00000196876.18	chr12:51689982:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:33101:3410,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:35738:5176	.	NO_LDAS	0.0068	GT	1.9086	AG	1.5546	"[""INTERCHROMOSOMAL[chr14--chr12]""]"	chr14:24218133-chr12:51689982	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
NDUFS5--NDUFS5P2	2	0	2.0	0.0	INCL_NON_REF_SPLICE	NDUFS5^ENSG00000168653.11	chr1:39034556:+	NDUFS5P2^ENSG00000234226.5	chr1:96584461:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:27810:25437,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:40212:19678	.	NO_LDAS	0.0068	GT	1.9899	AG	1.371	"[""INTRACHROMOSOMAL[chr1:57.55Mb]""]"	chr1:39034556-chr1:96584461	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
MRPS6--AP000317.1	2	0	2.0	0.0	ONLY_REF_SPLICE	MRPS6^ENSG00000243927.6	chr21:34073745:+	AP000317.1^ENSG00000214955.5	chr21:34293681:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2294:28029:11243,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1211:9592:9267	.	YES_LDAS	0.0068	GT	1.8256	AG	1.9329	"[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]"	chr21:34073745-chr21:34293681	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
MRPS6--AP000317.1	2	0	2.0	0.0	ONLY_REF_SPLICE	MRPS6^ENSG00000243927.6	chr21:34073745:+	AP000317.1^ENSG00000214955.5	chr21:34262820:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:32276:10304,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:28854:13681	.	YES_LDAS	0.0068	GT	1.8256	AG	1.8892	"[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[62021]""]"	chr21:34073745-chr21:34262820	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
MAP3K14-AS1--AC106799.2	2	0	2.0	0.0	ONLY_REF_SPLICE	MAP3K14-AS1^ENSG00000267278.6	chr17:45255218:+	AC106799.2^ENSG00000248973.3	chr5:4657565:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:46361:1911,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1433:41329:5638	.	NO_LDAS	0.0068	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr5]""]"	chr17:45255218-chr5:4657565	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
LSP1P4--AC245060.4	2	0	2.0	0.0	ONLY_REF_SPLICE	LSP1P4^ENSG00000143429.10	chr2:91659909:-	AC245060.4^ENSG00000272779.1	chr22:22303224:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2282:47016:6325,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:41507:15895	.	YES_LDAS	0.0068	GT	1.9329	AG	1.9219	"[""INTERCHROMOSOMAL[chr2--chr22]""]"	chr2:91659909-chr22:22303224	False			0	Read count too low: 2 < 8	FAIL	2
LINC02108--COA1	2	0	1.0	0.0	ONLY_REF_SPLICE	LINC02108^ENSG00000250127.1	chr5:58547135:-	COA1^ENSG00000106603.19	chr7:43650712:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:36750:5806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20918:6605	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9899	"[""INTERCHROMOSOMAL[chr5--chr7]""]"	chr5:58547135-chr7:43650712	False			0	Read count too low: 2 < 8	FAIL	2
LINC02093--MOSPD1	2	0	2.0	0.0	ONLY_REF_SPLICE	LINC02093^ENSG00000234634.2	chr17:13301119:-	MOSPD1^ENSG00000101928.13	chrX:134891640:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:31871:20029,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2475:42243:27231	.	YES_LDAS	0.0068	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chrX]""]"	chr17:13301119-chrX:134891640	False			0	Read count too low: 2 < 8	FAIL	2
LINC00592--ANKRD13C	2	0	2.0	0.0	ONLY_REF_SPLICE	LINC00592^ENSG00000258279.4	chr12:52222943:+	ANKRD13C^ENSG00000118454.13	chr1:70324957:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2329:14826:9870,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:15457:5834	.	NO_LDAS	0.0068	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:52222943-chr1:70324957	False			0	Read count too low: 2 < 8	FAIL	2
LINC00511--SLC39A11	2	0	2.0	0.0	ONLY_REF_SPLICE	LINC00511^ENSG00000227036.8	chr17:72603103:-	SLC39A11^ENSG00000133195.11	chr17:72649268:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2401:24040:16021,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:21816:27301	.	YES_LDAS	0.0068	GT	1.6729	AG	1.9086	"[""DEEPEST2019"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5477]""]"	chr17:72603103-chr17:72649268	False			0	Read count too low: 2 < 8	FAIL	2
KRT8P10--KRT6B	2	0	0.5	0.0	INCL_NON_REF_SPLICE	KRT8P10^ENSG00000231203.1	chr2:183071891:-	KRT6B^ENSG00000185479.6	chr12:52451583:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1231:29218:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:7076:24527	.	YES_LDAS	0.0017	GT	1.9219	AG	1.8323	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:183071891-chr12:52451583	False			0	Read count too low: 2 < 8	FAIL	2
KIF20B--DMGDH	2	0	2.0	0.0	INCL_NON_REF_SPLICE	KIF20B^ENSG00000138182.15	chr10:89762835:+	DMGDH^ENSG00000132837.15	chr5:79021360:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:43238:6423,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2469:31054:24723	.	NO_LDAS	0.0068	GT	1.4295	AG	1.6895	"[""INTERCHROMOSOMAL[chr10--chr5]""]"	chr10:89762835-chr5:79021360	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
KCNMB2-AS1--GLDN	2	0	1.0	0.0	ONLY_REF_SPLICE	KCNMB2-AS1^ENSG00000237978.6	chr3:178860294:-	GLDN^ENSG00000186417.14	chr15:51377449:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:19769:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:29776:9057	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chr15]""]"	chr3:178860294-chr15:51377449	False			0	Read count too low: 2 < 8	FAIL	2
IARS1--AP002495.1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	IARS1^ENSG00000196305.18	chr9:92270992:-	AP002495.1^ENSG00000254469.8	chr11:71865747:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:45333:15489,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2218:20570:2023	.	NO_LDAS	0.0068	GC	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:92270992-chr11:71865747	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
HTR7--LINC02653	2	0	2.0	0.0	ONLY_REF_SPLICE	HTR7^ENSG00000148680.16	chr10:90748839:-	LINC02653^ENSG00000236373.2	chr10:90543450:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1140:38206:24302,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:44476:19945	.	YES_LDAS	0.0068	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr10:0.11Mb]""]"	chr10:90748839-chr10:90543450	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
HNRNPKP3--CACNB2	2	0	2.0	0.0	INCL_NON_REF_SPLICE	HNRNPKP3^ENSG00000251557.2	chr11:43261684:-	CACNB2^ENSG00000165995.22	chr10:18541050:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:36717:7404,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:47242:25437	.	NO_LDAS	0.0068	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr10]""]"	chr11:43261684-chr10:18541050	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
HMGN2--CD4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	HMGN2^ENSG00000198830.11	chr1:26474135:+	CD4^ENSG00000010610.10	chr12:6815882:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:36693:23504,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2165:50883:24260	.	NO_LDAS	0.0068	GT	1.8256	AG	1.5628	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:26474135-chr12:6815882	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
HELLPAR--PARPBP	2	0	2.0	0.0	INCL_NON_REF_SPLICE	HELLPAR^ENSG00000281344.1	chr12:102205157:+	PARPBP^ENSG00000185480.12	chr12:102153869:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:12795:22943,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1281:15279:26909	.	YES_LDAS	0.0068	GT	1.5301	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[65]""]"	chr12:102205157-chr12:102153869	False			0	Read count too low: 2 < 8	FAIL	2
GPR135--L3HYPDH	2	0	2.0	0.0	ONLY_REF_SPLICE	GPR135^ENSG00000181619.11	chr14:59456438:-	L3HYPDH^ENSG00000126790.12	chr14:59479351:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:4018:3929,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:14348:6941	.	YES_LDAS	0.0068	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[4979]""]"	chr14:59456438-chr14:59479351	False			0	Read count too low: 2 < 8	FAIL	2
GOLGA2P8--ZNF774	2	0	2.0	0.0	INCL_NON_REF_SPLICE	GOLGA2P8^ENSG00000214433.4	chr15:90295226:+	ZNF774^ENSG00000196391.11	chr15:90354642:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1358:32033:4895,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:40916:12098	.	YES_LDAS	0.0068	GT	1.5329	AG	1.9899	"[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[56601]""]"	chr15:90295226-chr15:90354642	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
GCOM1--MTRNR2L12	2	0	1.0	0.0	INCL_NON_REF_SPLICE	GCOM1^ENSG00000137878.17	chr15:57637774:+	MTRNR2L12^ENSG00000269028.3	chr3:96617452:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:45455:21724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:24194:2808	.	NO_LDAS	0.0034	GT	1.8892	AG	1.2419	"[""INTERCHROMOSOMAL[chr15--chr3]""]"	chr15:57637774-chr3:96617452	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
FUS--NTM	2	0	1.0	0.0	INCL_NON_REF_SPLICE	FUS^ENSG00000089280.19	chr16:31184352:+	NTM^ENSG00000182667.14	chr11:131911603:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1414:32413:25283,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:47946:24835	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr11]""]"	chr16:31184352-chr11:131911603	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
FOXO1--LINC00598	2	0	2.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40474095:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2128:50446:11846,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2231:2343:19020	.	YES_LDAS	0.0068	GT	1.7232	AG	1.8295	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40474095	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
FAM155B--EDA	2	0	2.0	0.0	ONLY_REF_SPLICE	FAM155B^ENSG00000130054.5	chrX:69506143:+	EDA^ENSG00000158813.18	chrX:69957027:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:3621:28716,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1331:42502:4783	.	YES_LDAS	0.0068	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""NEIGHBORS[83559]""]"	chrX:69506143-chrX:69957027	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
DEF8--TCF3P1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	DEF8^ENSG00000140995.17	chr16:89957570:+	TCF3P1^ENSG00000236567.2	chr9:5112450:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:12391:12630,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:44621:7025	.	NO_LDAS	0.0068	GT	1.6895	AG	1.8256	"[""INTERCHROMOSOMAL[chr16--chr9]""]"	chr16:89957570-chr9:5112450	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
DBNDD2--SYS1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	DBNDD2^ENSG00000244274.8	chr20:45410255:+	SYS1^ENSG00000204070.10	chr20:45366875:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1413:39274:24527,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:28223:10767	.	YES_LDAS	0.0068	GT	1.8256	AG	1.585	"[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[29259]""]"	chr20:45410255-chr20:45366875	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
CYP20A1--SPECC1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	CYP20A1^ENSG00000119004.16	chr2:203246921:+	SPECC1^ENSG00000128487.18	chr17:20315855:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:8863:2934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:6477:11635	.	NO_LDAS	0.0068	GT	1.7465	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr17]""]"	chr2:203246921-chr17:20315855	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
CR382285.1--RPA1	2	0	2.0	0.0	ONLY_REF_SPLICE	CR382285.1^ENSG00000270533.2	chr21:9992166:-	RPA1^ENSG00000132383.12	chr17:1853101:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:39080:15671,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:39792:27385	.	YES_LDAS	0.0068	GT	1.8892	AG	1.8062	"[""INTERCHROMOSOMAL[chr21--chr17]""]"	chr21:9992166-chr17:1853101	False			0	Read count too low: 2 < 8	FAIL	2
CNTNAP3C--BX005040.4	2	0	2.0	0.0	ONLY_REF_SPLICE	CNTNAP3C^ENSG00000283378.1	chr9:61453030:+	BX005040.4^ENSG00000283541.1	chr9:61104578:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1317:17673:3844,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:47356:24737	.	YES_LDAS	0.0068	GT	1.8295	AG	1.9656	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61453030-chr9:61104578	False			0	Read count too low: 2 < 8	FAIL	2
CLVS1--PLS3	2	0	1.0	0.0	ONLY_REF_SPLICE	CLVS1^ENSG00000177182.11	chr8:61465804:+	PLS3^ENSG00000102024.18	chrX:115610243:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chrX]""]"	chr8:61465804-chrX:115610243	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
CLN3--HMGB1P5	2	0	1.0	0.0	INCL_NON_REF_SPLICE	CLN3^ENSG00000188603.22	chr16:28475958:-	HMGB1P5^ENSG00000132967.9	chr3:22382350:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2105:20901:21150,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:42081:17338	.	NO_LDAS	0.0034	GC	1.6402	AG	1.6402	"[""INTERCHROMOSOMAL[chr16--chr3]""]"	chr16:28475958-chr3:22382350	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
CLHC1--XRN1	2	0	2.0	0.0	ONLY_REF_SPLICE	CLHC1^ENSG00000162994.16	chr2:55222235:-	XRN1^ENSG00000114127.11	chr3:142335509:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:4115:3060,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:4123:3046	.	NO_LDAS	0.0068	GT	1.5058	AG	1.5301	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:55222235-chr3:142335509	False			0	Read count too low: 2 < 8	FAIL	2
CLDN15--FIS1	2	0	2.0	0.0	ONLY_REF_SPLICE	CLDN15^ENSG00000106404.14	chr7:101237365:-	FIS1^ENSG00000214253.9	chr7:101240906:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:14211:5610,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2410:44346:8034	.	YES_LDAS	0.0068	GT	1.5656	AG	1.9329	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[638]""]"	chr7:101237365-chr7:101240906	False			0	Read count too low: 2 < 8	FAIL	2
CDKN1C--AC007967.4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	CDKN1C^ENSG00000129757.14	chr11:2885056:-	AC007967.4^ENSG00000273731.1	chrY:8931269:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:36337:5680,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:31766:15979	.	NO_LDAS	0.0068	GT	1.2729	AG	1.4566	"[""INTERCHROMOSOMAL[chr11--chrY]""]"	chr11:2885056-chrY:8931269	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
C12orf65--THEM4	2	0	2.0	0.0	ONLY_REF_SPLICE	C12orf65^ENSG00000130921.9	chr12:123248480:+	THEM4^ENSG00000159445.13	chr1:151895194:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1472:30116:19454,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:45681:7712	.	NO_LDAS	0.0068	GT	1.8295	AG	1.7232	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:123248480-chr1:151895194	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
BX005040.4--CNTNAP3C	2	0	2.0	0.0	ONLY_REF_SPLICE	BX005040.4^ENSG00000283541.1	chr9:61113783:-	CNTNAP3C^ENSG00000283378.1	chr9:61425702:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:46522:24330,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:37308:15265	.	YES_LDAS	0.0068	GT	1.8256	AG	1.9899	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61113783-chr9:61425702	False			0	Read count too low: 2 < 8	FAIL	2
BCKDHB--AL359715.1	2	0	2.0	0.0	ONLY_REF_SPLICE	BCKDHB^ENSG00000083123.15	chr6:80273221:+	AL359715.1^ENSG00000233967.7	chr6:80453157:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2121:47542:20939,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1201:20036:18585	.	YES_LDAS	0.0068	GT	1.9899	AG	1.7232	"[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]"	chr6:80273221-chr6:80453157	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
BCAP29--SLC26A4	2	0	2.0	0.0	ONLY_REF_SPLICE	BCAP29^ENSG00000075790.12	chr7:107613432:+	SLC26A4^ENSG00000091137.14	chr7:107661639:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:48084:15825,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2205:6218:13849	.	YES_LDAS	0.0068	GT	1.9329	AG	1.9086	"[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""NEIGHBORS[31658]""]"	chr7:107613432-chr7:107661639	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
BBOX1-AS1--GLDN	2	0	1.0	0.0	ONLY_REF_SPLICE	BBOX1-AS1^ENSG00000254560.6	chr11:27220047:-	GLDN^ENSG00000186417.14	chr15:51377449:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:19769:22971,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:29776:9057	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:27220047-chr15:51377449	False			0	Read count too low: 2 < 8	FAIL	2
B4GALT4--IGSF11	2	0	2.0	0.0	ONLY_REF_SPLICE	B4GALT4^ENSG00000121578.13	chr3:119216240:-	IGSF11^ENSG00000144847.13	chr3:118930275:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:22083:16470,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:14518:10374	.	YES_LDAS	0.0068	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:0.07Mb]"",""NEIGHBORS[65664]""]"	chr3:119216240-chr3:118930275	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
ATXN2--CSTF1	2	0	2.0	0.0	ONLY_REF_SPLICE	ATXN2^ENSG00000204842.18	chr12:111597916:-	CSTF1^ENSG00000101138.12	chr20:56397207:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2173:44476:28352,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2477:35682:4909	.	YES_LDAS	0.0068	GT	1.9656	AG	1.6895	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:111597916-chr20:56397207	False			0	Read count too low: 2 < 8	FAIL	2
ARMC4--AL355493.1	2	0	1.0	0.0	ONLY_REF_SPLICE	ARMC4^ENSG00000169126.16	chr10:27961568:-	AL355493.1^ENSG00000215409.4	chr10:27331566:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1146:47760:14732,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2288:20699:29207	.	NO_LDAS	0.0034	GT	1.5058	AG	1.7968	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:0.43Mb]""]"	chr10:27961568-chr10:27331566	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
ARLNC1--CDYL2	2	0	2.0	0.0	ONLY_REF_SPLICE	ARLNC1^ENSG00000260896.6	chr16:80840119:-	CDYL2^ENSG00000166446.15	chr16:80685129:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:29040:1392,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:22681:16385	.	YES_LDAS	0.0068	GT	1.7465	AG	1.585	"[""INTRACHROMOSOMAL[chr16:0.02Mb]"",""NEIGHBORS[21476]""]"	chr16:80840119-chr16:80685129	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
APBB3--TKFC	2	0	2.0	0.0	ONLY_REF_SPLICE	APBB3^ENSG00000113108.20	chr5:140561018:-	TKFC^ENSG00000149476.16	chr11:61342461:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1311:20958:23266,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2172:32956:20113	.	NO_LDAS	0.0068	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr5--chr11]""]"	chr5:140561018-chr11:61342461	False			0	Read count too low: 2 < 8	FAIL	2
AL670729.1--BEND6	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AL670729.1^ENSG00000270094.1	chr1:228395806:+	BEND6^ENSG00000151917.18	chr6:56992380:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:14688:8034,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2324:5409:24639	.	YES_LDAS	0.0068	GT	1.8892	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:228395806-chr6:56992380	False			0	Read count too low: 2 < 8	FAIL	2
AL445250.1--AC110079.1	2	0	2.0	0.0	ONLY_REF_SPLICE	AL445250.1^ENSG00000225096.3	chr6:57961742:+	AC110079.1^ENSG00000260404.3	chr4:118595912:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2319:48852:18838,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:32049:12154	.	NO_LDAS	0.0068	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr4]""]"	chr6:57961742-chr4:118595912	False			0	Read count too low: 2 < 8	FAIL	2
AL358790.1--PLS3	2	0	1.0	0.0	ONLY_REF_SPLICE	AL358790.1^ENSG00000282772.1	chr10:102851508:-	PLS3^ENSG00000102024.18	chrX:115610243:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:45503:3032,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:45980:15433	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr10--chrX]""]"	chr10:102851508-chrX:115610243	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AKR1C1--AKR1E2	2	0	0.67	0.0	ONLY_REF_SPLICE	AKR1C1^ENSG00000187134.14	chr10:4972749:+	AKR1E2^ENSG00000165568.18	chr10:4830675:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:25602:28898,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:14939:29515	.	NO_LDAS	0.0023	GT	1.7819	AG	1.9899	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr10:0.12Mb]""]"	chr10:4972749-chr10:4830675	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	2
AGBL5--ATRAID	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AGBL5^ENSG00000084693.16	chr2:27051950:+	ATRAID^ENSG00000138085.17	chr2:27215321:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14583:11832,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2164:14599:11832	.	NO_LDAS	0.0068	GT	1.4256	AG	1.9899	"[""INTRACHROMOSOMAL[chr2:0.14Mb]""]"	chr2:27051950-chr2:27215321	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	2
AF064860.2--IGSF5	2	0	2.0	0.0	ONLY_REF_SPLICE	AF064860.2^ENSG00000231713.2	chr21:39727992:+	IGSF5^ENSG00000183067.5	chr21:39765535:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:42550:7362,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:23490:24597	.	YES_LDAS	0.0068	GT	1.7465	AG	1.7056	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""NEIGHBORS[14727]""]"	chr21:39727992-chr21:39765535	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC127502.3--AC135983.2	2	0	1.0	0.0	ONLY_REF_SPLICE	AC127502.3^ENSG00000283345.1	chr15:30513698:+	AC135983.2^ENSG00000223509.8	chr15:32533368:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:8394:23560,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2380:45010:6857	.	YES_LDAS	0.0034	GT	1.5329	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:2.01Mb]""]"	chr15:30513698-chr15:32533368	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC099654.11--AL627309.5	2	0	0.4	0.0	ONLY_REF_SPLICE	AC099654.11^ENSG00000286436.1	chr7:57148471:+	AL627309.5^ENSG00000241860.7	chr1:173862:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1206:46895:15811,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1142:31386:26082	.	NO_LDAS	0.0014	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:57148471-chr1:173862	False			0	Read count too low: 2 < 8	FAIL	2
AC097500.1--FSIP2-AS1	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC097500.1^ENSG00000287129.1	chr2:185950644:-	FSIP2-AS1^ENSG00000231646.6	chr2:185800148:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1182:34209:26628,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:47534:11958	.	YES_LDAS	0.0068	GT	1.9899	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.15Mb]""]"	chr2:185950644-chr2:185800148	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC097493.3--AC107918.4	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC097493.3^ENSG00000284648.1	chr4:9532647:+	AC107918.4^ENSG00000284610.1	chr8:12015072:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:41086:3144,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2322:12399:12644	.	YES_LDAS	0.0068	GT	1.4566	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr8]""]"	chr4:9532647-chr8:12015072	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC092032.3--PMS2CL	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC092032.3^ENSG00000288633.1	chr7:4996798:+	PMS2CL^ENSG00000187953.10	chr7:6731897:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2274:45293:2892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1289:48577:8973	.	YES_LDAS	0.0068	GT	1.5546	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:1.71Mb]""]"	chr7:4996798-chr7:6731897	False			0	Read count too low: 2 < 8	FAIL	2
AC087280.2--DCHS1	2	0	2.0	0.0	ONLY_REF_SPLICE	AC087280.2^ENSG00000283415.2	chr11:6924498:-	DCHS1^ENSG00000166341.9	chr11:6641733:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1483:1752:10570,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2431:29808:19706	.	NO_LDAS	0.0068	GT	1.6895	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.17Mb]""]"	chr11:6924498-chr11:6641733	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC079781.4--ENPP7P3	2	0	0.25	0.0	INCL_NON_REF_SPLICE	AC079781.4^ENSG00000284627.1	chr7:97928082:-	ENPP7P3^ENSG00000248618.1	chr3:130167943:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1141:23652:25101,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2337:13596:27273	.	YES_LDAS	0.0008	GT	1.4566	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr3]""]"	chr7:97928082-chr3:130167943	False			0	Read count too low: 2 < 8	FAIL	2
AC026765.3--CBFA2T2	2	0	2.0	0.0	ONLY_REF_SPLICE	AC026765.3^ENSG00000257817.2	chr12:114748210:+	CBFA2T2^ENSG00000078699.22	chr20:33640341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:21387:19692,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:28401:8300	.	YES_LDAS	0.0068	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:114748210-chr20:33640341	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC025171.3--UBE2Q2P2	2	0	2.0	0.0	ONLY_REF_SPLICE	AC025171.3^ENSG00000251131.2	chr5:43018672:+	UBE2Q2P2^ENSG00000259429.5	chr15:82419980:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:3217:5540,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1295:4309:11860	.	YES_LDAS	0.0068	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:43018672-chr15:82419980	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC021851.1--NUP35	2	0	2.0	0.0	ONLY_REF_SPLICE	AC021851.1^ENSG00000272800.3	chr2:183182680:+	NUP35^ENSG00000163002.13	chr2:183151508:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1282:25302:16806,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:38335:3256	.	YES_LDAS	0.0068	GT	1.8062	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]"	chr2:183182680-chr2:183151508	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC015712.1--CERS5	2	0	2.0	0.0	ONLY_REF_SPLICE	AC015712.1^ENSG00000232386.9	chr15:100855348:+	CERS5^ENSG00000139624.14	chr12:50130694:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:3985:2724,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2187:49216:22999	.	NO_LDAS	0.0068	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr15--chr12]""]"	chr15:100855348-chr12:50130694	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC012313.4--ZNF584	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC012313.4^ENSG00000268543.1	chr19:58419327:+	ZNF584^ENSG00000171574.18	chr19:58415524:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:22867:4237,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2119:42202:4657	.	YES_LDAS	0.0068	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[233]""]"	chr19:58419327-chr19:58415524	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC010974.2--GPR39	2	0	2.0	0.0	ONLY_REF_SPLICE	AC010974.2^ENSG00000286068.1	chr2:132686465:+	GPR39^ENSG00000183840.7	chr2:132645101:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2462:10886:21934,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:51918:14116	.	YES_LDAS	0.0068	GT	1.9656	AG	1.7056	"[""INTRACHROMOSOMAL[chr2:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[38642]""]"	chr2:132686465-chr2:132645101	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
AC005357.2--CCNYL1	2	0	2.0	0.0	ONLY_REF_SPLICE	AC005357.2^ENSG00000267623.3	chr19:27970524:+	CCNYL1^ENSG00000163249.13	chr2:207724800:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:19923:6759,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:4827:22957	.	NO_LDAS	0.0068	GT	1.9086	AG	1.7465	"[""INTERCHROMOSOMAL[chr19--chr2]""]"	chr19:27970524-chr2:207724800	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	2
AC004923.1--ENPP7P7	2	0	2.0	0.0	INCL_NON_REF_SPLICE	AC004923.1^ENSG00000254610.3	chr11:67955482:-	ENPP7P7^ENSG00000273819.1	chr11:67812753:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1197:40334:16778,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2272:37785:23238	.	YES_LDAS	0.0068	GT	1.4566	AG	1.5219	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[61196]""]"	chr11:67955482-chr11:67812753	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
AC004784.1--CD177	2	0	2.0	0.0	ONLY_REF_SPLICE	AC004784.1^ENSG00000282943.1	chr19:43101700:+	CD177^ENSG00000204936.10	chr19:43354207:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:42793:26923,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1188:15408:24471	.	YES_LDAS	0.0068	GT	1.8892	AG	1.8062	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr19:0.18Mb]""]"	chr19:43101700-chr19:43354207	False			0	Read count too low: 2 < 8	FAIL	2
SULT1A3--SLX1A	2	1	0.5	0.25	INCL_NON_REF_SPLICE	SULT1A3^ENSG00000261052.6	chr16:30203988:+	SLX1A^ENSG00000132207.18	chr16:30194744:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1410:10595:19356,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:5684:8805	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:28741:25003	YES_LDAS	0.0025	GT	1.7968	AG	1.7819	"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1667]""]"	chr16:30203988-chr16:30194744	False			0	Read count too low: 3 < 8	FAIL	3
AC073529.1--MID1	2	1	2.0	0.17	ONLY_REF_SPLICE	AC073529.1^ENSG00000234129.8	chrX:11038603:-	MID1^ENSG00000101871.16	chrX:10567603:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:38627:2892,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2375:47388:14844	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:9592:21962	YES_LDAS	0.0074	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""NEIGHBORS[13924]""]"	chrX:11038603-chrX:10567603	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	3
ZXDB--ERP44	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZXDB^ENSG00000198455.5	chrX:57593599:+	ERP44^ENSG00000023318.8	chr9:99979906:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1165:10134:19819	.	YES_LDAS	0.0034	GT	1.5058	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr9]""]"	chrX:57593599-chr9:99979906	False			0	Read count too low: 1 < 8	FAIL	1
ZUP1--RSPH14	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZUP1^ENSG00000153975.10	chr6:116645860:-	RSPH14^ENSG00000100218.12	chr22:23061868:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2164:42914:4321	.	NO_LDAS	0.0034	GT	1.9219	AG	1.8062	"[""INTERCHROMOSOMAL[chr6--chr22]""]"	chr6:116645860-chr22:23061868	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZSCAN9--HARS2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZSCAN9^ENSG00000137185.13	chr6:28227057:+	HARS2^ENSG00000112855.17	chr5:140697989:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:31127:23280	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr6--chr5]""]"	chr6:28227057-chr5:140697989	False			0	Read count too low: 1 < 8	FAIL	1
ZNRD2--SLC50A1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNRD2^ENSG00000173465.8	chr11:65570970:+	SLC50A1^ENSG00000169241.19	chr1:155137561:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1406:43578:13289	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8062	"[""INTERCHROMOSOMAL[chr11--chr1]""]"	chr11:65570970-chr1:155137561	False			0	Read count too low: 1 < 8	FAIL	1
ZNF90P1--RINL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF90P1^ENSG00000241738.1	chr3:101358777:+	RINL^ENSG00000187994.14	chr19:38871870:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:41458:26657	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr19]""]"	chr3:101358777-chr19:38871870	False			0	Read count too low: 1 < 8	FAIL	1
ZNF852--NTRK1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF852^ENSG00000178917.17	chr3:44499894:-	NTRK1^ENSG00000198400.13	chr1:156865615:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:32033:1897	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:44499894-chr1:156865615	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF852--NTRK1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF852^ENSG00000178917.17	chr3:44499474:-	NTRK1^ENSG00000198400.13	chr1:156865615:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:1485:1897	.	YES_LDAS	0.0034	GT	1.9219	AG	1.5656	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:44499474-chr1:156865615	False			0	Read count too low: 1 < 8	FAIL	1
ZNF814--GLB1L2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF814^ENSG00000204514.10	chr19:57859367:-	GLB1L2^ENSG00000149328.15	chr11:134375713:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1359:12027:2836	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTERCHROMOSOMAL[chr19--chr11]""]"	chr19:57859367-chr11:134375713	False			0	Read count too low: 1 < 8	FAIL	1
ZNF775--AC073111.3	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF775^ENSG00000196456.13	chr7:150388501:+	AC073111.3^ENSG00000284691.1	chr7:150407584:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:29825:3592	.	NO_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[2072]""]"	chr7:150388501-chr7:150407584	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZNF75D--AC234771.4	1	0	0.5	0.0	ONLY_REF_SPLICE	ZNF75D^ENSG00000186376.15	chrX:135341768:-	AC234771.4^ENSG00000236491.1	chrX:135193082:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:44799:24569	.	YES_LDAS	0.0017	GT	1.8062	AG	1.9899	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chrX:0.05Mb]"",""NEIGHBORS[54241]""]"	chrX:135341768-chrX:135193082	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZNF749--AC095032.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF749^ENSG00000186230.7	chr19:57435667:+	AC095032.1^ENSG00000224613.7	chr1:103469370:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:23984:13317	.	NO_LDAS	0.0034	GT	1.7056	AG	1.7232	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:57435667-chr1:103469370	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF720--AC098826.1	1	0	0.17	0.0	ONLY_REF_SPLICE	ZNF720^ENSG00000197302.10	chr16:31723353:+	AC098826.1^ENSG00000225594.1	chr2:132087289:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:25618:12308	.	NO_LDAS	0.0006	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr2]""]"	chr16:31723353-chr2:132087289	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
ZNF708--ZNF766	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF708^ENSG00000182141.10	chr19:21329210:-	ZNF766^ENSG00000196214.11	chr19:52283285:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2333:8969:21920	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr19:30.94Mb]""]"	chr19:21329210-chr19:52283285	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF700--PLEKHA1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF700^ENSG00000196757.8	chr19:11925273:+	PLEKHA1^ENSG00000107679.14	chr10:122393181:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1276:3702:15741	.	YES_LDAS	0.0034	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr10]""]"	chr19:11925273-chr10:122393181	False			0	Read count too low: 1 < 8	FAIL	1
ZNF668--GSDME	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF668^ENSG00000167394.13	chr16:31064122:-	GSDME^ENSG00000105928.16	chr7:24705041:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2244:44613:17156	.	YES_LDAS	0.0034	GT	1.9656	AG	1.6729	"[""INTERCHROMOSOMAL[chr16--chr7]""]"	chr16:31064122-chr7:24705041	False			0	Read count too low: 1 < 8	FAIL	1
ZNF665--FAM76A	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF665^ENSG00000197497.11	chr19:53191719:-	FAM76A^ENSG00000009780.16	chr1:27732603:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:3362:25522	.	NO_LDAS	0.0034	GC	1.9329	AG	1.371	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:53191719-chr1:27732603	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
ZNF653--ECSIT	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF653^ENSG00000161914.10	chr19:11505488:-	ECSIT^ENSG00000130159.14	chr19:11514221:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:28603:21318	.	YES_LDAS	0.0034	GT	1.4295	AG	1.4566	"[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[90]""]"	chr19:11505488-chr19:11514221	False			0	Read count too low: 1 < 8	FAIL	1
ZNF644--LINC02609	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF644^ENSG00000122482.21	chr1:90937485:-	LINC02609^ENSG00000233593.10	chr1:90789487:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1287:13806:14130	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:0.06Mb]"",""NEIGHBORS[63640]""]"	chr1:90937485-chr1:90789487	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ZNF644--BARHL2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF644^ENSG00000122482.21	chr1:90937485:-	BARHL2^ENSG00000143032.8	chr1:90714756:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:7100:9772	.	YES_LDAS	0.0034	GT	1.9899	AG	1.2867	"[""INTRACHROMOSOMAL[chr1:0.20Mb]""]"	chr1:90937485-chr1:90714756	False			0	Read count too low: 1 < 8	FAIL	1
ZNF627--LINC01844	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF627^ENSG00000198551.10	chr19:11616837:+	LINC01844^ENSG00000236714.3	chr5:142756797:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:3702:11958	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8062	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:11616837-chr5:142756797	False			0	Read count too low: 1 < 8	FAIL	1
ZNF613--ZNF684	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF613^ENSG00000176024.18	chr19:51944782:+	ZNF684^ENSG00000117010.17	chr1:40547341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:25941:29151	.	NO_LDAS	0.0034	GT	1.9219	AG	1.7465	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:51944782-chr1:40547341	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF589--HEXD	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF589^ENSG00000164048.14	chr3:48247677:+	HEXD^ENSG00000169660.17	chr17:82428030:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2288:44379:21542	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:48247677-chr17:82428030	False			0	Read count too low: 1 < 8	FAIL	1
ZNF587B--ZNF154	1	0	0.33	0.0	ONLY_REF_SPLICE	ZNF587B^ENSG00000269343.9	chr19:57839149:+	ZNF154^ENSG00000179909.15	chr19:57704979:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1490:2917:29431	.	YES_LDAS	0.0011	GT	1.7819	AG	1.9329	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]"	chr19:57839149-chr19:57704979	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
ZNF587B--ZNF154	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF587B^ENSG00000269343.9	chr19:57840908:+	ZNF154^ENSG00000179909.15	chr19:57704979:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:39201:24260	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.11Mb]""]"	chr19:57840908-chr19:57704979	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
ZNF577--CDC27	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF577^ENSG00000161551.14	chr19:51839893:-	CDC27^ENSG00000004897.12	chr17:47132374:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2459:13564:15839	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTERCHROMOSOMAL[chr19--chr17]""]"	chr19:51839893-chr17:47132374	False			0	Read count too low: 1 < 8	FAIL	1
ZNF573--TBL2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF573^ENSG00000189144.15	chr19:37758476:-	TBL2^ENSG00000106638.17	chr7:73571341:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2318:48415:17997	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr7]""]"	chr19:37758476-chr7:73571341	False			0	Read count too low: 1 < 8	FAIL	1
ZNF559--ZNF177	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF559^ENSG00000188321.14	chr19:9341184:+	ZNF177^ENSG00000188629.13	chr19:9364862:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1340:35035:13261	.	NO_LDAS	0.0034	GT	1.5301	AG	1.8062	"[""ConjoinG"",""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[11858]""]"	chr19:9341184-chr19:9364862	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF541--AC011005.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF541^ENSG00000118156.12	chr19:47532192:-	AC011005.1^ENSG00000230626.4	chr7:129126662:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:49750:12910	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8062	"[""INTERCHROMOSOMAL[chr19--chr7]""]"	chr19:47532192-chr7:129126662	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF525--SAXO2	1	0	0.25	0.0	INCL_NON_REF_SPLICE	ZNF525^ENSG00000203326.12	chr19:53486758:+	SAXO2^ENSG00000188659.9	chr15:82283854:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193	.	NO_LDAS	0.0008	GT	1.8062	AG	1.9656	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:53486758-chr15:82283854	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF525--SAXO2	1	0	0.25	0.0	INCL_NON_REF_SPLICE	ZNF525^ENSG00000203326.12	chr19:53402191:+	SAXO2^ENSG00000188659.9	chr15:82283854:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193	.	NO_LDAS	0.0008	GT	1.8062	AG	1.9656	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:53402191-chr15:82283854	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF525--SAXO2	1	0	0.25	0.0	INCL_NON_REF_SPLICE	ZNF525^ENSG00000203326.12	chr19:53375896:+	SAXO2^ENSG00000188659.9	chr15:82283854:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:33498:18193	.	NO_LDAS	0.0008	GT	1.8062	AG	1.9656	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:53375896-chr15:82283854	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF519--FAM122C	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF519^ENSG00000175322.12	chr18:14124350:-	FAM122C^ENSG00000156500.15	chrX:134845205:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1477:36636:17857	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8323	"[""INTERCHROMOSOMAL[chr18--chrX]""]"	chr18:14124350-chrX:134845205	False			0	Read count too low: 1 < 8	FAIL	1
ZNF518B--EXOC8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF518B^ENSG00000178163.8	chr4:10444020:-	EXOC8^ENSG00000116903.7	chr1:231337836:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:29420:29431	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:10444020-chr1:231337836	False			0	Read count too low: 1 < 8	FAIL	1
ZNF500--LMAN1L	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF500^ENSG00000103199.14	chr16:4765565:-	LMAN1L^ENSG00000140506.17	chr15:74818718:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1252:38012:12140	.	YES_LDAS	0.0034	GT	1.5656	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr15]""]"	chr16:4765565-chr15:74818718	False			0	Read count too low: 1 < 8	FAIL	1
ZNF484--AC025839.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF484^ENSG00000127081.14	chr9:92855811:-	AC025839.1^ENSG00000287677.2	chr8:141659226:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:3111:1967	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr9--chr8]""]"	chr9:92855811-chr8:141659226	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZNF37A--AKR1E2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF37A^ENSG00000075407.18	chr10:38096632:+	AKR1E2^ENSG00000165568.18	chr10:4830675:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1301:7747:14116	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9899	"[""INTRACHROMOSOMAL[chr10:33.25Mb]""]"	chr10:38096632-chr10:4830675	False			0	Read count too low: 1 < 8	FAIL	1
ZNF343--PRDM7	1	0	0.5	0.0	ONLY_REF_SPLICE	ZNF343^ENSG00000088876.13	chr20:2492699:-	PRDM7^ENSG00000126856.16	chr16:90058534:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2252:6720:29683	.	NO_LDAS	0.0017	GT	1.7968	AG	1.4566	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr20--chr16]""]"	chr20:2492699-chr16:90058534	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF337--ZNF80	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF337^ENSG00000130684.14	chr20:25675979:-	ZNF80^ENSG00000174255.8	chr3:114236849:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:5320:22187	.	NO_LDAS	0.0034	GT	1.5301	AG	1.9899	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr20--chr3]""]"	chr20:25675979-chr3:114236849	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF331--MAP3K12	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF331^ENSG00000130844.19	chr19:53535861:+	MAP3K12^ENSG00000139625.13	chr12:53481379:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1168:30868:2429	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTERCHROMOSOMAL[chr19--chr12]""]"	chr19:53535861-chr12:53481379	False			0	Read count too low: 1 < 8	FAIL	1
ZNF280D--AC090517.5	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF280D^ENSG00000137871.21	chr15:56689041:-	AC090517.5^ENSG00000285331.2	chr15:56847481:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1245:28644:7292	.	NO_LDAS	0.0034	GT	1.6049	AG	1.3996	"[""INTRACHROMOSOMAL[chr15:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[61374]""]"	chr15:56689041-chr15:56847481	False			0	Read count too low: 1 < 8	FAIL	1
ZNF268--ZNF141	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF268^ENSG00000090612.22	chr12:133188072:+	ZNF141^ENSG00000131127.14	chr4:372664:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:39937:5610	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:133188072-chr4:372664	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF257--PTCD2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF257^ENSG00000197134.13	chr19:22060628:+	PTCD2^ENSG00000049883.15	chr5:72335018:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:17318:23994	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9219	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:22060628-chr5:72335018	False			0	Read count too low: 1 < 8	FAIL	1
ZNF251--NLRP2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF251^ENSG00000198169.9	chr8:144755405:-	NLRP2^ENSG00000022556.16	chr19:54994269:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:28700:24344	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr19]""]"	chr8:144755405-chr19:54994269	False			0	Read count too low: 1 < 8	FAIL	1
ZNF248--ZNF800	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF248^ENSG00000198105.16	chr10:37833025:-	ZNF800^ENSG00000048405.10	chr7:127373479:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:3532:22985	.	YES_LDAS	0.0034	GT	0.9183	AG	1.8062	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:37833025-chr7:127373479	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
ZNF248--C1QTNF12	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF248^ENSG00000198105.16	chr10:37858005:-	C1QTNF12^ENSG00000184163.3	chr1:1244497:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:3443:3943	.	NO_LDAS	0.0034	GT	1.2419	AG	1.7232	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:37858005-chr1:1244497	False			0	Read count too low: 1 < 8	FAIL	1
ZNF215--SDF2	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF215^ENSG00000149054.16	chr11:6955782:+	SDF2^ENSG00000132581.10	chr17:28655483:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2328:36661:27287	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8295	"[""INTERCHROMOSOMAL[chr11--chr17]""]"	chr11:6955782-chr17:28655483	False			0	Read count too low: 1 < 8	FAIL	1
ZNF215--EPB41L4A-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF215^ENSG00000149054.16	chr11:6955782:+	EPB41L4A-AS1^ENSG00000224032.7	chr5:112161249:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:49815:14256	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chr5]""]"	chr11:6955782-chr5:112161249	False			0	Read count too low: 1 < 8	FAIL	1
ZNF175--SNIP1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZNF175^ENSG00000105497.8	chr19:51573401:+	SNIP1^ENSG00000163877.11	chr1:37540755:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1209:27123:2499	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:51573401-chr1:37540755	False			0	Read count too low: 1 < 8	FAIL	1
ZNF101--HBEGF	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZNF101^ENSG00000181896.12	chr19:19668972:+	HBEGF^ENSG00000113070.8	chr5:140346036:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:38093:19931	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9219	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:19668972-chr5:140346036	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZFYVE26--VIPAS39	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFYVE26^ENSG00000072121.17	chr14:67775860:-	VIPAS39^ENSG00000151445.16	chr14:77457365:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2307:3322:18193	.	YES_LDAS	0.0034	GT	1.7056	AG	1.9086	"[""INTRACHROMOSOMAL[chr14:9.61Mb]""]"	chr14:67775860-chr14:77457365	False			0	Read count too low: 1 < 8	FAIL	1
ZFPM2-AS1--RIOK3	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFPM2-AS1^ENSG00000251003.9	chr8:106060381:-	RIOK3^ENSG00000101782.15	chr18:23474948:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:43586:18880	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr8--chr18]""]"	chr8:106060381-chr18:23474948	False			0	Read count too low: 1 < 8	FAIL	1
ZFPM2-AS1--MRPS28	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFPM2-AS1^ENSG00000251003.9	chr8:106060381:-	MRPS28^ENSG00000147586.10	chr8:79919148:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:41005:27413	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6402	"[""INTRACHROMOSOMAL[chr8:25.52Mb]""]"	chr8:106060381-chr8:79919148	False			0	Read count too low: 1 < 8	FAIL	1
ZFP90--RNF168	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZFP90^ENSG00000184939.16	chr16:68558568:+	RNF168^ENSG00000163961.4	chr3:196503157:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2291:7464:20295	.	YES_LDAS	0.0034	GT	1.9086	AG	1.6049	"[""INTERCHROMOSOMAL[chr16--chr3]""]"	chr16:68558568-chr3:196503157	False			0	Read count too low: 1 < 8	FAIL	1
ZFP69B--ANKRD12	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFP69B^ENSG00000187801.15	chr1:40457071:+	ANKRD12^ENSG00000101745.17	chr18:9263790:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:13920:24947	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5058	"[""INTERCHROMOSOMAL[chr1--chr18]""]"	chr1:40457071-chr18:9263790	False			0	Read count too low: 1 < 8	FAIL	1
ZFP30--MYL6B	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFP30^ENSG00000120784.16	chr19:37644610:-	MYL6B^ENSG00000196465.10	chr12:56157468:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1251:1081:19833	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7056	"[""INTERCHROMOSOMAL[chr19--chr12]""]"	chr19:37644610-chr12:56157468	False			0	Read count too low: 1 < 8	FAIL	1
ZFAND6--MTHFS	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFAND6^ENSG00000086666.19	chr15:80122800:+	MTHFS^ENSG00000136371.11	chr15:79845442:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1388:13815:7558	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.16Mb]""]"	chr15:80122800-chr15:79845442	False			0	Read count too low: 1 < 8	FAIL	1
ZFAND6--FNTA	1	0	1.0	0.0	ONLY_REF_SPLICE	ZFAND6^ENSG00000086666.19	chr15:80122800:+	FNTA^ENSG00000168522.13	chr8:43064101:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1201:49386:1154	.	YES_LDAS	0.0034	GT	1.8323	AG	1.5301	"[""INTERCHROMOSOMAL[chr15--chr8]""]"	chr15:80122800-chr8:43064101	False			0	Read count too low: 1 < 8	FAIL	1
ZDHHC17--NPIPB10P	1	0	0.06	0.0	ONLY_REF_SPLICE	ZDHHC17^ENSG00000186908.15	chr12:76769201:+	NPIPB10P^ENSG00000196796.5	chr16:29050502:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:45924:10010	.	YES_LDAS	0.0002	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr12--chr16]""]"	chr12:76769201-chr16:29050502	False			0	Read count too low: 1 < 8	FAIL	1
ZDHHC14--PREP	1	0	1.0	0.0	ONLY_REF_SPLICE	ZDHHC14^ENSG00000175048.17	chr6:157382266:+	PREP^ENSG00000085377.15	chr6:105288894:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1127:32438:2625	.	YES_LDAS	0.0034	GT	1.7056	AG	1.7819	"[""INTRACHROMOSOMAL[chr6:51.93Mb]""]"	chr6:157382266-chr6:105288894	False			0	Read count too low: 1 < 8	FAIL	1
ZCCHC17--MRPL19	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZCCHC17^ENSG00000121766.16	chr1:31346657:+	MRPL19^ENSG00000115364.14	chr2:75655064:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:13483:5582	.	NO_LDAS	0.0034	GC	1.2729	AG	1.6729	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:31346657-chr2:75655064	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ZC3H8--IPPK	1	0	1.0	0.0	ONLY_REF_SPLICE	ZC3H8^ENSG00000144161.13	chr2:112250191:-	IPPK^ENSG00000127080.10	chr9:92619565:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1109:27778:20225	.	NO_LDAS	0.0034	GT	1.3383	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr9]""]"	chr2:112250191-chr9:92619565	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB8OS--CHRNA5	1	0	1.0	0.0	ONLY_REF_SPLICE	ZBTB8OS^ENSG00000176261.15	chr1:32650433:-	CHRNA5^ENSG00000169684.13	chr15:78593092:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2485:16832:5414	.	YES_LDAS	0.0034	GT	1.7819	AG	1.5219	"[""INTERCHROMOSOMAL[chr1--chr15]""]"	chr1:32650433-chr15:78593092	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB8A--ARHGEF5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZBTB8A^ENSG00000160062.15	chr1:32605640:+	ARHGEF5^ENSG00000050327.15	chr7:144363625:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:33295:7278	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:32605640-chr7:144363625	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB43--TSG101	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZBTB43^ENSG00000169155.10	chr9:126805178:+	TSG101^ENSG00000074319.13	chr11:18506899:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:48205:27946	.	YES_LDAS	0.0034	GT	1.231	AG	1.9656	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:126805178-chr11:18506899	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB41--C4BPAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ZBTB41^ENSG00000177888.8	chr1:197172160:-	C4BPAP1^ENSG00000224462.2	chr1:207178661:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:25618:17240	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:9.96Mb]""]"	chr1:197172160-chr1:207178661	False			0	Read count too low: 1 < 8	FAIL	1
ZBTB34--RALGPS1	1	0	1.0	0.0	ONLY_REF_SPLICE	ZBTB34^ENSG00000177125.5	chr9:126860739:+	RALGPS1^ENSG00000136828.19	chr9:126962225:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1448:10449:14144	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr9:0.03Mb]"",""NEIGHBORS[28896]""]"	chr9:126860739-chr9:126962225	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
Z95114.1--GLUD2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	Z95114.1^ENSG00000279217.1	chr22:36074848:+	GLUD2^ENSG00000182890.5	chrX:121047966:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2236:9389:24555	.	NO_LDAS	0.0034	GT	1.053	AG	1.5058	"[""INTERCHROMOSOMAL[chr22--chrX]""]"	chr22:36074848-chrX:121047966	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
YTHDC2--SRFBP1	1	0	1.0	0.0	ONLY_REF_SPLICE	YTHDC2^ENSG00000047188.16	chr5:113515362:+	SRFBP1^ENSG00000151304.6	chr5:121974196:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:21807:29697	.	YES_LDAS	0.0034	GT	1.8295	AG	1.5656	"[""INTRACHROMOSOMAL[chr5:8.37Mb]""]"	chr5:113515362-chr5:121974196	False			0	Read count too low: 1 < 8	FAIL	1
YARS2--YIPF3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	YARS2^ENSG00000139131.13	chr12:32755144:-	YIPF3^ENSG00000137207.12	chr6:43513165:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1434:4948:18936	.	NO_LDAS	0.0034	AT	1.6402	AC	1.8256	"[""INTERCHROMOSOMAL[chr12--chr6]""]"	chr12:32755144-chr6:43513165	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
XYLB--SLC22A14	1	0	1.0	0.0	ONLY_REF_SPLICE	XYLB^ENSG00000093217.11	chr3:38348632:+	SLC22A14^ENSG00000144671.10	chr3:38306027:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1202:39719:3971	.	YES_LDAS	0.0034	GT	1.9219	AG	1.5329	"[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28185]""]"	chr3:38348632-chr3:38306027	False			0	Read count too low: 1 < 8	FAIL	1
XYLB--AC006019.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	XYLB^ENSG00000093217.11	chr3:38395563:+	AC006019.1^ENSG00000203335.5	chr7:154055672:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:43998:5386	.	NO_LDAS	0.0017	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:38395563-chr7:154055672	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WWOX--PAEP	1	0	1.0	0.0	ONLY_REF_SPLICE	WWOX^ENSG00000186153.17	chr16:78164289:+	PAEP^ENSG00000122133.17	chr9:135566192:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:50487:6311	.	YES_LDAS	0.0034	GT	1.5656	AG	1.9329	"[""INTERCHROMOSOMAL[chr16--chr9]""]"	chr16:78164289-chr9:135566192	False			0	Read count too low: 1 < 8	FAIL	1
WWOX--AC090771.2	1	0	1.0	0.0	ONLY_REF_SPLICE	WWOX^ENSG00000186153.17	chr16:78164289:+	AC090771.2^ENSG00000267686.2	chr18:60132875:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2257:38796:18095	.	NO_LDAS	0.0034	GT	1.5656	AG	1.9329	"[""INTERCHROMOSOMAL[chr16--chr18]""]"	chr16:78164289-chr18:60132875	False			0	Read count too low: 1 < 8	FAIL	1
WNT9A--CNN3	1	0	1.0	0.0	ONLY_REF_SPLICE	WNT9A^ENSG00000143816.8	chr1:227924138:-	CNN3^ENSG00000117519.16	chr1:94903524:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2181:26144:24793	.	YES_LDAS	0.0034	GC	1.7968	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:132.99Mb]""]"	chr1:227924138-chr1:94903524	False			0	Read count too low: 1 < 8	FAIL	1
WDSUB1--PCNX4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	WDSUB1^ENSG00000196151.11	chr2:159236037:-	PCNX4^ENSG00000126773.13	chr14:60114700:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2130:39605:16946	.	YES_LDAS	0.0034	GT	1.4566	AG	1.5301	"[""INTERCHROMOSOMAL[chr2--chr14]""]"	chr2:159236037-chr14:60114700	False			0	Read count too low: 1 < 8	FAIL	1
WDR74--MUC19	1	0	1.0	0.0	INCL_NON_REF_SPLICE	WDR74^ENSG00000133316.16	chr11:62833788:-	MUC19^ENSG00000205592.15	chr12:40488012:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:42146:16526	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr11--chr12]""]"	chr11:62833788-chr12:40488012	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WDR74--AP004290.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	WDR74^ENSG00000133316.16	chr11:62836023:-	AP004290.1^ENSG00000236583.1	chr8:99233928:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:35965:28688	.	NO_LDAS	0.0011	GT	1.7465	AG	1.9329	"[""INTERCHROMOSOMAL[chr11--chr8]""]"	chr11:62836023-chr8:99233928	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WDR74--AP000320.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	WDR74^ENSG00000133316.16	chr11:62836023:-	AP000320.1^ENSG00000225555.2	chr21:34354198:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:35965:28688	.	NO_LDAS	0.0011	GT	1.7465	AG	1.9329	"[""INTERCHROMOSOMAL[chr11--chr21]""]"	chr11:62836023-chr21:34354198	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WDR61--DHRS4	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR61^ENSG00000140395.9	chr15:78294946:-	DHRS4^ENSG00000157326.19	chr14:23959902:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:45511:19861	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9656	"[""INTERCHROMOSOMAL[chr15--chr14]""]"	chr15:78294946-chr14:23959902	False			0	Read count too low: 1 < 8	FAIL	1
WDR49--AC106895.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	WDR49^ENSG00000174776.11	chr3:167554650:-	AC106895.2^ENSG00000251216.2	chr4:173982968:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:17188:9309	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr4]""]"	chr3:167554650-chr4:173982968	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WDR41--MOCS2	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR41^ENSG00000164253.14	chr5:77449760:-	MOCS2^ENSG00000164172.20	chr5:53107221:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:38376:14816	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr5:24.32Mb]""]"	chr5:77449760-chr5:53107221	False			0	Read count too low: 1 < 8	FAIL	1
WDR4--ZNF780B	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR4^ENSG00000160193.12	chr21:42873603:-	ZNF780B^ENSG00000128000.17	chr19:40050377:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1210:3856:12588	.	YES_LDAS	0.0034	GT	1.9329	AG	1.4566	"[""INTERCHROMOSOMAL[chr21--chr19]""]"	chr21:42873603-chr19:40050377	False			0	Read count too low: 1 < 8	FAIL	1
WDR4--PKNOX1	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR4^ENSG00000160193.12	chr21:42850041:-	PKNOX1^ENSG00000160199.15	chr21:43004326:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1279:16695:7165	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr21:0.09Mb]"",""LOCAL_INVERSION:-:+:[94942]""]"	chr21:42850041-chr21:43004326	False			0	Read count too low: 1 < 8	FAIL	1
WDR4--CCNG2	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR4^ENSG00000160193.12	chr21:42850041:-	CCNG2^ENSG00000138764.15	chr4:77158533:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:41871:13751	.	YES_LDAS	0.0034	GT	1.7819	AG	1.5301	"[""INTERCHROMOSOMAL[chr21--chr4]""]"	chr21:42850041-chr4:77158533	False			0	Read count too low: 1 < 8	FAIL	1
WDR20--PSEN1	1	0	1.0	0.0	ONLY_REF_SPLICE	WDR20^ENSG00000140153.18	chr14:102140172:+	PSEN1^ENSG00000080815.19	chr14:73147795:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:46895:2808	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9899	"[""INTRACHROMOSOMAL[chr14:28.92Mb]""]"	chr14:102140172-chr14:73147795	False			0	Read count too low: 1 < 8	FAIL	1
WDFY2--CDKN2B-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	WDFY2^ENSG00000139668.9	chr13:51584824:+	CDKN2B-AS1^ENSG00000240498.9	chr9:22012128:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:32664:13359	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7819	"[""INTERCHROMOSOMAL[chr13--chr9]""]"	chr13:51584824-chr9:22012128	False			0	Read count too low: 1 < 8	FAIL	1
WBP1L--WBP1LP1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	WBP1L^ENSG00000166272.18	chr10:102812954:+	WBP1LP1^ENSG00000243661.1	chr7:142779140:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2371:42817:29291	.	NO_LDAS	0.0011	GT	1.7232	AG	1.3996	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:102812954-chr7:142779140	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
WBP1L--NAA60	1	0	1.0	0.0	INCL_NON_REF_SPLICE	WBP1L^ENSG00000166272.18	chr10:102814486:+	NAA60^ENSG00000122390.19	chr16:3476251:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2332:39104:9435	.	YES_LDAS	0.0034	GT	1.2729	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr16]""]"	chr10:102814486-chr16:3476251	False			0	Read count too low: 1 < 8	FAIL	1
WASHC2A--PKIB	1	0	0.13	0.0	ONLY_REF_SPLICE	WASHC2A^ENSG00000099290.17	chr10:50080931:+	PKIB^ENSG00000135549.15	chr6:122482147:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864	.	NO_LDAS	0.0004	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:50080931-chr6:122482147	False			0	Read count too low: 1 < 8	FAIL	1
WASHC2A--FOXN3	1	0	0.13	0.0	ONLY_REF_SPLICE	WASHC2A^ENSG00000099290.17	chr10:50080931:+	FOXN3^ENSG00000053254.16	chr14:89333259:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864	.	NO_LDAS	0.0004	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr14]""]"	chr10:50080931-chr14:89333259	False			0	Read count too low: 1 < 8	FAIL	1
WASHC2A--AL590814.1	1	0	0.13	0.0	ONLY_REF_SPLICE	WASHC2A^ENSG00000099290.17	chr10:50080931:+	AL590814.1^ENSG00000285961.1	chr6:92017127:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2237:14761:21864	.	NO_LDAS	0.0004	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:50080931-chr6:92017127	False			0	Read count too low: 1 < 8	FAIL	1
WASH8P--HADH	1	0	1.0	0.0	ONLY_REF_SPLICE	WASH8P^ENSG00000226210.3	chr12:26801:-	HADH^ENSG00000138796.17	chr4:108009759:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1265:51700:17520	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:26801-chr4:108009759	False			0	Read count too low: 1 < 8	FAIL	1
VWDE--FAM149B1	1	0	1.0	0.0	ONLY_REF_SPLICE	VWDE^ENSG00000146530.14	chr7:12403659:-	FAM149B1^ENSG00000138286.15	chr10:73228060:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:17075:24443	.	YES_LDAS	0.0034	GT	1.6049	AG	1.5656	"[""INTERCHROMOSOMAL[chr7--chr10]""]"	chr7:12403659-chr10:73228060	False			0	Read count too low: 1 < 8	FAIL	1
VRK2--ZNF521	1	0	1.0	0.0	INCL_NON_REF_SPLICE	VRK2^ENSG00000028116.18	chr2:58146423:+	ZNF521^ENSG00000198795.11	chr18:25225366:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1284:35827:14186	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5628	"[""INTERCHROMOSOMAL[chr2--chr18]""]"	chr2:58146423-chr18:25225366	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
VRK2--PSMG3	1	0	1.0	0.0	ONLY_REF_SPLICE	VRK2^ENSG00000028116.18	chr2:58048967:+	PSMG3^ENSG00000157778.9	chr7:1569360:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2153:47606:18081	.	YES_LDAS	0.0034	GT	1.5058	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr7]""]"	chr2:58048967-chr7:1569360	False			0	Read count too low: 1 < 8	FAIL	1
VPS45--PLEKHO1	1	0	1.0	0.0	ONLY_REF_SPLICE	VPS45^ENSG00000136631.15	chr1:150110627:+	PLEKHO1^ENSG00000023902.14	chr1:150150912:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2237:8459:6100	.	YES_LDAS	0.0034	GT	1.4566	AG	1.8892	"[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""NEIGHBORS[3854]""]"	chr1:150110627-chr1:150150912	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
VPS37A--PLEKHA8	1	0	1.0	0.0	ONLY_REF_SPLICE	VPS37A^ENSG00000155975.10	chr8:17298158:+	PLEKHA8^ENSG00000106086.20	chr7:30074071:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:42882:29347	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:17298158-chr7:30074071	False			0	Read count too low: 1 < 8	FAIL	1
VPS33A--CYBRD1	1	0	1.0	0.0	ONLY_REF_SPLICE	VPS33A^ENSG00000139719.11	chr12:122241009:-	CYBRD1^ENSG00000071967.12	chr2:171553346:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1226:5781:23209	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5546	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:122241009-chr2:171553346	False			0	Read count too low: 1 < 8	FAIL	1
VPS29--BEGAIN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	VPS29^ENSG00000111237.19	chr12:110496150:-	BEGAIN^ENSG00000183092.16	chr14:100538616:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:27260:22187	.	YES_LDAS	0.0034	GC	1.9899	AG	1.6402	"[""INTERCHROMOSOMAL[chr12--chr14]""]"	chr12:110496150-chr14:100538616	False			0	Read count too low: 1 < 8	FAIL	1
VKORC1--HMOX2	1	0	1.0	0.0	ONLY_REF_SPLICE	VKORC1^ENSG00000167397.15	chr16:31094557:-	HMOX2^ENSG00000103415.12	chr16:4505484:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:19429:8118	.	YES_LDAS	0.0034	GT	1.6895	AG	1.5058	"[""INTRACHROMOSOMAL[chr16:26.58Mb]""]"	chr16:31094557-chr16:4505484	False			0	Read count too low: 1 < 8	FAIL	1
VASP--PPM1N	1	0	1.0	0.0	ONLY_REF_SPLICE	VASP^ENSG00000125753.14	chr19:45507776:+	PPM1N^ENSG00000213889.10	chr19:45488777:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:16395:27749	.	YES_LDAS	0.0034	GT	1.8256	AG	1.2366	"[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4069]""]"	chr19:45507776-chr19:45488777	False			0	Read count too low: 1 < 8	FAIL	1
VAMP8--VAMP5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	VAMP8^ENSG00000118640.11	chr2:85581876:+	VAMP5^ENSG00000168899.5	chr2:85591725:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:6048:9071	.	YES_LDAS	0.0034	GT	1.9899	AG	1.7819	"[""ConjoinG"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[2400]""]"	chr2:85581876-chr2:85591725	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
UXT--ATP5F1C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	UXT^ENSG00000126756.12	chrX:47657839:-	ATP5F1C^ENSG00000165629.20	chr10:7806974:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1165:15586:4237	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7465	"[""INTERCHROMOSOMAL[chrX--chr10]""]"	chrX:47657839-chr10:7806974	False			0	Read count too low: 1 < 8	FAIL	1
UXT--AC025419.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	UXT^ENSG00000126756.12	chrX:47658826:-	AC025419.1^ENSG00000250748.6	chr12:65556863:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:48464:19566	.	NO_LDAS	0.0011	GT	1.8295	AG	1.5301	"[""INTERCHROMOSOMAL[chrX--chr12]""]"	chrX:47658826-chr12:65556863	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
UTP20--CCDC66	1	0	1.0	0.0	ONLY_REF_SPLICE	UTP20^ENSG00000120800.5	chr12:101312276:+	CCDC66^ENSG00000180376.17	chr3:56615922:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:31871:15881	.	YES_LDAS	0.0034	GT	1.8323	AG	1.6402	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:101312276-chr3:56615922	False			0	Read count too low: 1 < 8	FAIL	1
UTP18--LINC02073	1	0	1.0	0.0	ONLY_REF_SPLICE	UTP18^ENSG00000011260.14	chr17:51285368:+	LINC02073^ENSG00000267452.3	chr17:51440233:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:33781:6773	.	YES_LDAS	0.0034	GT	1.5628	AG	1.8892	"[""INTRACHROMOSOMAL[chr17:0.04Mb]"",""NEIGHBORS[38710]""]"	chr17:51285368-chr17:51440233	False			0	Read count too low: 1 < 8	FAIL	1
UTP11--INTS13	1	0	1.0	0.0	INCL_NON_REF_SPLICE	UTP11^ENSG00000183520.12	chr1:38023715:+	INTS13^ENSG00000064102.15	chr12:26936612:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1216:39816:14144	.	YES_LDAS	0.0034	GT	1.9656	AG	1.4295	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:38023715-chr12:26936612	False			0	Read count too low: 1 < 8	FAIL	1
UST--AL031056.1	1	0	1.0	0.0	ONLY_REF_SPLICE	UST^ENSG00000111962.8	chr6:149021481:+	AL031056.1^ENSG00000228408.6	chr6:149243729:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:45155:22579	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8256	"[""INTRACHROMOSOMAL[chr6:0.14Mb]""]"	chr6:149021481-chr6:149243729	False			0	Read count too low: 1 < 8	FAIL	1
USP5--HSD17B14	1	0	1.0	0.0	ONLY_REF_SPLICE	USP5^ENSG00000111667.14	chr12:6852290:+	HSD17B14^ENSG00000087076.9	chr19:48815141:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:3184:10472	.	YES_LDAS	0.0034	GT	1.8295	AG	1.3753	"[""INTERCHROMOSOMAL[chr12--chr19]""]"	chr12:6852290-chr19:48815141	False			0	Read count too low: 1 < 8	FAIL	1
USP49--MED20	1	0	1.0	0.0	ONLY_REF_SPLICE	USP49^ENSG00000164663.14	chr6:41798724:-	MED20^ENSG00000124641.16	chr6:41907287:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:19421:21528	.	YES_LDAS	0.0034	GT	1.5058	AG	1.8892	"[""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[9993]""]"	chr6:41798724-chr6:41907287	False			0	Read count too low: 1 < 8	FAIL	1
USP47--RAB19	1	0	1.0	0.0	INCL_NON_REF_SPLICE	USP47^ENSG00000170242.19	chr11:11842224:+	RAB19^ENSG00000146955.11	chr7:140427497:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1457:14454:19454	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8295	"[""INTERCHROMOSOMAL[chr11--chr7]""]"	chr11:11842224-chr7:140427497	False			0	Read count too low: 1 < 8	FAIL	1
USP39--AL592146.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	USP39^ENSG00000168883.20	chr2:85619289:+	AL592146.2^ENSG00000286572.1	chr1:204073903:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:21071:20295	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6402	"[""INTERCHROMOSOMAL[chr2--chr1]""]"	chr2:85619289-chr1:204073903	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
USP39--AL162291.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	USP39^ENSG00000168883.20	chr2:85616371:+	AL162291.1^ENSG00000263453.1	chr20:57895398:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:7221:1266	.	NO_LDAS	0.0034	GC	1.4295	AG	1.4295	"[""INTERCHROMOSOMAL[chr2--chr20]""]"	chr2:85616371-chr20:57895398	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
USP38--INIP	1	0	1.0	0.0	ONLY_REF_SPLICE	USP38^ENSG00000170185.10	chr4:143206226:+	INIP^ENSG00000148153.14	chr9:112694233:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2423:14866:16722	.	YES_LDAS	0.0034	GT	1.9899	AG	1.6402	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:143206226-chr9:112694233	False			0	Read count too low: 1 < 8	FAIL	1
USP3-AS1--SNX5P2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	USP3-AS1^ENSG00000259248.7	chr15:63588829:-	SNX5P2^ENSG00000258033.1	chr12:101066785:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:5425:6955	.	YES_LDAS	0.0017	GT	1.7968	AG	1.9219	"[""INTERCHROMOSOMAL[chr15--chr12]""]"	chr15:63588829-chr12:101066785	False			0	Read count too low: 1 < 8	FAIL	1
USP3-AS1--OVOL2	1	0	0.5	0.0	ONLY_REF_SPLICE	USP3-AS1^ENSG00000259248.7	chr15:63588829:-	OVOL2^ENSG00000125850.11	chr20:17957037:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:5425:6955	.	YES_LDAS	0.0017	GT	1.7968	AG	1.9219	"[""INTERCHROMOSOMAL[chr15--chr20]""]"	chr15:63588829-chr20:17957037	False			0	Read count too low: 1 < 8	FAIL	1
USP1--DNTTIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	USP1^ENSG00000162607.13	chr1:62443319:+	DNTTIP2^ENSG00000067334.14	chr1:93873214:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:8702:8791	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:31.41Mb]""]"	chr1:62443319-chr1:93873214	False			0	Read count too low: 1 < 8	FAIL	1
UQCR11--NDRG2	1	0	1.0	0.0	ONLY_REF_SPLICE	UQCR11^ENSG00000127540.12	chr19:1605360:-	NDRG2^ENSG00000165795.23	chr14:21024096:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:42995:4629	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr19--chr14]""]"	chr19:1605360-chr14:21024096	False			0	Read count too low: 1 < 8	FAIL	1
UPK3B--DTX2	1	0	0.25	0.0	ONLY_REF_SPLICE	UPK3B^ENSG00000243566.7	chr7:76511882:+	DTX2^ENSG00000091073.19	chr7:76492153:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2454:38473:22635	.	NO_LDAS	0.0008	GT	1.8295	AG	1.5546	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[4530]""]"	chr7:76511882-chr7:76492153	False			0	Read count too low: 1 < 8	FAIL	1
UPK3B--AC004980.4	1	0	0.04	0.0	INCL_NON_REF_SPLICE	UPK3B^ENSG00000243566.7	chr7:76511882:+	AC004980.4^ENSG00000250778.1	chr7:76521938:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:2505:23448	.	YES_LDAS	0.0001	GT	1.8295	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.01Mb]"",""NEIGHBORS[5089]""]"	chr7:76511882-chr7:76521938	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
UGDH-AS1--PIBF1	1	0	1.0	0.0	ONLY_REF_SPLICE	UGDH-AS1^ENSG00000249348.1	chr4:39528338:+	PIBF1^ENSG00000083535.16	chr13:72998822:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:29728:20827	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr4--chr13]""]"	chr4:39528338-chr13:72998822	False			0	Read count too low: 1 < 8	FAIL	1
UCK1--COL4A2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	UCK1^ENSG00000130717.13	chr9:131529488:-	COL4A2^ENSG00000134871.19	chr13:110449738:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:49653:21598	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5219	"[""INTERCHROMOSOMAL[chr9--chr13]""]"	chr9:131529488-chr13:110449738	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
UBIAD1--RN7SL863P	1	0	0.5	0.0	INCL_NON_REF_SPLICE	UBIAD1^ENSG00000120942.14	chr1:11285822:+	RN7SL863P^ENSG00000244632.3	chr3:62796262:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:42065:21430	.	NO_LDAS	0.0017	AT	1.5058	AC	1.9656	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:11285822-chr3:62796262	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
UBIAD1--RN7SL452P	1	0	0.5	0.0	INCL_NON_REF_SPLICE	UBIAD1^ENSG00000120942.14	chr1:11285822:+	RN7SL452P^ENSG00000243103.3	chr14:50637831:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:42065:21430	.	NO_LDAS	0.0017	AT	1.5058	AC	1.9656	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:11285822-chr14:50637831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
UBFD1--NUDT21	1	0	1.0	0.0	ONLY_REF_SPLICE	UBFD1^ENSG00000103353.16	chr16:23567069:+	NUDT21^ENSG00000167005.14	chr16:56434829:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:38360:15068	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5301	"[""INTRACHROMOSOMAL[chr16:32.85Mb]""]"	chr16:23567069-chr16:56434829	False			0	Read count too low: 1 < 8	FAIL	1
UBFD1--ESCO1	1	0	1.0	0.0	ONLY_REF_SPLICE	UBFD1^ENSG00000103353.16	chr16:23562730:+	ESCO1^ENSG00000141446.11	chr18:21568094:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2120:32252:8777	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr18]""]"	chr16:23562730-chr18:21568094	False			0	Read count too low: 1 < 8	FAIL	1
UBE2T--ABCC8	1	0	0.5	0.0	INCL_NON_REF_SPLICE	UBE2T^ENSG00000077152.11	chr1:202335685:-	ABCC8^ENSG00000006071.15	chr11:17407436:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:20715:14746	.	NO_LDAS	0.0017	GT	1.7968	AG	1.5058	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:202335685-chr11:17407436	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
UBE2N--C1orf109	1	0	1.0	0.0	ONLY_REF_SPLICE	UBE2N^ENSG00000177889.10	chr12:93411053:-	C1orf109^ENSG00000116922.14	chr1:37689883:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1240:7610:1210	.	YES_LDAS	0.0034	GT	1.5219	AG	1.8295	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:93411053-chr1:37689883	False			0	Read count too low: 1 < 8	FAIL	1
UBE2L3--PI4KAP2	1	0	1.0	0.0	ONLY_REF_SPLICE	UBE2L3^ENSG00000185651.15	chr22:21567771:+	PI4KAP2^ENSG00000183506.17	chr22:21492094:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2303:42405:25129	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9656	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr22:0.03Mb]"",""LOCAL_INVERSION:+:-:[31914]""]"	chr22:21567771-chr22:21492094	False			0	Read count too low: 1 < 8	FAIL	1
UBE2G2--TSPEAR	1	0	1.0	0.0	ONLY_REF_SPLICE	UBE2G2^ENSG00000184787.19	chr21:44787920:-	TSPEAR^ENSG00000175894.18	chr21:44568005:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1144:4026:22999	.	YES_LDAS	0.0034	GT	1.9329	AG	1.6402	"[""INTRACHROMOSOMAL[chr21:0.06Mb]"",""NEIGHBORS[57008]""]"	chr21:44787920-chr21:44568005	False			0	Read count too low: 1 < 8	FAIL	1
UBE2F--SLC25A45	1	0	1.0	0.0	INCL_NON_REF_SPLICE	UBE2F^ENSG00000184182.19	chr2:237987992:+	SLC25A45^ENSG00000162241.12	chr11:65376060:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:51732:15307	.	YES_LDAS	0.0034	GT	1.7819	AG	1.5628	"[""INTERCHROMOSOMAL[chr2--chr11]""]"	chr2:237987992-chr11:65376060	False			0	Read count too low: 1 < 8	FAIL	1
UBE2E2--TGFBR2	1	0	1.0	0.0	ONLY_REF_SPLICE	UBE2E2^ENSG00000182247.10	chr3:23217312:+	TGFBR2^ENSG00000163513.19	chr3:30671638:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2213:14810:25227	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6402	"[""INTRACHROMOSOMAL[chr3:7.01Mb]""]"	chr3:23217312-chr3:30671638	False			0	Read count too low: 1 < 8	FAIL	1
UBAP1--CCDC171	1	0	1.0	0.0	ONLY_REF_SPLICE	UBAP1^ENSG00000165006.14	chr9:34179240:+	CCDC171^ENSG00000164989.17	chr9:15885690:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:21087:16091	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr9:18.12Mb]""]"	chr9:34179240-chr9:15885690	False			0	Read count too low: 1 < 8	FAIL	1
TYMS--SLC43A3	1	0	1.0	0.0	ONLY_REF_SPLICE	TYMS^ENSG00000176890.16	chr18:662320:+	SLC43A3^ENSG00000134802.18	chr11:57410121:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51077:9267	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr18--chr11]""]"	chr18:662320-chr11:57410121	False			0	Read count too low: 1 < 8	FAIL	1
TYMS--SARNP	1	0	1.0	0.0	ONLY_REF_SPLICE	TYMS^ENSG00000176890.16	chr18:662320:+	SARNP^ENSG00000205323.9	chr12:55752840:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2160:12763:16077	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTERCHROMOSOMAL[chr18--chr12]""]"	chr18:662320-chr12:55752840	False			0	Read count too low: 1 < 8	FAIL	1
TXNRD3--ABHD15	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TXNRD3^ENSG00000197763.20	chr3:126633960:-	ABHD15^ENSG00000168792.5	chr17:29562367:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:13895:6409	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:126633960-chr17:29562367	False			0	Read count too low: 1 < 8	FAIL	1
TXNL1--ATP9B	1	0	1.0	0.0	ONLY_REF_SPLICE	TXNL1^ENSG00000091164.13	chr18:56638343:-	ATP9B^ENSG00000166377.20	chr18:79277054:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1442:6404:6100	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7968	"[""INTRACHROMOSOMAL[chr18:22.42Mb]""]"	chr18:56638343-chr18:79277054	False			0	Read count too low: 1 < 8	FAIL	1
TXNDC15--PCBD2	1	0	1.0	0.0	ONLY_REF_SPLICE	TXNDC15^ENSG00000113621.15	chr5:134874530:+	PCBD2^ENSG00000132570.15	chr5:134959040:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1453:23943:2597	.	YES_LDAS	0.0034	GT	1.6402	AG	1.7968	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""NEIGHBORS[3485]""]"	chr5:134874530-chr5:134959040	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TXLNG--F2RL2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TXLNG^ENSG00000086712.13	chrX:16793786:+	F2RL2^ENSG00000164220.7	chr5:76617277:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:38465:3985	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chrX--chr5]""]"	chrX:16793786-chr5:76617277	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TUBD1--TMTC2	1	0	1.0	0.0	ONLY_REF_SPLICE	TUBD1^ENSG00000108423.15	chr17:59886083:-	TMTC2^ENSG00000179104.9	chr12:83132210:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2409:33716:27876	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr12]""]"	chr17:59886083-chr12:83132210	False			0	Read count too low: 1 < 8	FAIL	1
TTLL5--DSCR8	1	0	1.0	0.0	ONLY_REF_SPLICE	TTLL5^ENSG00000119685.20	chr14:75669522:+	DSCR8^ENSG00000198054.12	chr21:38154433:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:8127:25844	.	NO_LDAS	0.0034	GT	1.585	AG	1.7232	"[""INTERCHROMOSOMAL[chr14--chr21]""]"	chr14:75669522-chr21:38154433	False			0	Read count too low: 1 < 8	FAIL	1
TTC23L--LMBRD2	1	0	1.0	0.0	ONLY_REF_SPLICE	TTC23L^ENSG00000205838.14	chr5:34880308:+	LMBRD2^ENSG00000164187.7	chr5:36122961:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:16816:11775	.	YES_LDAS	0.0034	GT	1.4716	AG	1.9899	"[""INTRACHROMOSOMAL[chr5:1.20Mb]""]"	chr5:34880308-chr5:36122961	False			0	Read count too low: 1 < 8	FAIL	1
TTC21B--GALNT3	1	0	1.0	0.0	ONLY_REF_SPLICE	TTC21B^ENSG00000123607.16	chr2:165912514:-	GALNT3^ENSG00000115339.14	chr2:165755063:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:22083:15517	.	NO_LDAS	0.0034	GT	1.8062	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.06Mb]"",""NEIGHBORS[62816]""]"	chr2:165912514-chr2:165755063	False			0	Read count too low: 1 < 8	FAIL	1
TTC12--LINC02495	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TTC12^ENSG00000149292.17	chr11:113341911:+	LINC02495^ENSG00000249896.2	chr4:6222671:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2129:25116:14578	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTERCHROMOSOMAL[chr11--chr4]""]"	chr11:113341911-chr4:6222671	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TSTD2--TGFBR1	1	0	1.0	0.0	ONLY_REF_SPLICE	TSTD2^ENSG00000136925.15	chr9:97617757:-	TGFBR1^ENSG00000106799.13	chr9:99128855:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1128:5684:28926	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTRACHROMOSOMAL[chr9:1.47Mb]""]"	chr9:97617757-chr9:99128855	False			0	Read count too low: 1 < 8	FAIL	1
TSLP--ZNF333	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TSLP^ENSG00000145777.15	chr5:111071852:+	ZNF333^ENSG00000160961.12	chr19:14715424:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1478:27333:4825	.	NO_LDAS	0.0034	GT	1.8295	AG	1.7056	"[""INTERCHROMOSOMAL[chr5--chr19]""]"	chr5:111071852-chr19:14715424	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TSKU--ADSS1	1	0	1.0	0.0	ONLY_REF_SPLICE	TSKU^ENSG00000182704.8	chr11:76783404:+	ADSS1^ENSG00000185100.11	chr14:104735020:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1198:31402:9463	.	NO_LDAS	0.0034	GT	1.8323	AG	1.5656	"[""INTERCHROMOSOMAL[chr11--chr14]""]"	chr11:76783404-chr14:104735020	False			0	Read count too low: 1 < 8	FAIL	1
TSKU--ACER3	1	0	1.0	0.0	ONLY_REF_SPLICE	TSKU^ENSG00000182704.8	chr11:76783404:+	ACER3^ENSG00000078124.13	chr11:76926557:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1123:43295:10809	.	YES_LDAS	0.0034	GT	1.8323	AG	1.7819	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.06Mb]"",""NEIGHBORS[62706]""]"	chr11:76783404-chr11:76926557	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TRPM4--VN1R28P	1	0	0.5	0.0	INCL_NON_REF_SPLICE	TRPM4^ENSG00000130529.16	chr19:49189062:+	VN1R28P^ENSG00000227182.1	chr7:57423686:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1303:27697:20057	.	NO_LDAS	0.0017	GT	1.8892	AG	1.7056	"[""INTERCHROMOSOMAL[chr19--chr7]""]"	chr19:49189062-chr7:57423686	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TROAP--PBXIP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TROAP^ENSG00000135451.13	chr12:49329454:+	PBXIP1^ENSG00000163346.17	chr1:154945978:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2466:21500:14956	.	NO_LDAS	0.0034	GT	1.4566	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:49329454-chr1:154945978	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TRMT12--ZHX1	1	0	1.0	0.0	ONLY_REF_SPLICE	TRMT12^ENSG00000183665.5	chr8:124451257:+	ZHX1^ENSG00000165156.15	chr8:123267386:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1378:17131:15012	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7819	"[""INTRACHROMOSOMAL[chr8:1.18Mb]""]"	chr8:124451257-chr8:123267386	False			0	Read count too low: 1 < 8	FAIL	1
TRMT11--GPR161	1	0	1.0	0.0	ONLY_REF_SPLICE	TRMT11^ENSG00000066651.20	chr6:126040845:+	GPR161^ENSG00000143147.14	chr1:168097232:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:24081:2135	.	NO_LDAS	0.0034	GT	1.6895	AG	1.8323	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:126040845-chr1:168097232	False			0	Read count too low: 1 < 8	FAIL	1
TRMT11--CENPW	1	0	1.0	0.0	ONLY_REF_SPLICE	TRMT11^ENSG00000066651.20	chr6:126174911:+	CENPW^ENSG00000203760.9	chr6:126346205:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2167:44937:15110	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr6:0.14Mb]""]"	chr6:126174911-chr6:126346205	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
TRIM74--STAG3L1	1	0	0.5	0.0	ONLY_REF_SPLICE	TRIM74^ENSG00000155428.12	chr7:72961350:-	STAG3L1^ENSG00000205583.13	chr7:75385083:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:10781:7712	.	NO_LDAS	0.0017	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:2.39Mb]""]"	chr7:72961350-chr7:75385083	False			0	Read count too low: 1 < 8	FAIL	1
TRIM67-AS1--FAM89A	1	0	1.0	0.0	ONLY_REF_SPLICE	TRIM67-AS1^ENSG00000235710.6	chr1:231186076:-	FAM89A^ENSG00000182118.8	chr1:231020126:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2493:28417:5442	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8256	"[""INTRACHROMOSOMAL[chr1:0.14Mb]""]"	chr1:231186076-chr1:231020126	False			0	Read count too low: 1 < 8	FAIL	1
TRIM6--ACER3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRIM6^ENSG00000121236.21	chr11:5603735:+	ACER3^ENSG00000078124.13	chr11:77010862:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:12350:15979	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9656	"[""INTRACHROMOSOMAL[chr11:71.25Mb]""]"	chr11:5603735-chr11:77010862	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TRIM55--AC084082.1	1	0	1.0	0.0	ONLY_REF_SPLICE	TRIM55^ENSG00000147573.17	chr8:66127436:+	AC084082.1^ENSG00000253190.4	chr8:66126546:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1444:43254:14858	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[264]""]"	chr8:66127436-chr8:66126546	False			0	Read count too low: 1 < 8	FAIL	1
TRIM52--RALGAPA2	1	0	1.0	0.0	ONLY_REF_SPLICE	TRIM52^ENSG00000183718.5	chr5:181260001:-	RALGAPA2^ENSG00000188559.15	chr20:20640878:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1123:37170:25956	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5058	"[""INTERCHROMOSOMAL[chr5--chr20]""]"	chr5:181260001-chr20:20640878	False			0	Read count too low: 1 < 8	FAIL	1
TRIM52--IMMP2L	1	0	1.0	0.0	ONLY_REF_SPLICE	TRIM52^ENSG00000183718.5	chr5:181260001:-	IMMP2L^ENSG00000184903.10	chr7:111561923:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1191:48149:29389	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr7]""]"	chr5:181260001-chr7:111561923	False			0	Read count too low: 1 < 8	FAIL	1
TRIM52--AC240565.1	1	0	0.14	0.0	ONLY_REF_SPLICE	TRIM52^ENSG00000183718.5	chr5:181260001:-	AC240565.1^ENSG00000280136.2	chr17:101174:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1432:51385:22775	.	YES_LDAS	0.0005	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr5--chr17]""]"	chr5:181260001-chr17:101174	False			0	Read count too low: 1 < 8	FAIL	1
TRIM4--ZSCAN21	1	0	1.0	0.0	ONLY_REF_SPLICE	TRIM4^ENSG00000146833.16	chr7:99919009:-	ZSCAN21^ENSG00000166529.15	chr7:100063788:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:5514:7137	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTRACHROMOSOMAL[chr7:0.13Mb]""]"	chr7:99919009-chr7:100063788	False			0	Read count too low: 1 < 8	FAIL	1
TRAM2--BLMH	1	0	1.0	0.0	ONLY_REF_SPLICE	TRAM2^ENSG00000065308.5	chr6:52576796:-	BLMH^ENSG00000108578.15	chr17:30289482:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2104:49758:16091	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr17]""]"	chr6:52576796-chr17:30289482	False			0	Read count too low: 1 < 8	FAIL	1
TRAK2--TRUB1	1	0	1.0	0.0	ONLY_REF_SPLICE	TRAK2^ENSG00000115993.13	chr2:201407403:-	TRUB1^ENSG00000165832.6	chr10:114959726:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:29614:25311	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr10]""]"	chr2:201407403-chr10:114959726	False			0	Read count too low: 1 < 8	FAIL	1
TRAK2--GPX8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRAK2^ENSG00000115993.13	chr2:201394798:-	GPX8^ENSG00000164294.14	chr5:55166238:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1332:26168:28226	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr5]""]"	chr2:201394798-chr5:55166238	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TRAFD1--FAAH	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRAFD1^ENSG00000135148.12	chr12:112141202:+	FAAH^ENSG00000117480.16	chr1:46411612:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2195:48610:5078	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:112141202-chr1:46411612	False			0	Read count too low: 1 < 8	FAIL	1
TRAF3IP1--SPN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TRAF3IP1^ENSG00000204104.12	chr2:238399239:+	SPN^ENSG00000197471.12	chr16:29668635:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2195:9624:25157	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:238399239-chr16:29668635	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TPTEP2--FIRRE	1	0	1.0	0.0	ONLY_REF_SPLICE	TPTEP2^ENSG00000244627.5	chr22:38380370:-	FIRRE^ENSG00000213468.7	chrX:131794466:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:39193:17016	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr22--chrX]""]"	chr22:38380370-chrX:131794466	False			0	Read count too low: 1 < 8	FAIL	1
TPST2--CRYBB2	1	0	1.0	0.0	ONLY_REF_SPLICE	TPST2^ENSG00000128294.16	chr22:26590053:-	CRYBB2^ENSG00000244752.3	chr22:25221404:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:4924:26460	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9656	"[""INTRACHROMOSOMAL[chr22:1.29Mb]""]"	chr22:26590053-chr22:25221404	False			0	Read count too low: 1 < 8	FAIL	1
TPGS2--CACNB1	1	0	1.0	0.0	ONLY_REF_SPLICE	TPGS2^ENSG00000134779.15	chr18:36828683:-	CACNB1^ENSG00000067191.16	chr17:39175657:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:31329:11607	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTERCHROMOSOMAL[chr18--chr17]""]"	chr18:36828683-chr17:39175657	False			0	Read count too low: 1 < 8	FAIL	1
TP73--GABRD	1	0	1.0	0.0	ONLY_REF_SPLICE	TP73^ENSG00000078900.15	chr1:3683180:+	GABRD^ENSG00000187730.9	chr1:2027577:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2465:44476:10949	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8062	"[""INTRACHROMOSOMAL[chr1:1.62Mb]""]"	chr1:3683180-chr1:2027577	False			0	Read count too low: 1 < 8	FAIL	1
TOX3--SVIL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TOX3^ENSG00000103460.17	chr16:52547035:-	SVIL^ENSG00000197321.15	chr10:29533393:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:12488:9828	.	NO_LDAS	0.0034	GC	1.8295	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr10]""]"	chr16:52547035-chr10:29533393	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TOPBP1--SRPRB	1	0	1.0	0.0	ONLY_REF_SPLICE	TOPBP1^ENSG00000163781.14	chr3:133612389:-	SRPRB^ENSG00000144867.13	chr3:133825392:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:48011:27525	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr3:0.12Mb]""]"	chr3:133612389-chr3:133825392	False			0	Read count too low: 1 < 8	FAIL	1
TOMM70--GBE1	1	0	1.0	0.0	ONLY_REF_SPLICE	TOMM70^ENSG00000154174.8	chr3:100372606:-	GBE1^ENSG00000114480.13	chr3:81537095:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2173:5134:11972	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr3:18.60Mb]""]"	chr3:100372606-chr3:81537095	False			0	Read count too low: 1 < 8	FAIL	1
TOMM7--STEAP1B	1	0	1.0	0.0	ONLY_REF_SPLICE	TOMM7^ENSG00000196683.11	chr7:22818000:-	STEAP1B^ENSG00000105889.16	chr7:22632922:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:3856:23013	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.09Mb]"",""NEIGHBORS[85015]""]"	chr7:22818000-chr7:22632922	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TOMM22--AC116533.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TOMM22^ENSG00000100216.6	chr22:38682095:+	AC116533.1^ENSG00000244398.1	chr11:16974836:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:2610:26040	.	YES_LDAS	0.0034	GT	1.6895	AG	1.7232	"[""INTERCHROMOSOMAL[chr22--chr11]""]"	chr22:38682095-chr11:16974836	False			0	Read count too low: 1 < 8	FAIL	1
TOM1--TP63	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TOM1^ENSG00000100284.22	chr22:35323177:+	TP63^ENSG00000073282.14	chr3:189868588:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:16225:24597	.	NO_LDAS	0.0034	GT	1.7465	AG	1.7819	"[""INTERCHROMOSOMAL[chr22--chr3]""]"	chr22:35323177-chr3:189868588	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TNNI3K--FPGT	1	0	1.0	0.0	ONLY_REF_SPLICE	TNNI3K^ENSG00000116783.15	chr1:74370392:+	FPGT^ENSG00000254685.7	chr1:74204391:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:12544:17520	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9899	"[""ConjoinG"",""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1301]""]"	chr1:74370392-chr1:74204391	False			0	Excluded annotation pattern: ConjoinG	FAIL	1
TNIK--EIF5A2	1	0	1.0	0.0	ONLY_REF_SPLICE	TNIK^ENSG00000154310.17	chr3:171460007:-	EIF5A2^ENSG00000163577.8	chr3:170894423:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:29606:3270	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.15Mb]""]"	chr3:171460007-chr3:170894423	False			0	Read count too low: 1 < 8	FAIL	1
TMTC4--UIMC1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMTC4^ENSG00000125247.16	chr13:100670360:-	UIMC1^ENSG00000087206.17	chr5:176958154:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:13248:2513	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr13--chr5]""]"	chr13:100670360-chr5:176958154	False			0	Read count too low: 1 < 8	FAIL	1
TMEM79--IGFN1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM79^ENSG00000163472.19	chr1:156286473:+	IGFN1^ENSG00000163395.17	chr1:201201719:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2262:10757:24148	.	YES_LDAS	0.0034	GT	1.5058	AG	1.5219	"[""INTRACHROMOSOMAL[chr1:44.90Mb]""]"	chr1:156286473-chr1:201201719	False			0	Read count too low: 1 < 8	FAIL	1
TMEM70--ASAH1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM70^ENSG00000175606.11	chr8:73976445:+	ASAH1^ENSG00000104763.20	chr8:18084008:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:29275:15811	.	YES_LDAS	0.0034	GC	1.7232	AG	1.7819	"[""INTRACHROMOSOMAL[chr8:55.89Mb]""]"	chr8:73976445-chr8:18084008	False			0	Read count too low: 1 < 8	FAIL	1
TMEM63C--NTN5	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM63C^ENSG00000165548.11	chr14:77116842:+	NTN5^ENSG00000142233.14	chr19:48664767:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1497:27187:17324	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr14--chr19]""]"	chr14:77116842-chr19:48664767	False			0	Read count too low: 1 < 8	FAIL	1
TMEM59--FHAD1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM59^ENSG00000116209.12	chr1:54053000:-	FHAD1^ENSG00000142621.19	chr1:15308613:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1426:33829:2625	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:38.63Mb]""]"	chr1:54053000-chr1:15308613	False			0	Read count too low: 1 < 8	FAIL	1
TMEM39A--RSU1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM39A^ENSG00000176142.13	chr3:119463402:-	RSU1^ENSG00000148484.18	chr10:16817404:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2123:45268:18011	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7465	"[""INTERCHROMOSOMAL[chr3--chr10]""]"	chr3:119463402-chr10:16817404	False			0	Read count too low: 1 < 8	FAIL	1
TMEM38B--FSD1L	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM38B^ENSG00000095209.12	chr9:105694772:+	FSD1L^ENSG00000106701.13	chr9:105506399:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2217:8087:14396	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7968	"[""INTRACHROMOSOMAL[chr9:0.14Mb]""]"	chr9:105694772-chr9:105506399	False			0	Read count too low: 1 < 8	FAIL	1
TMEM266--HMG20A	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM266^ENSG00000169758.13	chr15:76175674:+	HMG20A^ENSG00000140382.15	chr15:77458404:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2220:16573:15419	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7465	"[""INTRACHROMOSOMAL[chr15:1.19Mb]""]"	chr15:76175674-chr15:77458404	False			0	Read count too low: 1 < 8	FAIL	1
TMEM248--PHLPP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM248^ENSG00000106609.16	chr7:66948698:+	PHLPP2^ENSG00000040199.18	chr16:71678377:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1174:21282:21724	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5546	"[""INTERCHROMOSOMAL[chr7--chr16]""]"	chr7:66948698-chr16:71678377	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMEM248--AC002351.1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM248^ENSG00000106609.16	chr7:66953369:+	AC002351.1^ENSG00000258240.6	chr12:110956336:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1298:36903:26895	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chr7--chr12]""]"	chr7:66953369-chr12:110956336	False			0	Read count too low: 1 < 8	FAIL	1
TMEM241--BMF	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM241^ENSG00000134490.14	chr18:23377646:-	BMF^ENSG00000104081.14	chr15:40108051:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1117:3775:25816	.	NO_LDAS	0.0034	GT	1.9329	AG	1.1589	"[""INTERCHROMOSOMAL[chr18--chr15]""]"	chr18:23377646-chr15:40108051	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMEM221--DPP8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM221^ENSG00000188051.7	chr19:17436697:-	DPP8^ENSG00000074603.19	chr15:65517144:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2490:10651:23434	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5628	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:17436697-chr15:65517144	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMEM201--EMG1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM201^ENSG00000188807.13	chr1:9596010:+	EMG1^ENSG00000126749.16	chr12:6978321:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1158:37939:29081	.	YES_LDAS	0.0034	GT	1.9329	AG	1.6729	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:9596010-chr12:6978321	False			0	Read count too low: 1 < 8	FAIL	1
TMEM200B--DMBX1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM200B^ENSG00000253304.2	chr1:29123856:-	DMBX1^ENSG00000197587.11	chr1:46506999:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1275:25747:26124	.	YES_LDAS	0.0034	GT	1.5628	AG	1.8323	"[""INTRACHROMOSOMAL[chr1:17.37Mb]""]"	chr1:29123856-chr1:46506999	False			0	Read count too low: 1 < 8	FAIL	1
TMEM191A--ATP5F1E	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM191A^ENSG00000226287.8	chr22:20703122:+	ATP5F1E^ENSG00000124172.10	chr20:59030429:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1488:15408:7712	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8062	"[""INTERCHROMOSOMAL[chr22--chr20]""]"	chr22:20703122-chr20:59030429	False			0	Read count too low: 1 < 8	FAIL	1
TMEM184C--PRIM2	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM184C^ENSG00000164168.8	chr4:147631505:+	PRIM2^ENSG00000146143.19	chr6:57507387:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:5935:19861	.	NO_LDAS	0.0034	GT	0.9056	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:147631505-chr6:57507387	False			0	Read count too low: 1 < 8	FAIL	1
TMEM177--ESR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM177^ENSG00000144120.13	chr2:119685754:+	ESR2^ENSG00000140009.19	chr14:64230011:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:25553:13849	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7819	"[""INTERCHROMOSOMAL[chr2--chr14]""]"	chr2:119685754-chr14:64230011	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMEM167A--TRAPPC3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM167A^ENSG00000174695.10	chr5:83057135:-	TRAPPC3^ENSG00000054116.12	chr1:36156016:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:10910:5414	.	NO_LDAS	0.0034	GT	1.9899	AG	1.1589	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:83057135-chr1:36156016	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMEM165--MMAB	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM165^ENSG00000134851.13	chr4:55396396:+	MMAB^ENSG00000139428.12	chr12:109561852:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1445:25197:8272	.	YES_LDAS	0.0034	GT	1.5628	AG	1.9899	"[""INTERCHROMOSOMAL[chr4--chr12]""]"	chr4:55396396-chr12:109561852	False			0	Read count too low: 1 < 8	FAIL	1
TMEM164--AMMECR1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM164^ENSG00000157600.12	chrX:110144876:+	AMMECR1^ENSG00000101935.11	chrX:110216632:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1474:10425:1294	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""LOCAL_INVERSION:+:-:[11452]""]"	chrX:110144876-chrX:110216632	False			0	Read count too low: 1 < 8	FAIL	1
TMEM161B--PGBD2	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM161B^ENSG00000164180.14	chr5:88196376:-	PGBD2^ENSG00000185220.12	chr1:248917279:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:15756:2906	.	YES_LDAS	0.0034	GT	1.2729	AG	1.8295	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:88196376-chr1:248917279	False			0	Read count too low: 1 < 8	FAIL	1
TMEM14C--JAZF1-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM14C^ENSG00000111843.14	chr6:10728727:+	JAZF1-AS1^ENSG00000234336.7	chr7:28242607:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1207:28409:22018	.	YES_LDAS	0.0034	GT	1.9656	AG	1.4716	"[""INTERCHROMOSOMAL[chr6--chr7]""]"	chr6:10728727-chr7:28242607	False			0	Read count too low: 1 < 8	FAIL	1
TMEM147-AS1--SBSN	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM147-AS1^ENSG00000236144.8	chr19:35541751:-	SBSN^ENSG00000189001.11	chr19:35524924:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:47784:11803	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""NEIGHBORS[12387]""]"	chr19:35541751-chr19:35524924	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TMEM135--ALG9	1	0	1.0	0.0	ONLY_REF_SPLICE	TMEM135^ENSG00000166575.17	chr11:87071615:+	ALG9^ENSG00000086848.15	chr11:111786520:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1357:1930:9898	.	YES_LDAS	0.0034	GT	1.4716	AG	1.9329	"[""INTRACHROMOSOMAL[chr11:24.45Mb]""]"	chr11:87071615-chr11:111786520	False			0	Read count too low: 1 < 8	FAIL	1
TMEM106C--LINC00607	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMEM106C^ENSG00000134291.12	chr12:47964423:+	LINC00607^ENSG00000235770.6	chr2:215701084:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:40819:20897	.	NO_LDAS	0.0034	GT	1.9086	AG	1.2867	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:47964423-chr2:215701084	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMED9--MEF2C-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TMED9^ENSG00000184840.12	chr5:177592654:+	MEF2C-AS1^ENSG00000248309.7	chr5:89075122:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1422:43748:8090	.	NO_LDAS	0.0034	GT	1.6895	AG	1.7819	"[""INTRACHROMOSOMAL[chr5:88.13Mb]""]"	chr5:177592654-chr5:89075122	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TMED3--MINAR1	1	0	1.0	0.0	ONLY_REF_SPLICE	TMED3^ENSG00000166557.14	chr15:79314005:+	MINAR1^ENSG00000169330.9	chr15:79463067:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2331:40253:4055	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8256	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS[4904]""]"	chr15:79314005-chr15:79463067	False			0	Read count too low: 1 < 8	FAIL	1
TMC5--GSDMB	1	0	1.0	0.0	ONLY_REF_SPLICE	TMC5^ENSG00000103534.17	chr16:19460334:+	GSDMB^ENSG00000073605.18	chr17:39912497:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2109:50300:25101	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr17]""]"	chr16:19460334-chr17:39912497	False			0	Read count too low: 1 < 8	FAIL	1
TIMM23B--AGAP12P	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TIMM23B^ENSG00000204152.14	chr10:49958480:+	AGAP12P^ENSG00000265018.6	chr10:48033165:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1178:4066:14578	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTRACHROMOSOMAL[chr10:1.91Mb]""]"	chr10:49958480-chr10:48033165	False			0	Read count too low: 1 < 8	FAIL	1
TICAM2--OR10K1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	TICAM2^ENSG00000243414.6	chr5:115580662:-	OR10K1^ENSG00000173285.4	chr1:158467313:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1292:32292:11061	.	NO_LDAS	0.0017	GT	1.7968	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:115580662-chr1:158467313	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TIA1--STAMBP	1	0	1.0	0.0	ONLY_REF_SPLICE	TIA1^ENSG00000116001.17	chr2:70214349:-	STAMBP^ENSG00000124356.16	chr2:73844813:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2374:40868:18655	.	NO_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:3.58Mb]""]"	chr2:70214349-chr2:73844813	False			0	Read count too low: 1 < 8	FAIL	1
THUMPD3-AS1--TM7SF3	1	0	1.0	0.0	ONLY_REF_SPLICE	THUMPD3-AS1^ENSG00000206573.9	chr3:9390290:-	TM7SF3^ENSG00000064115.11	chr12:26999676:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1164:6914:20071	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5219	"[""INTERCHROMOSOMAL[chr3--chr12]""]"	chr3:9390290-chr12:26999676	False			0	Read count too low: 1 < 8	FAIL	1
THUMPD3--PARPBP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	THUMPD3^ENSG00000134077.16	chr3:9365072:+	PARPBP^ENSG00000185480.12	chr12:102151831:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1270:12375:23364	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8295	"[""INTERCHROMOSOMAL[chr3--chr12]""]"	chr3:9365072-chr12:102151831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
THBS1--ORC5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	THBS1^ENSG00000137801.11	chr15:39593596:+	ORC5^ENSG00000164815.11	chr7:104136880:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:11638:6983	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:39593596-chr7:104136880	False			0	Read count too low: 1 < 8	FAIL	1
TGFBR1--TEX13B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TGFBR1^ENSG00000106799.13	chr9:99147779:+	TEX13B^ENSG00000170925.3	chrX:107982153:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1338:39476:14900	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTERCHROMOSOMAL[chr9--chrX]""]"	chr9:99147779-chrX:107982153	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TGFB2--LYSMD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TGFB2^ENSG00000092969.12	chr1:218345713:+	LYSMD1^ENSG00000163155.12	chr1:151165206:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:19154:29529	.	NO_LDAS	0.0034	GT	1.7968	AG	1.7465	"[""INTRACHROMOSOMAL[chr1:67.18Mb]""]"	chr1:218345713-chr1:151165206	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TESK2--ZSWIM5	1	0	1.0	0.0	ONLY_REF_SPLICE	TESK2^ENSG00000070759.17	chr1:45355303:-	ZSWIM5^ENSG00000162415.7	chr1:45060247:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1429:33587:8146	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[37674]""]"	chr1:45355303-chr1:45060247	False			0	Read count too low: 1 < 8	FAIL	1
TERT--KATNBL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TERT^ENSG00000164362.21	chr5:1258598:-	KATNBL1^ENSG00000134152.11	chr15:34209992:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1225:13742:11495	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:1258598-chr15:34209992	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TERF2IP--PAQR6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TERF2IP^ENSG00000166848.7	chr16:75733610:+	PAQR6^ENSG00000160781.17	chr1:156246756:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1431:37154:27918	.	NO_LDAS	0.0034	GT	1.5329	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr1]""]"	chr16:75733610-chr1:156246756	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TEPSIN--C13orf46	1	0	1.0	0.0	ONLY_REF_SPLICE	TEPSIN^ENSG00000167302.11	chr17:81238986:-	C13orf46^ENSG00000283199.3	chr13:113970222:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1127:49726:22537	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr13]""]"	chr17:81238986-chr13:113970222	False			0	Read count too low: 1 < 8	FAIL	1
TDRKH--VSX2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TDRKH^ENSG00000182134.16	chr1:151775392:-	VSX2^ENSG00000119614.3	chr14:74262619:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2435:40059:25802	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:151775392-chr14:74262619	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TDRD5--AXDND1	1	0	1.0	0.0	ONLY_REF_SPLICE	TDRD5^ENSG00000162782.16	chr1:179669404:+	AXDND1^ENSG00000162779.22	chr1:179525334:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:18450:23602	.	YES_LDAS	0.0034	GT	1.8256	AG	1.6895	"[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[36878]""]"	chr1:179669404-chr1:179525334	False			0	Read count too low: 1 < 8	FAIL	1
TDRD3--MYOZ3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TDRD3^ENSG00000083544.16	chr13:60535237:+	MYOZ3^ENSG00000164591.14	chr5:150672110:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1261:15513:29641	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6729	"[""INTERCHROMOSOMAL[chr13--chr5]""]"	chr13:60535237-chr5:150672110	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TBRG1--SREK1IP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TBRG1^ENSG00000154144.13	chr11:124632303:+	SREK1IP1^ENSG00000153006.16	chr5:64768640:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:41312:3873	.	NO_LDAS	0.0034	GT	1.6895	AG	1.7465	"[""INTERCHROMOSOMAL[chr11--chr5]""]"	chr11:124632303-chr5:64768640	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TBP--GNAI3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TBP^ENSG00000112592.14	chr6:170571504:+	GNAI3^ENSG00000065135.12	chr1:109592498:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:3872:25227	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:170571504-chr1:109592498	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TBCEL--TECTA	1	0	1.0	0.0	ONLY_REF_SPLICE	TBCEL^ENSG00000154114.12	chr11:121060085:+	TECTA^ENSG00000109927.11	chr11:121102665:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:30973:20519	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[10468]""]"	chr11:121060085-chr11:121102665	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TBCE--GGPS1	1	0	1.0	0.0	ONLY_REF_SPLICE	TBCE^ENSG00000284770.2	chr1:235401587:+	GGPS1^ENSG00000152904.11	chr1:235335242:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:19308:17857	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7465	"[""DEEPEST2019"",""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr1:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[22828]""]"	chr1:235401587-chr1:235335242	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D4--AC011933.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	TBC1D4^ENSG00000136111.14	chr13:75362071:-	AC011933.1^ENSG00000228007.1	chr17:75339060:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2102:32964:29291	.	YES_LDAS	0.0011	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr13--chr17]""]"	chr13:75362071-chr17:75339060	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D31--AC063926.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TBC1D31^ENSG00000156787.17	chr8:123077257:+	AC063926.3^ENSG00000279905.1	chr12:130430652:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2305:47396:5330	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr12]""]"	chr8:123077257-chr12:130430652	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D30--INPP4B	1	0	1.0	0.0	ONLY_REF_SPLICE	TBC1D30^ENSG00000111490.15	chr12:64843485:+	INPP4B^ENSG00000109452.12	chr4:142405324:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:28878:7894	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:64843485-chr4:142405324	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D2--GSTT2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	TBC1D2^ENSG00000095383.20	chr9:98199416:-	GSTT2^ENSG00000099984.11	chr22:23982898:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2491:8014:1434	.	YES_LDAS	0.0017	GT	1.8062	AG	1.7465	"[""INTERCHROMOSOMAL[chr9--chr22]""]"	chr9:98199416-chr22:23982898	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D13--SMIM19	1	0	1.0	0.0	ONLY_REF_SPLICE	TBC1D13^ENSG00000107021.16	chr9:128806311:+	SMIM19^ENSG00000176209.12	chr8:42546469:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:12755:2695	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr9--chr8]""]"	chr9:128806311-chr8:42546469	False			0	Read count too low: 1 < 8	FAIL	1
TBC1D13--ENDOG	1	0	1.0	0.0	ONLY_REF_SPLICE	TBC1D13^ENSG00000107021.16	chr9:128806311:+	ENDOG^ENSG00000167136.7	chr9:128820739:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:32454:11481	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7232	"[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""NEIGHBORS[8070]""]"	chr9:128806311-chr9:128820739	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
TBC1D10C--FBXO5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TBC1D10C^ENSG00000175463.12	chr11:67405921:+	FBXO5^ENSG00000112029.10	chr6:152982906:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:24291:25704	.	YES_LDAS	0.0034	GT	1.8323	AG	1.3383	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:67405921-chr6:152982906	False			0	Read count too low: 1 < 8	FAIL	1
TARDBPP4--AC012485.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	TARDBPP4^ENSG00000253555.1	chr8:63137813:-	AC012485.1^ENSG00000225057.2	chr2:238231867:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1194:31726:6969	.	YES_LDAS	0.0034	GT	1.9899	AG	1.3383	"[""INTERCHROMOSOMAL[chr8--chr2]""]"	chr8:63137813-chr2:238231867	False			0	Read count too low: 1 < 8	FAIL	1
TAF9P1--TAF9	1	0	0.5	0.0	INCL_NON_REF_SPLICE	TAF9P1^ENSG00000226353.1	chrY:17628541:+	TAF9^ENSG00000273841.5	chr5:69365270:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:23434:19398	.	NO_LDAS	0.0017	GC	1.8295	AG	1.6895	"[""INTERCHROMOSOMAL[chrY--chr5]""]"	chrY:17628541-chr5:69365270	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
TAF12--MED18	1	0	1.0	0.0	ONLY_REF_SPLICE	TAF12^ENSG00000120656.12	chr1:28613247:-	MED18^ENSG00000130772.14	chr1:28334417:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:4422:1659	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTRACHROMOSOMAL[chr1:0.25Mb]""]"	chr1:28613247-chr1:28334417	False			0	Read count too low: 1 < 8	FAIL	1
SYT14--CARHSP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SYT14^ENSG00000143469.20	chr1:210168253:+	CARHSP1^ENSG00000153048.11	chr16:8855256:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:30642:18768	.	NO_LDAS	0.0034	GT	1.3753	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:210168253-chr16:8855256	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SYS1--DBNDD2	1	0	1.0	0.0	ONLY_REF_SPLICE	SYS1^ENSG00000204070.10	chr20:45365686:+	DBNDD2^ENSG00000244274.8	chr20:45408460:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2411:15408:16231	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9329	"[""INTRACHROMOSOMAL[chr20:0.03Mb]"",""NEIGHBORS[29259]""]"	chr20:45365686-chr20:45408460	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SYNC--AC141424.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SYNC^ENSG00000162520.15	chr1:32680109:-	AC141424.1^ENSG00000241525.4	chr17:414103:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1451:42000:11509	.	YES_LDAS	0.0017	GT	1.6895	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:32680109-chr17:414103	False			0	Read count too low: 1 < 8	FAIL	1
SURF1--NTF3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SURF1^ENSG00000148290.10	chr9:133352694:-	NTF3^ENSG00000185652.12	chr12:5513151:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1238:3467:28450	.	NO_LDAS	0.0034	GT	1.5656	AG	1.5058	"[""INTERCHROMOSOMAL[chr9--chr12]""]"	chr9:133352694-chr12:5513151	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUPT3H--H1-3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUPT3H^ENSG00000196284.17	chr6:44961753:-	H1-3^ENSG00000124575.7	chr6:26234387:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:21371:14480	.	NO_LDAS	0.0034	GT	1.8323	AG	1.6895	"[""INTRACHROMOSOMAL[chr6:18.57Mb]""]"	chr6:44961753-chr6:26234387	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUPT3H--BRIX1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUPT3H^ENSG00000196284.17	chr6:45020546:-	BRIX1^ENSG00000113460.13	chr5:34922265:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:35674:2878	.	NO_LDAS	0.0034	GT	1.7968	AG	1.7232	"[""INTERCHROMOSOMAL[chr6--chr5]""]"	chr6:45020546-chr5:34922265	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUPT20H--AL354733.2	1	0	1.0	0.0	ONLY_REF_SPLICE	SUPT20H^ENSG00000102710.20	chr13:37059559:-	AL354733.2^ENSG00000231616.9	chr9:83863661:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:39703:7838	.	YES_LDAS	0.0034	GT	1.5656	AG	1.8892	"[""INTERCHROMOSOMAL[chr13--chr9]""]"	chr13:37059559-chr9:83863661	False			0	Read count too low: 1 < 8	FAIL	1
SUN3--MRPL30	1	0	1.0	0.0	ONLY_REF_SPLICE	SUN3^ENSG00000164744.13	chr7:48018499:-	MRPL30^ENSG00000185414.20	chr2:99186177:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:39233:8539	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:48018499-chr2:99186177	False			0	Read count too low: 1 < 8	FAIL	1
SUMO1--AC005252.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUMO1^ENSG00000116030.17	chr2:202207259:-	AC005252.3^ENSG00000280415.1	chr12:125860793:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:26087:16484	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:202207259-chr12:125860793	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUMF1--FEN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUMF1^ENSG00000144455.14	chr3:4452999:-	FEN1^ENSG00000168496.4	chr11:61795913:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:39233:25970	.	NO_LDAS	0.0034	AT	1.9656	AC	1.8062	"[""INTERCHROMOSOMAL[chr3--chr11]""]"	chr3:4452999-chr11:61795913	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUMF1--ARFIP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SUMF1^ENSG00000144455.14	chr3:4466976:-	ARFIP1^ENSG00000164144.16	chr4:152910064:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2372:23474:25409	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr4]""]"	chr3:4466976-chr4:152910064	False			0	Read count too low: 1 < 8	FAIL	1
SUGT1P4--STARD8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUGT1P4^ENSG00000254483.1	chr9:97250809:+	STARD8^ENSG00000130052.13	chrX:68720288:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:13726:10150	.	NO_LDAS	0.0034	GT	1.9086	AG	1.5058	"[""INTERCHROMOSOMAL[chr9--chrX]""]"	chr9:97250809-chrX:68720288	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SUGT1P4--MYL6B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SUGT1P4^ENSG00000254483.1	chr9:97246186:+	MYL6B^ENSG00000196465.10	chr12:56157468:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1155:35957:20715	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7056	"[""INTERCHROMOSOMAL[chr9--chr12]""]"	chr9:97246186-chr12:56157468	False			0	Read count too low: 1 < 8	FAIL	1
SUCLG2--TAFA4	1	0	1.0	0.0	ONLY_REF_SPLICE	SUCLG2^ENSG00000172340.15	chr3:67609455:-	TAFA4^ENSG00000163377.16	chr3:68753018:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2498:52048:15433	.	YES_LDAS	0.0034	GT	1.9219	AG	1.7056	"[""INTRACHROMOSOMAL[chr3:1.08Mb]""]"	chr3:67609455-chr3:68753018	False			0	Read count too low: 1 < 8	FAIL	1
SUB1--NBPF15	1	0	0.33	0.0	INCL_NON_REF_SPLICE	SUB1^ENSG00000113387.12	chr5:32588572:+	NBPF15^ENSG00000266338.6	chr1:144440513:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:14826:21444	.	YES_LDAS	0.0011	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:32588572-chr1:144440513	False			0	Read count too low: 1 < 8	FAIL	1
STXBP5L--IGSF11	1	0	1.0	0.0	ONLY_REF_SPLICE	STXBP5L^ENSG00000145087.13	chr3:121240507:+	IGSF11^ENSG00000144847.13	chr3:118930275:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:34501:5778	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:1.76Mb]""]"	chr3:121240507-chr3:118930275	False			0	Read count too low: 1 < 8	FAIL	1
STX5--WDR74	1	0	1.0	0.0	ONLY_REF_SPLICE	STX5^ENSG00000162236.13	chr11:62824166:-	WDR74^ENSG00000133316.16	chr11:62839659:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1390:33514:19314	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""YOSHIHARA_TCGA"",""GTEx_recurrent_StarF2019"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[291]""]"	chr11:62824166-chr11:62839659	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
STX5--MED26	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STX5^ENSG00000162236.13	chr11:62831112:-	MED26^ENSG00000105085.11	chr19:16628012:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1364:34881:1785	.	NO_LDAS	0.0034	GT	1.2366	AG	1.4256	"[""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:62831112-chr19:16628012	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
STX12--PPP1R8	1	0	1.0	0.0	ONLY_REF_SPLICE	STX12^ENSG00000117758.14	chr1:27819732:+	PPP1R8^ENSG00000117751.18	chr1:27832756:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2307:2011:28618	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[6339]""]"	chr1:27819732-chr1:27832756	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
STON1--PPP1R21	1	0	1.0	0.0	ONLY_REF_SPLICE	STON1^ENSG00000243244.7	chr2:48530829:+	PPP1R21^ENSG00000162869.16	chr2:48451008:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:50025:23083	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9899	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13992]""]"	chr2:48530829-chr2:48451008	False			0	Read count too low: 1 < 8	FAIL	1
STK4--NYNRIN	1	0	0.5	0.0	INCL_NON_REF_SPLICE	STK4^ENSG00000101109.12	chr20:44972164:+	NYNRIN^ENSG00000205978.6	chr14:24417441:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:7521:27091	.	NO_LDAS	0.0017	GT	1.4566	AG	1.7465	"[""INTERCHROMOSOMAL[chr20--chr14]""]"	chr20:44972164-chr14:24417441	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
STK11IP--TANC1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STK11IP^ENSG00000144589.22	chr2:219606852:+	TANC1^ENSG00000115183.15	chr2:159196758:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:49775:27049	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5628	"[""INTRACHROMOSOMAL[chr2:60.37Mb]""]"	chr2:219606852-chr2:159196758	False			0	Read count too low: 1 < 8	FAIL	1
STEAP1--RAPGEF5	1	0	0.5	0.0	ONLY_REF_SPLICE	STEAP1^ENSG00000164647.9	chr7:90162078:+	RAPGEF5^ENSG00000136237.19	chr7:22318037:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:49936:15363	.	YES_LDAS	0.0017	GT	1.7465	AG	1.8295	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:67.80Mb]""]"	chr7:90162078-chr7:22318037	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
STARD9--AC011498.7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STARD9^ENSG00000159433.12	chr15:42688231:+	AC011498.7^ENSG00000280239.1	chr19:4450252:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:14510:28324	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7968	"[""INTERCHROMOSOMAL[chr15--chr19]""]"	chr15:42688231-chr19:4450252	False			0	Read count too low: 1 < 8	FAIL	1
STAG3L5P--ADAMTS7P3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STAG3L5P^ENSG00000242294.6	chr7:100345898:+	ADAMTS7P3^ENSG00000261143.1	chr15:77990099:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2258:45689:18712	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:100345898-chr15:77990099	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
STAG3L3--HMGCL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	STAG3L3^ENSG00000174353.17	chr7:72999761:-	HMGCL^ENSG00000117305.15	chr1:23803967:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:20812:14186	.	NO_LDAS	0.0034	GT	1.9656	AG	1.6895	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:72999761-chr1:23803967	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
STAG3L1--SNX16	1	0	0.33	0.0	INCL_NON_REF_SPLICE	STAG3L1^ENSG00000205583.13	chr7:75366438:+	SNX16^ENSG00000104497.14	chr8:81839891:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1122:35277:8609	.	YES_LDAS	0.0011	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:75366438-chr8:81839891	False			0	Read count too low: 1 < 8	FAIL	1
SSX2IP--AC008676.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SSX2IP^ENSG00000117155.17	chr1:84655832:-	AC008676.1^ENSG00000248544.2	chr5:157376207:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:9058:21262	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8062	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:84655832-chr5:157376207	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SSBP1--MGAM	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SSBP1^ENSG00000106028.11	chr7:141750384:+	MGAM^ENSG00000257335.8	chr7:141988933:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:4632:19258	.	YES_LDAS	0.0017	GT	1.8295	AG	1.7819	"[""INTRACHROMOSOMAL[chr7:0.12Mb]""]"	chr7:141750384-chr7:141988933	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SSB--METTL5	1	0	1.0	0.0	ONLY_REF_SPLICE	SSB^ENSG00000138385.16	chr2:169801026:+	METTL5^ENSG00000138382.15	chr2:169821273:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2328:50163:17661	.	YES_LDAS	0.0034	GT	1.9086	AG	1.2729	"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1983]""]"	chr2:169801026-chr2:169821273	False			0	Read count too low: 1 < 8	FAIL	1
SRP54--DGKH	1	0	1.0	0.0	ONLY_REF_SPLICE	SRP54^ENSG00000100883.13	chr14:35019074:+	DGKH^ENSG00000102780.17	chr13:42229099:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2149:6218:18501	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9219	"[""INTERCHROMOSOMAL[chr14--chr13]""]"	chr14:35019074-chr13:42229099	False			0	Read count too low: 1 < 8	FAIL	1
SRIP1--SRI	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SRIP1^ENSG00000248660.1	chr4:58103246:+	SRI^ENSG00000075142.14	chr7:88209439:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:39516:4293	.	NO_LDAS	0.0034	GT	1.5219	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr7]""]"	chr4:58103246-chr7:88209439	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SRFBP1--AC010255.2	1	0	1.0	0.0	ONLY_REF_SPLICE	SRFBP1^ENSG00000151304.6	chr5:122022407:+	AC010255.2^ENSG00000250803.6	chr5:122179550:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:14098:7936	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:0.05Mb]"",""NEIGHBORS[54052]""]"	chr5:122022407-chr5:122179550	False			0	Read count too low: 1 < 8	FAIL	1
SRBD1--NFAM1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SRBD1^ENSG00000068784.13	chr2:45573207:-	NFAM1^ENSG00000235568.7	chr22:42384462:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:38716:23027	.	NO_LDAS	0.0034	GT	1.8256	AG	1.8323	"[""INTERCHROMOSOMAL[chr2--chr22]""]"	chr2:45573207-chr22:42384462	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SPTY2D1--SERGEF	1	0	1.0	0.0	ONLY_REF_SPLICE	SPTY2D1^ENSG00000179119.15	chr11:18634198:-	SERGEF^ENSG00000129158.11	chr11:18008076:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1285:9341:25451	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.59Mb]""]"	chr11:18634198-chr11:18008076	False			0	Read count too low: 1 < 8	FAIL	1
SPTLC1--ZFAND6	1	0	1.0	0.0	ONLY_REF_SPLICE	SPTLC1^ENSG00000090054.15	chr9:92055405:-	ZFAND6^ENSG00000086666.19	chr15:80131180:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:15465:23840	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr15]""]"	chr9:92055405-chr15:80131180	False			0	Read count too low: 1 < 8	FAIL	1
SPSB2--P2RX6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SPSB2^ENSG00000111671.10	chr12:6872226:-	P2RX6^ENSG00000099957.16	chr22:21028482:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:42235:12504	.	NO_LDAS	0.0034	GC	1.6049	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr22]""]"	chr12:6872226-chr22:21028482	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SPOUT1--KRT15	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SPOUT1^ENSG00000198917.13	chr9:128827064:-	KRT15^ENSG00000171346.16	chr17:41515485:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1187:22293:25157	.	NO_LDAS	0.0017	GT	1.7819	AG	1.8062	"[""INTERCHROMOSOMAL[chr9--chr17]""]"	chr9:128827064-chr17:41515485	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SPON1-AS1--RRAS2	1	0	1.0	0.0	ONLY_REF_SPLICE	SPON1-AS1^ENSG00000254418.1	chr11:14273654:-	RRAS2^ENSG00000133818.14	chr11:14295855:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1322:30529:4027	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4231]""]"	chr11:14273654-chr11:14295855	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
SPINDOC--SAC3D1	1	0	1.0	0.0	ONLY_REF_SPLICE	SPINDOC^ENSG00000168005.9	chr11:63819002:+	SAC3D1^ENSG00000168061.17	chr11:65044225:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:41110:27399	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:1.21Mb]""]"	chr11:63819002-chr11:65044225	False			0	Read count too low: 1 < 8	FAIL	1
SPIN3--PHLPP2	1	0	1.0	0.0	ONLY_REF_SPLICE	SPIN3^ENSG00000204271.13	chrX:56994723:-	PHLPP2^ENSG00000040199.18	chr16:71644855:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:29315:2373	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr16]""]"	chrX:56994723-chr16:71644855	False			0	Read count too low: 1 < 8	FAIL	1
SPIN3--EXOC4	1	0	1.0	0.0	ONLY_REF_SPLICE	SPIN3^ENSG00000204271.13	chrX:56984266:-	EXOC4^ENSG00000131558.15	chr7:133288922:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:16298:16932	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7968	"[""INTERCHROMOSOMAL[chrX--chr7]""]"	chrX:56984266-chr7:133288922	False			0	Read count too low: 1 < 8	FAIL	1
SPESP1--ESAM	1	0	1.0	0.0	ONLY_REF_SPLICE	SPESP1^ENSG00000258484.4	chr15:68818317:+	ESAM^ENSG00000149564.12	chr11:124758527:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:30537:19426	.	NO_LDAS	0.0034	GT	1.6402	AG	1.231	"[""INTERCHROMOSOMAL[chr15--chr11]""]"	chr15:68818317-chr11:124758527	False			0	Read count too low: 1 < 8	FAIL	1
SPESP1--AC027088.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SPESP1^ENSG00000258484.4	chr15:68818317:+	AC027088.1^ENSG00000137808.12	chr15:68974729:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:4543:24737	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""NEIGHBORS_OVERLAP:+:+:[16307]""]"	chr15:68818317-chr15:68974729	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SPCS2P4--PANX1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SPCS2P4^ENSG00000228589.3	chr1:28096225:-	PANX1^ENSG00000110218.9	chr11:94178369:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:24259:14466	.	YES_LDAS	0.0034	GT	1.9219	AG	1.4295	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:28096225-chr11:94178369	False			0	Read count too low: 1 < 8	FAIL	1
SPATA17--GULP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SPATA17^ENSG00000162814.11	chr1:217737967:+	GULP1^ENSG00000144366.16	chr2:188477659:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:31103:1659	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:217737967-chr2:188477659	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
SPAG5--EIF3J	1	0	1.0	0.0	ONLY_REF_SPLICE	SPAG5^ENSG00000076382.17	chr17:28579365:-	EIF3J^ENSG00000104131.13	chr15:44554553:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:23312:13723	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr15]""]"	chr17:28579365-chr15:44554553	False			0	Read count too low: 1 < 8	FAIL	1
SP100--DYNLRB1	1	0	1.0	0.0	ONLY_REF_SPLICE	SP100^ENSG00000067066.17	chr2:230449150:+	DYNLRB1^ENSG00000125971.17	chr20:34540581:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1442:44759:18025	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7819	"[""INTERCHROMOSOMAL[chr2--chr20]""]"	chr2:230449150-chr20:34540581	False			0	Read count too low: 1 < 8	FAIL	1
SP100--AL078622.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SP100^ENSG00000067066.17	chr2:230470277:+	AL078622.1^ENSG00000286381.1	chr22:49051520:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1428:40204:6745	.	NO_LDAS	0.0034	GT	1.7056	AG	1.8295	"[""INTERCHROMOSOMAL[chr2--chr22]""]"	chr2:230470277-chr22:49051520	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SORBS1--PEX3	1	0	1.0	0.0	ONLY_REF_SPLICE	SORBS1^ENSG00000095637.22	chr10:95367650:-	PEX3^ENSG00000034693.15	chr6:143470961:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1269:28563:16792	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:95367650-chr6:143470961	False			0	Read count too low: 1 < 8	FAIL	1
SOCS2--LNPK	1	0	1.0	0.0	ONLY_REF_SPLICE	SOCS2^ENSG00000120833.14	chr12:93575173:+	LNPK^ENSG00000144320.14	chr2:175964589:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1494:48197:10192	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9329	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:93575173-chr2:175964589	False			0	Read count too low: 1 < 8	FAIL	1
SNX29P1--CRYM-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SNX29P1^ENSG00000158482.10	chr16:21385932:+	CRYM-AS1^ENSG00000189149.12	chr16:21315884:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:1372:22999	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[37611]""]"	chr16:21385932-chr16:21315884	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SNX29P1--AC025279.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SNX29P1^ENSG00000158482.10	chr16:21385932:+	AC025279.2^ENSG00000260413.1	chr16:29326347:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1368:36175:24457	.	YES_LDAS	0.0017	GT	1.8256	AG	1.9086	"[""INTRACHROMOSOMAL[chr16:7.93Mb]""]"	chr16:21385932-chr16:29326347	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SNX12--NUDT19P3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SNX12^ENSG00000147164.12	chrX:71061028:-	NUDT19P3^ENSG00000216723.1	chr6:114020163:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1242:39241:13233	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9219	"[""INTERCHROMOSOMAL[chrX--chr6]""]"	chrX:71061028-chr6:114020163	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SNRPF--EFHC1	1	0	1.0	0.0	ONLY_REF_SPLICE	SNRPF^ENSG00000139343.10	chr12:95889181:+	EFHC1^ENSG00000096093.16	chr6:52452688:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:51797:9225	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7819	"[""INTERCHROMOSOMAL[chr12--chr6]""]"	chr12:95889181-chr6:52452688	False			0	Read count too low: 1 < 8	FAIL	1
SNRPE--CHMP5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SNRPE^ENSG00000182004.13	chr1:203869920:+	CHMP5^ENSG00000086065.14	chr9:33278156:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:36742:27567	.	NO_LDAS	0.0034	GT	1.9329	AG	1.6729	"[""INTERCHROMOSOMAL[chr1--chr9]""]"	chr1:203869920-chr9:33278156	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SNRPD3--CTF1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SNRPD3^ENSG00000100028.12	chr22:24572061:+	CTF1^ENSG00000150281.7	chr16:30902862:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:28207:18585	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr22--chr16]""]"	chr22:24572061-chr16:30902862	False			0	Read count too low: 1 < 8	FAIL	1
SNORC--RAMP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SNORC^ENSG00000182600.9	chr2:232876122:+	RAMP1^ENSG00000132329.11	chr2:237874645:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1254:50972:18726	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:4.98Mb]""]"	chr2:232876122-chr2:237874645	False			0	Read count too low: 1 < 8	FAIL	1
SNIP1--GNL2	1	0	1.0	0.0	ONLY_REF_SPLICE	SNIP1^ENSG00000163877.11	chr1:37554006:-	GNL2^ENSG00000134697.13	chr1:37569302:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1372:32899:14045	.	YES_LDAS	0.0034	GT	1.8892	AG	1.3996	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12523]""]"	chr1:37554006-chr1:37569302	False			0	Read count too low: 1 < 8	FAIL	1
SNHG5--MBD2	1	0	1.0	0.0	ONLY_REF_SPLICE	SNHG5^ENSG00000203875.13	chr6:85677954:-	MBD2^ENSG00000134046.12	chr18:54205157:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:48504:25493	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr18]""]"	chr6:85677954-chr18:54205157	False			0	Read count too low: 1 < 8	FAIL	1
SNAPC3--MUC6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SNAPC3^ENSG00000164975.15	chr9:15463501:+	MUC6^ENSG00000184956.16	chr11:1030386:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:8232:13779	.	NO_LDAS	0.0034	GT	1.231	AG	0.6998	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:15463501-chr11:1030386	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SNAPC3--GUCY2EP	1	0	0.33	0.0	INCL_NON_REF_SPLICE	SNAPC3^ENSG00000164975.15	chr9:15458048:+	GUCY2EP^ENSG00000204529.4	chr11:76707516:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2306:48804:26180	.	NO_LDAS	0.0011	GT	1.4566	AG	1.9899	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:15458048-chr11:76707516	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SNAI3-AS1--SEMA6A-AS1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SNAI3-AS1^ENSG00000260630.7	chr16:88686547:+	SEMA6A-AS1^ENSG00000248445.5	chr5:116447585:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1343:36426:14354	.	NO_LDAS	0.0017	GT	1.4295	AG	1.8062	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:88686547-chr5:116447585	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SMYD3--CEP170P1	1	0	1.0	0.0	ONLY_REF_SPLICE	SMYD3^ENSG00000185420.19	chr1:246355031:-	CEP170P1^ENSG00000154608.14	chr4:118488128:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1419:49718:4391	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr4]""]"	chr1:246355031-chr4:118488128	False			0	Read count too low: 1 < 8	FAIL	1
SMIM13--ATP7B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SMIM13^ENSG00000224531.6	chr6:11094389:+	ATP7B^ENSG00000123191.16	chr13:51940477:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:36289:9211	.	NO_LDAS	0.0034	GT	1.6895	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr13]""]"	chr6:11094389-chr13:51940477	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SMIM10L1--LINC01252	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SMIM10L1^ENSG00000256537.5	chr12:11190111:+	LINC01252^ENSG00000247157.7	chr12:11549590:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1268:42752:13401	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:0.37Mb]""]"	chr12:11190111-chr12:11549590	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SMC6--ZBTB3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SMC6^ENSG00000163029.16	chr2:17695152:-	ZBTB3^ENSG00000185670.9	chr11:62753282:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:41636:11691	.	NO_LDAS	0.0034	GT	1.3996	AG	1.7465	"[""INTERCHROMOSOMAL[chr2--chr11]""]"	chr2:17695152-chr11:62753282	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
SMC6--NOL10	1	0	1.0	0.0	ONLY_REF_SPLICE	SMC6^ENSG00000163029.16	chr2:17753626:-	NOL10^ENSG00000115761.16	chr2:10644372:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1431:13256:5526	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr2:6.97Mb]""]"	chr2:17753626-chr2:10644372	False			0	Read count too low: 1 < 8	FAIL	1
SMBD1P--MUC20	1	0	0.5	0.0	ONLY_REF_SPLICE	SMBD1P^ENSG00000283426.1	chr3:195708841:+	MUC20^ENSG00000176945.17	chr3:195724680:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2401:3338:9562	.	YES_LDAS	0.0017	GT	1.8892	AG	1.371	"[""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[9241]""]"	chr3:195708841-chr3:195724680	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SMAD6--CDC42EP5	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SMAD6^ENSG00000137834.15	chr15:66703471:+	CDC42EP5^ENSG00000167617.3	chr19:54465163:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:46895:6983	.	NO_LDAS	0.0017	GT	1.4295	AG	1.053	"[""INTERCHROMOSOMAL[chr15--chr19]""]"	chr15:66703471-chr19:54465163	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLCO6A1--INKA2	1	0	1.0	0.0	ONLY_REF_SPLICE	SLCO6A1^ENSG00000205359.10	chr5:102458382:-	INKA2^ENSG00000197852.12	chr1:111680774:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:38796:6157	.	YES_LDAS	0.0034	GT	1.5058	AG	1.7056	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:102458382-chr1:111680774	False			0	Read count too low: 1 < 8	FAIL	1
SLCO1A2--AC011029.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLCO1A2^ENSG00000084453.16	chr12:21395355:-	AC011029.1^ENSG00000287352.1	chr8:76306467:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1212:21354:28128	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr8]""]"	chr12:21395355-chr8:76306467	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SLC6A16--AC011450.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC6A16^ENSG00000063127.16	chr19:49311084:-	AC011450.1^ENSG00000197813.6	chr19:49332142:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:45819:17422	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8295	"[""INTRACHROMOSOMAL[chr19:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[6310]""]"	chr19:49311084-chr19:49332142	False			0	Read count too low: 1 < 8	FAIL	1
SLC50A1--AC010336.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC50A1^ENSG00000169241.19	chr1:155135991:+	AC010336.1^ENSG00000214248.2	chr19:7902246:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:15724:22383	.	NO_LDAS	0.0034	GT	1.5301	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:155135991-chr19:7902246	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC49A3--PAXIP1-DT	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC49A3^ENSG00000169026.13	chr4:686532:-	PAXIP1-DT^ENSG00000273344.1	chr7:155003962:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:9891:3228	.	YES_LDAS	0.0034	GT	1.3996	AG	1.3383	"[""INTERCHROMOSOMAL[chr4--chr7]""]"	chr4:686532-chr7:155003962	False			0	Read count too low: 1 < 8	FAIL	1
SLC45A1--CDCP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC45A1^ENSG00000162426.16	chr1:8325349:+	CDCP2^ENSG00000157211.11	chr1:54152885:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1298:21314:23574	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:45.79Mb]""]"	chr1:8325349-chr1:54152885	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC45A1--CDCP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC45A1^ENSG00000162426.16	chr1:8324726:+	CDCP2^ENSG00000157211.11	chr1:54152885:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2474:29404:4125	.	NO_LDAS	0.0034	GT	1.7232	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:45.79Mb]""]"	chr1:8324726-chr1:54152885	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC44A5--CTC-338M12.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC44A5^ENSG00000137968.16	chr1:75206646:-	CTC-338M12.4^ENSG00000233937.7	chr5:181256557:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:28069:3578	.	YES_LDAS	0.0034	AT	1.9656	AC	1.7819	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:75206646-chr5:181256557	False			0	Read count too low: 1 < 8	FAIL	1
SLC41A2--TMTC2	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC41A2^ENSG00000136052.9	chr12:104909655:-	TMTC2^ENSG00000179104.9	chr12:82857010:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:36879:9786	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:21.67Mb]""]"	chr12:104909655-chr12:82857010	False			0	Read count too low: 1 < 8	FAIL	1
SLC41A2--PPHLN1	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC41A2^ENSG00000136052.9	chr12:104927973:-	PPHLN1^ENSG00000134283.18	chr12:42459278:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2203:36240:24597	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9899	"[""INTRACHROMOSOMAL[chr12:62.34Mb]""]"	chr12:104927973-chr12:42459278	False			0	Read count too low: 1 < 8	FAIL	1
SLC39A1--ARL8A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC39A1^ENSG00000143570.19	chr1:153960666:-	ARL8A^ENSG00000143862.8	chr1:202138038:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1108:34889:7936	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:48.17Mb]""]"	chr1:153960666-chr1:202138038	False			0	Read count too low: 1 < 8	FAIL	1
SLC38A6--MNAT1	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC38A6^ENSG00000139974.16	chr14:61052135:+	MNAT1^ENSG00000020426.11	chr14:60968229:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:27810:18403	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[11149]""]"	chr14:61052135-chr14:60968229	False			0	Read count too low: 1 < 8	FAIL	1
SLC35E4--APLF	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC35E4^ENSG00000100036.13	chr22:30637069:+	APLF^ENSG00000169621.10	chr2:68587808:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:2246:12995	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr22--chr2]""]"	chr22:30637069-chr2:68587808	False			0	Read count too low: 1 < 8	FAIL	1
SLC35D3--DYNLRB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC35D3^ENSG00000182747.5	chr6:136924479:+	DYNLRB1^ENSG00000125971.17	chr20:34526272:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1449:22964:12616	.	NO_LDAS	0.0034	GT	1.6402	AG	1.6895	"[""INTERCHROMOSOMAL[chr6--chr20]""]"	chr6:136924479-chr20:34526272	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC35B2--UBXN7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC35B2^ENSG00000157593.19	chr6:44255176:-	UBXN7^ENSG00000163960.12	chr3:196356846:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1234:11477:19454	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:44255176-chr3:196356846	False			0	Read count too low: 1 < 8	FAIL	1
SLC30A7--AC093157.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC30A7^ENSG00000162695.12	chr1:100974902:+	AC093157.1^ENSG00000233184.7	chr1:101086852:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:28288:24302	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[44087]""]"	chr1:100974902-chr1:101086852	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SLC30A6--BRD8	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC30A6^ENSG00000152683.14	chr2:32209561:+	BRD8^ENSG00000112983.18	chr5:138172826:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1427:39233:23728	.	NO_LDAS	0.0034	GT	1.6895	AG	1.7232	"[""INTERCHROMOSOMAL[chr2--chr5]""]"	chr2:32209561-chr5:138172826	False			0	Read count too low: 1 < 8	FAIL	1
SLC30A1--EBP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC30A1^ENSG00000170385.10	chr1:211575436:-	EBP^ENSG00000147155.11	chrX:48522038:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:48213:17114	.	NO_LDAS	0.0034	AT	1.8062	AC	1.5546	"[""INTERCHROMOSOMAL[chr1--chrX]""]"	chr1:211575436-chrX:48522038	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC2A9--EMILIN3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC2A9^ENSG00000109667.12	chr4:9887567:-	EMILIN3^ENSG00000183798.5	chr20:41360116:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:6032:9547	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6402	"[""INTERCHROMOSOMAL[chr4--chr20]""]"	chr4:9887567-chr20:41360116	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC29A3--PAX3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC29A3^ENSG00000198246.9	chr10:71362366:+	PAX3^ENSG00000135903.20	chr2:222298765:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2305:51312:28983	.	NO_LDAS	0.0034	GT	1.4295	AG	1.1033	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:71362366-chr2:222298765	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC26A7--LRRC69	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC26A7^ENSG00000147606.9	chr8:91394039:+	LRRC69^ENSG00000214954.8	chr8:91102219:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:25019:11691	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS_OVERLAP:+:+:[9742]""]"	chr8:91394039-chr8:91102219	False			0	Read count too low: 1 < 8	FAIL	1
SLC25A25--POLA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC25A25^ENSG00000148339.12	chr9:128106257:+	POLA1^ENSG00000101868.13	chrX:24996215:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:42065:1112	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chrX]""]"	chr9:128106257-chrX:24996215	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SLC25A24--ZNF644	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC25A24^ENSG00000085491.17	chr1:108181941:-	ZNF644^ENSG00000122482.21	chr1:90941309:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:41968:11201	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTRACHROMOSOMAL[chr1:17.11Mb]""]"	chr1:108181941-chr1:90941309	False			0	Read count too low: 1 < 8	FAIL	1
SLC25A13--ELAPOR2	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC25A13^ENSG00000004864.14	chr7:96321942:-	ELAPOR2^ENSG00000164659.15	chr7:86926916:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:36701:25704	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTRACHROMOSOMAL[chr7:9.06Mb]""]"	chr7:96321942-chr7:86926916	False			0	Read count too low: 1 < 8	FAIL	1
SLC1A4--BPNT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC1A4^ENSG00000115902.11	chr2:65018596:+	BPNT2^ENSG00000104331.9	chr8:56980185:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1179:26144:5428	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr8]""]"	chr2:65018596-chr8:56980185	False			0	Read count too low: 1 < 8	FAIL	1
SLC18B1--MED23	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC18B1^ENSG00000146409.12	chr6:132796982:-	MED23^ENSG00000112282.18	chr6:131618519:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1358:47518:6353	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8062	"[""INTRACHROMOSOMAL[chr6:1.14Mb]""]"	chr6:132796982-chr6:131618519	False			0	Read count too low: 1 < 8	FAIL	1
SLC17A9--AP3M1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLC17A9^ENSG00000101194.18	chr20:62962722:+	AP3M1^ENSG00000185009.13	chr10:74138314:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:38125:5834	.	YES_LDAS	0.0034	GT	1.4295	AG	1.9329	"[""INTERCHROMOSOMAL[chr20--chr10]""]"	chr20:62962722-chr10:74138314	False			0	Read count too low: 1 < 8	FAIL	1
SLC11A2--MYBL1	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC11A2^ENSG00000110911.17	chr12:51006174:-	MYBL1^ENSG00000185697.16	chr8:66599142:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1342:31127:4363	.	NO_LDAS	0.0034	GC	1.9329	AG	1.8295	"[""INTERCHROMOSOMAL[chr12--chr8]""]"	chr12:51006174-chr8:66599142	False			0	Read count too low: 1 < 8	FAIL	1
SLC10A7--ZGRF1	1	0	1.0	0.0	ONLY_REF_SPLICE	SLC10A7^ENSG00000120519.15	chr4:146503849:-	ZGRF1^ENSG00000138658.16	chr4:112589874:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:6226:15909	.	YES_LDAS	0.0034	GT	1.5301	AG	1.8892	"[""INTRACHROMOSOMAL[chr4:33.62Mb]""]"	chr4:146503849-chr4:112589874	False			0	Read count too low: 1 < 8	FAIL	1
SLAMF1--PRICKLE1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SLAMF1^ENSG00000117090.15	chr1:160608271:-	PRICKLE1^ENSG00000139174.12	chr12:42464608:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:43982:17661	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:160608271-chr12:42464608	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SKA3--CDRT4	1	0	1.0	0.0	ONLY_REF_SPLICE	SKA3^ENSG00000165480.16	chr13:21176375:-	CDRT4^ENSG00000239704.11	chr17:15440285:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:49176:16988	.	YES_LDAS	0.0034	GT	1.4295	AG	1.9899	"[""INTERCHROMOSOMAL[chr13--chr17]""]"	chr13:21176375-chr17:15440285	False			0	Read count too low: 1 < 8	FAIL	1
SIX3--AC012354.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SIX3^ENSG00000138083.5	chr2:44944727:+	AC012354.1^ENSG00000225156.2	chr2:44967696:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:49605:22243	.	NO_LDAS	0.0034	GT	1.6402	AG	1.5301	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""NEIGHBORS[8593]""]"	chr2:44944727-chr2:44967696	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SIVA1--SNX30	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SIVA1^ENSG00000184990.13	chr14:104753312:+	SNX30^ENSG00000148158.17	chr9:112874110:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2453:29291:14886	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr14--chr9]""]"	chr14:104753312-chr9:112874110	False			0	Read count too low: 1 < 8	FAIL	1
SIRT6--ADAT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SIRT6^ENSG00000077463.15	chr19:4180782:-	ADAT2^ENSG00000189007.16	chr6:143425062:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:43909:17142	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8323	"[""INTERCHROMOSOMAL[chr19--chr6]""]"	chr19:4180782-chr6:143425062	False			0	Read count too low: 1 < 8	FAIL	1
SIMC1--PSRC1	1	0	1.0	0.0	ONLY_REF_SPLICE	SIMC1^ENSG00000170085.18	chr5:176337146:+	PSRC1^ENSG00000134222.16	chr1:109281251:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:39411:18375	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:176337146-chr1:109281251	False			0	Read count too low: 1 < 8	FAIL	1
SHPK--LINC02395	1	0	1.0	0.0	ONLY_REF_SPLICE	SHPK^ENSG00000197417.9	chr17:3615337:-	LINC02395^ENSG00000257771.6	chr12:49920006:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1184:29841:13485	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr12]""]"	chr17:3615337-chr12:49920006	False			0	Read count too low: 1 < 8	FAIL	1
SHC2--COPS9	1	0	1.0	0.0	ONLY_REF_SPLICE	SHC2^ENSG00000129946.10	chr19:430684:-	COPS9^ENSG00000172428.11	chr2:240134005:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:20416:9379	.	NO_LDAS	0.0034	GT	1.9086	AG	1.5058	"[""INTERCHROMOSOMAL[chr19--chr2]""]"	chr19:430684-chr2:240134005	False			0	Read count too low: 1 < 8	FAIL	1
SH2B2--PHETA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SH2B2^ENSG00000160999.10	chr7:102300595:+	PHETA1^ENSG00000198324.13	chr12:111362995:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1428:8661:16512	.	NO_LDAS	0.0034	GT	1.4716	AG	1.3383	"[""INTERCHROMOSOMAL[chr7--chr12]""]"	chr7:102300595-chr12:111362995	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SGPP1--DEGS1	1	0	1.0	0.0	ONLY_REF_SPLICE	SGPP1^ENSG00000126821.8	chr14:63727261:-	DEGS1^ENSG00000143753.13	chr1:224189577:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:35488:16568	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr14--chr1]""]"	chr14:63727261-chr1:224189577	False			0	Read count too low: 1 < 8	FAIL	1
SGMS2--ZNF639	1	0	1.0	0.0	ONLY_REF_SPLICE	SGMS2^ENSG00000164023.14	chr4:107858553:+	ZNF639^ENSG00000121864.10	chr3:179332989:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1377:23070:7642	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr3]""]"	chr4:107858553-chr3:179332989	False			0	Read count too low: 1 < 8	FAIL	1
SGK3--WWP1	1	0	1.0	0.0	ONLY_REF_SPLICE	SGK3^ENSG00000104205.16	chr8:66712833:+	WWP1^ENSG00000123124.14	chr8:86411538:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1179:27017:24204	.	NO_LDAS	0.0034	GT	1.4295	AG	1.7819	"[""INTRACHROMOSOMAL[chr8:19.48Mb]""]"	chr8:66712833-chr8:86411538	False			0	Read count too low: 1 < 8	FAIL	1
SGK2--L3MBTL1	1	0	1.0	0.0	ONLY_REF_SPLICE	SGK2^ENSG00000101049.17	chr20:43580061:+	L3MBTL1^ENSG00000185513.17	chr20:43528657:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1482:16201:7320	.	YES_LDAS	0.0034	GT	1.9329	AG	1.6895	"[""INTRACHROMOSOMAL[chr20:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8014]""]"	chr20:43580061-chr20:43528657	False			0	Read count too low: 1 < 8	FAIL	1
SFXN5--IK	1	0	1.0	0.0	ONLY_REF_SPLICE	SFXN5^ENSG00000144040.13	chr2:73042488:-	IK^ENSG00000113141.18	chr5:140651714:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2456:7237:13149	.	YES_LDAS	0.0034	GT	1.9329	AG	1.3996	"[""INTERCHROMOSOMAL[chr2--chr5]""]"	chr2:73042488-chr5:140651714	False			0	Read count too low: 1 < 8	FAIL	1
SFXN5--CTAGE4	1	0	0.2	0.0	INCL_NON_REF_SPLICE	SFXN5^ENSG00000144040.13	chr2:72968493:-	CTAGE4^ENSG00000225932.3	chr7:144183513:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2330:37526:11355	.	NO_LDAS	0.0007	GC	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr2--chr7]""]"	chr2:72968493-chr7:144183513	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SETD6--NDRG4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SETD6^ENSG00000103037.12	chr16:58515846:+	NDRG4^ENSG00000103034.14	chr16:58511213:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:26111:8202	.	YES_LDAS	0.0034	GT	1.8256	AG	1.6895	"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[1851]""]"	chr16:58515846-chr16:58511213	False			0	Read count too low: 1 < 8	FAIL	1
SENP7--GK5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SENP7^ENSG00000138468.16	chr3:101332091:-	GK5^ENSG00000175066.16	chr3:142225416:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:1218:25171	.	NO_LDAS	0.0034	GT	1.9656	AG	1.6895	"[""INTRACHROMOSOMAL[chr3:40.64Mb]""]"	chr3:101332091-chr3:142225416	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SEMA4C--GGA2	1	0	1.0	0.0	ONLY_REF_SPLICE	SEMA4C^ENSG00000168758.11	chr2:96863682:-	GGA2^ENSG00000103365.15	chr16:23486790:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1404:14357:3957	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:96863682-chr16:23486790	False			0	Read count too low: 1 < 8	FAIL	1
SEMA3F--AC104984.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SEMA3F^ENSG00000001617.12	chr3:50159734:+	AC104984.1^ENSG00000264125.1	chr17:30205996:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:4034:1434	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9899	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:50159734-chr17:30205996	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SEM1--PARP2	1	0	1.0	0.0	ONLY_REF_SPLICE	SEM1^ENSG00000127922.9	chr7:96709688:-	PARP2^ENSG00000129484.14	chr14:20354085:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1233:20052:24415	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5329	"[""INTERCHROMOSOMAL[chr7--chr14]""]"	chr7:96709688-chr14:20354085	False			0	Read count too low: 1 < 8	FAIL	1
SELENOT--SCFD2	1	0	1.0	0.0	ONLY_REF_SPLICE	SELENOT^ENSG00000198843.13	chr3:150603499:+	SCFD2^ENSG00000184178.16	chr4:53313763:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2253:37001:3522	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7056	"[""INTERCHROMOSOMAL[chr3--chr4]""]"	chr3:150603499-chr4:53313763	False			0	Read count too low: 1 < 8	FAIL	1
SELENOT--POLR2H	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SELENOT^ENSG00000198843.13	chr3:150603499:+	POLR2H^ENSG00000163882.9	chr3:184365467:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:33457:11285	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:33.73Mb]""]"	chr3:150603499-chr3:184365467	False			0	Read count too low: 1 < 8	FAIL	1
SELENOF--GTF2B	1	0	1.0	0.0	ONLY_REF_SPLICE	SELENOF^ENSG00000183291.17	chr1:86903281:-	GTF2B^ENSG00000137947.12	chr1:88864114:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:39937:6899	.	NO_LDAS	0.0034	GT	1.7232	AG	1.8323	"[""INTRACHROMOSOMAL[chr1:1.94Mb]""]"	chr1:86903281-chr1:88864114	False			0	Read count too low: 1 < 8	FAIL	1
SECISBP2L--COPS2	1	0	1.0	0.0	ONLY_REF_SPLICE	SECISBP2L^ENSG00000138593.9	chr15:49027365:-	COPS2^ENSG00000166200.15	chr15:49119167:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1171:38513:24471	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9329	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr15:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[59621]""]"	chr15:49027365-chr15:49119167	False			0	Read count too low: 1 < 8	FAIL	1
SEC62--SLC37A3	1	0	1.0	0.0	ONLY_REF_SPLICE	SEC62^ENSG00000008952.17	chr3:169977051:+	SLC37A3^ENSG00000157800.18	chr7:140382596:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1489:43885:9309	.	YES_LDAS	0.0034	GT	1.9656	AG	1.3996	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:169977051-chr7:140382596	False			0	Read count too low: 1 < 8	FAIL	1
SEC61G--AC005520.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SEC61G^ENSG00000132432.14	chr7:54755781:-	AC005520.2^ENSG00000259065.2	chr14:73787951:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:44735:11509	.	NO_LDAS	0.0034	GT	1.4295	AG	1.7232	"[""INTERCHROMOSOMAL[chr7--chr14]""]"	chr7:54755781-chr14:73787951	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SEC24D--TAF1B	1	0	1.0	0.0	ONLY_REF_SPLICE	SEC24D^ENSG00000150961.15	chr4:118728561:-	TAF1B^ENSG00000115750.17	chr2:9845220:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1286:18078:26909	.	YES_LDAS	0.0034	GT	1.8892	AG	1.4566	"[""INTERCHROMOSOMAL[chr4--chr2]""]"	chr4:118728561-chr2:9845220	False			0	Read count too low: 1 < 8	FAIL	1
SEC24B-AS1--COL25A1	1	0	1.0	0.0	ONLY_REF_SPLICE	SEC24B-AS1^ENSG00000247950.7	chr4:109362752:-	COL25A1^ENSG00000188517.16	chr4:109302075:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2117:48181:27932	.	YES_LDAS	0.0034	GT	1.7968	AG	1.5058	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.04Mb]"",""NEIGHBORS[44723]""]"	chr4:109362752-chr4:109302075	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SEC22A--ABCC5	1	0	1.0	0.0	ONLY_REF_SPLICE	SEC22A^ENSG00000121542.12	chr3:123201986:+	ABCC5^ENSG00000114770.17	chr3:183953270:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2225:29056:6100	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr3:60.65Mb]""]"	chr3:123201986-chr3:183953270	False			0	Read count too low: 1 < 8	FAIL	1
SEC11A--HSPH1	1	0	1.0	0.0	ONLY_REF_SPLICE	SEC11A^ENSG00000140612.14	chr15:84716025:-	HSPH1^ENSG00000120694.20	chr13:31148092:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1185:14599:21444	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr15--chr13]""]"	chr15:84716025-chr13:31148092	False			0	Read count too low: 1 < 8	FAIL	1
SDR9C7--RDH16	1	0	1.0	0.0	ONLY_REF_SPLICE	SDR9C7^ENSG00000170426.2	chr12:56930226:-	RDH16^ENSG00000139547.8	chr12:56952990:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1392:15141:29193	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9899	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr12:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[17023]""]"	chr12:56930226-chr12:56952990	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
SDCBP2-AS1--DZANK1	1	0	1.0	0.0	ONLY_REF_SPLICE	SDCBP2-AS1^ENSG00000234684.7	chr20:1325529:+	DZANK1^ENSG00000089091.16	chr20:18398626:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1336:13912:25802	.	YES_LDAS	0.0034	GT	1.6049	AG	1.8323	"[""INTRACHROMOSOMAL[chr20:17.00Mb]""]"	chr20:1325529-chr20:18398626	False			0	Read count too low: 1 < 8	FAIL	1
SCLT1--TNNT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SCLT1^ENSG00000151466.12	chr4:128871361:-	TNNT2^ENSG00000118194.20	chr1:201372038:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2251:34776:18249	.	NO_LDAS	0.0034	GC	1.2867	AG	1.9329	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:128871361-chr1:201372038	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
SCIN--AC013470.2	1	0	1.0	0.0	ONLY_REF_SPLICE	SCIN^ENSG00000006747.15	chr7:12570985:+	AC013470.2^ENSG00000226690.8	chr7:12528902:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2429:25836:16385	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9899	"[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28355]""]"	chr7:12570985-chr7:12528902	False			0	Read count too low: 1 < 8	FAIL	1
SAV1--GPHN	1	0	1.0	0.0	ONLY_REF_SPLICE	SAV1^ENSG00000151748.15	chr14:50644744:-	GPHN^ENSG00000171723.16	chr14:66824474:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1285:5959:17801	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""INTRACHROMOSOMAL[chr14:15.84Mb]""]"	chr14:50644744-chr14:66824474	False			0	Read count too low: 1 < 8	FAIL	1
SASH1--SAMD5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SASH1^ENSG00000111961.18	chr6:148468555:+	SAMD5^ENSG00000203727.4	chr6:147508766:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:44500:11944	.	NO_LDAS	0.0034	AT	1.8892	TC	1.7465	"[""ChimerKB"",""ChimerPub"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr6:0.70Mb]""]"	chr6:148468555-chr6:147508766	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
SARDH--AC087623.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	SARDH^ENSG00000123453.18	chr9:133690522:-	AC087623.1^ENSG00000255201.1	chr8:38421856:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:33465:28114	.	NO_LDAS	0.0017	GT	1.9086	AG	1.7465	"[""INTERCHROMOSOMAL[chr9--chr8]""]"	chr9:133690522-chr8:38421856	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
SAMD5--AL033504.1	1	0	1.0	0.0	ONLY_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	AL033504.1^ENSG00000227681.5	chr6:147733729:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1461:10514:2850	.	NO_LDAS	0.0034	GT	1.8295	AG	1.5219	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"	chr6:147509387-chr6:147733729	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
SAMD5--AL033504.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	SAMD5^ENSG00000203727.4	chr6:147509387:+	AL033504.1^ENSG00000227681.5	chr6:147692400:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:50487:28366	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6895	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[90682]""]"	chr6:147509387-chr6:147692400	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
SAMD13--DNASE2B	1	0	1.0	0.0	ONLY_REF_SPLICE	SAMD13^ENSG00000203943.9	chr1:84325748:+	DNASE2B^ENSG00000137976.8	chr1:84401901:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:46061:29137	.	YES_LDAS	0.0034	GT	1.9899	AG	1.4716	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8527]""]"	chr1:84325748-chr1:84401901	False			0	Read count too low: 1 < 8	FAIL	1
SAA1--HPS5	1	0	0.5	0.0	ONLY_REF_SPLICE	SAA1^ENSG00000173432.12	chr11:18269333:+	HPS5^ENSG00000110756.18	chr11:18317907:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:9373:1350	.	YES_LDAS	0.0017	GT	1.9656	AG	1.8256	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_INVERSION:+:-:[8691]""]"	chr11:18269333-chr11:18317907	False			0	Read count too low: 1 < 8	FAIL	1
S100A13--RNF11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	S100A13^ENSG00000189171.14	chr1:153626320:-	RNF11^ENSG00000123091.5	chr1:51236734:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1367:49281:24653	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6402	"[""INTRACHROMOSOMAL[chr1:102.35Mb]""]"	chr1:153626320-chr1:51236734	False			0	Read count too low: 1 < 8	FAIL	1
RXYLT1--AMN1	1	0	1.0	0.0	ONLY_REF_SPLICE	RXYLT1^ENSG00000118600.12	chr12:63785072:+	AMN1^ENSG00000151743.11	chr12:31702007:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:29355:11888	.	NO_LDAS	0.0034	GT	1.6729	AG	1.7819	"[""INTRACHROMOSOMAL[chr12:32.05Mb]""]"	chr12:63785072-chr12:31702007	False			0	Read count too low: 1 < 8	FAIL	1
RWDD2B--USP16	1	0	1.0	0.0	ONLY_REF_SPLICE	RWDD2B^ENSG00000156253.7	chr21:29019211:-	USP16^ENSG00000156256.15	chr21:29027873:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2181:28546:8553	.	YES_LDAS	0.0034	GT	1.7819	AG	1.2419	"[""INTRACHROMOSOMAL[chr21:0.01Mb]"",""LOCAL_INVERSION:-:+:[5269]""]"	chr21:29019211-chr21:29027873	False			0	Read count too low: 1 < 8	FAIL	1
RTCA--MFSD14A	1	0	1.0	0.0	ONLY_REF_SPLICE	RTCA^ENSG00000137996.13	chr1:100274965:+	MFSD14A^ENSG00000156875.14	chr1:100049909:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:16112:15937	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.18Mb]""]"	chr1:100274965-chr1:100049909	False			0	Read count too low: 1 < 8	FAIL	1
RSU1--PGBD2	1	0	1.0	0.0	ONLY_REF_SPLICE	RSU1^ENSG00000148484.18	chr10:16752539:-	PGBD2^ENSG00000185220.12	chr1:248917279:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2311:22649:12126	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:16752539-chr1:248917279	False			0	Read count too low: 1 < 8	FAIL	1
RSU1--MINDY3	1	0	1.0	0.0	ONLY_REF_SPLICE	RSU1^ENSG00000148484.18	chr10:16752539:-	MINDY3^ENSG00000148481.14	chr10:15821726:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:4317:29109	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr10:0.73Mb]""]"	chr10:16752539-chr10:15821726	False			0	Read count too low: 1 < 8	FAIL	1
RSU1--IFT74	1	0	1.0	0.0	ONLY_REF_SPLICE	RSU1^ENSG00000148484.18	chr10:16752539:-	IFT74^ENSG00000096872.17	chr9:27044742:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1172:34120:24232	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:16752539-chr9:27044742	False			0	Read count too low: 1 < 8	FAIL	1
RSU1--CCDC13	1	0	1.0	0.0	ONLY_REF_SPLICE	RSU1^ENSG00000148484.18	chr10:16816973:-	CCDC13^ENSG00000244607.7	chr3:42758351:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1267:5498:14816	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:16816973-chr3:42758351	False			0	Read count too low: 1 < 8	FAIL	1
RSPH6A--SLFNL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RSPH6A^ENSG00000104941.8	chr19:45814710:-	SLFNL1^ENSG00000171790.15	chr1:41017311:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1337:38125:15110	.	NO_LDAS	0.0034	GT	1.7056	AG	1.5329	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:45814710-chr1:41017311	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RRP8--CCHCR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RRP8^ENSG00000132275.11	chr11:6592720:-	CCHCR1^ENSG00000204536.14	chr6:31148728:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1316:31880:4265	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:6592720-chr6:31148728	False			0	Read count too low: 1 < 8	FAIL	1
RPUSD3--NDUFB2	1	0	1.0	0.0	ONLY_REF_SPLICE	RPUSD3^ENSG00000156990.14	chr3:9841983:-	NDUFB2^ENSG00000090266.13	chr7:140706563:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2346:34921:4545	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:9841983-chr7:140706563	False			0	Read count too low: 1 < 8	FAIL	1
RPS17P5--AL355375.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPS17P5^ENSG00000060303.5	chr6:50857435:-	AL355375.1^ENSG00000217067.2	chr6:62547518:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:2885:18081	.	NO_LDAS	0.0034	GT	1.6895	AG	1.7465	"[""INTRACHROMOSOMAL[chr6:11.69Mb]""]"	chr6:50857435-chr6:62547518	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPP38--TTC21B	1	0	1.0	0.0	ONLY_REF_SPLICE	RPP38^ENSG00000152464.15	chr10:15102336:+	TTC21B^ENSG00000123607.16	chr2:165871020:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2119:22422:26951	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:15102336-chr2:165871020	False			0	Read count too low: 1 < 8	FAIL	1
RPL36AP29--AC018868.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	RPL36AP29^ENSG00000224683.1	chr7:16209154:+	AC018868.1^ENSG00000231409.3	chr15:34943290:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1130:5595:24344	.	NO_LDAS	0.0017	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:16209154-chr15:34943290	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPL36A--CENPI	1	0	1.0	0.0	ONLY_REF_SPLICE	RPL36A^ENSG00000241343.10	chrX:101391822:+	CENPI^ENSG00000102384.13	chrX:101101058:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:51773:21318	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTRACHROMOSOMAL[chrX:0.23Mb]""]"	chrX:101391822-chrX:101101058	True	read_through|ribosomal genes|RPL36A; read_through|ribosomal genes|RPL36A-HNRNPH2		0	Blacklisted	FAIL	1
RPL34--OSTCP5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPL34^ENSG00000109475.17	chr4:108630141:+	OSTCP5^ENSG00000234315.1	chr1:45070290:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:26111:27147	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5219	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:108630141-chr1:45070290	False			0	Read count too low: 1 < 8	FAIL	1
RPL32P3--FAM177A1	1	0	1.0	0.0	ONLY_REF_SPLICE	RPL32P3^ENSG00000251474.6	chr3:129393635:-	FAM177A1^ENSG00000151327.13	chr14:35046505:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:17334:28842	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr3--chr14]""]"	chr3:129393635-chr14:35046505	False			0	Read count too low: 1 < 8	FAIL	1
RPL23AP8--RPL23AP42	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPL23AP8^ENSG00000241582.1	chr14:34694565:+	RPL23AP42^ENSG00000234851.4	chr3:161429579:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2277:31321:17563	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr3]""]"	chr14:34694565-chr3:161429579	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPF2--ETS2	1	0	1.0	0.0	ONLY_REF_SPLICE	RPF2^ENSG00000197498.13	chr6:110985138:+	ETS2^ENSG00000157557.13	chr21:38810035:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2405:28555:7081	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8256	"[""INTERCHROMOSOMAL[chr6--chr21]""]"	chr6:110985138-chr21:38810035	False			0	Read count too low: 1 < 8	FAIL	1
RPEL1--TSSK3	1	0	0.5	0.0	INCL_NON_REF_SPLICE	RPEL1^ENSG00000235376.5	chr10:103246527:+	TSSK3^ENSG00000162526.7	chr1:32362662:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:50980:7278	.	NO_LDAS	0.0017	GT	1.5546	AG	1.7968	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:103246527-chr1:32362662	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RPA2--HOXA-AS3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RPA2^ENSG00000117748.10	chr1:27914059:-	HOXA-AS3^ENSG00000254369.6	chr7:27155300:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2240:37818:20351	.	NO_LDAS	0.0034	GT	1.5546	AG	1.3753	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:27914059-chr7:27155300	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RNVU1-34--LONRF1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNVU1-34^ENSG00000200997.1	chr17:58679639:-	LONRF1^ENSG00000154359.13	chr8:12735400:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1260:19437:22229	.	YES_LDAS	0.0034	GT	1.7056	AG	1.6402	"[""INTERCHROMOSOMAL[chr17--chr8]""]"	chr17:58679639-chr8:12735400	False			0	Read count too low: 1 < 8	FAIL	1
RNVU1-27--KRTDAP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNVU1-27^ENSG00000274210.1	chr1:148522796:+	KRTDAP^ENSG00000188508.11	chr19:35488485:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:18240:5358	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:148522796-chr19:35488485	False			0	Read count too low: 1 < 8	FAIL	1
RNVU1-15--PLS3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNVU1-15^ENSG00000207205.1	chr1:144412764:+	PLS3^ENSG00000102024.18	chrX:115645021:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:38999:23574	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chrX]""]"	chr1:144412764-chrX:115645021	False			0	Read count too low: 1 < 8	FAIL	1
RNU2-63P--RNF166	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNU2-63P^ENSG00000222724.1	chr2:88016333:-	RNF166^ENSG00000158717.11	chr16:88701418:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2335:51813:25003	.	YES_LDAS	0.0034	GT	1.7232	AG	1.6402	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:88016333-chr16:88701418	False			0	Read count too low: 1 < 8	FAIL	1
RNGTT--ZHX2	1	0	1.0	0.0	ONLY_REF_SPLICE	RNGTT^ENSG00000111880.16	chr6:88678353:-	ZHX2^ENSG00000178764.8	chr8:122973242:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1236:4018:16876	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr6--chr8]""]"	chr6:88678353-chr8:122973242	False			0	Read count too low: 1 < 8	FAIL	1
RNF8--AC004637.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNF8^ENSG00000112130.17	chr6:37354275:+	AC004637.1^ENSG00000267304.1	chr19:3674156:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:22261:25353	.	NO_LDAS	0.0034	GT	1.6402	AG	1.8323	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:37354275-chr19:3674156	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RNF6--CDK8	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF6^ENSG00000127870.17	chr13:26215474:-	CDK8^ENSG00000132964.12	chr13:26337567:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1363:26257:17310	.	YES_LDAS	0.0034	GT	1.9656	AG	1.3996	"[""INTRACHROMOSOMAL[chr13:0.03Mb]"",""LOCAL_INVERSION:-:+:[31790]""]"	chr13:26215474-chr13:26337567	False			0	Read count too low: 1 < 8	FAIL	1
RNF5--TSBP1-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNF5^ENSG00000204308.8	chr6:32212417:+	TSBP1-AS1^ENSG00000225914.3	chr6:32365780:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:4535:1743	.	YES_LDAS	0.0034	GT	1.5058	AG	1.8323	"[""INTRACHROMOSOMAL[chr6:0.07Mb]"",""NEIGHBORS[73847]""]"	chr6:32212417-chr6:32365780	False			0	Read count too low: 1 < 8	FAIL	1
RNF24--WDR37	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF24^ENSG00000101236.17	chr20:4015437:-	WDR37^ENSG00000047056.16	chr10:1080011:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2143:5797:10290	.	YES_LDAS	0.0034	GT	1.3996	AG	1.8892	"[""INTERCHROMOSOMAL[chr20--chr10]""]"	chr20:4015437-chr10:1080011	False			0	Read count too low: 1 < 8	FAIL	1
RNF217--PDSS2	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF217^ENSG00000146373.16	chr6:124963426:+	PDSS2^ENSG00000164494.12	chr6:107334332:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:28393:17450	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr6:17.50Mb]""]"	chr6:124963426-chr6:107334332	False			0	Read count too low: 1 < 8	FAIL	1
RNF2--ACBD6	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF2^ENSG00000121481.11	chr1:185045649:+	ACBD6^ENSG00000230124.8	chr1:180397605:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1492:2586:11061	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:4.54Mb]""]"	chr1:185045649-chr1:180397605	False			0	Read count too low: 1 < 8	FAIL	1
RNF144A--MXD4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RNF144A^ENSG00000151692.15	chr2:6996993:+	MXD4^ENSG00000123933.17	chr4:2253346:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:32907:24148	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:6996993-chr4:2253346	False			0	Read count too low: 1 < 8	FAIL	1
RNF141--IRAG1	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF141^ENSG00000110315.7	chr11:10541122:-	IRAG1^ENSG00000072952.19	chr11:10652182:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2134:29339:10935	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[31861]""]"	chr11:10541122-chr11:10652182	False			0	Read count too low: 1 < 8	FAIL	1
RNF139--NDUFV3	1	0	1.0	0.0	ONLY_REF_SPLICE	RNF139^ENSG00000170881.5	chr8:124475290:+	NDUFV3^ENSG00000160194.18	chr21:42908864:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:3573:27427	.	YES_LDAS	0.0034	GT	1.5219	AG	1.7465	"[""INTERCHROMOSOMAL[chr8--chr21]""]"	chr8:124475290-chr21:42908864	False			0	Read count too low: 1 < 8	FAIL	1
RNASET2--RNGTT	1	0	1.0	0.0	ONLY_REF_SPLICE	RNASET2^ENSG00000026297.16	chr6:166956097:-	RNGTT^ENSG00000111880.16	chr6:88614395:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2478:33336:13317	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTRACHROMOSOMAL[chr6:77.96Mb]""]"	chr6:166956097-chr6:88614395	False			0	Read count too low: 1 < 8	FAIL	1
RN7SL79P--SPC24	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RN7SL79P^ENSG00000239595.3	chr17:31465757:+	SPC24^ENSG00000161888.11	chr19:11146740:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:44775:25115	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""INTERCHROMOSOMAL[chr17--chr19]""]"	chr17:31465757-chr19:11146740	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RIOK3--OAS3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RIOK3^ENSG00000101782.15	chr18:23477205:+	OAS3^ENSG00000111331.14	chr12:112964096:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:47873:13499	.	NO_LDAS	0.0034	GT	1.9899	AG	1.5329	"[""INTERCHROMOSOMAL[chr18--chr12]""]"	chr18:23477205-chr12:112964096	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RIOK2--DEPDC1B	1	0	1.0	0.0	ONLY_REF_SPLICE	RIOK2^ENSG00000058729.11	chr5:97177116:-	DEPDC1B^ENSG00000035499.13	chr5:60687227:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2416:12172:21724	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:36.46Mb]""]"	chr5:97177116-chr5:60687227	False			0	Read count too low: 1 < 8	FAIL	1
RIOK1--CCDC102A	1	0	1.0	0.0	ONLY_REF_SPLICE	RIOK1^ENSG00000124784.9	chr6:7411451:+	CCDC102A^ENSG00000135736.6	chr16:57516463:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:48650:25101	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr16]""]"	chr6:7411451-chr16:57516463	False			0	Read count too low: 1 < 8	FAIL	1
RINT1--PEX7	1	0	1.0	0.0	ONLY_REF_SPLICE	RINT1^ENSG00000135249.8	chr7:105536749:+	PEX7^ENSG00000112357.14	chr6:136866627:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2368:17123:10486	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9899	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:105536749-chr6:136866627	False			0	Read count too low: 1 < 8	FAIL	1
RGSL1--CMC1	1	0	1.0	0.0	ONLY_REF_SPLICE	RGSL1^ENSG00000121446.20	chr1:182507266:+	CMC1^ENSG00000187118.14	chr3:28316333:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:34719:13947	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:182507266-chr3:28316333	False			0	Read count too low: 1 < 8	FAIL	1
RGS6--AC005993.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RGS6^ENSG00000182732.18	chr14:72018942:+	AC005993.1^ENSG00000266869.2	chr14:71915873:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:21007:6479	.	NO_LDAS	0.0034	GT	1.7465	AG	1.7056	"[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3833]""]"	chr14:72018942-chr14:71915873	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RGPD1--KCNIP2	1	0	0.14	0.0	INCL_NON_REF_SPLICE	RGPD1^ENSG00000187627.17	chr2:86984848:+	KCNIP2^ENSG00000120049.20	chr10:101826331:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1304:14235:18207	.	NO_LDAS	0.0005	GT	1.9086	AG	1.5656	"[""INTERCHROMOSOMAL[chr2--chr10]""]"	chr2:86984848-chr10:101826331	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RGMA--NUP50	1	0	1.0	0.0	ONLY_REF_SPLICE	RGMA^ENSG00000182175.14	chr15:93072916:-	NUP50^ENSG00000093000.19	chr22:45178238:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2148:31847:27301	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr22]""]"	chr15:93072916-chr22:45178238	False			0	Read count too low: 1 < 8	FAIL	1
RFXANK--GLI2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RFXANK^ENSG00000064490.14	chr19:19198150:+	GLI2^ENSG00000074047.22	chr2:120955341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:23377:16273	.	NO_LDAS	0.0034	GT	1.7819	AG	1.3753	"[""INTERCHROMOSOMAL[chr19--chr2]""]"	chr19:19198150-chr2:120955341	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RFX2--E2F1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RFX2^ENSG00000087903.13	chr19:6016261:-	E2F1^ENSG00000101412.13	chr20:33678353:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:49047:23770	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5301	"[""INTERCHROMOSOMAL[chr19--chr20]""]"	chr19:6016261-chr20:33678353	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RFK--REL	1	0	1.0	0.0	ONLY_REF_SPLICE	RFK^ENSG00000135002.12	chr9:76394090:-	REL^ENSG00000162924.15	chr2:60920574:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2312:13596:5722	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr9--chr2]""]"	chr9:76394090-chr2:60920574	False			0	Read count too low: 1 < 8	FAIL	1
RFC1--SOX9-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RFC1^ENSG00000035928.16	chr4:39351348:-	SOX9-AS1^ENSG00000234899.11	chr17:72088513:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1452:17277:18908	.	NO_LDAS	0.0034	GT	1.5546	AG	1.9899	"[""INTERCHROMOSOMAL[chr4--chr17]""]"	chr4:39351348-chr17:72088513	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
REXO4--ZCCHC24	1	0	1.0	0.0	INCL_NON_REF_SPLICE	REXO4^ENSG00000148300.12	chr9:133417738:-	ZCCHC24^ENSG00000165424.7	chr10:79432626:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1352:12132:27371	.	NO_LDAS	0.0034	GT	1.053	AG	1.2419	"[""INTERCHROMOSOMAL[chr9--chr10]""]"	chr9:133417738-chr10:79432626	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RELB--AC105460.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RELB^ENSG00000104856.14	chr19:45032749:+	AC105460.1^ENSG00000250920.3	chr4:103552148:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:26742:28268	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9219	"[""INTERCHROMOSOMAL[chr19--chr4]""]"	chr19:45032749-chr4:103552148	False			0	Read count too low: 1 < 8	FAIL	1
RBM6--ILKAP	1	0	1.0	0.0	ONLY_REF_SPLICE	RBM6^ENSG00000004534.15	chr3:49940225:+	ILKAP^ENSG00000132323.9	chr2:238194870:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:33619:15012	.	YES_LDAS	0.0034	GT	1.7819	AG	1.6895	"[""INTERCHROMOSOMAL[chr3--chr2]""]"	chr3:49940225-chr2:238194870	False			0	Read count too low: 1 < 8	FAIL	1
RBM47--AC008079.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RBM47^ENSG00000163694.15	chr4:40437767:-	AC008079.1^ENSG00000280007.1	chr22:18114308:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:47647:17647	.	NO_LDAS	0.0034	GT	1.8062	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr22]""]"	chr4:40437767-chr22:18114308	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RBM46--LRAT	1	0	1.0	0.0	ONLY_REF_SPLICE	RBM46^ENSG00000151962.8	chr4:154799564:+	LRAT^ENSG00000121207.12	chr4:154748189:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:41766:4797	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8295	"[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28093]""]"	chr4:154799564-chr4:154748189	False			0	Read count too low: 1 < 8	FAIL	1
RBM44--SDF2	1	0	1.0	0.0	ONLY_REF_SPLICE	RBM44^ENSG00000177483.12	chr2:237827503:+	SDF2^ENSG00000132581.10	chr17:28655483:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1182:45438:1687	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr2--chr17]""]"	chr2:237827503-chr17:28655483	False			0	Read count too low: 1 < 8	FAIL	1
RBM41--GRIN2A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RBM41^ENSG00000089682.16	chrX:107115862:-	GRIN2A^ENSG00000183454.18	chr16:9755172:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:27705:29291	.	NO_LDAS	0.0034	GT	1.8256	AG	1.5546	"[""INTERCHROMOSOMAL[chrX--chr16]""]"	chrX:107115862-chr16:9755172	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RBAK--AC092032.2	1	0	1.0	0.0	ONLY_REF_SPLICE	RBAK^ENSG00000146587.18	chr7:5048091:+	AC092032.2^ENSG00000288620.1	chr7:4989063:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2208:36022:28058	.	YES_LDAS	0.0034	GT	1.9219	AG	1.7819	"[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[56644]""]"	chr7:5048091-chr7:4989063	False			0	Read count too low: 1 < 8	FAIL	1
RASSF8--DCP1A	1	0	1.0	0.0	ONLY_REF_SPLICE	RASSF8^ENSG00000123094.15	chr12:25995130:+	DCP1A^ENSG00000272886.6	chr3:53292827:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:47064:24316	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:25995130-chr3:53292827	False			0	Read count too low: 1 < 8	FAIL	1
RASSF3--TRMT11	1	0	1.0	0.0	ONLY_REF_SPLICE	RASSF3^ENSG00000153179.13	chr12:64610743:+	TRMT11^ENSG00000066651.20	chr6:125995967:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2480:26241:1420	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8295	"[""INTERCHROMOSOMAL[chr12--chr6]""]"	chr12:64610743-chr6:125995967	False			0	Read count too low: 1 < 8	FAIL	1
RASSF3--NPIPB2	1	0	1.0	0.0	ONLY_REF_SPLICE	RASSF3^ENSG00000153179.13	chr12:64684894:+	NPIPB2^ENSG00000234719.9	chr16:11937668:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2487:48424:16077	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr12--chr16]""]"	chr12:64684894-chr16:11937668	False			0	Read count too low: 1 < 8	FAIL	1
RASA1--NUDT12	1	0	1.0	0.0	ONLY_REF_SPLICE	RASA1^ENSG00000145715.15	chr5:87338091:+	NUDT12^ENSG00000112874.10	chr5:103550971:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1113:8362:18039	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr5:16.16Mb]""]"	chr5:87338091-chr5:103550971	False			0	Read count too low: 1 < 8	FAIL	1
RARS2--ZWILCH	1	0	1.0	0.0	ONLY_REF_SPLICE	RARS2^ENSG00000146282.18	chr6:87529542:-	ZWILCH^ENSG00000174442.12	chr15:66535933:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:4657:5232	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr15]""]"	chr6:87529542-chr15:66535933	False			0	Read count too low: 1 < 8	FAIL	1
RAPGEF6--LYRM7	1	0	1.0	0.0	ONLY_REF_SPLICE	RAPGEF6^ENSG00000158987.22	chr5:131592383:-	LYRM7^ENSG00000186687.16	chr5:131199531:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1275:42623:14774	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9899	"[""INTRACHROMOSOMAL[chr5:0.22Mb]""]"	chr5:131592383-chr5:131199531	False			0	Read count too low: 1 < 8	FAIL	1
RAPGEF5--ZAN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAPGEF5^ENSG00000136237.19	chr7:22162397:-	ZAN^ENSG00000146839.19	chr7:100737021:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:16363:26909	.	NO_LDAS	0.0034	GT	1.4295	AG	1.9656	"[""INTRACHROMOSOMAL[chr7:78.38Mb]""]"	chr7:22162397-chr7:100737021	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
RAMP1--UBE2F	1	0	1.0	0.0	ONLY_REF_SPLICE	RAMP1^ENSG00000132329.11	chr2:237877362:+	UBE2F^ENSG00000184182.19	chr2:237973092:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:18758:1827	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8323	"[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""NEIGHBORS[54721]""]"	chr2:237877362-chr2:237973092	False			0	Read count too low: 1 < 8	FAIL	1
RALA--CREBL2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RALA^ENSG00000006451.8	chr7:39706352:+	CREBL2^ENSG00000111269.3	chr12:12637570:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:37898:23658	.	YES_LDAS	0.0034	GT	1.7056	AG	1.9656	"[""INTERCHROMOSOMAL[chr7--chr12]""]"	chr7:39706352-chr12:12637570	False			0	Read count too low: 1 < 8	FAIL	1
RAD54L--ANKRD36C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAD54L^ENSG00000085999.13	chr1:46260099:+	ANKRD36C^ENSG00000174501.14	chr2:95906822:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:17067:5456	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:46260099-chr2:95906822	False			0	Read count too low: 1 < 8	FAIL	1
RAD52--CPSF4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAD52^ENSG00000002016.18	chr12:916296:-	CPSF4^ENSG00000160917.15	chr7:99454044:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:45608:23448	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8062	"[""INTERCHROMOSOMAL[chr12--chr7]""]"	chr12:916296-chr7:99454044	False			0	Read count too low: 1 < 8	FAIL	1
RAD51--DPH5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAD51^ENSG00000051180.17	chr15:40731157:+	DPH5^ENSG00000117543.21	chr1:101001544:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:45487:21948	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:40731157-chr1:101001544	False			0	Read count too low: 1 < 8	FAIL	1
RAD18--OXTR	1	0	1.0	0.0	ONLY_REF_SPLICE	RAD18^ENSG00000070950.10	chr3:8898894:-	OXTR^ENSG00000180914.11	chr3:8753224:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2197:26411:13205	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[5774]""]"	chr3:8898894-chr3:8753224	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
RABL3--LINC02614	1	0	1.0	0.0	ONLY_REF_SPLICE	RABL3^ENSG00000144840.10	chr3:120730696:-	LINC02614^ENSG00000241288.8	chr3:125827455:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:37793:10668	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:5.08Mb]""]"	chr3:120730696-chr3:125827455	False			0	Read count too low: 1 < 8	FAIL	1
RABEPK--DNAJC8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RABEPK^ENSG00000136933.17	chr9:125232745:+	DNAJC8^ENSG00000126698.11	chr1:28220895:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2323:13281:6829	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8256	"[""INTERCHROMOSOMAL[chr9--chr1]""]"	chr9:125232745-chr1:28220895	False			0	Read count too low: 1 < 8	FAIL	1
RABEPK--AP001042.1	1	0	1.0	0.0	ONLY_REF_SPLICE	RABEPK^ENSG00000136933.17	chr9:125228059:+	AP001042.1^ENSG00000205622.11	chr21:38917400:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:42178:13163	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9086	"[""INTERCHROMOSOMAL[chr9--chr21]""]"	chr9:125228059-chr21:38917400	False			0	Read count too low: 1 < 8	FAIL	1
RAB8B--DENND4A	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB8B^ENSG00000166128.13	chr15:63189748:+	DENND4A^ENSG00000174485.16	chr15:65761438:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2124:31572:27161	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5301	"[""INTRACHROMOSOMAL[chr15:2.39Mb]""]"	chr15:63189748-chr15:65761438	False			0	Read count too low: 1 < 8	FAIL	1
RAB6B--FCHO2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAB6B^ENSG00000154917.11	chr3:133834575:-	FCHO2^ENSG00000157107.14	chr5:73087882:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1229:34072:22579	.	YES_LDAS	0.0034	GT	1.231	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chr5]""]"	chr3:133834575-chr5:73087882	False			0	Read count too low: 1 < 8	FAIL	1
RAB6B--ABRACL	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB6B^ENSG00000154917.11	chr3:133838166:-	ABRACL^ENSG00000146386.8	chr6:139042719:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:11493:2752	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr3--chr6]""]"	chr3:133838166-chr6:139042719	False			0	Read count too low: 1 < 8	FAIL	1
RAB5A--AC092747.2	1	0	0.5	0.0	ONLY_REF_SPLICE	RAB5A^ENSG00000144566.11	chr3:19951061:+	AC092747.2^ENSG00000256625.1	chr12:27139966:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1280:30189:28604	.	YES_LDAS	0.0017	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr12]""]"	chr3:19951061-chr12:27139966	False			0	Read count too low: 1 < 8	FAIL	1
RAB40B--ZDHHC11B	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB40B^ENSG00000141542.11	chr17:82698455:-	ZDHHC11B^ENSG00000206077.14	chr5:766919:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2166:10748:15923	.	YES_LDAS	0.0034	GT	1.4295	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr5]""]"	chr17:82698455-chr5:766919	False			0	Read count too low: 1 < 8	FAIL	1
RAB38--AP000676.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	RAB38^ENSG00000123892.12	chr11:88149675:-	AP000676.5^ENSG00000285835.1	chr11:87964709:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:19567:17016	.	YES_LDAS	0.0034	GT	1.6729	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.07Mb]"",""NEIGHBORS[67643]""]"	chr11:88149675-chr11:87964709	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
RAB18--RASA1	1	0	0.5	0.0	ONLY_REF_SPLICE	RAB18^ENSG00000099246.17	chr10:27509930:+	RASA1^ENSG00000145715.15	chr5:87331348:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:48901:19062	.	NO_LDAS	0.0017	GT	1.9219	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr5]""]"	chr10:27509930-chr5:87331348	False			0	Read count too low: 1 < 8	FAIL	1
RAB18--MRPS10	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB18^ENSG00000099246.17	chr10:27509930:+	MRPS10^ENSG00000048544.6	chr6:42214344:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:41507:23882	.	YES_LDAS	0.0034	GT	1.9219	AG	1.5219	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:27509930-chr6:42214344	False			0	Read count too low: 1 < 8	FAIL	1
RAB18--LINC02680	1	0	1.0	0.0	ONLY_REF_SPLICE	RAB18^ENSG00000099246.17	chr10:27509930:+	LINC02680^ENSG00000285737.1	chr10:27578371:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1420:29048:3592	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9329	"[""INTRACHROMOSOMAL[chr10:0.02Mb]"",""NEIGHBORS[22191]""]"	chr10:27509930-chr10:27578371	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
QTRT1--KCNC1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	QTRT1^ENSG00000213339.9	chr19:10707382:+	KCNC1^ENSG00000129159.9	chr11:17736453:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1256:23927:22383	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr19--chr11]""]"	chr19:10707382-chr11:17736453	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PXYLP1--GK5	1	0	1.0	0.0	ONLY_REF_SPLICE	PXYLP1^ENSG00000155893.13	chr3:141262340:+	GK5^ENSG00000175066.16	chr3:142204788:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2270:4624:25690	.	YES_LDAS	0.0034	GT	1.9086	AG	1.5546	"[""INTRACHROMOSOMAL[chr3:0.79Mb]""]"	chr3:141262340-chr3:142204788	False			0	Read count too low: 1 < 8	FAIL	1
PXMP2--AACS	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PXMP2^ENSG00000176894.10	chr12:132701369:+	AACS^ENSG00000081760.17	chr12:125135791:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2396:41094:28296	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr12:7.54Mb]""]"	chr12:132701369-chr12:125135791	False			0	Read count too low: 1 < 8	FAIL	1
PXK--KAT2B	1	0	1.0	0.0	ONLY_REF_SPLICE	PXK^ENSG00000168297.16	chr3:58412963:+	KAT2B^ENSG00000114166.8	chr3:20152332:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:12908:28156	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8295	"[""INTRACHROMOSOMAL[chr3:38.18Mb]""]"	chr3:58412963-chr3:20152332	False			0	Read count too low: 1 < 8	FAIL	1
PUSL1--SLC35E2A	1	0	0.5	0.0	ONLY_REF_SPLICE	PUSL1^ENSG00000169972.12	chr1:1308720:+	SLC35E2A^ENSG00000215790.8	chr1:1739704:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:41499:3186	.	YES_LDAS	0.0017	GT	1.9899	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:0.41Mb]""]"	chr1:1308720-chr1:1739704	False			0	Read count too low: 1 < 8	FAIL	1
PUS7--CHMP4A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PUS7^ENSG00000091127.14	chr7:105470688:-	CHMP4A^ENSG00000254505.11	chr14:24211491:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:29169:7137	.	YES_LDAS	0.0034	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr14]""]"	chr7:105470688-chr14:24211491	False			0	Read count too low: 1 < 8	FAIL	1
PTTG1--TMPO	1	0	1.0	0.0	ONLY_REF_SPLICE	PTTG1^ENSG00000164611.13	chr5:160422403:+	TMPO^ENSG00000120802.14	chr12:98537475:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2208:33133:1560	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr5--chr12]""]"	chr5:160422403-chr12:98537475	False			0	Read count too low: 1 < 8	FAIL	1
PTS--NQO2	1	0	1.0	0.0	ONLY_REF_SPLICE	PTS^ENSG00000150787.8	chr11:112226526:+	NQO2^ENSG00000124588.22	chr6:3006468:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:8200:28044	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:112226526-chr6:3006468	False			0	Read count too low: 1 < 8	FAIL	1
PTPRN2--PTPRN	1	0	1.0	0.0	ONLY_REF_SPLICE	PTPRN2^ENSG00000155093.19	chr7:157568902:-	PTPRN^ENSG00000054356.14	chr2:219296345:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2407:8540:8342	.	NO_LDAS	0.0034	GT	1.7465	AG	1.6729	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:157568902-chr2:219296345	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
PTPN9--SNUPN	1	0	1.0	0.0	ONLY_REF_SPLICE	PTPN9^ENSG00000169410.10	chr15:75517259:-	SNUPN^ENSG00000169371.14	chr15:75621056:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1217:11355:15124	.	YES_LDAS	0.0034	GT	1.9656	AG	1.4295	"[""INTRACHROMOSOMAL[chr15:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[18768]""]"	chr15:75517259-chr15:75621056	False			0	Read count too low: 1 < 8	FAIL	1
PTK6--RNF121	1	0	1.0	0.0	ONLY_REF_SPLICE	PTK6^ENSG00000101213.7	chr20:63533551:-	RNF121^ENSG00000137522.18	chr11:71994719:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2347:10805:12854	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9899	"[""INTERCHROMOSOMAL[chr20--chr11]""]"	chr20:63533551-chr11:71994719	False			0	Read count too low: 1 < 8	FAIL	1
PTGR2--FOXN2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PTGR2^ENSG00000140043.11	chr14:73879305:+	FOXN2^ENSG00000170802.16	chr2:48378856:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2246:5288:17338	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr2]""]"	chr14:73879305-chr2:48378856	False			0	Read count too low: 1 < 8	FAIL	1
PTAR1--OR51G2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PTAR1^ENSG00000188647.13	chr9:69759853:-	OR51G2^ENSG00000176893.5	chr11:4915098:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1238:31240:20393	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:69759853-chr11:4915098	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PSTPIP2--ITPKB	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PSTPIP2^ENSG00000152229.18	chr18:45991902:-	ITPKB^ENSG00000143772.9	chr1:226631838:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:3136:9211	.	NO_LDAS	0.0034	GT	1.9899	AG	1.4566	"[""INTERCHROMOSOMAL[chr18--chr1]""]"	chr18:45991902-chr1:226631838	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PSTK--LINC-PINT	1	0	1.0	0.0	ONLY_REF_SPLICE	PSTK^ENSG00000179988.15	chr10:122983470:+	LINC-PINT^ENSG00000231721.7	chr7:130945835:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1149:5838:15853	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5329	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:122983470-chr7:130945835	False			0	Read count too low: 1 < 8	FAIL	1
PSORS1C1--DGKH	1	0	1.0	0.0	ONLY_REF_SPLICE	PSORS1C1^ENSG00000204540.11	chr6:31114891:+	DGKH^ENSG00000102780.17	chr13:42129552:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1372:40706:25045	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr6--chr13]""]"	chr6:31114891-chr13:42129552	False			0	Read count too low: 1 < 8	FAIL	1
PSMD7--PM20D2	1	0	1.0	0.0	ONLY_REF_SPLICE	PSMD7^ENSG00000103035.11	chr16:74301652:+	PM20D2^ENSG00000146281.6	chr6:89149265:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:24210:11439	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTERCHROMOSOMAL[chr16--chr6]""]"	chr16:74301652-chr6:89149265	False			0	Read count too low: 1 < 8	FAIL	1
PSMD12--AC103764.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PSMD12^ENSG00000197170.10	chr17:67366412:-	AC103764.1^ENSG00000251218.1	chr8:134851563:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:12480:21388	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7232	"[""INTERCHROMOSOMAL[chr17--chr8]""]"	chr17:67366412-chr8:134851563	False			0	Read count too low: 1 < 8	FAIL	1
PSMC1--KREMEN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PSMC1^ENSG00000100764.14	chr14:90259193:+	KREMEN1^ENSG00000183762.13	chr22:29144956:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1435:42841:5176	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr22]""]"	chr14:90259193-chr22:29144956	False			0	Read count too low: 1 < 8	FAIL	1
PSEN2--ABCB10	1	0	1.0	0.0	ONLY_REF_SPLICE	PSEN2^ENSG00000143801.18	chr1:226889049:+	ABCB10^ENSG00000135776.5	chr1:229531731:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1352:19550:22257	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7465	"[""INTRACHROMOSOMAL[chr1:2.59Mb]""]"	chr1:226889049-chr1:229531731	False			0	Read count too low: 1 < 8	FAIL	1
PRR5--HECW2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRR5^ENSG00000186654.21	chr22:44726634:+	HECW2^ENSG00000138411.13	chr2:196240494:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:34282:1869	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr22--chr2]""]"	chr22:44726634-chr2:196240494	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PRR14--HYAL2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRR14^ENSG00000156858.12	chr16:30656180:+	HYAL2^ENSG00000068001.14	chr3:50319942:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:6445:12476	.	YES_LDAS	0.0034	GC	1.6402	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr3]""]"	chr16:30656180-chr3:50319942	False			0	Read count too low: 1 < 8	FAIL	1
PRPF4--OTULINL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRPF4^ENSG00000136875.13	chr9:113282711:+	OTULINL^ENSG00000145569.6	chr5:14581799:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2450:37106:12616	.	NO_LDAS	0.0034	GT	1.3996	AG	1.4566	"[""INTERCHROMOSOMAL[chr9--chr5]""]"	chr9:113282711-chr5:14581799	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PRPF39--MAP4K5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRPF39^ENSG00000185246.18	chr14:45114950:+	MAP4K5^ENSG00000012983.11	chr14:50468771:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1364:36434:28240	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""INTRACHROMOSOMAL[chr14:5.30Mb]""]"	chr14:45114950-chr14:50468771	False			0	Read count too low: 1 < 8	FAIL	1
PRPF38A--KDM4E	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRPF38A^ENSG00000134748.13	chr1:52412624:+	KDM4E^ENSG00000235268.2	chr11:95026625:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1275:39306:13429	.	NO_LDAS	0.0034	GT	1.2729	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:52412624-chr11:95026625	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PRKAR1B--ZNF18	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRKAR1B^ENSG00000188191.15	chr7:727590:-	ZNF18^ENSG00000154957.14	chr17:11992517:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1318:27875:11846	.	YES_LDAS	0.0034	GT	1.5656	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr17]""]"	chr7:727590-chr17:11992517	False			0	Read count too low: 1 < 8	FAIL	1
PRKACB--KCNQ4	1	0	1.0	0.0	ONLY_REF_SPLICE	PRKACB^ENSG00000142875.19	chr1:84078371:+	KCNQ4^ENSG00000117013.17	chr1:40817265:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1205:12811:23195	.	YES_LDAS	0.0034	GT	1.5546	AG	1.5546	"[""INTRACHROMOSOMAL[chr1:43.24Mb]""]"	chr1:84078371-chr1:40817265	False			0	Read count too low: 1 < 8	FAIL	1
PRKAA1--AC113385.3	1	0	0.07	0.0	ONLY_REF_SPLICE	PRKAA1^ENSG00000132356.11	chr5:40798063:-	AC113385.3^ENSG00000275374.1	chr5:100381398:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:39209:17268	.	YES_LDAS	0.0002	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr5:59.58Mb]""]"	chr5:40798063-chr5:100381398	False			0	Read count too low: 1 < 8	FAIL	1
PRIM2--CMTM3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRIM2^ENSG00000146143.19	chr6:57318480:+	CMTM3^ENSG00000140931.20	chr16:66609883:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2474:3168:7754	.	YES_LDAS	0.0034	GT	1.6402	AG	1.3383	"[""INTERCHROMOSOMAL[chr6--chr16]""]"	chr6:57318480-chr16:66609883	False			0	Read count too low: 1 < 8	FAIL	1
PRH1--ITPR2	1	0	1.0	0.0	ONLY_REF_SPLICE	PRH1^ENSG00000231887.7	chr12:10973655:-	ITPR2^ENSG00000123104.12	chr12:26387594:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:36159:25998	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTRACHROMOSOMAL[chr12:15.16Mb]""]"	chr12:10973655-chr12:26387594	False			0	Read count too low: 1 < 8	FAIL	1
PRH1--ERGIC2	1	0	1.0	0.0	ONLY_REF_SPLICE	PRH1^ENSG00000231887.7	chr12:11171422:-	ERGIC2^ENSG00000087502.18	chr12:29371670:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2428:35973:23770	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTRACHROMOSOMAL[chr12:18.17Mb]""]"	chr12:11171422-chr12:29371670	False			0	Read count too low: 1 < 8	FAIL	1
PRELID3A--COG7	1	0	1.0	0.0	ONLY_REF_SPLICE	PRELID3A^ENSG00000141391.14	chr18:12422341:+	COG7^ENSG00000168434.13	chr16:23434718:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1204:43772:14998	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr18--chr16]""]"	chr18:12422341-chr16:23434718	False			0	Read count too low: 1 < 8	FAIL	1
PRDX6-AS1--TNFSF4	1	0	1.0	0.0	ONLY_REF_SPLICE	PRDX6-AS1^ENSG00000203739.4	chr1:173460378:-	TNFSF4^ENSG00000117586.11	chr1:173188569:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:46361:4153	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.21Mb]""]"	chr1:173460378-chr1:173188569	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
PRDX6-AS1--TNFSF4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRDX6-AS1^ENSG00000203739.4	chr1:173476632:-	TNFSF4^ENSG00000117586.11	chr1:173207185:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:39783:7726	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5656	"[""INTRACHROMOSOMAL[chr1:0.21Mb]""]"	chr1:173476632-chr1:173207185	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
PRDM5--STXBP5L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PRDM5^ENSG00000138738.11	chr4:120818349:-	STXBP5L^ENSG00000145087.13	chr3:121422522:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2389:38756:8721	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7056	"[""INTERCHROMOSOMAL[chr4--chr3]""]"	chr4:120818349-chr3:121422522	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PRCP--AASDHPPT	1	0	1.0	0.0	ONLY_REF_SPLICE	PRCP^ENSG00000137509.12	chr11:82900235:-	AASDHPPT^ENSG00000149313.11	chr11:106079467:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2420:17528:16596	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chr11:23.10Mb]""]"	chr11:82900235-chr11:106079467	False			0	Read count too low: 1 < 8	FAIL	1
PPWD1--PLCB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PPWD1^ENSG00000113593.12	chr5:65563421:+	PLCB1^ENSG00000182621.18	chr20:8628361:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1258:1793:9351	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chr20]""]"	chr5:65563421-chr20:8628361	False			0	Read count too low: 1 < 8	FAIL	1
PPT2--AL031595.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PPT2^ENSG00000221988.13	chr6:32157924:+	AL031595.3^ENSG00000280434.1	chr22:44151887:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:43367:10682	.	NO_LDAS	0.0034	GT	1.8892	AG	1.4566	"[""INTERCHROMOSOMAL[chr6--chr22]""]"	chr6:32157924-chr22:44151887	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PPP1R7--SLC44A4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PPP1R7^ENSG00000115685.15	chr2:241182717:+	SLC44A4^ENSG00000204385.13	chr6:31863742:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2248:8443:4531	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:241182717-chr6:31863742	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PPP1R14C--TSC22D4	1	0	0.33	0.0	INCL_NON_REF_SPLICE	PPP1R14C^ENSG00000198729.5	chr6:150143405:+	TSC22D4^ENSG00000166925.9	chr7:100478281:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2309:51182:10542	.	NO_LDAS	0.0011	GT	1.5301	AG	1.5656	"[""INTERCHROMOSOMAL[chr6--chr7]""]"	chr6:150143405-chr7:100478281	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PPM1L--NMD3	1	0	1.0	0.0	ONLY_REF_SPLICE	PPM1L^ENSG00000163590.14	chr3:160961910:+	NMD3^ENSG00000169251.13	chr3:161156971:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:45730:11495	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:0.03Mb]"",""NEIGHBORS[25794]""]"	chr3:160961910-chr3:161156971	False			0	Read count too low: 1 < 8	FAIL	1
PPIP5K1--CATSPER2P1	1	0	1.0	0.0	ONLY_REF_SPLICE	PPIP5K1^ENSG00000168781.22	chr15:43564867:-	CATSPER2P1^ENSG00000205771.6	chr15:43745170:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1422:6339:5204	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:0.14Mb]""]"	chr15:43564867-chr15:43745170	False			0	Read count too low: 1 < 8	FAIL	1
PPIH--DESI1	1	0	1.0	0.0	ONLY_REF_SPLICE	PPIH^ENSG00000171960.12	chr1:42663543:+	DESI1^ENSG00000100418.8	chr22:41604153:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:31289:15937	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr22]""]"	chr1:42663543-chr22:41604153	False			0	Read count too low: 1 < 8	FAIL	1
PPHLN1--MLH3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PPHLN1^ENSG00000134283.18	chr12:42393689:+	MLH3^ENSG00000119684.16	chr14:75046589:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:46830:17072	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr14]""]"	chr12:42393689-chr14:75046589	False			0	Read count too low: 1 < 8	FAIL	1
PPARD--PCCA	1	0	1.0	0.0	ONLY_REF_SPLICE	PPARD^ENSG00000112033.14	chr6:35347150:+	PCCA^ENSG00000175198.17	chr13:100330561:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2498:19356:8160	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8323	"[""INTERCHROMOSOMAL[chr6--chr13]""]"	chr6:35347150-chr13:100330561	False			0	Read count too low: 1 < 8	FAIL	1
POLR3G--UPF3A	1	0	0.5	0.0	ONLY_REF_SPLICE	POLR3G^ENSG00000113356.13	chr5:90506674:+	UPF3A^ENSG00000169062.15	chr13:114298840:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:6056:15811	.	YES_LDAS	0.0017	GT	1.2729	AG	1.8062	"[""INTERCHROMOSOMAL[chr5--chr13]""]"	chr5:90506674-chr13:114298840	False			0	Read count too low: 1 < 8	FAIL	1
POLE4--AC007681.1	1	0	1.0	0.0	ONLY_REF_SPLICE	POLE4^ENSG00000115350.12	chr2:74960146:+	AC007681.1^ENSG00000270571.2	chr2:75186830:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2183:47728:4055	.	YES_LDAS	0.0034	GT	1.7968	AG	1.6402	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.18Mb]""]"	chr2:74960146-chr2:75186830	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
POLD3--RNF169	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POLD3^ENSG00000077514.9	chr11:74640841:+	RNF169^ENSG00000166439.6	chr11:74789626:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1436:5409:4069	.	YES_LDAS	0.0034	GT	1.5219	AG	1.8323	"[""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.08Mb]"",""NEIGHBORS[79732]""]"	chr11:74640841-chr11:74789626	False			0	Read count too low: 1 < 8	FAIL	1
POLA1--NDUFV2	1	0	1.0	0.0	ONLY_REF_SPLICE	POLA1^ENSG00000101868.13	chrX:24699549:+	NDUFV2^ENSG00000178127.13	chr18:9126831:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:4721:13499	.	NO_LDAS	0.0034	GT	1.3383	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr18]""]"	chrX:24699549-chr18:9126831	False			0	Read count too low: 1 < 8	FAIL	1
POGLUT3--NPIPB10P	1	0	0.08	0.0	ONLY_REF_SPLICE	POGLUT3^ENSG00000178202.13	chr11:108478024:-	NPIPB10P^ENSG00000196796.5	chr16:29050502:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2463:47186:22313	.	NO_LDAS	0.0003	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr16]""]"	chr11:108478024-chr16:29050502	False			0	Read count too low: 1 < 8	FAIL	1
POGK--TXNRD3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POGK^ENSG00000143157.12	chr1:166850268:+	TXNRD3^ENSG00000197763.20	chr3:126646207:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1225:40795:5302	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:166850268-chr3:126646207	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
POFUT1--IFFO1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	POFUT1^ENSG00000101346.14	chr20:32234577:+	IFFO1^ENSG00000010295.20	chr12:6555287:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:18248:9239	.	NO_LDAS	0.0034	GT	1.5628	AG	1.5546	"[""INTERCHROMOSOMAL[chr20--chr12]""]"	chr20:32234577-chr12:6555287	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PMS2P12--AC004980.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PMS2P12^ENSG00000228546.2	chr7:102339115:+	AC004980.4^ENSG00000250778.1	chr7:76521943:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1474:29032:6086	.	YES_LDAS	0.0034	GT	1.4566	AG	1.9086	"[""INTRACHROMOSOMAL[chr7:25.82Mb]""]"	chr7:102339115-chr7:76521943	False			0	Read count too low: 1 < 8	FAIL	1
PLGLA--AC083899.1	1	0	0.25	0.0	ONLY_REF_SPLICE	PLGLA^ENSG00000240935.6	chr2:106391020:+	AC083899.1^ENSG00000204745.4	chr2:87138256:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:29525:15545	.	NO_LDAS	0.0008	GT	1.8295	AG	1.8295	"[""INTRACHROMOSOMAL[chr2:19.19Mb]""]"	chr2:106391020-chr2:87138256	False			0	Read count too low: 1 < 8	FAIL	1
PLEKHN1--EMSY	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PLEKHN1^ENSG00000187583.11	chr1:973256:+	EMSY^ENSG00000158636.16	chr11:76496361:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1335:39096:6983	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:973256-chr11:76496361	False			0	Read count too low: 1 < 8	FAIL	1
PLEK2--MRPS21	1	0	1.0	0.0	ONLY_REF_SPLICE	PLEK2^ENSG00000100558.9	chr14:67412018:-	MRPS21^ENSG00000266472.6	chr1:150308048:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1110:17957:22943	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr1]""]"	chr14:67412018-chr1:150308048	False			0	Read count too low: 1 < 8	FAIL	1
PLCL2--GRM7	1	0	1.0	0.0	ONLY_REF_SPLICE	PLCL2^ENSG00000154822.18	chr3:16885366:+	GRM7^ENSG00000196277.16	chr3:7146452:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1176:17787:27693	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:9.06Mb]""]"	chr3:16885366-chr3:7146452	False			0	Read count too low: 1 < 8	FAIL	1
PLCB1--PLCB4	1	0	1.0	0.0	ONLY_REF_SPLICE	PLCB1^ENSG00000182621.18	chr20:8790261:+	PLCB4^ENSG00000101333.18	chr20:9468571:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:16719:17324	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5329	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr20:0.10Mb]""]"	chr20:8790261-chr20:9468571	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
PLA2G12A--NECAB3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PLA2G12A^ENSG00000123739.11	chr4:109712956:-	NECAB3^ENSG00000125967.17	chr20:33674386:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:21152:15419	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5301	"[""INTERCHROMOSOMAL[chr4--chr20]""]"	chr4:109712956-chr20:33674386	False			0	Read count too low: 1 < 8	FAIL	1
PKIB--SERINC1	1	0	1.0	0.0	ONLY_REF_SPLICE	PKIB^ENSG00000135549.15	chr6:122610535:+	SERINC1^ENSG00000111897.7	chr6:122458681:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:13944:17591	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8295	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""LOCAL_INVERSION:+:-:[127]""]"	chr6:122610535-chr6:122458681	False			0	Read count too low: 1 < 8	FAIL	1
PKD1P6--AP000944.2	1	0	0.14	0.0	INCL_NON_REF_SPLICE	PKD1P6^ENSG00000250251.6	chr16:15137754:-	AP000944.2^ENSG00000277599.1	chr11:65423963:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1229:49419:4657	.	NO_LDAS	0.0005	GT	1.7968	AG	1.9329	"[""INTERCHROMOSOMAL[chr16--chr11]""]"	chr16:15137754-chr11:65423963	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PIR--OFD1	1	0	1.0	0.0	ONLY_REF_SPLICE	PIR^ENSG00000087842.11	chrX:15491162:-	OFD1^ENSG00000046651.15	chrX:13735248:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:14073:26026	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTRACHROMOSOMAL[chrX:1.62Mb]""]"	chrX:15491162-chrX:13735248	False			0	Read count too low: 1 < 8	FAIL	1
PIP4P2--NDUFAF6	1	0	1.0	0.0	ONLY_REF_SPLICE	PIP4P2^ENSG00000155099.8	chr8:91008743:-	NDUFAF6^ENSG00000156170.13	chr8:95031995:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:37745:15517	.	YES_LDAS	0.0034	GT	1.5546	AG	1.7819	"[""INTRACHROMOSOMAL[chr8:3.85Mb]""]"	chr8:91008743-chr8:95031995	False			0	Read count too low: 1 < 8	FAIL	1
PIP4K2A--PARG	1	0	0.5	0.0	ONLY_REF_SPLICE	PIP4K2A^ENSG00000150867.14	chr10:22714183:-	PARG^ENSG00000227345.9	chr10:49879830:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2188:5417:25970	.	YES_LDAS	0.0017	GT	1.9329	AG	1.7465	"[""INTRACHROMOSOMAL[chr10:27.10Mb]""]"	chr10:22714183-chr10:49879830	False			0	Read count too low: 1 < 8	FAIL	1
PINX1--RP1L1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PINX1^ENSG00000254093.9	chr8:10820193:-	RP1L1^ENSG00000183638.6	chr8:10678251:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1340:17018:20393	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[52774]""]"	chr8:10820193-chr8:10678251	False			0	Read count too low: 1 < 8	FAIL	1
PIGZ--ANKIB1	1	0	1.0	0.0	ONLY_REF_SPLICE	PIGZ^ENSG00000119227.8	chr3:196951821:-	ANKIB1^ENSG00000001629.10	chr7:92294889:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2101:11363:22985	.	YES_LDAS	0.0034	GT	1.8295	AG	1.5656	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:196951821-chr7:92294889	False			0	Read count too low: 1 < 8	FAIL	1
PIGF--CFAP70	1	0	1.0	0.0	ONLY_REF_SPLICE	PIGF^ENSG00000151665.13	chr2:46592475:-	CFAP70^ENSG00000156042.18	chr10:73299101:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1168:2796:28716	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr2--chr10]""]"	chr2:46592475-chr10:73299101	False			0	Read count too low: 1 < 8	FAIL	1
PIBF1--DTWD1	1	0	1.0	0.0	ONLY_REF_SPLICE	PIBF1^ENSG00000083535.16	chr13:72965404:+	DTWD1^ENSG00000104047.15	chr15:49634536:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1164:47922:16526	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7232	"[""INTERCHROMOSOMAL[chr13--chr15]""]"	chr13:72965404-chr15:49634536	False			0	Read count too low: 1 < 8	FAIL	1
PHKA2--PDHA1	1	0	1.0	0.0	ONLY_REF_SPLICE	PHKA2^ENSG00000044446.12	chrX:18943710:-	PDHA1^ENSG00000131828.14	chrX:19349312:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:2286:7292	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTRACHROMOSOMAL[chrX:0.36Mb]""]"	chrX:18943710-chrX:19349312	False			0	Read count too low: 1 < 8	FAIL	1
PGM5--GSDMB	1	0	1.0	0.0	ONLY_REF_SPLICE	PGM5^ENSG00000154330.13	chr9:68479553:+	GSDMB^ENSG00000073605.18	chr17:39909924:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1136:37065:20729	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5628	"[""INTERCHROMOSOMAL[chr9--chr17]""]"	chr9:68479553-chr17:39909924	False			0	Read count too low: 1 < 8	FAIL	1
PGLS--GAPDHP72	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PGLS^ENSG00000130313.7	chr19:17511960:+	GAPDHP72^ENSG00000216624.3	chr6:166064249:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2286:39686:12518	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr19--chr6]""]"	chr19:17511960-chr6:166064249	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PFDN4--RUNDC1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PFDN4^ENSG00000101132.10	chr20:54208167:+	RUNDC1^ENSG00000198863.7	chr17:42991543:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:19923:16063	.	YES_LDAS	0.0034	AT	1.2729	AC	1.8892	"[""INTERCHROMOSOMAL[chr20--chr17]""]"	chr20:54208167-chr17:42991543	False			0	Read count too low: 1 < 8	FAIL	1
PEG10--COPS7A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PEG10^ENSG00000242265.6	chr7:94664123:+	COPS7A^ENSG00000111652.10	chr12:6729358:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1402:4851:6241	.	YES_LDAS	0.0034	AT	1.9086	AC	1.5656	"[""INTERCHROMOSOMAL[chr7--chr12]""]"	chr7:94664123-chr12:6729358	False			0	Read count too low: 1 < 8	FAIL	1
PDXP--STXBP3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PDXP^ENSG00000241360.2	chr22:37665796:+	STXBP3^ENSG00000116266.11	chr1:108807436:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:8305:10598	.	YES_LDAS	0.0034	GC	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr22--chr1]""]"	chr22:37665796-chr1:108807436	False			0	Read count too low: 1 < 8	FAIL	1
PDSS2--SNX3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PDSS2^ENSG00000164494.12	chr6:107459133:-	SNX3^ENSG00000112335.15	chr6:108223045:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1281:45285:12070	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5656	"[""INTRACHROMOSOMAL[chr6:0.75Mb]""]"	chr6:107459133-chr6:108223045	False			0	Read count too low: 1 < 8	FAIL	1
PDHA1--ERLEC1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PDHA1^ENSG00000131828.14	chrX:19350081:+	ERLEC1^ENSG00000068912.14	chr2:53794373:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:49095:20827	.	YES_LDAS	0.0034	GT	1.6402	AG	1.7056	"[""INTERCHROMOSOMAL[chrX--chr2]""]"	chrX:19350081-chr2:53794373	False			0	Read count too low: 1 < 8	FAIL	1
PDGFA--PRKAR1B	1	0	1.0	0.0	ONLY_REF_SPLICE	PDGFA^ENSG00000197461.13	chr7:518939:-	PRKAR1B^ENSG00000188191.15	chr7:711527:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2427:15845:4545	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5656	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[28901]""]"	chr7:518939-chr7:711527	False			0	Read count too low: 1 < 8	FAIL	1
PDE5A--ARHGAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PDE5A^ENSG00000138735.16	chr4:119516961:-	ARHGAP1^ENSG00000175220.12	chr11:46677675:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:24429:12826	.	YES_LDAS	0.0034	AT	1.9899	AC	1.7465	"[""INTERCHROMOSOMAL[chr4--chr11]""]"	chr4:119516961-chr11:46677675	False			0	Read count too low: 1 < 8	FAIL	1
PDCD4--COX17	1	0	0.5	0.0	INCL_NON_REF_SPLICE	PDCD4^ENSG00000150593.18	chr10:110875989:+	COX17^ENSG00000138495.7	chr3:119675233:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1178:6064:15461	.	YES_LDAS	0.0017	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:110875989-chr3:119675233	False			0	Read count too low: 1 < 8	FAIL	1
PDCD2L--FRG1CP	1	0	0.5	0.0	ONLY_REF_SPLICE	PDCD2L^ENSG00000126249.8	chr19:34413847:+	FRG1CP^ENSG00000282826.2	chr20:28591519:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2313:42469:9576	.	YES_LDAS	0.0017	GT	1.8062	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr20]""]"	chr19:34413847-chr20:28591519	False			0	Read count too low: 1 < 8	FAIL	1
PDC-AS1--ODR4	1	0	1.0	0.0	ONLY_REF_SPLICE	PDC-AS1^ENSG00000229739.4	chr1:186436573:+	ODR4^ENSG00000157181.16	chr1:186406083:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1217:8742:20883	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7465	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2103]""]"	chr1:186436573-chr1:186406083	False			0	Read count too low: 1 < 8	FAIL	1
PCSK4--GHRL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCSK4^ENSG00000115257.15	chr19:1483939:-	GHRL^ENSG00000157017.16	chr3:10289823:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2425:7957:23644	.	NO_LDAS	0.0034	GT	1.053	AG	1.4295	"[""INTERCHROMOSOMAL[chr19--chr3]""]"	chr19:1483939-chr3:10289823	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PCNP--EDRF1-DT	1	0	1.0	0.0	ONLY_REF_SPLICE	PCNP^ENSG00000081154.12	chr3:101574279:+	EDRF1-DT^ENSG00000224023.10	chr10:125709567:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:24615:6283	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr10]""]"	chr3:101574279-chr10:125709567	False			0	Read count too low: 1 < 8	FAIL	1
PCLO--AC016065.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCLO^ENSG00000186472.20	chr7:83134250:-	AC016065.1^ENSG00000246089.3	chr8:6404527:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2355:47695:15741	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:83134250-chr8:6404527	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PCDHGB2--ADGRV1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCDHGB2^ENSG00000253910.2	chr5:141362556:+	ADGRV1^ENSG00000164199.18	chr5:90720935:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:29226:21444	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTRACHROMOSOMAL[chr5:50.20Mb]""]"	chr5:141362556-chr5:90720935	False			0	Read count too low: 1 < 8	FAIL	1
PCDHGB1--PCDHGA10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCDHGB1^ENSG00000254221.2	chr5:141352669:+	PCDHGA10^ENSG00000253846.2	chr5:141494807:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1473:6938:19440	.	NO_LDAS	0.0034	GT	1.6895	AG	1.3383	"[""DGD_PARALOGS"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr5:0.06Mb]"",""NEIGHBORS[60294]""]"	chr5:141352669-chr5:141494807	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
PCDH7--LINC02497	1	0	1.0	0.0	ONLY_REF_SPLICE	PCDH7^ENSG00000169851.15	chr4:30920369:+	LINC02497^ENSG00000251182.2	chr4:31176621:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1149:45641:2261	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7819	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr4:0.02Mb]"",""NEIGHBORS[24208]""]"	chr4:30920369-chr4:31176621	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
PCCA--CLYBL	1	0	1.0	0.0	ONLY_REF_SPLICE	PCCA^ENSG00000175198.17	chr13:100157340:+	CLYBL^ENSG00000125246.15	chr13:99858861:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:18272:4741	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""YOSHIHARA_TCGA"",""Klijn_CellLines"",""GUO2018CR_TCGA"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr13:0.19Mb]""]"	chr13:100157340-chr13:99858861	False			0	Read count too low: 1 < 8	FAIL	1
PCBP4--C19orf48	1	0	1.0	0.0	ONLY_REF_SPLICE	PCBP4^ENSG00000090097.22	chr3:51958790:-	C19orf48^ENSG00000167747.15	chr19:50802257:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1209:27875:5204	.	NO_LDAS	0.0034	GT	1.7968	AG	1.9899	"[""INTERCHROMOSOMAL[chr3--chr19]""]"	chr3:51958790-chr19:50802257	False			0	Read count too low: 1 < 8	FAIL	1
PCAT1--LGALS8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PCAT1^ENSG00000253438.4	chr8:126557266:+	LGALS8^ENSG00000116977.19	chr1:236541696:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1221:46021:22593	.	YES_LDAS	0.0034	GT	1.6402	AG	1.371	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:126557266-chr1:236541696	False			0	Read count too low: 1 < 8	FAIL	1
PC--FMNL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PC^ENSG00000173599.15	chr11:66871052:-	FMNL1^ENSG00000184922.14	chr17:45241493:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2402:37996:26657	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5329	"[""INTERCHROMOSOMAL[chr11--chr17]""]"	chr11:66871052-chr17:45241493	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PBX3--MB	1	0	1.0	0.0	ONLY_REF_SPLICE	PBX3^ENSG00000167081.18	chr9:125778103:+	MB^ENSG00000198125.13	chr22:35617265:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1292:50543:24989	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""INTERCHROMOSOMAL[chr9--chr22]""]"	chr9:125778103-chr22:35617265	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
PARP8--RASA1	1	0	1.0	0.0	ONLY_REF_SPLICE	PARP8^ENSG00000151883.19	chr5:50668125:+	RASA1^ENSG00000145715.15	chr5:87331348:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2142:17512:12476	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr5:36.42Mb]""]"	chr5:50668125-chr5:87331348	False			0	Read count too low: 1 < 8	FAIL	1
PARN--THUMPD1	1	0	0.5	0.0	ONLY_REF_SPLICE	PARN^ENSG00000140694.17	chr16:14599904:-	THUMPD1^ENSG00000066654.14	chr16:20739071:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1173:27899:10514	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:6.07Mb]""]"	chr16:14599904-chr16:20739071	False			0	Read count too low: 1 < 8	FAIL	1
PARN--RNF38	1	0	1.0	0.0	ONLY_REF_SPLICE	PARN^ENSG00000140694.17	chr16:14578531:-	RNF38^ENSG00000137075.18	chr9:36376127:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2373:22786:7067	.	NO_LDAS	0.0034	GC	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr9]""]"	chr16:14578531-chr9:36376127	False			0	Read count too low: 1 < 8	FAIL	1
PARM1--PAK1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PARM1^ENSG00000169116.11	chr4:74933370:+	PAK1^ENSG00000149269.10	chr11:77397045:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1188:40965:18684	.	NO_LDAS	0.0034	GT	1.9899	AG	1.7465	"[""INTERCHROMOSOMAL[chr4--chr11]""]"	chr4:74933370-chr11:77397045	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PARG--TIMM23	1	0	1.0	0.0	ONLY_REF_SPLICE	PARG^ENSG00000227345.9	chr10:49941509:-	TIMM23^ENSG00000265354.4	chr10:45975454:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:37324:4111	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTRACHROMOSOMAL[chr10:3.81Mb]""]"	chr10:49941509-chr10:45975454	False			0	Read count too low: 1 < 8	FAIL	1
PARD6G--ZCCHC2	1	0	1.0	0.0	ONLY_REF_SPLICE	PARD6G^ENSG00000178184.16	chr18:80202710:-	ZCCHC2^ENSG00000141664.10	chr18:62539681:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1143:21112:1168	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr18:17.57Mb]""]"	chr18:80202710-chr18:62539681	False			0	Read count too low: 1 < 8	FAIL	1
PARD6G--FHOD3	1	0	1.0	0.0	ONLY_REF_SPLICE	PARD6G^ENSG00000178184.16	chr18:80202710:-	FHOD3^ENSG00000134775.15	chr18:36576451:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2122:12221:25255	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr18:43.38Mb]""]"	chr18:80202710-chr18:36576451	False			0	Read count too low: 1 < 8	FAIL	1
PAQR3--PAOX	1	0	1.0	0.0	ONLY_REF_SPLICE	PAQR3^ENSG00000163291.14	chr4:78939040:-	PAOX^ENSG00000148832.16	chr10:133388956:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1341:9664:9562	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7819	"[""INTERCHROMOSOMAL[chr4--chr10]""]"	chr4:78939040-chr10:133388956	False			0	Read count too low: 1 < 8	FAIL	1
PAPOLG--AC026124.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PAPOLG^ENSG00000115421.13	chr2:60782774:+	AC026124.1^ENSG00000250280.2	chr12:65285963:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:3767:7081	.	NO_LDAS	0.0034	GT	1.8295	AG	1.5058	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:60782774-chr12:65285963	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PAM16--TXNL4A	1	0	1.0	0.0	ONLY_REF_SPLICE	PAM16^ENSG00000217930.8	chr16:4351232:-	TXNL4A^ENSG00000141759.15	chr18:79977701:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2427:20214:13961	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7056	"[""INTERCHROMOSOMAL[chr16--chr18]""]"	chr16:4351232-chr18:79977701	False			0	Read count too low: 1 < 8	FAIL	1
PAIP2--AP001636.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	PAIP2^ENSG00000120727.13	chr5:139363926:+	AP001636.3^ENSG00000255240.6	chr11:59048410:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:41806:24905	.	NO_LDAS	0.0034	GT	1.8295	AG	0.8366	"[""INTERCHROMOSOMAL[chr5--chr11]""]"	chr5:139363926-chr11:59048410	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
PACRGL--RFX3	1	0	1.0	0.0	ONLY_REF_SPLICE	PACRGL^ENSG00000163138.19	chr4:20727397:+	RFX3^ENSG00000080298.15	chr9:3293258:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1467:26726:14844	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:20727397-chr9:3293258	False			0	Read count too low: 1 < 8	FAIL	1
PABPC1P3--PABPC1P12	1	0	0.14	0.0	INCL_NON_REF_SPLICE	PABPC1P3^ENSG00000230673.3	chrX:74583103:-	PABPC1P12^ENSG00000225638.1	chr10:38638030:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1102:16573:5162	.	NO_LDAS	0.0005	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr10]""]"	chrX:74583103-chr10:38638030	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
P4HA2--SMAD9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	P4HA2^ENSG00000072682.20	chr5:132227586:-	SMAD9^ENSG00000120693.14	chr13:36872842:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1466:6477:13569	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7232	"[""INTERCHROMOSOMAL[chr5--chr13]""]"	chr5:132227586-chr13:36872842	False			0	Read count too low: 1 < 8	FAIL	1
P3H3--ADA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	P3H3^ENSG00000110811.20	chr12:6839413:+	ADA^ENSG00000196839.13	chr20:44620905:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:30059:5064	.	NO_LDAS	0.0034	GT	1.5656	AG	1.7056	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:6839413-chr20:44620905	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OXR1--LINC01425	1	0	1.0	0.0	ONLY_REF_SPLICE	OXR1^ENSG00000164830.19	chr8:106679292:+	LINC01425^ENSG00000233997.5	chr21:21748395:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1172:11808:5176	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr21]""]"	chr8:106679292-chr21:21748395	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
OVGP1--WDR77	1	0	1.0	0.0	ONLY_REF_SPLICE	OVGP1^ENSG00000085465.13	chr1:111423543:-	WDR77^ENSG00000116455.14	chr1:111444124:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1113:18086:19580	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12155]""]"	chr1:111423543-chr1:111444124	False			0	Read count too low: 1 < 8	FAIL	1
OSTF1P1--ACVR1B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	OSTF1P1^ENSG00000258244.1	chr12:114588465:+	ACVR1B^ENSG00000135503.13	chr12:51994018:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1386:1421:16694	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:62.59Mb]""]"	chr12:114588465-chr12:51994018	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OSMR-AS1--CSNK1G1	1	0	1.0	0.0	ONLY_REF_SPLICE	OSMR-AS1^ENSG00000249740.3	chr5:38845668:-	CSNK1G1^ENSG00000169118.18	chr15:64216713:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:25666:22425	.	YES_LDAS	0.0034	GT	1.5656	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:38845668-chr15:64216713	False			0	Read count too low: 1 < 8	FAIL	1
OSBPL6--ZIC4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	OSBPL6^ENSG00000079156.17	chr2:178306286:+	ZIC4^ENSG00000174963.18	chr3:147405719:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:10579:10472	.	NO_LDAS	0.0034	GT	1.6895	AG	1.9219	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:178306286-chr3:147405719	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OSBPL11--NFKBIZ	1	0	1.0	0.0	ONLY_REF_SPLICE	OSBPL11^ENSG00000144909.8	chr3:125582910:-	NFKBIZ^ENSG00000144802.11	chr3:101854578:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1154:33611:20883	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7968	"[""INTRACHROMOSOMAL[chr3:23.67Mb]""]"	chr3:125582910-chr3:101854578	False			0	Read count too low: 1 < 8	FAIL	1
ORC5--UPF3A	1	0	1.0	0.0	ONLY_REF_SPLICE	ORC5^ENSG00000164815.11	chr7:104188251:-	UPF3A^ENSG00000169062.15	chr13:114298840:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1143:48246:18852	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8062	"[""INTERCHROMOSOMAL[chr7--chr13]""]"	chr7:104188251-chr13:114298840	False			0	Read count too low: 1 < 8	FAIL	1
ORC5--PUS7	1	0	1.0	0.0	ONLY_REF_SPLICE	ORC5^ENSG00000164815.11	chr7:104161072:-	PUS7^ENSG00000091127.14	chr7:105482440:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2443:4374:23069	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7232	"[""INTRACHROMOSOMAL[chr7:1.23Mb]""]"	chr7:104161072-chr7:105482440	False			0	Read count too low: 1 < 8	FAIL	1
ORC5--ARMC10	1	0	1.0	0.0	ONLY_REF_SPLICE	ORC5^ENSG00000164815.11	chr7:104161072:-	ARMC10^ENSG00000170632.14	chr7:103097277:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2367:30787:1757	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8256	"[""INTRACHROMOSOMAL[chr7:1.03Mb]""]"	chr7:104161072-chr7:103097277	False			0	Read count too low: 1 < 8	FAIL	1
OR5AK2--AL136295.17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	OR5AK2^ENSG00000181273.2	chr11:56988978:+	AL136295.17^ENSG00000287765.1	chr14:24189460:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2419:37203:13541	.	NO_LDAS	0.0034	GT	1.9656	AG	0.9183	"[""INTERCHROMOSOMAL[chr11--chr14]""]"	chr11:56988978-chr14:24189460	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OR52D1--ATP6AP2	1	0	0.25	0.0	INCL_NON_REF_SPLICE	OR52D1^ENSG00000181609.5	chr11:5489697:+	ATP6AP2^ENSG00000182220.15	chrX:40589573:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:22422:7025	.	NO_LDAS	0.0008	GT	1.3383	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chrX]""]"	chr11:5489697-chrX:40589573	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OR51I2--MST1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	OR51I2^ENSG00000187918.5	chr11:5453927:+	MST1^ENSG00000173531.15	chr3:49688203:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1173:14915:19524	.	YES_LDAS	0.0034	GT	1.9086	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:5453927-chr3:49688203	False			0	Read count too low: 1 < 8	FAIL	1
OPA1--AL162393.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	OPA1^ENSG00000198836.11	chr3:193643618:+	AL162393.1^ENSG00000232905.2	chr9:113850794:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1313:23781:13555	.	NO_LDAS	0.0011	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr3--chr9]""]"	chr3:193643618-chr9:113850794	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
OFD1--ZBED1	1	0	1.0	0.0	ONLY_REF_SPLICE	OFD1^ENSG00000046651.15	chrX:13755242:+	ZBED1^ENSG00000214717.12	chrX:2490769:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2266:16630:5792	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chrX:11.23Mb]""]"	chrX:13755242-chrX:2490769	False			0	Read count too low: 1 < 8	FAIL	1
NUDCD3--ISM2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NUDCD3^ENSG00000015676.18	chr7:44485008:-	ISM2^ENSG00000100593.18	chr14:77475222:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:2335:3060	.	NO_LDAS	0.0034	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr14]""]"	chr7:44485008-chr14:77475222	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NUDCD3--AUP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NUDCD3^ENSG00000015676.18	chr7:44385334:-	AUP1^ENSG00000115307.17	chr2:74527757:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:40220:1252	.	NO_LDAS	0.0034	AT	1.7465	AC	1.7232	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:44385334-chr2:74527757	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NTN1--AL121929.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NTN1^ENSG00000065320.9	chr17:9179956:+	AL121929.3^ENSG00000287419.1	chr10:103583698:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1427:28029:18081	.	NO_LDAS	0.0034	GT	1.8295	AG	1.7819	"[""INTERCHROMOSOMAL[chr17--chr10]""]"	chr17:9179956-chr10:103583698	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NTAN1--C19orf71	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NTAN1^ENSG00000157045.9	chr16:15047449:-	C19orf71^ENSG00000183397.5	chr19:3543287:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2386:11355:14284	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr16--chr19]""]"	chr16:15047449-chr19:3543287	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NT5M--ARMH1	1	0	1.0	0.0	ONLY_REF_SPLICE	NT5M^ENSG00000205309.14	chr17:17323245:+	ARMH1^ENSG00000198520.12	chr1:44692928:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:29113:13569	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:17323245-chr1:44692928	False			0	Read count too low: 1 < 8	FAIL	1
NT5DC3--AC024901.1	1	0	1.0	0.0	ONLY_REF_SPLICE	NT5DC3^ENSG00000111696.12	chr12:103806322:-	AC024901.1^ENSG00000255910.2	chr12:20009721:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2378:6809:12938	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr12:83.76Mb]""]"	chr12:103806322-chr12:20009721	False			0	Read count too low: 1 < 8	FAIL	1
NSUN6--DCTD	1	0	1.0	0.0	ONLY_REF_SPLICE	NSUN6^ENSG00000241058.4	chr10:18651129:-	DCTD^ENSG00000129187.15	chr4:182915575:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:7553:25858	.	YES_LDAS	0.0034	GT	1.5656	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr4]""]"	chr10:18651129-chr4:182915575	False			0	Read count too low: 1 < 8	FAIL	1
NSF--SEMA4C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NSF^ENSG00000073969.18	chr17:46749862:+	SEMA4C^ENSG00000168758.11	chr2:96861019:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:14753:22831	.	YES_LDAS	0.0034	GT	1.5329	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:46749862-chr2:96861019	False			0	Read count too low: 1 < 8	FAIL	1
NSDHL--TICAM2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NSDHL^ENSG00000147383.11	chrX:152867673:+	TICAM2^ENSG00000243414.6	chr5:115579948:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2465:27195:23672	.	NO_LDAS	0.0034	GT	1.7968	AG	1.6729	"[""INTERCHROMOSOMAL[chrX--chr5]""]"	chrX:152867673-chr5:115579948	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NRIP1--LINC02246	1	0	1.0	0.0	ONLY_REF_SPLICE	NRIP1^ENSG00000180530.11	chr21:15064745:-	LINC02246^ENSG00000281903.2	chr21:14857708:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1283:47040:27693	.	NO_LDAS	0.0034	GT	1.2729	AG	1.5546	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.04Mb]"",""NEIGHBORS[42683]""]"	chr21:15064745-chr21:14857708	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
NRIP1--LINC02246	1	0	1.0	0.0	ONLY_REF_SPLICE	NRIP1^ENSG00000180530.11	chr21:15014344:-	LINC02246^ENSG00000281903.2	chr21:14857708:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1337:46563:12294	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5546	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr21:0.04Mb]"",""NEIGHBORS[42683]""]"	chr21:15014344-chr21:14857708	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
NR2F1-AS1--SLC4A7	1	0	1.0	0.0	ONLY_REF_SPLICE	NR2F1-AS1^ENSG00000237187.9	chr5:93544795:-	SLC4A7^ENSG00000033867.16	chr3:27437526:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1247:46126:21626	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7056	"[""INTERCHROMOSOMAL[chr5--chr3]""]"	chr5:93544795-chr3:27437526	False			0	Read count too low: 1 < 8	FAIL	1
NR2F1--BUB1B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NR2F1^ENSG00000175745.14	chr5:93593749:+	BUB1B^ENSG00000156970.13	chr15:40185551:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:50470:24106	.	YES_LDAS	0.0034	GT	1.4566	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:93593749-chr15:40185551	False			0	Read count too low: 1 < 8	FAIL	1
NR2E1--FAM177A1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NR2E1^ENSG00000112333.12	chr6:108166715:+	FAM177A1^ENSG00000151327.13	chr14:35046505:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:4446:11846	.	NO_LDAS	0.0034	GC	1.5329	AG	1.7968	"[""INTERCHROMOSOMAL[chr6--chr14]""]"	chr6:108166715-chr14:35046505	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NPR2--UXS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NPR2^ENSG00000159899.15	chr9:35800845:+	UXS1^ENSG00000115652.15	chr2:106096741:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2290:48763:26530	.	NO_LDAS	0.0034	GT	1.8256	AG	1.6402	"[""INTERCHROMOSOMAL[chr9--chr2]""]"	chr9:35800845-chr2:106096741	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NPM1P35--EEF1A1P31	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NPM1P35^ENSG00000255213.1	chr11:62331240:+	EEF1A1P31^ENSG00000237859.2	chrX:154909640:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:17382:15307	.	NO_LDAS	0.0034	GT	1.6895	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chrX]""]"	chr11:62331240-chrX:154909640	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NPIPA2--SETD4	1	0	0.07	0.0	ONLY_REF_SPLICE	NPIPA2^ENSG00000254852.8	chr16:14748185:+	SETD4^ENSG00000185917.14	chr21:36057204:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1492:34525:14676	.	YES_LDAS	0.0002	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr21]""]"	chr16:14748185-chr21:36057204	False			0	Read count too low: 1 < 8	FAIL	1
NPC2--PGP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NPC2^ENSG00000119655.11	chr14:74493212:-	PGP^ENSG00000184207.9	chr16:2214024:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:50988:22621	.	YES_LDAS	0.0034	GT	1.5058	AG	1.6895	"[""INTERCHROMOSOMAL[chr14--chr16]""]"	chr14:74493212-chr16:2214024	False			0	Read count too low: 1 < 8	FAIL	1
NPAS3--RHOXF1P3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NPAS3^ENSG00000151322.20	chr14:33800866:+	RHOXF1P3^ENSG00000282933.2	chrX:119943286:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:45624:27651	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr14--chrX]""]"	chr14:33800866-chrX:119943286	False			0	Read count too low: 1 < 8	FAIL	1
NOXA1--GAMT	1	0	1.0	0.0	ONLY_REF_SPLICE	NOXA1^ENSG00000188747.8	chr9:137426330:+	GAMT^ENSG00000130005.13	chr19:1397499:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1158:43206:28926	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr9--chr19]""]"	chr9:137426330-chr19:1397499	False			0	Read count too low: 1 < 8	FAIL	1
NOL11--ABCA9	1	0	1.0	0.0	ONLY_REF_SPLICE	NOL11^ENSG00000130935.10	chr17:67743586:+	ABCA9^ENSG00000154258.17	chr17:69051139:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2315:23725:10514	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTRACHROMOSOMAL[chr17:1.23Mb]""]"	chr17:67743586-chr17:69051139	False			0	Read count too low: 1 < 8	FAIL	1
NLRP14--ZNF215	1	0	1.0	0.0	ONLY_REF_SPLICE	NLRP14^ENSG00000158077.5	chr11:7049838:+	ZNF215^ENSG00000149054.16	chr11:6955690:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:28708:9421	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7819	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[19475]""]"	chr11:7049838-chr11:6955690	False			0	Read count too low: 1 < 8	FAIL	1
NKX3-1--SCAND2P	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NKX3-1^ENSG00000167034.10	chr8:23679802:-	SCAND2P^ENSG00000176700.20	chr15:84646154:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1380:37729:16946	.	NO_LDAS	0.0034	GT	1.9899	AG	1.5656	"[""INTERCHROMOSOMAL[chr8--chr15]""]"	chr8:23679802-chr15:84646154	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NKD2--DPYS	1	0	0.33	0.0	INCL_NON_REF_SPLICE	NKD2^ENSG00000145506.14	chr5:1009000:+	DPYS^ENSG00000147647.13	chr8:104466990:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:29194:2583	.	NO_LDAS	0.0011	GC	1.2729	AG	0.8366	"[""INTERCHROMOSOMAL[chr5--chr8]""]"	chr5:1009000-chr8:104466990	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NHLRC2--LHX2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NHLRC2^ENSG00000196865.4	chr10:113855004:+	LHX2^ENSG00000106689.11	chr9:124015276:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1244:49831:21290	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:113855004-chr9:124015276	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NHEJ1--CNPPD1	1	0	1.0	0.0	ONLY_REF_SPLICE	NHEJ1^ENSG00000187736.13	chr2:219157472:-	CNPPD1^ENSG00000115649.16	chr2:219176847:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1250:40342:25479	.	YES_LDAS	0.0034	GT	1.7819	AG	1.4716	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11032]""]"	chr2:219157472-chr2:219176847	False			0	Read count too low: 1 < 8	FAIL	1
NGDN--THTPA	1	0	1.0	0.0	ONLY_REF_SPLICE	NGDN^ENSG00000129460.16	chr14:23477560:+	THTPA^ENSG00000259431.6	chr14:23558695:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1303:27616:18936	.	YES_LDAS	0.0034	GT	1.5329	AG	1.8892	"[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[46126]""]"	chr14:23477560-chr14:23558695	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
NFKB1--TANC1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NFKB1^ENSG00000109320.13	chr4:102537956:+	TANC1^ENSG00000115183.15	chr2:159231741:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2324:42607:6395	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr4--chr2]""]"	chr4:102537956-chr2:159231741	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
NEPRO--C3orf52	1	0	1.0	0.0	ONLY_REF_SPLICE	NEPRO^ENSG00000163608.15	chr3:113019542:-	C3orf52^ENSG00000114529.13	chr3:112102838:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1135:19203:27651	.	YES_LDAS	0.0034	GT	1.4295	AG	1.7465	"[""INTRACHROMOSOMAL[chr3:0.87Mb]""]"	chr3:113019542-chr3:112102838	False			0	Read count too low: 1 < 8	FAIL	1
NEK8--ADCK2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NEK8^ENSG00000160602.14	chr17:28737993:+	ADCK2^ENSG00000133597.11	chr7:140673740:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1314:32333:10206	.	NO_LDAS	0.0034	GT	1.8256	AG	1.7465	"[""INTERCHROMOSOMAL[chr17--chr7]""]"	chr17:28737993-chr7:140673740	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NEK2--GTF2F2	1	0	1.0	0.0	ONLY_REF_SPLICE	NEK2^ENSG00000117650.13	chr1:211667106:-	GTF2F2^ENSG00000188342.12	chr13:45283442:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2225:23628:11103	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr13]""]"	chr1:211667106-chr13:45283442	False			0	Read count too low: 1 < 8	FAIL	1
NEK2--ABCA13	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NEK2^ENSG00000117650.13	chr1:211673682:-	ABCA13^ENSG00000179869.15	chr7:48524412:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:5223:21794	.	NO_LDAS	0.0034	GT	1.9899	AG	1.8062	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:211673682-chr7:48524412	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NEFM--CYP11A1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NEFM^ENSG00000104722.14	chr8:24918579:+	CYP11A1^ENSG00000140459.18	chr15:74361783:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2244:22714:1841	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr15]""]"	chr8:24918579-chr15:74361783	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NEBL--FGFR1OP2	1	0	1.0	0.0	ONLY_REF_SPLICE	NEBL^ENSG00000078114.19	chr10:20880794:-	FGFR1OP2^ENSG00000111790.14	chr12:26963342:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1283:40091:17731	.	NO_LDAS	0.0034	GT	1.7232	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr12]""]"	chr10:20880794-chr12:26963342	False			0	Read count too low: 1 < 8	FAIL	1
NDUFC2--KCTD14	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFC2^ENSG00000151366.13	chr11:78079579:-	KCTD14^ENSG00000151364.17	chr11:78038758:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1243:49791:19426	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]"	chr11:78079579-chr11:78038758	False			0	Excluded annotation pattern: ConjoinG	FAIL	1
NDUFC2--KCTD14	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFC2^ENSG00000151366.13	chr11:78072998:-	KCTD14^ENSG00000151364.17	chr11:78038758:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:35779:6535	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8295	"[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[22106]""]"	chr11:78072998-chr11:78038758	False			0	Excluded annotation pattern: ConjoinG	FAIL	1
NDUFAF6--NPIPB10P	1	0	0.06	0.0	ONLY_REF_SPLICE	NDUFAF6^ENSG00000156170.13	chr8:95044595:+	NPIPB10P^ENSG00000196796.5	chr16:29050502:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:25521:10963	.	NO_LDAS	0.0002	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr16]""]"	chr8:95044595-chr16:29050502	False			0	Read count too low: 1 < 8	FAIL	1
NDUFAB1--C16orf70	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFAB1^ENSG00000004779.10	chr16:23595429:-	C16orf70^ENSG00000125149.12	chr16:67139984:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2426:30650:3144	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8062	"[""INTRACHROMOSOMAL[chr16:43.51Mb]""]"	chr16:23595429-chr16:67139984	False			0	Read count too low: 1 < 8	FAIL	1
NDUFA6-DT--LINC01160	1	0	0.5	0.0	INCL_NON_REF_SPLICE	NDUFA6-DT^ENSG00000237037.9	chr22:42121735:+	LINC01160^ENSG00000231346.5	chr1:111608601:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162	.	YES_LDAS	0.0017	GT	1.8323	AG	1.7232	"[""INTERCHROMOSOMAL[chr22--chr1]""]"	chr22:42121735-chr1:111608601	False			0	Read count too low: 1 < 8	FAIL	1
NDUFA6-DT--AL359813.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	NDUFA6-DT^ENSG00000237037.9	chr22:42121735:+	AL359813.1^ENSG00000287055.1	chr6:43424978:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1146:9664:5162	.	YES_LDAS	0.0017	GT	1.8323	AG	1.7232	"[""INTERCHROMOSOMAL[chr22--chr6]""]"	chr22:42121735-chr6:43424978	False			0	Read count too low: 1 < 8	FAIL	1
NDUFA5--IQUB	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NDUFA5^ENSG00000128609.16	chr7:123542103:-	IQUB^ENSG00000164675.11	chr7:123512344:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2468:20198:7656	.	NO_LDAS	0.0034	GT	1.7465	AG	1.7968	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""NEIGHBORS[1920]""]"	chr7:123542103-chr7:123512344	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
NDUFA4--SLC39A10	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFA4^ENSG00000189043.10	chr7:10940016:-	SLC39A10^ENSG00000196950.14	chr2:195680032:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:31240:22383	.	YES_LDAS	0.0034	GT	1.8062	AG	1.2419	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:10940016-chr2:195680032	False			0	Read count too low: 1 < 8	FAIL	1
NDUFA4--MGC4859	1	0	1.0	0.0	ONLY_REF_SPLICE	NDUFA4^ENSG00000189043.10	chr7:10938090:-	MGC4859^ENSG00000283117.1	chr7:10561577:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2387:47768:15671	.	NO_LDAS	0.0034	GT	1.7232	AG	1.7465	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.15Mb]""]"	chr7:10938090-chr7:10561577	False			0	Read count too low: 1 < 8	FAIL	1
NDST2--CAMK2G	1	0	1.0	0.0	ONLY_REF_SPLICE	NDST2^ENSG00000166507.19	chr10:73805900:-	CAMK2G^ENSG00000148660.21	chr10:73873083:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:2982:7936	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5058	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[703]""]"	chr10:73805900-chr10:73873083	False			0	Read count too low: 1 < 8	FAIL	1
NCAPG2--AC073636.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NCAPG2^ENSG00000146918.20	chr7:158689856:-	AC073636.1^ENSG00000227098.2	chr2:176846342:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2122:28644:7460	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:158689856-chr2:176846342	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
NCAPG2--AC002066.1	1	0	1.0	0.0	ONLY_REF_SPLICE	NCAPG2^ENSG00000146918.20	chr7:158671514:-	AC002066.1^ENSG00000237813.4	chr7:116243936:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:9826:14242	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7819	"[""INTRACHROMOSOMAL[chr7:42.13Mb]""]"	chr7:158671514-chr7:116243936	False			0	Read count too low: 1 < 8	FAIL	1
NCAPD3--ALDOA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NCAPD3^ENSG00000151503.13	chr11:134192689:-	ALDOA^ENSG00000149925.22	chr16:30065788:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1361:11477:14634	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTERCHROMOSOMAL[chr11--chr16]""]"	chr11:134192689-chr16:30065788	False			0	Read count too low: 1 < 8	FAIL	1
NBR2--DHX29	1	0	1.0	0.0	ONLY_REF_SPLICE	NBR2^ENSG00000198496.12	chr17:43125770:+	DHX29^ENSG00000067248.10	chr5:55281515:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:1874:6269	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr5]""]"	chr17:43125770-chr5:55281515	False			0	Read count too low: 1 < 8	FAIL	1
NBPF3--AC239859.1	1	0	0.33	0.0	ONLY_REF_SPLICE	NBPF3^ENSG00000142794.19	chr1:21479400:+	AC239859.1^ENSG00000203825.4	chr1:143544151:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1394:26419:12070	.	NO_LDAS	0.0011	GT	1.8062	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:122.06Mb]""]"	chr1:21479400-chr1:143544151	False			0	Read count too low: 1 < 8	FAIL	1
NBN--ZDHHC13	1	0	1.0	0.0	ONLY_REF_SPLICE	NBN^ENSG00000104320.14	chr8:89982722:-	ZDHHC13^ENSG00000177054.14	chr11:19164301:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:18547:27469	.	NO_LDAS	0.0034	GT	1.9329	AG	1.585	"[""INTERCHROMOSOMAL[chr8--chr11]""]"	chr8:89982722-chr11:19164301	False			0	Read count too low: 1 < 8	FAIL	1
NBEAP2--C2orf27A	1	0	1.0	0.0	ONLY_REF_SPLICE	NBEAP2^ENSG00000197927.13	chr2:131750830:+	C2orf27A^ENSG00000287151.1	chr2:131684709:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1360:11784:3816	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS_OVERLAP:+:+:[628]""]"	chr2:131750830-chr2:131684709	False			0	Read count too low: 1 < 8	FAIL	1
NARS2--GAB2	1	0	1.0	0.0	ONLY_REF_SPLICE	NARS2^ENSG00000137513.10	chr11:78441091:-	GAB2^ENSG00000033327.13	chr11:78280901:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1334:7383:23546	.	NO_LDAS	0.0034	GT	1.9219	AG	1.8256	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[17620]""]"	chr11:78441091-chr11:78280901	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
NAPSA--AC008655.2	1	0	1.0	0.0	ONLY_REF_SPLICE	NAPSA^ENSG00000131400.8	chr19:50365539:-	AC008655.2^ENSG00000269392.1	chr19:50366017:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2376:27268:2892	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr19:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[50]""]"	chr19:50365539-chr19:50366017	False			0	Read count too low: 1 < 8	FAIL	1
NAP1L4--RMND1	1	0	1.0	0.0	ONLY_REF_SPLICE	NAP1L4^ENSG00000205531.13	chr11:2976024:-	RMND1^ENSG00000155906.19	chr6:151433230:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2114:9834:10949	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8323	"[""INTERCHROMOSOMAL[chr11--chr6]""]"	chr11:2976024-chr6:151433230	False			0	Read count too low: 1 < 8	FAIL	1
NAA40--COX8A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	NAA40^ENSG00000110583.13	chr11:63954450:+	COX8A^ENSG00000176340.4	chr11:63976225:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2406:25351:10332	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7968	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[17301]""]"	chr11:63954450-chr11:63976225	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MYL6P5--DEDD	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MYL6P5^ENSG00000228118.3	chr17:71621047:+	DEDD^ENSG00000158796.17	chr1:161130847:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1171:6987:29109	.	YES_LDAS	0.0034	GT	1.9899	AG	1.7056	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:71621047-chr1:161130847	False			0	Read count too low: 1 < 8	FAIL	1
MYL5--MED23	1	0	0.5	0.0	INCL_NON_REF_SPLICE	MYL5^ENSG00000215375.6	chr4:680018:+	MED23^ENSG00000112282.18	chr6:131628173:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:37866:10879	.	NO_LDAS	0.0017	GT	1.6402	AG	1.5301	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:680018-chr6:131628173	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MYH11--AL080243.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	MYH11^ENSG00000133392.18	chr16:15757893:-	AL080243.1^ENSG00000237214.3	chr22:41064387:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2492:13637:12602	.	YES_LDAS	0.0008	AT	1.7819	AC	1.9656	"[""INTERCHROMOSOMAL[chr16--chr22]""]"	chr16:15757893-chr22:41064387	False			0	Read count too low: 1 < 8	FAIL	1
MYB--FAM83B	1	0	1.0	0.0	ONLY_REF_SPLICE	MYB^ENSG00000118513.19	chr6:135181536:+	FAM83B^ENSG00000168143.9	chr6:54870187:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1133:15950:17899	.	YES_LDAS	0.0034	GT	1.5656	AG	1.5656	"[""INTRACHROMOSOMAL[chr6:80.24Mb]""]"	chr6:135181536-chr6:54870187	False			0	Read count too low: 1 < 8	FAIL	1
MUTYH--TESK2	1	0	1.0	0.0	ONLY_REF_SPLICE	MUTYH^ENSG00000132781.19	chr1:45340219:-	TESK2^ENSG00000070759.17	chr1:45355449:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1112:24065:18866	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9899	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2990]""]"	chr1:45340219-chr1:45355449	False			0	Read count too low: 1 < 8	FAIL	1
MUTYH--SRD5A1	1	0	1.0	0.0	ONLY_REF_SPLICE	MUTYH^ENSG00000132781.19	chr1:45334391:-	SRD5A1^ENSG00000145545.12	chr5:6656078:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1425:25950:20645	.	NO_LDAS	0.0034	GT	1.8062	AG	1.2729	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:45334391-chr5:6656078	False			0	Read count too low: 1 < 8	FAIL	1
MTX2--LNPK	1	0	1.0	0.0	ONLY_REF_SPLICE	MTX2^ENSG00000128654.14	chr2:176269669:+	LNPK^ENSG00000144320.14	chr2:175979868:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1411:25820:21430	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr2:0.27Mb]""]"	chr2:176269669-chr2:175979868	False			0	Read count too low: 1 < 8	FAIL	1
MTURN--ZNRF2	1	0	1.0	0.0	ONLY_REF_SPLICE	MTURN^ENSG00000180354.16	chr7:30135298:+	ZNRF2^ENSG00000180233.11	chr7:30323642:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2128:22544:25816	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.12Mb]""]"	chr7:30135298-chr7:30323642	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
MTPAP--PLAA	1	0	1.0	0.0	ONLY_REF_SPLICE	MTPAP^ENSG00000107951.15	chr10:30315963:-	PLAA^ENSG00000137055.15	chr9:26935206:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1495:19308:17240	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:30315963-chr9:26935206	False			0	Read count too low: 1 < 8	FAIL	1
MTND6P22--KCTD9	1	0	0.33	0.0	INCL_NON_REF_SPLICE	MTND6P22^ENSG00000270230.1	chr5:100046781:+	KCTD9^ENSG00000104756.16	chr8:25446250:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1395:50511:27231	.	NO_LDAS	0.0011	GT	1.5219	AG	1.6895	"[""INTERCHROMOSOMAL[chr5--chr8]""]"	chr5:100046781-chr8:25446250	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MTMR14--LINC02280	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MTMR14^ENSG00000163719.20	chr3:9688711:+	LINC02280^ENSG00000260792.1	chr14:104661909:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:18086:13555	.	NO_LDAS	0.0034	GC	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr3--chr14]""]"	chr3:9688711-chr14:104661909	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MTMR10--AAGAB	1	0	1.0	0.0	ONLY_REF_SPLICE	MTMR10^ENSG00000166912.17	chr15:30990777:-	AAGAB^ENSG00000103591.13	chr15:67236820:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:28231:14256	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chr15:36.21Mb]""]"	chr15:30990777-chr15:67236820	False			0	Read count too low: 1 < 8	FAIL	1
MTHFSD--LMF1	1	0	1.0	0.0	ONLY_REF_SPLICE	MTHFSD^ENSG00000103248.19	chr16:86546559:-	LMF1^ENSG00000103227.19	chr16:931793:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:27705:6395	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:85.55Mb]""]"	chr16:86546559-chr16:931793	False			0	Read count too low: 1 < 8	FAIL	1
MTHFSD--DPYS	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MTHFSD^ENSG00000103248.19	chr16:86552033:-	DPYS^ENSG00000147647.13	chr8:104429397:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1213:46134:2387	.	NO_LDAS	0.0034	GT	1.8062	AG	1.6049	"[""INTERCHROMOSOMAL[chr16--chr8]""]"	chr16:86552033-chr8:104429397	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MTHFS--AC015871.7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MTHFS^ENSG00000136371.11	chr15:79845249:-	AC015871.7^ENSG00000288592.1	chr15:79899125:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1481:12116:6605	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8256	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1652]""]"	chr15:79845249-chr15:79899125	False			0	Read count too low: 1 < 8	FAIL	1
MTERF4--GPR89A	1	0	0.5	0.0	ONLY_REF_SPLICE	MTERF4^ENSG00000122085.17	chr2:241097243:-	GPR89A^ENSG00000117262.19	chr1:145663329:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1433:1914:2135	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr2--chr1]""]"	chr2:241097243-chr1:145663329	False			0	Read count too low: 1 < 8	FAIL	1
MT-TA--CHRD	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MT-TA^ENSG00000210127.1	chrM:5607:-	CHRD^ENSG00000090539.15	chr3:184381331:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:52096:9772	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTERCHROMOSOMAL[chrM--chr3]""]"	chrM:5607-chr3:184381331	False			0	Read count too low: 1 < 8	FAIL	1
MSH3--TENT2	1	0	1.0	0.0	ONLY_REF_SPLICE	MSH3^ENSG00000113318.11	chr5:80813741:+	TENT2^ENSG00000164329.13	chr5:79619612:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1277:48796:18403	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTRACHROMOSOMAL[chr5:0.97Mb]""]"	chr5:80813741-chr5:79619612	False			0	Read count too low: 1 < 8	FAIL	1
MRTO4--MUTYH	1	0	1.0	0.0	ONLY_REF_SPLICE	MRTO4^ENSG00000053372.5	chr1:19251863:+	MUTYH^ENSG00000132781.19	chr1:45334511:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1234:15004:17184	.	YES_LDAS	0.0034	GT	1.5058	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:26.07Mb]""]"	chr1:19251863-chr1:45334511	False			0	Read count too low: 1 < 8	FAIL	1
MRRF--TMEM135	1	0	1.0	0.0	ONLY_REF_SPLICE	MRRF^ENSG00000148187.18	chr9:122285287:+	TMEM135^ENSG00000166575.17	chr11:87318137:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1332:36709:10640	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr9--chr11]""]"	chr9:122285287-chr11:87318137	False			0	Read count too low: 1 < 8	FAIL	1
MRPS7--GNG10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPS7^ENSG00000125445.11	chr17:75263507:+	GNG10^ENSG00000242616.4	chr9:111669272:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:22495:23686	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr9]""]"	chr17:75263507-chr9:111669272	False			0	Read count too low: 1 < 8	FAIL	1
MRPS6--MAPK8	1	0	1.0	0.0	ONLY_REF_SPLICE	MRPS6^ENSG00000243927.6	chr21:34073745:+	MAPK8^ENSG00000107643.16	chr10:48424514:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:36693:16638	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr21--chr10]""]"	chr21:34073745-chr10:48424514	False			0	Read count too low: 1 < 8	FAIL	1
MRPS35--KATNBL1	1	0	1.0	0.0	ONLY_REF_SPLICE	MRPS35^ENSG00000061794.13	chr12:27710955:+	KATNBL1^ENSG00000134152.11	chr15:34163690:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2231:23943:13751	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7819	"[""INTERCHROMOSOMAL[chr12--chr15]""]"	chr12:27710955-chr15:34163690	False			0	Read count too low: 1 < 8	FAIL	1
MRPS31--UCHL3	1	0	1.0	0.0	ONLY_REF_SPLICE	MRPS31^ENSG00000102738.8	chr13:40756873:-	UCHL3^ENSG00000118939.18	chr13:75560753:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2481:5150:14970	.	YES_LDAS	0.0034	GT	1.6402	AG	1.4295	"[""INTRACHROMOSOMAL[chr13:34.78Mb]""]"	chr13:40756873-chr13:75560753	False			0	Read count too low: 1 < 8	FAIL	1
MRPS28--AC036214.1	1	0	1.0	0.0	ONLY_REF_SPLICE	MRPS28^ENSG00000147586.10	chr8:80002999:-	AC036214.1^ENSG00000249328.3	chr8:79830581:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1219:7569:28632	.	YES_LDAS	0.0034	GT	1.4295	AG	1.9329	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.05Mb]"",""NEIGHBORS[46958]""]"	chr8:80002999-chr8:79830581	False			0	Read count too low: 1 < 8	FAIL	1
MRPS22--RPL5P27	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPS22^ENSG00000175110.13	chr3:139355790:+	RPL5P27^ENSG00000228195.2	chr10:116751246:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2112:12836:3088	.	NO_LDAS	0.0034	GT	1.5329	AG	1.9219	"[""INTERCHROMOSOMAL[chr3--chr10]""]"	chr3:139355790-chr10:116751246	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MRPS18A--NIM1K	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPS18A^ENSG00000096080.12	chr6:43687668:-	NIM1K^ENSG00000177453.7	chr5:43277180:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2448:32147:21570	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr5]""]"	chr6:43687668-chr5:43277180	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MRPL49--MRPL49P1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPL49^ENSG00000149792.9	chr11:65124652:+	MRPL49P1^ENSG00000224296.3	chr5:64675030:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:17471:16385	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chr5]""]"	chr11:65124652-chr5:64675030	False			0	Read count too low: 1 < 8	FAIL	1
MRPL24--HYKK	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPL24^ENSG00000143314.12	chr1:156737458:-	HYKK^ENSG00000188266.14	chr15:78527382:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2494:29121:17170	.	NO_LDAS	0.0034	GT	1.7819	AG	1.5219	"[""INTERCHROMOSOMAL[chr1--chr15]""]"	chr1:156737458-chr15:78527382	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MRPL19--TLE4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRPL19^ENSG00000115364.14	chr2:75652216:+	TLE4^ENSG00000106829.20	chr9:79704805:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1424:45819:26839	.	NO_LDAS	0.0034	GT	1.2419	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr9]""]"	chr2:75652216-chr9:79704805	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MRPL17--TPRXL	1	0	0.5	0.0	INCL_NON_REF_SPLICE	MRPL17^ENSG00000158042.9	chr11:6682195:-	TPRXL^ENSG00000180438.15	chr3:14064094:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1316:45988:18137	.	NO_LDAS	0.0017	GT	1.9086	AG	1.5656	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:6682195-chr3:14064094	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MROH7--TMEM91	1	0	1.0	0.0	ONLY_REF_SPLICE	MROH7^ENSG00000184313.20	chr1:54674151:+	TMEM91^ENSG00000142046.15	chr19:41378281:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1248:50001:5050	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:54674151-chr19:41378281	False			0	Read count too low: 1 < 8	FAIL	1
MRM1--HAUS7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MRM1^ENSG00000278619.5	chr17:36602176:+	HAUS7^ENSG00000213397.11	chrX:153462621:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:36467:25718	.	NO_LDAS	0.0034	GT	1.7968	AG	1.9899	"[""INTERCHROMOSOMAL[chr17--chrX]""]"	chr17:36602176-chrX:153462621	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MPV17--PHKG1	1	0	1.0	0.0	ONLY_REF_SPLICE	MPV17^ENSG00000115204.15	chr2:27322448:-	PHKG1^ENSG00000164776.10	chr7:56088975:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1339:12787:9057	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr7]""]"	chr2:27322448-chr7:56088975	False			0	Read count too low: 1 < 8	FAIL	1
MPP6--MFAP3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MPP6^ENSG00000105926.16	chr7:24625736:+	MFAP3^ENSG00000037749.13	chr5:154121718:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2249:12714:24344	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr5]""]"	chr7:24625736-chr5:154121718	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MPHOSPH9--RGS10	1	0	1.0	0.0	ONLY_REF_SPLICE	MPHOSPH9^ENSG00000051825.15	chr12:123210056:-	RGS10^ENSG00000148908.15	chr10:119500259:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2191:34274:2639	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr10]""]"	chr12:123210056-chr10:119500259	False			0	Read count too low: 1 < 8	FAIL	1
MORN4--ZBTB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MORN4^ENSG00000171160.18	chr10:97616231:-	ZBTB1^ENSG00000126804.13	chr14:64516600:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:11962:20407	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr14]""]"	chr10:97616231-chr14:64516600	False			0	Read count too low: 1 < 8	FAIL	1
MORN1--ODF2L	1	0	1.0	0.0	ONLY_REF_SPLICE	MORN1^ENSG00000116151.14	chr1:2372481:-	ODF2L^ENSG00000122417.15	chr1:86348878:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:5142:26951	.	YES_LDAS	0.0034	GT	1.8323	AG	1.6402	"[""INTRACHROMOSOMAL[chr1:83.96Mb]""]"	chr1:2372481-chr1:86348878	False			0	Read count too low: 1 < 8	FAIL	1
MOB4--AC019080.1	1	0	1.0	0.0	ONLY_REF_SPLICE	MOB4^ENSG00000115540.15	chr2:197516146:+	AC019080.1^ENSG00000213963.6	chr2:177311328:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:39711:23994	.	YES_LDAS	0.0034	GT	1.5656	AG	1.7819	"[""INTRACHROMOSOMAL[chr2:20.12Mb]""]"	chr2:197516146-chr2:177311328	False			0	Read count too low: 1 < 8	FAIL	1
MNAT1--SMAP1	1	0	1.0	0.0	ONLY_REF_SPLICE	MNAT1^ENSG00000020426.11	chr14:60798160:+	SMAP1^ENSG00000112305.15	chr6:70836941:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:48618:4027	.	YES_LDAS	0.0034	GT	1.5058	AG	1.7968	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:60798160-chr6:70836941	False			0	Read count too low: 1 < 8	FAIL	1
MNAT1--SLC38A6	1	0	1.0	0.0	ONLY_REF_SPLICE	MNAT1^ENSG00000020426.11	chr14:60818847:+	SLC38A6^ENSG00000139974.16	chr14:60982508:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2495:48723:4517	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[11149]""]"	chr14:60818847-chr14:60982508	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MNAT1--GPHN	1	0	1.0	0.0	ONLY_REF_SPLICE	MNAT1^ENSG00000020426.11	chr14:60879835:+	GPHN^ENSG00000171723.16	chr14:67159415:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:47145:15293	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr14:5.54Mb]""]"	chr14:60879835-chr14:67159415	False			0	Read count too low: 1 < 8	FAIL	1
MNAT1--C22orf34	1	0	1.0	0.0	ONLY_REF_SPLICE	MNAT1^ENSG00000020426.11	chr14:60818847:+	C22orf34^ENSG00000188511.12	chr22:49441212:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2453:37300:12952	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7968	"[""INTERCHROMOSOMAL[chr14--chr22]""]"	chr14:60818847-chr22:49441212	False			0	Read count too low: 1 < 8	FAIL	1
MLX--GPR34	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MLX^ENSG00000108788.12	chr17:42568506:+	GPR34^ENSG00000171659.15	chrX:41688967:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2398:45713:2527	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7056	"[""INTERCHROMOSOMAL[chr17--chrX]""]"	chr17:42568506-chrX:41688967	False			0	Read count too low: 1 < 8	FAIL	1
MLLT3--FAM20C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MLLT3^ENSG00000171843.17	chr9:20622297:-	FAM20C^ENSG00000177706.9	chr7:255926:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:31936:5008	.	NO_LDAS	0.0034	GT	0.9056	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr7]""]"	chr9:20622297-chr7:255926	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MIS12--RABEP1	1	0	1.0	0.0	ONLY_REF_SPLICE	MIS12^ENSG00000167842.16	chr17:5486684:+	RABEP1^ENSG00000029725.17	chr17:5346790:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:26605:21164	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7465	"[""INTRACHROMOSOMAL[chr17:0.10Mb]"",""LOCAL_REARRANGEMENT:+:[99945]""]"	chr17:5486684-chr17:5346790	False			0	Read count too low: 1 < 8	FAIL	1
MIR937--NRBP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MIR937^ENSG00000284224.1	chr8:143813030:-	NRBP2^ENSG00000185189.18	chr8:143839056:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2463:15408:4125	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9899	"[""INTRACHROMOSOMAL[chr8:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[20541]""]"	chr8:143813030-chr8:143839056	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MIR4660--CLCN2	1	0	0.33	0.0	INCL_NON_REF_SPLICE	MIR4660^ENSG00000263407.1	chr8:9048511:+	CLCN2^ENSG00000114859.16	chr3:184355460:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921	.	NO_LDAS	0.0011	GT	1.6402	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chr3]""]"	chr8:9048511-chr3:184355460	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MIR4435-2HG--PHF23	1	0	1.0	0.0	ONLY_REF_SPLICE	MIR4435-2HG^ENSG00000172965.17	chr2:111494885:-	PHF23^ENSG00000040633.13	chr17:7237660:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1347:42380:8721	.	YES_LDAS	0.0034	GT	1.7232	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr17]""]"	chr2:111494885-chr17:7237660	False			0	Read count too low: 1 < 8	FAIL	1
MIR4435-2HG--HMGN5	1	0	1.0	0.0	ONLY_REF_SPLICE	MIR4435-2HG^ENSG00000172965.17	chr2:111494885:-	HMGN5^ENSG00000198157.11	chrX:81118485:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1381:50818:2794	.	YES_LDAS	0.0034	GT	1.7232	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chrX]""]"	chr2:111494885-chrX:81118485	False			0	Read count too low: 1 < 8	FAIL	1
MIR3605--TPTEP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MIR3605^ENSG00000284154.1	chr1:33331376:-	TPTEP2^ENSG00000244627.5	chr22:38381968:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1350:47170:16596	.	NO_LDAS	0.0034	GC	1.9656	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr22]""]"	chr1:33331376-chr22:38381968	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MIR222HG--METTL14	1	0	1.0	0.0	ONLY_REF_SPLICE	MIR222HG^ENSG00000270069.1	chrX:45769786:-	METTL14^ENSG00000145388.15	chr4:118694436:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:28004:19748	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr4]""]"	chrX:45769786-chr4:118694436	False			0	Read count too low: 1 < 8	FAIL	1
MIR222HG--CDK19	1	0	1.0	0.0	ONLY_REF_SPLICE	MIR222HG^ENSG00000270069.1	chrX:45769786:-	CDK19^ENSG00000155111.15	chr6:110746201:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:12455:25129	.	YES_LDAS	0.0034	GT	1.8892	AG	1.1589	"[""INTERCHROMOSOMAL[chrX--chr6]""]"	chrX:45769786-chr6:110746201	False			0	Read count too low: 1 < 8	FAIL	1
MIR2052HG--GDAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MIR2052HG^ENSG00000254349.6	chr8:74702456:+	GDAP1^ENSG00000104381.14	chr8:74360303:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1391:12431:10907	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8062	"[""INTRACHROMOSOMAL[chr8:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[81768]""]"	chr8:74702456-chr8:74360303	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MIR181A1HG--PTK2B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MIR181A1HG^ENSG00000229989.4	chr1:198899190:-	PTK2B^ENSG00000120899.18	chr8:27444241:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:28611:3873	.	YES_LDAS	0.0034	AT	1.8256	AC	1.7232	"[""INTERCHROMOSOMAL[chr1--chr8]""]"	chr1:198899190-chr8:27444241	False			0	Read count too low: 1 < 8	FAIL	1
MIGA2--ATP5F1C	1	0	1.0	0.0	ONLY_REF_SPLICE	MIGA2^ENSG00000148343.18	chr9:129059271:+	ATP5F1C^ENSG00000165629.20	chr10:7797047:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1239:44815:4979	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr10]""]"	chr9:129059271-chr10:7797047	False			0	Read count too low: 1 < 8	FAIL	1
MICOS10--MOB4	1	0	1.0	0.0	ONLY_REF_SPLICE	MICOS10^ENSG00000173436.15	chr1:19597109:+	MOB4^ENSG00000115540.15	chr2:197535530:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2174:48472:9267	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:19597109-chr2:197535530	False			0	Read count too low: 1 < 8	FAIL	1
MGST1--AC007529.2	1	0	1.0	0.0	ONLY_REF_SPLICE	MGST1^ENSG00000008394.13	chr12:16383604:+	AC007529.2^ENSG00000283240.1	chr12:16661766:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:13895:21234	.	YES_LDAS	0.0034	GT	1.9329	AG	1.6895	"[""BodyMap"",""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[52507]""]"	chr12:16383604-chr12:16661766	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MFSD14B--FRA10AC1	1	0	1.0	0.0	ONLY_REF_SPLICE	MFSD14B^ENSG00000148110.16	chr9:94441099:+	FRA10AC1^ENSG00000148690.12	chr10:93700106:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1266:18798:12434	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr10]""]"	chr9:94441099-chr10:93700106	False			0	Read count too low: 1 < 8	FAIL	1
MFSD14A--MRC1	1	0	1.0	0.0	ONLY_REF_SPLICE	MFSD14A^ENSG00000156875.14	chr1:100050004:+	MRC1^ENSG00000260314.3	chr10:17871982:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:38117:26138	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:100050004-chr10:17871982	False			0	Read count too low: 1 < 8	FAIL	1
MFSD1--IQCJ	1	0	1.0	0.0	ONLY_REF_SPLICE	MFSD1^ENSG00000118855.21	chr3:158827337:+	IQCJ^ENSG00000214216.11	chr3:159245843:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2369:28878:8398	.	YES_LDAS	0.0034	GT	1.8062	AG	1.4716	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr3:0.13Mb]""]"	chr3:158827337-chr3:159245843	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
MFGE8--CEPT1	1	0	1.0	0.0	ONLY_REF_SPLICE	MFGE8^ENSG00000140545.15	chr15:88905757:-	CEPT1^ENSG00000134255.14	chr1:111147642:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:18822:22873	.	YES_LDAS	0.0034	GT	1.9219	AG	1.7819	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:88905757-chr1:111147642	False			0	Read count too low: 1 < 8	FAIL	1
MFAP3--IL1RAPL2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MFAP3^ENSG00000037749.13	chr5:154053312:+	IL1RAPL2^ENSG00000189108.13	chrX:105717453:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2413:12083:3326	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7819	"[""INTERCHROMOSOMAL[chr5--chrX]""]"	chr5:154053312-chrX:105717453	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
METTL27--LINC01348	1	0	0.5	0.0	INCL_NON_REF_SPLICE	METTL27^ENSG00000165171.11	chr7:73840031:-	LINC01348^ENSG00000280587.1	chr1:235065586:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:3977:15180	.	YES_LDAS	0.0017	GT	1.9086	AG	1.9219	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:73840031-chr1:235065586	False			0	Read count too low: 1 < 8	FAIL	1
METTL27--ISG20	1	0	1.0	0.0	INCL_NON_REF_SPLICE	METTL27^ENSG00000165171.11	chr7:73840031:-	ISG20^ENSG00000172183.16	chr15:88646956:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:11800:20659	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:73840031-chr15:88646956	False			0	Read count too low: 1 < 8	FAIL	1
METTL27--ANGPT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	METTL27^ENSG00000165171.11	chr7:73842018:-	ANGPT2^ENSG00000091879.14	chr8:6508337:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:20351:21486	.	NO_LDAS	0.0034	GT	1.8062	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:73842018-chr8:6508337	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MESD--TBX5-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MESD^ENSG00000117899.11	chr15:80948780:-	TBX5-AS1^ENSG00000255399.4	chr12:114412446:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:6234:28002	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr12]""]"	chr15:80948780-chr12:114412446	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MERTK--EEF1E1P1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MERTK^ENSG00000153208.17	chr2:111929540:+	EEF1E1P1^ENSG00000236307.2	chr2:111887898:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2347:5361:17492	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9866]""]"	chr2:111929540-chr2:111887898	False			0	Read count too low: 1 < 8	FAIL	1
MEMO1--SPAST	1	0	1.0	0.0	ONLY_REF_SPLICE	MEMO1^ENSG00000162959.14	chr2:32010187:-	SPAST^ENSG00000021574.13	chr2:32114638:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2108:22236:15251	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTRACHROMOSOMAL[chr2:0.05Mb]"",""LOCAL_INVERSION:-:+:[52326]""]"	chr2:32010187-chr2:32114638	False			0	Read count too low: 1 < 8	FAIL	1
MEIOSIN--AP004550.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MEIOSIN^ENSG00000237452.3	chr19:45762129:+	AP004550.1^ENSG00000254573.1	chr11:134572906:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2134:13580:20911	.	NO_LDAS	0.0034	GT	1.6402	AG	1.5546	"[""INTERCHROMOSOMAL[chr19--chr11]""]"	chr19:45762129-chr11:134572906	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MEF2C--FBXW11	1	0	1.0	0.0	ONLY_REF_SPLICE	MEF2C^ENSG00000081189.16	chr5:88804598:-	FBXW11^ENSG00000072803.18	chr5:171910797:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:35205:24008	.	YES_LDAS	0.0034	GT	1.9656	AG	1.6729	"[""INTRACHROMOSOMAL[chr5:82.96Mb]""]"	chr5:88804598-chr5:171910797	False			0	Read count too low: 1 < 8	FAIL	1
MED31--SUPT3H	1	0	1.0	0.0	ONLY_REF_SPLICE	MED31^ENSG00000108590.11	chr17:6650356:-	SUPT3H^ENSG00000196284.17	chr6:45322967:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2348:24793:26376	.	YES_LDAS	0.0034	GT	1.5219	AG	1.7819	"[""INTERCHROMOSOMAL[chr17--chr6]""]"	chr17:6650356-chr6:45322967	False			0	Read count too low: 1 < 8	FAIL	1
MED27--RALGPS1	1	0	1.0	0.0	ONLY_REF_SPLICE	MED27^ENSG00000160563.14	chr9:132077442:-	RALGPS1^ENSG00000136828.19	chr9:127034431:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2467:9478:7390	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9899	"[""INTRACHROMOSOMAL[chr9:4.63Mb]""]"	chr9:132077442-chr9:127034431	False			0	Read count too low: 1 < 8	FAIL	1
MED27--DNAJC25	1	0	1.0	0.0	ONLY_REF_SPLICE	MED27^ENSG00000160563.14	chr9:131939381:-	DNAJC25^ENSG00000059769.20	chr9:111642857:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1133:25068:24835	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr9:20.20Mb]""]"	chr9:131939381-chr9:111642857	False			0	Read count too low: 1 < 8	FAIL	1
MED14--OFD1	1	0	0.5	0.0	ONLY_REF_SPLICE	MED14^ENSG00000180182.11	chrX:40726746:-	OFD1^ENSG00000046651.15	chrX:13749427:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1407:3095:4517	.	YES_LDAS	0.0017	GT	1.7819	AG	1.4256	"[""INTRACHROMOSOMAL[chrX:26.88Mb]""]"	chrX:40726746-chrX:13749427	False			0	Read count too low: 1 < 8	FAIL	1
MED12L--SEC62	1	0	1.0	0.0	ONLY_REF_SPLICE	MED12L^ENSG00000144893.12	chr3:151190931:+	SEC62^ENSG00000008952.17	chr3:169975608:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:20643:13891	.	NO_LDAS	0.0034	GT	1.5219	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:18.53Mb]""]"	chr3:151190931-chr3:169975608	False			0	Read count too low: 1 < 8	FAIL	1
MED10--EPB41L4A-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MED10^ENSG00000133398.4	chr5:6372413:-	EPB41L4A-AS1^ENSG00000224032.7	chr5:112161249:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1363:20545:20281	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTRACHROMOSOMAL[chr5:105.78Mb]""]"	chr5:6372413-chr5:112161249	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MECR--C8orf44	1	0	1.0	0.0	ONLY_REF_SPLICE	MECR^ENSG00000116353.16	chr1:29216005:-	C8orf44^ENSG00000288596.2	chr8:66679721:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1460:32972:19889	.	YES_LDAS	0.0034	GT	1.9329	AG	1.3996	"[""INTERCHROMOSOMAL[chr1--chr8]""]"	chr1:29216005-chr8:66679721	False			0	Read count too low: 1 < 8	FAIL	1
MEAF6--WFIKKN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MEAF6^ENSG00000163875.16	chr1:37494088:-	WFIKKN1^ENSG00000127578.7	chr16:633116:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1209:26864:9590	.	NO_LDAS	0.0034	GT	1.7968	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:37494088-chr16:633116	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ME1--SNAP91	1	0	1.0	0.0	ONLY_REF_SPLICE	ME1^ENSG00000065833.9	chr6:83346173:-	SNAP91^ENSG00000065609.14	chr6:83560947:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2225:35431:2934	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9899	"[""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr6:0.12Mb]""]"	chr6:83346173-chr6:83560947	False			0	Read count too low: 1 < 8	FAIL	1
ME1--IL17RC	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ME1^ENSG00000065833.9	chr6:83239539:-	IL17RC^ENSG00000163702.20	chr3:9920518:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:33643:14522	.	NO_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:83239539-chr3:9920518	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MDFIC--WLS	1	0	1.0	0.0	ONLY_REF_SPLICE	MDFIC^ENSG00000135272.12	chr7:114923127:+	WLS^ENSG00000116729.14	chr1:68159247:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2355:13701:21542	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5329	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:114923127-chr1:68159247	False			0	Read count too low: 1 < 8	FAIL	1
MCUB--C5orf64	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MCUB^ENSG00000005059.16	chr4:109560436:+	C5orf64^ENSG00000178722.13	chr5:61757477:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2480:36289:8427	.	NO_LDAS	0.0034	GT	1.3753	AG	1.5329	"[""INTERCHROMOSOMAL[chr4--chr5]""]"	chr4:109560436-chr5:61757477	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MCU--SIL1	1	0	1.0	0.0	ONLY_REF_SPLICE	MCU^ENSG00000156026.14	chr10:72692301:+	SIL1^ENSG00000120725.13	chr5:139051046:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1285:12399:17492	.	YES_LDAS	0.0034	GT	1.5301	AG	1.7819	"[""INTERCHROMOSOMAL[chr10--chr5]""]"	chr10:72692301-chr5:139051046	False			0	Read count too low: 1 < 8	FAIL	1
MCPH1--RPS10P7	1	0	1.0	0.0	ONLY_REF_SPLICE	MCPH1^ENSG00000147316.13	chr8:6414883:+	RPS10P7^ENSG00000223396.4	chr1:201530094:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:37049:5876	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6729	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:6414883-chr1:201530094	False			0	Read count too low: 1 < 8	FAIL	1
MCMDC2--SGK3	1	0	1.0	0.0	ONLY_REF_SPLICE	MCMDC2^ENSG00000178460.18	chr8:66874586:+	SGK3^ENSG00000104205.16	chr8:66841024:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1133:3168:8483	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8727]""]"	chr8:66874586-chr8:66841024	False			0	Read count too low: 1 < 8	FAIL	1
MCM9--CEP85L	1	0	1.0	0.0	ONLY_REF_SPLICE	MCM9^ENSG00000111877.18	chr6:118826782:-	CEP85L^ENSG00000111860.14	chr6:118632611:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:19680:10374	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""INTRACHROMOSOMAL[chr6:0.10Mb]""]"	chr6:118826782-chr6:118632611	False			0	Read count too low: 1 < 8	FAIL	1
MCM9--CEP85L	1	0	1.0	0.0	ONLY_REF_SPLICE	MCM9^ENSG00000111877.18	chr6:118826147:-	CEP85L^ENSG00000111860.14	chr6:118664521:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:29372:2415	.	YES_LDAS	0.0034	GT	1.7465	AG	1.6895	"[""INTRACHROMOSOMAL[chr6:0.10Mb]""]"	chr6:118826147-chr6:118664521	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MCM9--CEP85L	1	0	1.0	0.0	ONLY_REF_SPLICE	MCM9^ENSG00000111877.18	chr6:118826147:-	CEP85L^ENSG00000111860.14	chr6:118652808:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:6081:22103	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr6:0.10Mb]""]"	chr6:118826147-chr6:118652808	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
MCM9--CEP85L	1	0	1.0	0.0	ONLY_REF_SPLICE	MCM9^ENSG00000111877.18	chr6:118826147:-	CEP85L^ENSG00000111860.14	chr6:118632611:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1170:11663:15433	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chr6:0.10Mb]""]"	chr6:118826147-chr6:118632611	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MCF2L2--PARP9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MCF2L2^ENSG00000053524.12	chr3:183298504:-	PARP9^ENSG00000138496.16	chr3:122552612:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1151:9664:20519	.	NO_LDAS	0.0034	AT	1.5628	AC	1.8062	"[""INTRACHROMOSOMAL[chr3:60.61Mb]""]"	chr3:183298504-chr3:122552612	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MBTPS2--GK5	1	0	1.0	0.0	ONLY_REF_SPLICE	MBTPS2^ENSG00000012174.12	chrX:21853503:+	GK5^ENSG00000175066.16	chr3:142213601:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:42380:1126	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr3]""]"	chrX:21853503-chr3:142213601	False			0	Read count too low: 1 < 8	FAIL	1
MARK1--AL390957.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MARK1^ENSG00000116141.17	chr1:220528873:+	AL390957.1^ENSG00000285280.2	chr1:192957422:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1289:30884:22803	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:27.57Mb]""]"	chr1:220528873-chr1:192957422	False			0	Read count too low: 1 < 8	FAIL	1
MARCHF9--LINC00562	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MARCHF9^ENSG00000139266.6	chr12:57757084:+	LINC00562^ENSG00000260388.2	chr13:47930590:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2301:49257:20435	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr13]""]"	chr12:57757084-chr13:47930590	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MARCHF3--C5orf63	1	0	1.0	0.0	ONLY_REF_SPLICE	MARCHF3^ENSG00000173926.6	chr5:126914930:-	C5orf63^ENSG00000164241.13	chr5:127047915:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1471:43861:3242	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8323	"[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[12000]""]"	chr5:126914930-chr5:127047915	False			0	Read count too low: 1 < 8	FAIL	1
MAPK8--PARG	1	0	0.5	0.0	ONLY_REF_SPLICE	MAPK8^ENSG00000107643.16	chr10:48306821:+	PARG^ENSG00000227345.9	chr10:49922419:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1108:38368:8749	.	YES_LDAS	0.0017	GT	1.5219	AG	1.9086	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr10:1.38Mb]""]"	chr10:48306821-chr10:49922419	False			0	Read count too low: 1 < 8	FAIL	1
MAP4K5--RSPH4A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MAP4K5^ENSG00000012983.11	chr14:50440013:-	RSPH4A^ENSG00000111834.13	chr6:116617060:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2435:31604:23518	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:50440013-chr6:116617060	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MAP4K5--PSMG4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MAP4K5^ENSG00000012983.11	chr14:50440013:-	PSMG4^ENSG00000180822.12	chr6:3291447:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2393:48585:21710	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9219	"[""INTERCHROMOSOMAL[chr14--chr6]""]"	chr14:50440013-chr6:3291447	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MAP3K7--RNGTT	1	0	1.0	0.0	ONLY_REF_SPLICE	MAP3K7^ENSG00000135341.18	chr6:90586764:-	RNGTT^ENSG00000111880.16	chr6:88853764:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2139:25990:17969	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8062	"[""INTRACHROMOSOMAL[chr6:1.55Mb]""]"	chr6:90586764-chr6:88853764	False			0	Read count too low: 1 < 8	FAIL	1
MAP3K7--OSBPL11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MAP3K7^ENSG00000135341.18	chr6:90561622:-	OSBPL11^ENSG00000144909.8	chr3:125530121:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1190:40884:15825	.	NO_LDAS	0.0034	GT	1.7968	AG	1.1033	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:90561622-chr3:125530121	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MAP3K12--FAM155A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MAP3K12^ENSG00000139625.13	chr12:53483937:-	FAM155A^ENSG00000204442.4	chr13:107867136:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1309:8572:5820	.	NO_LDAS	0.0034	GT	1.8323	AG	0.8366	"[""INTERCHROMOSOMAL[chr12--chr13]""]"	chr12:53483937-chr13:107867136	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
MAP2K5--SKOR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	MAP2K5^ENSG00000137764.20	chr15:67806981:+	SKOR1^ENSG00000188779.12	chr15:67825936:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1105:50907:29571	.	YES_LDAS	0.0034	GT	1.7819	AG	1.6729	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr15:0.01Mb]"",""NEIGHBORS[12587]""]"	chr15:67806981-chr15:67825936	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
MANBAL--TXLNG	1	0	1.0	0.0	ONLY_REF_SPLICE	MANBAL^ENSG00000101363.12	chr20:37301413:+	TXLNG^ENSG00000086712.13	chrX:16818574:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1469:35698:20183	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9086	"[""INTERCHROMOSOMAL[chr20--chrX]""]"	chr20:37301413-chrX:16818574	False			0	Read count too low: 1 < 8	FAIL	1
MAMSTR--MKKS	1	0	1.0	0.0	ONLY_REF_SPLICE	MAMSTR^ENSG00000176909.12	chr19:48713860:-	MKKS^ENSG00000125863.20	chr20:10428816:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2118:12569:4755	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8295	"[""INTERCHROMOSOMAL[chr19--chr20]""]"	chr19:48713860-chr20:10428816	False			0	Read count too low: 1 < 8	FAIL	1
MAD2L1BP--PTPRA	1	0	1.0	0.0	ONLY_REF_SPLICE	MAD2L1BP^ENSG00000124688.14	chr6:43633315:+	PTPRA^ENSG00000132670.20	chr20:2964272:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:44379:20813	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr20]""]"	chr6:43633315-chr20:2964272	False			0	Read count too low: 1 < 8	FAIL	1
MACROH2A2--SAR1A	1	0	1.0	0.0	ONLY_REF_SPLICE	MACROH2A2^ENSG00000099284.15	chr10:70075830:+	SAR1A^ENSG00000079332.15	chr10:70161069:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2315:40779:17829	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTRACHROMOSOMAL[chr10:0.04Mb]"",""LOCAL_INVERSION:+:-:[35007]""]"	chr10:70075830-chr10:70161069	False			0	Read count too low: 1 < 8	FAIL	1
MACROD2--AC066613.1	1	0	1.0	0.0	ONLY_REF_SPLICE	MACROD2^ENSG00000172264.17	chr20:14002404:+	AC066613.1^ENSG00000259668.6	chr15:51458720:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1458:27851:16568	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr20--chr15]""]"	chr20:14002404-chr15:51458720	False			0	Read count too low: 1 < 8	FAIL	1
LZIC--SLIT3-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LZIC^ENSG00000162441.12	chr1:9932858:-	SLIT3-AS1^ENSG00000248222.5	chr5:169026433:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1392:49491:16301	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:9932858-chr5:169026433	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LYRM7--CDC42SE2	1	0	1.0	0.0	ONLY_REF_SPLICE	LYRM7^ENSG00000186687.16	chr5:131171038:+	CDC42SE2^ENSG00000158985.14	chr5:131315976:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2314:46547:14676	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[40065]""]"	chr5:131171038-chr5:131315976	False			0	Read count too low: 1 < 8	FAIL	1
LYRM2--CYB5R4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LYRM2^ENSG00000083099.11	chr6:89637674:-	CYB5R4^ENSG00000065615.14	chr6:83963596:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1160:19194:1883	.	NO_LDAS	0.0034	GT	0.8366	AG	1.9329	"[""INTRACHROMOSOMAL[chr6:5.60Mb]""]"	chr6:89637674-chr6:83963596	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LYPLA2--H3-2	1	0	0.2	0.0	INCL_NON_REF_SPLICE	LYPLA2^ENSG00000011009.11	chr1:23794530:+	H3-2^ENSG00000273213.3	chr1:143905936:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2483:10959:29403	.	YES_LDAS	0.0007	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:120.10Mb]""]"	chr1:23794530-chr1:143905936	False			0	Read count too low: 1 < 8	FAIL	1
LYPLA1--STAU2	1	0	1.0	0.0	ONLY_REF_SPLICE	LYPLA1^ENSG00000120992.18	chr8:54100908:-	STAU2^ENSG00000040341.18	chr8:73422702:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2445:40795:2555	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:19.32Mb]""]"	chr8:54100908-chr8:73422702	False			0	Read count too low: 1 < 8	FAIL	1
LYPLA1--RGS20	1	0	1.0	0.0	ONLY_REF_SPLICE	LYPLA1^ENSG00000120992.18	chr8:54062254:-	RGS20^ENSG00000147509.14	chr8:53913497:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1112:23854:1799	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9329	"[""INTRACHROMOSOMAL[chr8:0.09Mb]"",""LOCAL_INVERSION:-:+:[87064]""]"	chr8:54062254-chr8:53913497	False			0	Read count too low: 1 < 8	FAIL	1
LYPLA1--CHMP4C	1	0	1.0	0.0	ONLY_REF_SPLICE	LYPLA1^ENSG00000120992.18	chr8:54100908:-	CHMP4C^ENSG00000164695.5	chr8:81758142:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:40576:24709	.	YES_LDAS	0.0034	GT	1.8062	AG	1.8062	"[""INTRACHROMOSOMAL[chr8:27.63Mb]""]"	chr8:54100908-chr8:81758142	False			0	Read count too low: 1 < 8	FAIL	1
LYAR--AK9	1	0	0.2	0.0	INCL_NON_REF_SPLICE	LYAR^ENSG00000145220.14	chr4:4274421:-	AK9^ENSG00000155085.15	chr6:109659256:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1272:11064:9323	.	YES_LDAS	0.0007	GT	1.585	AG	1.2729	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:4274421-chr6:109659256	False			0	Read count too low: 1 < 8	FAIL	1
LUCAT1--SNRK	1	0	1.0	0.0	ONLY_REF_SPLICE	LUCAT1^ENSG00000248323.7	chr5:91207633:-	SNRK^ENSG00000163788.14	chr3:43332169:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2410:27131:18768	.	YES_LDAS	0.0034	GT	1.2729	AG	1.7819	"[""INTERCHROMOSOMAL[chr5--chr3]""]"	chr5:91207633-chr3:43332169	False			0	Read count too low: 1 < 8	FAIL	1
LSM7--KPTN	1	0	1.0	0.0	ONLY_REF_SPLICE	LSM7^ENSG00000130332.15	chr19:2328387:-	KPTN^ENSG00000118162.14	chr19:47475544:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2471:24202:14031	.	YES_LDAS	0.0034	GT	1.4566	AG	1.9656	"[""INTRACHROMOSOMAL[chr19:45.15Mb]""]"	chr19:2328387-chr19:47475544	False			0	Read count too low: 1 < 8	FAIL	1
LSM5--HDGFL3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LSM5^ENSG00000106355.10	chr7:32488628:-	HDGFL3^ENSG00000166503.9	chr15:83132831:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:2642:14101	.	NO_LDAS	0.0034	GT	1.9086	AG	1.6895	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:32488628-chr15:83132831	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC75B--SAR1A	1	0	1.0	0.0	ONLY_REF_SPLICE	LRRC75B^ENSG00000178026.13	chr22:24588214:-	SAR1A^ENSG00000079332.15	chr10:70152592:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:48804:20183	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9219	"[""INTERCHROMOSOMAL[chr22--chr10]""]"	chr22:24588214-chr10:70152592	False			0	Read count too low: 1 < 8	FAIL	1
LRRC75B--FPR2	1	0	1.0	0.0	ONLY_REF_SPLICE	LRRC75B^ENSG00000178026.13	chr22:24588214:-	FPR2^ENSG00000171049.9	chr19:51762417:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:16848:25760	.	NO_LDAS	0.0034	GT	1.8256	AG	1.5546	"[""INTERCHROMOSOMAL[chr22--chr19]""]"	chr22:24588214-chr19:51762417	False			0	Read count too low: 1 < 8	FAIL	1
LRRC45--TGM6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LRRC45^ENSG00000169683.8	chr17:82024763:+	TGM6^ENSG00000166948.10	chr20:2394561:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:41401:22411	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr20]""]"	chr17:82024763-chr20:2394561	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC37B--AC006441.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LRRC37B^ENSG00000185158.12	chr17:32018004:+	AC006441.5^ENSG00000277426.1	chr17:39026691:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1331:41037:26264	.	NO_LDAS	0.0034	GT	1.9329	AG	1.5656	"[""INTRACHROMOSOMAL[chr17:6.97Mb]""]"	chr17:32018004-chr17:39026691	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC37A9P--RDM1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LRRC37A9P^ENSG00000271013.1	chr17:35917512:-	RDM1^ENSG00000278023.7	chr17:35930255:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2230:3880:28912	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[56]""]"	chr17:35917512-chr17:35930255	False			0	Read count too low: 1 < 8	FAIL	1
LRRC37A--PI4KB	1	0	0.33	0.0	INCL_NON_REF_SPLICE	LRRC37A^ENSG00000176681.14	chr17:46331716:+	PI4KB^ENSG00000143393.16	chr1:151298872:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1150:1251:23798	.	NO_LDAS	0.0011	GC	1.8323	AG	1.9656	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:46331716-chr1:151298872	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC37A--NSF	1	0	0.1	0.0	ONLY_REF_SPLICE	LRRC37A^ENSG00000176681.14	chr17:46302709:+	NSF^ENSG00000073969.18	chr17:46692903:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1493:1413:8441	.	YES_LDAS	0.0003	GT	1.7819	AG	1.9656	"[""INTRACHROMOSOMAL[chr17:0.25Mb]""]"	chr17:46302709-chr17:46692903	False			0	Read count too low: 1 < 8	FAIL	1
LRRC23--INTU	1	0	0.5	0.0	INCL_NON_REF_SPLICE	LRRC23^ENSG00000010626.15	chr12:6907445:+	INTU^ENSG00000164066.13	chr4:127632959:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1423:39565:7067	.	NO_LDAS	0.0017	GT	1.9086	AG	1.8062	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:6907445-chr4:127632959	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC10B--ZCCHC3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LRRC10B^ENSG00000204950.4	chr11:61508816:+	ZCCHC3^ENSG00000247315.4	chr20:298046:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2483:21832:11243	.	NO_LDAS	0.0034	GT	0.971	AG	1.2729	"[""INTERCHROMOSOMAL[chr11--chr20]""]"	chr11:61508816-chr20:298046	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LRRC1--FAM83B	1	0	1.0	0.0	ONLY_REF_SPLICE	LRRC1^ENSG00000137269.15	chr6:53795415:+	FAM83B^ENSG00000168143.9	chr6:54870187:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2277:38206:12952	.	YES_LDAS	0.0034	GT	1.7056	AG	1.5656	"[""INTRACHROMOSOMAL[chr6:0.92Mb]""]"	chr6:53795415-chr6:54870187	False			0	Read count too low: 1 < 8	FAIL	1
LRR1--BRCA1	1	0	1.0	0.0	ONLY_REF_SPLICE	LRR1^ENSG00000165501.17	chr14:49602468:+	BRCA1^ENSG00000012048.23	chr17:43045802:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1138:26734:17605	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr17]""]"	chr14:49602468-chr17:43045802	False			0	Read count too low: 1 < 8	FAIL	1
LRMDA--TMEM254	1	0	1.0	0.0	ONLY_REF_SPLICE	LRMDA^ENSG00000148655.15	chr10:75438494:+	TMEM254^ENSG00000133678.14	chr10:80081841:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2341:30407:7404	.	YES_LDAS	0.0034	GT	1.8892	AG	1.4295	"[""INTRACHROMOSOMAL[chr10:3.52Mb]""]"	chr10:75438494-chr10:80081841	False			0	Read count too low: 1 < 8	FAIL	1
LRMDA--PSMG3	1	0	1.0	0.0	ONLY_REF_SPLICE	LRMDA^ENSG00000148655.15	chr10:76058783:+	PSMG3^ENSG00000157778.9	chr7:1569360:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1167:51328:24415	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:76058783-chr7:1569360	False			0	Read count too low: 1 < 8	FAIL	1
LRCH1--SPRY2	1	0	1.0	0.0	ONLY_REF_SPLICE	LRCH1^ENSG00000136141.15	chr13:46553703:+	SPRY2^ENSG00000136158.12	chr13:80337756:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1325:33053:11341	.	YES_LDAS	0.0034	GT	1.8062	AG	1.7819	"[""INTRACHROMOSOMAL[chr13:33.58Mb]""]"	chr13:46553703-chr13:80337756	False			0	Read count too low: 1 < 8	FAIL	1
LRAT--RBM46	1	0	1.0	0.0	ONLY_REF_SPLICE	LRAT^ENSG00000121207.12	chr4:154744866:+	RBM46^ENSG00000151962.8	chr4:154796742:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1404:6380:27217	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTRACHROMOSOMAL[chr4:0.03Mb]"",""NEIGHBORS[28093]""]"	chr4:154744866-chr4:154796742	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LMO7--UCHL3	1	0	1.0	0.0	ONLY_REF_SPLICE	LMO7^ENSG00000136153.20	chr13:75623320:+	UCHL3^ENSG00000118939.18	chr13:75594915:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2304:5085:14634	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""Klijn_CellLines"",""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr13:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14414]""]"	chr13:75623320-chr13:75594915	False			0	Read count too low: 1 < 8	FAIL	1
LMBRD1--PAK1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LMBRD1^ENSG00000168216.13	chr6:69737942:-	PAK1^ENSG00000149269.10	chr11:77474669:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:31985:4139	.	YES_LDAS	0.0034	GT	1.8062	AG	1.2366	"[""INTERCHROMOSOMAL[chr6--chr11]""]"	chr6:69737942-chr11:77474669	False			0	Read count too low: 1 < 8	FAIL	1
LLPH--SNRPA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LLPH^ENSG00000139233.7	chr12:66130705:-	SNRPA1^ENSG00000131876.17	chr15:101285790:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2229:19639:12014	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr15]""]"	chr12:66130705-chr15:101285790	False			0	Read count too low: 1 < 8	FAIL	1
LIPH--LNP1	1	0	1.0	0.0	ONLY_REF_SPLICE	LIPH^ENSG00000163898.10	chr3:185552423:-	LNP1^ENSG00000206535.8	chr3:100429697:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:37397:10150	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9656	"[""INTRACHROMOSOMAL[chr3:85.05Mb]""]"	chr3:185552423-chr3:100429697	False			0	Read count too low: 1 < 8	FAIL	1
LINS1--ST8SIA1	1	0	0.5	0.0	ONLY_REF_SPLICE	LINS1^ENSG00000140471.17	chr15:100580263:-	ST8SIA1^ENSG00000111728.11	chr12:22150234:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269	.	NO_LDAS	0.0017	GT	1.6402	AG	1.7819	"[""INTERCHROMOSOMAL[chr15--chr12]""]"	chr15:100580263-chr12:22150234	False			0	Read count too low: 1 < 8	FAIL	1
LINS1--AL589740.1	1	0	0.5	0.0	ONLY_REF_SPLICE	LINS1^ENSG00000140471.17	chr15:100580263:-	AL589740.1^ENSG00000271860.7	chr6:97612168:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2110:20319:25269	.	NO_LDAS	0.0017	GT	1.6402	AG	1.7819	"[""INTERCHROMOSOMAL[chr15--chr6]""]"	chr15:100580263-chr6:97612168	False			0	Read count too low: 1 < 8	FAIL	1
LINC02882--CD83	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02882^ENSG00000251138.7	chr12:74157790:-	CD83^ENSG00000112149.10	chr6:14117950:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2190:29517:15867	.	YES_LDAS	0.0034	GT	1.7232	AG	1.8295	"[""INTERCHROMOSOMAL[chr12--chr6]""]"	chr12:74157790-chr6:14117950	False			0	Read count too low: 1 < 8	FAIL	1
LINC02680--CCDC7	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02680^ENSG00000285737.1	chr10:27578713:+	CCDC7^ENSG00000216937.13	chr10:32565558:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:5992:25227	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr10:4.85Mb]""]"	chr10:27578713-chr10:32565558	False			0	Read count too low: 1 < 8	FAIL	1
LINC02643--NEBL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC02643^ENSG00000230109.1	chr10:21340142:-	NEBL^ENSG00000078114.19	chr10:21020201:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1338:6275:7193	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7056	"[""INTRACHROMOSOMAL[chr10:0.05Mb]"",""NEIGHBORS[47222]""]"	chr10:21340142-chr10:21020201	False			0	Read count too low: 1 < 8	FAIL	1
LINC02609--ZNF644	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02609^ENSG00000233593.10	chr1:90831930:-	ZNF644^ENSG00000122482.21	chr1:90918154:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1315:23248:17647	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.06Mb]"",""LOCAL_REARRANGEMENT:-:[63640]""]"	chr1:90831930-chr1:90918154	False			0	Read count too low: 1 < 8	FAIL	1
LINC02340--USP12	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02340^ENSG00000275294.4	chr13:27186506:-	USP12^ENSG00000152484.14	chr13:27116596:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2320:5417:2794	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTRACHROMOSOMAL[chr13:0.01Mb]"",""NEIGHBORS[6452]""]"	chr13:27186506-chr13:27116596	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LINC02210--CRHR1	1	0	0.5	0.0	ONLY_REF_SPLICE	LINC02210^ENSG00000204650.14	chr17:45622041:+	CRHR1^ENSG00000120088.15	chr17:45807010:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2468:41571:10963	.	NO_LDAS	0.0017	GT	1.9656	AG	1.4295	"[""INTRACHROMOSOMAL[chr17:0.13Mb]""]"	chr17:45622041-chr17:45807010	False			0	Read count too low: 1 < 8	FAIL	1
LINC02043--GRAMD1C	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02043^ENSG00000232233.1	chr3:186823545:-	GRAMD1C^ENSG00000178075.20	chr3:113901031:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1315:19817:1392	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:72.86Mb]""]"	chr3:186823545-chr3:113901031	False			0	Read count too low: 1 < 8	FAIL	1
LINC02008--FBXL20	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC02008^ENSG00000239440.6	chr3:82185453:+	FBXL20^ENSG00000108306.13	chr17:39343241:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1415:20311:20939	.	YES_LDAS	0.0034	GT	1.6729	AG	1.8323	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:82185453-chr17:39343241	False			0	Read count too low: 1 < 8	FAIL	1
LINC01968--COX10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC01968^ENSG00000237222.4	chr3:194768472:+	COX10^ENSG00000006695.12	chr17:14191989:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2276:49483:29627	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:194768472-chr17:14191989	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC01876--GPD2	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01876^ENSG00000226383.7	chr2:156254778:-	GPD2^ENSG00000115159.16	chr2:156476098:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1282:29477:14592	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.18Mb]""]"	chr2:156254778-chr2:156476098	False			0	Read count too low: 1 < 8	FAIL	1
LINC01778--ATL3	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01778^ENSG00000223382.5	chr1:30826652:+	ATL3^ENSG00000184743.13	chr11:63636334:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2142:29695:9085	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8062	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:30826652-chr11:63636334	False			0	Read count too low: 1 < 8	FAIL	1
LINC01721--RAB28	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01721^ENSG00000230133.2	chr20:24219702:+	RAB28^ENSG00000157869.16	chr4:13479526:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:7221:23798	.	YES_LDAS	0.0034	GT	1.5329	AG	1.8062	"[""INTERCHROMOSOMAL[chr20--chr4]""]"	chr20:24219702-chr4:13479526	False			0	Read count too low: 1 < 8	FAIL	1
LINC01711--TMEM231	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC01711^ENSG00000268941.2	chr20:58635441:+	TMEM231^ENSG00000205084.11	chr16:75555951:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2245:30075:16414	.	YES_LDAS	0.0034	GC	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr20--chr16]""]"	chr20:58635441-chr16:75555951	False			0	Read count too low: 1 < 8	FAIL	1
LINC01696--TMEM106C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC01696^ENSG00000227940.2	chr1:209327275:+	TMEM106C^ENSG00000134291.12	chr12:47967208:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:7068:17058	.	NO_LDAS	0.0034	GT	1.5546	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:209327275-chr12:47967208	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC01666--PSMD14	1	0	0.33	0.0	INCL_NON_REF_SPLICE	LINC01666^ENSG00000279579.3	chr21:8761334:+	PSMD14^ENSG00000115233.12	chr2:161367478:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:21152:12616	.	YES_LDAS	0.0011	GT	1.7968	AG	1.9329	"[""INTERCHROMOSOMAL[chr21--chr2]""]"	chr21:8761334-chr2:161367478	False			0	Read count too low: 1 < 8	FAIL	1
LINC01572--C16orf46	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01572^ENSG00000261008.7	chr16:72664892:-	C16orf46^ENSG00000166455.14	chr16:81062138:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:37138:12168	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7232	"[""INTRACHROMOSOMAL[chr16:8.39Mb]""]"	chr16:72664892-chr16:81062138	False			0	Read count too low: 1 < 8	FAIL	1
LINC01515--OCIAD2	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01515^ENSG00000228065.11	chr10:65615761:+	OCIAD2^ENSG00000145247.12	chr4:48892889:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1426:5935:6661	.	YES_LDAS	0.0034	GT	1.9086	AG	1.5058	"[""INTERCHROMOSOMAL[chr10--chr4]""]"	chr10:65615761-chr4:48892889	False			0	Read count too low: 1 < 8	FAIL	1
LINC01505--AL138778.1	1	0	0.5	0.0	ONLY_REF_SPLICE	LINC01505^ENSG00000234323.8	chr9:106500505:+	AL138778.1^ENSG00000286285.1	chr1:193457641:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:49548:1406	.	YES_LDAS	0.0017	GT	1.5329	AG	1.6402	"[""INTERCHROMOSOMAL[chr9--chr1]""]"	chr9:106500505-chr1:193457641	False			0	Read count too low: 1 < 8	FAIL	1
LINC01492--UBE2E2	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01492^ENSG00000225564.6	chr9:103188046:-	UBE2E2^ENSG00000182247.10	chr3:23499608:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1194:13467:27721	.	NO_LDAS	0.0034	GT	1.6402	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr3]""]"	chr9:103188046-chr3:23499608	False			0	Read count too low: 1 < 8	FAIL	1
LINC01473--SCOC	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01473^ENSG00000237877.7	chr2:186178599:-	SCOC^ENSG00000153130.18	chr4:140379121:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1383:31758:19833	.	YES_LDAS	0.0034	GT	1.9899	AG	1.7819	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:186178599-chr4:140379121	False			0	Read count too low: 1 < 8	FAIL	1
LINC01470--INVS	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01470^ENSG00000249484.9	chr5:152623231:-	INVS^ENSG00000119509.13	chr9:100104498:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1467:42210:8398	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chr5--chr9]""]"	chr5:152623231-chr9:100104498	False			0	Read count too low: 1 < 8	FAIL	1
LINC01376--LDAH	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC01376^ENSG00000236204.6	chr2:19125252:-	LDAH^ENSG00000118961.15	chr2:20790398:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:45713:2219	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr2:1.34Mb]""]"	chr2:19125252-chr2:20790398	False			0	Read count too low: 1 < 8	FAIL	1
LINC01145--SRGAP2B	1	0	0.33	0.0	ONLY_REF_SPLICE	LINC01145^ENSG00000272419.6	chr1:145214677:-	SRGAP2B^ENSG00000196369.11	chr1:144995200:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:39371:20827	.	YES_LDAS	0.0011	GT	1.7819	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""NEIGHBORS[68571]""]"	chr1:145214677-chr1:144995200	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LINC01106--ZNF800	1	0	0.5	0.0	INCL_NON_REF_SPLICE	LINC01106^ENSG00000175772.11	chr2:110384315:-	ZNF800^ENSG00000048405.10	chr7:127373479:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2418:42194:5036	.	YES_LDAS	0.0017	GC	1.9086	AG	1.8062	"[""INTERCHROMOSOMAL[chr2--chr7]""]"	chr2:110384315-chr7:127373479	False			0	Read count too low: 1 < 8	FAIL	1
LINC01031--AL138778.1	1	0	0.5	0.0	ONLY_REF_SPLICE	LINC01031^ENSG00000232077.2	chr1:193304938:+	AL138778.1^ENSG00000286285.1	chr1:193457641:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1405:49548:1406	.	YES_LDAS	0.0017	GT	1.5329	AG	1.6402	"[""INTRACHROMOSOMAL[chr1:0.09Mb]"",""NEIGHBORS[91469]""]"	chr1:193304938-chr1:193457641	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LINC00987--PALB2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC00987^ENSG00000237248.5	chr12:9240293:+	PALB2^ENSG00000083093.10	chr16:23635267:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2193:10304:29137	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr12--chr16]""]"	chr12:9240293-chr16:23635267	False			0	Read count too low: 1 < 8	FAIL	1
LINC00896--POFUT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC00896^ENSG00000236499.2	chr22:20206464:+	POFUT2^ENSG00000186866.17	chr21:45277142:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1281:43772:16203	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr22--chr21]""]"	chr22:20206464-chr21:45277142	False			0	Read count too low: 1 < 8	FAIL	1
LINC00894--HSFX3	1	0	0.5	0.0	ONLY_REF_SPLICE	LINC00894^ENSG00000235703.6	chrX:149960948:+	HSFX3^ENSG00000283697.3	chrX:149548910:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2392:19955:7151	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8062	"[""INTRACHROMOSOMAL[chrX:0.39Mb]""]"	chrX:149960948-chrX:149548910	False			0	Read count too low: 1 < 8	FAIL	1
LINC00882--MED14	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC00882^ENSG00000242759.8	chr3:107114753:-	MED14^ENSG00000180182.11	chrX:40729345:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1232:9155:20589	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr3--chrX]""]"	chr3:107114753-chrX:40729345	False			0	Read count too low: 1 < 8	FAIL	1
LINC00707--GNA14	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC00707^ENSG00000238266.2	chr10:6789681:+	GNA14^ENSG00000156049.7	chr9:77431531:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:23903:22761	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:6789681-chr9:77431531	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC00552--TMEM43	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC00552^ENSG00000279770.1	chr13:113750025:-	TMEM43^ENSG00000170876.8	chr3:14129412:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2266:32591:10150	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr13--chr3]""]"	chr13:113750025-chr3:14129412	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC00115--AC240565.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	LINC00115^ENSG00000225880.5	chr1:827484:-	AC240565.1^ENSG00000280136.2	chr17:106864:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:9891:9029	.	YES_LDAS	0.0008	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:827484-chr17:106864	False			0	Read count too low: 1 < 8	FAIL	1
LINC-PINT--TSPAN9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LINC-PINT^ENSG00000231721.7	chr7:130941413:-	TSPAN9^ENSG00000011105.14	chr12:3201177:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:32527:15419	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr7--chr12]""]"	chr7:130941413-chr12:3201177	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LINC-PINT--SUPT3H	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC-PINT^ENSG00000231721.7	chr7:130945720:-	SUPT3H^ENSG00000196284.17	chr6:45365301:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2101:26378:10963	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:130945720-chr6:45365301	False			0	Read count too low: 1 < 8	FAIL	1
LINC-PINT--CHM	1	0	1.0	0.0	ONLY_REF_SPLICE	LINC-PINT^ENSG00000231721.7	chr7:130945720:-	CHM^ENSG00000188419.14	chrX:85964052:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:28611:22649	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr7--chrX]""]"	chr7:130945720-chrX:85964052	False			0	Read count too low: 1 < 8	FAIL	1
LIN7C--NIPA2	1	0	1.0	0.0	ONLY_REF_SPLICE	LIN7C^ENSG00000148943.12	chr11:27506716:-	NIPA2^ENSG00000140157.16	chr15:22858540:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1249:33894:13779	.	NO_LDAS	0.0034	GT	1.7232	AG	1.5546	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:27506716-chr15:22858540	False			0	Read count too low: 1 < 8	FAIL	1
LIN52--TMEM135	1	0	1.0	0.0	ONLY_REF_SPLICE	LIN52^ENSG00000205659.11	chr14:74101238:+	TMEM135^ENSG00000166575.17	chr11:87157341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:5126:19412	.	YES_LDAS	0.0034	GT	1.6402	AG	1.6895	"[""INTERCHROMOSOMAL[chr14--chr11]""]"	chr14:74101238-chr11:87157341	False			0	Read count too low: 1 < 8	FAIL	1
LIN52--NRIP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LIN52^ENSG00000205659.11	chr14:74198973:+	NRIP1^ENSG00000180530.11	chr21:15065893:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2418:1356:23728	.	NO_LDAS	0.0034	GT	1.4566	AG	1.8295	"[""INTERCHROMOSOMAL[chr14--chr21]""]"	chr14:74198973-chr21:15065893	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LIAS--LINC00674	1	0	1.0	0.0	ONLY_REF_SPLICE	LIAS^ENSG00000121897.15	chr4:39466117:+	LINC00674^ENSG00000237854.3	chr17:68114422:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1137:22495:18810	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr17]""]"	chr4:39466117-chr17:68114422	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LIAS--KIF27	1	0	1.0	0.0	ONLY_REF_SPLICE	LIAS^ENSG00000121897.15	chr4:39466117:+	KIF27^ENSG00000165115.15	chr9:83915678:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2223:23992:20477	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:39466117-chr9:83915678	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
LFNG--ZNF821	1	0	0.33	0.0	INCL_NON_REF_SPLICE	LFNG^ENSG00000106003.13	chr7:2527337:+	ZNF821^ENSG00000102984.15	chr16:71864940:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2223:27009:11803	.	NO_LDAS	0.0011	GT	1.5058	AG	1.9656	"[""INTERCHROMOSOMAL[chr7--chr16]""]"	chr7:2527337-chr16:71864940	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LCMT1--FTLP10	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LCMT1^ENSG00000205629.12	chr16:25111996:+	FTLP10^ENSG00000250426.2	chr4:68212406:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1311:36159:5988	.	NO_LDAS	0.0034	GT	1.9899	AG	1.7819	"[""INTERCHROMOSOMAL[chr16--chr4]""]"	chr16:25111996-chr4:68212406	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LCA5--KIAA0753	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LCA5^ENSG00000135338.14	chr6:79518705:-	KIAA0753^ENSG00000198920.11	chr17:6620869:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1267:15659:7530	.	NO_LDAS	0.0034	GT	1.7968	AG	1.6729	"[""INTERCHROMOSOMAL[chr6--chr17]""]"	chr6:79518705-chr17:6620869	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LAT2--ARHGAP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LAT2^ENSG00000086730.17	chr7:74220619:+	ARHGAP1^ENSG00000175220.12	chr11:46688202:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2469:28231:9632	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6402	"[""INTERCHROMOSOMAL[chr7--chr11]""]"	chr7:74220619-chr11:46688202	False			0	Read count too low: 1 < 8	FAIL	1
LARGE-AS1--TMTC2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LARGE-AS1^ENSG00000224973.6	chr22:33725101:+	TMTC2^ENSG00000179104.9	chr12:82687507:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2113:1324:10108	.	NO_LDAS	0.0034	GT	1.6402	AG	1.7819	"[""INTERCHROMOSOMAL[chr22--chr12]""]"	chr22:33725101-chr12:82687507	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
LAP3--SLC4A8	1	0	1.0	0.0	ONLY_REF_SPLICE	LAP3^ENSG00000002549.13	chr4:17588977:+	SLC4A8^ENSG00000050438.17	chr12:51485787:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2388:5247:28646	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr4--chr12]""]"	chr4:17588977-chr12:51485787	False			0	Read count too low: 1 < 8	FAIL	1
LAMTOR1--FBLN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	LAMTOR1^ENSG00000149357.10	chr11:72097843:-	FBLN1^ENSG00000077942.19	chr22:45527876:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1217:15360:27049	.	YES_LDAS	0.0034	GT	1.7819	AG	1.4295	"[""INTERCHROMOSOMAL[chr11--chr22]""]"	chr11:72097843-chr22:45527876	False			0	Read count too low: 1 < 8	FAIL	1
LACTB--ZFAND6	1	0	1.0	0.0	ONLY_REF_SPLICE	LACTB^ENSG00000103642.12	chr15:63127689:+	ZFAND6^ENSG00000086666.19	chr15:80120328:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2349:5377:20575	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr15:16.92Mb]""]"	chr15:63127689-chr15:80120328	False			0	Read count too low: 1 < 8	FAIL	1
KRTAP5-AS1--AP000867.5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KRTAP5-AS1^ENSG00000233930.4	chr11:1598277:+	AP000867.5^ENSG00000286948.1	chr11:71563684:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2362:12415:17885	.	YES_LDAS	0.0034	GT	1.6729	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:69.96Mb]""]"	chr11:1598277-chr11:71563684	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
KRTAP12-1--NSMAF	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KRTAP12-1^ENSG00000187175.5	chr21:44682032:-	NSMAF^ENSG00000035681.9	chr8:58599363:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1376:13159:15559	.	NO_LDAS	0.0034	GT	1.6895	AG	1.9329	"[""INTERCHROMOSOMAL[chr21--chr8]""]"	chr21:44682032-chr8:58599363	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KRT42P--OGDHL	1	0	1.0	0.0	ONLY_REF_SPLICE	KRT42P^ENSG00000214514.8	chr17:41634536:-	OGDHL^ENSG00000197444.10	chr10:49752740:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1212:41474:27357	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr17--chr10]""]"	chr17:41634536-chr10:49752740	False			0	Read count too low: 1 < 8	FAIL	1
KRT18P55--IAH1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KRT18P55^ENSG00000265480.5	chr17:28307135:-	IAH1^ENSG00000134330.19	chr2:9474582:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:22552:17815	.	NO_LDAS	0.0034	GT	1.5058	AG	1.231	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:28307135-chr2:9474582	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KRR1--NIPA1	1	0	1.0	0.0	ONLY_REF_SPLICE	KRR1^ENSG00000111615.14	chr12:75511513:-	NIPA1^ENSG00000170113.16	chr15:22810749:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2497:51255:2177	.	NO_LDAS	0.0034	GT	1.5656	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr15]""]"	chr12:75511513-chr15:22810749	False			0	Read count too low: 1 < 8	FAIL	1
KLRC4--KLRK1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KLRC4^ENSG00000183542.5	chr12:10407636:-	KLRK1^ENSG00000213809.9	chr12:10388875:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1425:8677:16764	.	YES_LDAS	0.0034	GT	1.3996	AG	1.9219	"[""HGNC_GENEFAM"",""ChimerSeq"",""INTRACHROMOSOMAL[chr12:0.02Mb]"",""NEIGHBORS[15508]""]"	chr12:10407636-chr12:10388875	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
KIFBP--AL162430.1	1	0	0.14	0.0	INCL_NON_REF_SPLICE	KIFBP^ENSG00000198954.9	chr10:68989105:+	AL162430.1^ENSG00000233406.5	chr1:51251340:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1348:37073:11495	.	YES_LDAS	0.0005	GT	1.7056	AG	1.5628	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:68989105-chr1:51251340	False			0	Read count too low: 1 < 8	FAIL	1
KIF13A--NR3C2	1	0	1.0	0.0	ONLY_REF_SPLICE	KIF13A^ENSG00000137177.20	chr6:17898168:-	NR3C2^ENSG00000151623.15	chr4:148152613:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2336:45430:6157	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTERCHROMOSOMAL[chr6--chr4]""]"	chr6:17898168-chr4:148152613	False			0	Read count too low: 1 < 8	FAIL	1
KIAA1328--ATP9B	1	0	1.0	0.0	ONLY_REF_SPLICE	KIAA1328^ENSG00000150477.15	chr18:36835376:+	ATP9B^ENSG00000166377.20	chr18:79143802:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2106:41377:14830	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8062	"[""INTRACHROMOSOMAL[chr18:41.84Mb]""]"	chr18:36835376-chr18:79143802	False			0	Read count too low: 1 < 8	FAIL	1
KIAA0825--FAM172A	1	0	1.0	0.0	ONLY_REF_SPLICE	KIAA0825^ENSG00000185261.14	chr5:94384368:-	FAM172A^ENSG00000113391.19	chr5:94074769:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2446:12334:9029	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr5:0.04Mb]"",""NEIGHBORS[41267]""]"	chr5:94384368-chr5:94074769	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
KIAA0753--LPIN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KIAA0753^ENSG00000198920.11	chr17:6596324:-	LPIN1^ENSG00000134324.12	chr2:11782393:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2393:52016:7109	.	NO_LDAS	0.0034	AT	1.7465	AC	1.9656	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:6596324-chr2:11782393	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KIAA0586--TOMM20L	1	0	1.0	0.0	ONLY_REF_SPLICE	KIAA0586^ENSG00000100578.18	chr14:58512627:+	TOMM20L^ENSG00000196860.8	chr14:58402680:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1257:23514:12056	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9656	"[""INTRACHROMOSOMAL[chr14:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[18683]""]"	chr14:58512627-chr14:58402680	False			0	Read count too low: 1 < 8	FAIL	1
KDELR2--IQCG	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KDELR2^ENSG00000136240.10	chr7:6463106:-	IQCG^ENSG00000114473.14	chr3:197958823:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2475:12350:27385	.	NO_LDAS	0.0034	GT	1.9086	AG	1.6402	"[""INTERCHROMOSOMAL[chr7--chr3]""]"	chr7:6463106-chr3:197958823	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KCTD9P2--AC091185.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	KCTD9P2^ENSG00000181819.14	chrX:105406795:+	AC091185.1^ENSG00000253476.1	chr8:25426327:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1393:38360:11061	.	YES_LDAS	0.0017	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chrX--chr8]""]"	chrX:105406795-chr8:25426327	False			0	Read count too low: 1 < 8	FAIL	1
KCNT2--MIER2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KCNT2^ENSG00000162687.19	chr1:196342079:-	MIER2^ENSG00000105556.11	chr19:313511:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:38707:22761	.	NO_LDAS	0.0034	GT	1.5329	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:196342079-chr19:313511	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KCNQ1--AP001282.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	KCNQ1^ENSG00000053918.18	chr11:2528018:+	AP001282.1^ENSG00000213252.3	chr11:106826778:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1409:46870:26530	.	YES_LDAS	0.0017	GT	1.8892	AG	1.9219	"[""INTRACHROMOSOMAL[chr11:103.98Mb]""]"	chr11:2528018-chr11:106826778	False			0	Read count too low: 1 < 8	FAIL	1
KCNH2--NAGPA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KCNH2^ENSG00000055118.16	chr7:150948444:-	NAGPA^ENSG00000103174.13	chr16:5025521:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:4867:4167	.	NO_LDAS	0.0034	GT	1.5301	AG	1.5219	"[""INTERCHROMOSOMAL[chr7--chr16]""]"	chr7:150948444-chr16:5025521	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KATNAL2--EPG5	1	0	1.0	0.0	ONLY_REF_SPLICE	KATNAL2^ENSG00000167216.17	chr18:46946923:+	EPG5^ENSG00000152223.15	chr18:45855687:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2393:42615:28716	.	YES_LDAS	0.0034	GT	1.4566	AG	1.7819	"[""INTRACHROMOSOMAL[chr18:0.95Mb]""]"	chr18:46946923-chr18:45855687	False			0	Read count too low: 1 < 8	FAIL	1
KASH5--C7orf50	1	0	1.0	0.0	INCL_NON_REF_SPLICE	KASH5^ENSG00000161609.10	chr19:49395146:+	C7orf50^ENSG00000146540.15	chr7:1010086:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2234:18175:18137	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr7]""]"	chr19:49395146-chr7:1010086	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
KANK3--BTC	1	0	1.0	0.0	ONLY_REF_SPLICE	KANK3^ENSG00000186994.11	chr19:8337795:-	BTC^ENSG00000174808.12	chr4:74748149:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:10651:19959	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9219	"[""INTERCHROMOSOMAL[chr19--chr4]""]"	chr19:8337795-chr4:74748149	False			0	Read count too low: 1 < 8	FAIL	1
KANK1--IL17RE	1	0	1.0	0.0	ONLY_REF_SPLICE	KANK1^ENSG00000107104.20	chr9:473273:+	IL17RE^ENSG00000163701.19	chr3:9906364:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:22892:3522	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""INTERCHROMOSOMAL[chr9--chr3]""]"	chr9:473273-chr3:9906364	False			0	Read count too low: 1 < 8	FAIL	1
JPH1--JPH4	1	0	0.5	0.0	ONLY_REF_SPLICE	JPH1^ENSG00000104369.5	chr8:74237208:-	JPH4^ENSG00000092051.17	chr14:23576456:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555	.	NO_LDAS	0.0017	GT	1.5656	AG	1.7465	"[""INTERCHROMOSOMAL[chr8--chr14]""]"	chr8:74237208-chr14:23576456	False			0	Read count too low: 1 < 8	FAIL	1
JPH1--JPH3	1	0	0.5	0.0	ONLY_REF_SPLICE	JPH1^ENSG00000104369.5	chr8:74237208:-	JPH3^ENSG00000154118.13	chr16:87644258:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:23870:24555	.	NO_LDAS	0.0017	GT	1.5656	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chr16]""]"	chr8:74237208-chr16:87644258	False			0	Read count too low: 1 < 8	FAIL	1
JMJD7--YJEFN3	1	0	1.0	0.0	ONLY_REF_SPLICE	JMJD7^ENSG00000243789.11	chr15:41836551:+	YJEFN3^ENSG00000250067.12	chr19:19529364:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:34614:10346	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr19]""]"	chr15:41836551-chr19:19529364	False			0	Read count too low: 1 < 8	FAIL	1
JAZF1--AL023775.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	JAZF1^ENSG00000153814.13	chr7:28180463:-	AL023775.1^ENSG00000235008.1	chr6:166702664:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2370:48755:15783	.	NO_LDAS	0.0017	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr7--chr6]""]"	chr7:28180463-chr6:166702664	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ITFG2--DDT	1	0	1.0	0.0	ONLY_REF_SPLICE	ITFG2^ENSG00000111203.13	chr12:2820225:+	DDT^ENSG00000099977.14	chr22:23971623:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:31645:4503	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr12--chr22]""]"	chr12:2820225-chr22:23971623	False			0	Read count too low: 1 < 8	FAIL	1
ITFG1--PHKB	1	0	1.0	0.0	ONLY_REF_SPLICE	ITFG1^ENSG00000129636.13	chr16:47428804:-	PHKB^ENSG00000102893.16	chr16:47497399:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:12965:5974	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""DEEPEST2019"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS_OVERLAP:-:+:[3026]""]"	chr16:47428804-chr16:47497399	False			0	Read count too low: 1 < 8	FAIL	1
ISY1--ACSS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ISY1^ENSG00000240682.10	chr3:129130550:-	ACSS1^ENSG00000154930.15	chr20:25012826:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:1534:27511	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9899	"[""INTERCHROMOSOMAL[chr3--chr20]""]"	chr3:129130550-chr20:25012826	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ISCA1--GOLM1	1	0	1.0	0.0	ONLY_REF_SPLICE	ISCA1^ENSG00000135070.15	chr9:86272007:-	GOLM1^ENSG00000135052.16	chr9:86079341:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1160:28425:3746	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr9:0.16Mb]""]"	chr9:86272007-chr9:86079341	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
IQCK--ZNF804B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IQCK^ENSG00000174628.16	chr16:19735450:+	ZNF804B^ENSG00000182348.7	chr7:89338518:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:24137:5708	.	NO_LDAS	0.0034	GT	1.5656	AG	0.9183	"[""INTERCHROMOSOMAL[chr16--chr7]""]"	chr16:19735450-chr7:89338518	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IQCH-AS1--AC108471.3	1	0	0.5	0.0	INCL_NON_REF_SPLICE	IQCH-AS1^ENSG00000259673.6	chr15:67519000:-	AC108471.3^ENSG00000286349.1	chr4:39615146:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:33587:12714	.	YES_LDAS	0.0017	GT	1.7465	AG	1.9656	"[""INTERCHROMOSOMAL[chr15--chr4]""]"	chr15:67519000-chr4:39615146	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
IPPK--ATG7	1	0	1.0	0.0	ONLY_REF_SPLICE	IPPK^ENSG00000127080.10	chr9:92652573:-	ATG7^ENSG00000197548.12	chr3:11298686:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2111:25763:3873	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7968	"[""INTERCHROMOSOMAL[chr9--chr3]""]"	chr9:92652573-chr3:11298686	False			0	Read count too low: 1 < 8	FAIL	1
IPP--AD001527.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IPP^ENSG00000197429.11	chr1:45727631:-	AD001527.1^ENSG00000270760.1	chr19:36148044:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1346:22851:6899	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:45727631-chr19:36148044	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IPO11--SREK1IP1	1	0	1.0	0.0	ONLY_REF_SPLICE	IPO11^ENSG00000086200.17	chr5:62412929:+	SREK1IP1^ENSG00000153006.16	chr5:64741200:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2132:30229:15615	.	NO_LDAS	0.0034	GT	1.5219	AG	1.9086	"[""INTRACHROMOSOMAL[chr5:2.09Mb]""]"	chr5:62412929-chr5:64741200	False			0	Read count too low: 1 < 8	FAIL	1
INTS4--AC104073.4	1	0	1.0	0.0	ONLY_REF_SPLICE	INTS4^ENSG00000149262.17	chr11:77891319:-	AC104073.4^ENSG00000282381.1	chr7:65303529:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:14251:19076	.	YES_LDAS	0.0034	GT	1.9899	AG	1.6729	"[""INTERCHROMOSOMAL[chr11--chr7]""]"	chr11:77891319-chr7:65303529	False			0	Read count too low: 1 < 8	FAIL	1
INSL3--NPR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	INSL3^ENSG00000248099.4	chr19:17821456:-	NPR2^ENSG00000159899.15	chr9:35800389:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1305:48925:10388	.	NO_LDAS	0.0034	GT	1.5058	AG	1.7968	"[""INTERCHROMOSOMAL[chr19--chr9]""]"	chr19:17821456-chr9:35800389	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
INSC--LINC02751	1	0	1.0	0.0	INCL_NON_REF_SPLICE	INSC^ENSG00000188487.12	chr11:15269627:+	LINC02751^ENSG00000254946.2	chr11:15561878:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:12067:16385	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:0.31Mb]""]"	chr11:15269627-chr11:15561878	False			0	Read count too low: 1 < 8	FAIL	1
INPP4B--CNN3	1	0	1.0	0.0	ONLY_REF_SPLICE	INPP4B^ENSG00000109452.12	chr4:142402938:-	CNN3^ENSG00000117519.16	chr1:94903524:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:15797:14382	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:142402938-chr1:94903524	False			0	Read count too low: 1 < 8	FAIL	1
INPP4B--ACTR3B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	INPP4B^ENSG00000109452.12	chr4:142124649:-	ACTR3B^ENSG00000133627.18	chr7:152820348:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:20367:24849	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr4--chr7]""]"	chr4:142124649-chr7:152820348	False			0	Read count too low: 1 < 8	FAIL	1
ING3--CMC4	1	0	1.0	0.0	ONLY_REF_SPLICE	ING3^ENSG00000071243.16	chr7:120955624:+	CMC4^ENSG00000182712.16	chrX:155064033:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1262:17827:6857	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8295	"[""INTERCHROMOSOMAL[chr7--chrX]""]"	chr7:120955624-chrX:155064033	False			0	Read count too low: 1 < 8	FAIL	1
IMPDH1--AC004623.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IMPDH1^ENSG00000106348.18	chr7:128409756:-	AC004623.1^ENSG00000279488.1	chr19:1373884:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2302:29291:3844	.	NO_LDAS	0.0034	GT	1.8256	AG	1.4256	"[""INTERCHROMOSOMAL[chr7--chr19]""]"	chr7:128409756-chr19:1373884	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IMPA1--SLC10A5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IMPA1^ENSG00000133731.10	chr8:81673841:-	SLC10A5^ENSG00000253598.3	chr8:81694923:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2149:37470:4811	.	YES_LDAS	0.0034	GT	1.8295	AG	1.6895	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[7300]""]"	chr8:81673841-chr8:81694923	False			0	Read count too low: 1 < 8	FAIL	1
IMMP1L--ZNF607	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IMMP1L^ENSG00000148950.11	chr11:31488128:-	ZNF607^ENSG00000198182.13	chr19:37711692:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2161:29598:17857	.	YES_LDAS	0.0034	GT	1.9219	AG	1.3383	"[""INTERCHROMOSOMAL[chr11--chr19]""]"	chr11:31488128-chr19:37711692	False			0	Read count too low: 1 < 8	FAIL	1
ILRUN--TMCO4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ILRUN^ENSG00000196821.10	chr6:34588913:-	TMCO4^ENSG00000162542.14	chr1:19682807:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:46215:12981	.	YES_LDAS	0.0034	GT	1.5301	AG	1.7232	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:34588913-chr1:19682807	False			0	Read count too low: 1 < 8	FAIL	1
IL7--AC068700.2	1	0	1.0	0.0	ONLY_REF_SPLICE	IL7^ENSG00000104432.14	chr8:78798128:-	AC068700.2^ENSG00000286675.1	chr8:78630426:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2382:3508:29389	.	YES_LDAS	0.0034	GT	1.5656	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""NEIGHBORS[9761]""]"	chr8:78798128-chr8:78630426	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
IL22RA1--SMAP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IL22RA1^ENSG00000142677.4	chr1:24137127:-	SMAP2^ENSG00000084070.12	chr1:40414172:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1107:42939:1897	.	NO_LDAS	0.0034	GT	1.9899	AG	1.7056	"[""INTRACHROMOSOMAL[chr1:16.20Mb]""]"	chr1:24137127-chr1:40414172	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IL1RAP--CEP70	1	0	1.0	0.0	ONLY_REF_SPLICE	IL1RAP^ENSG00000196083.10	chr3:190514219:+	CEP70^ENSG00000114107.9	chr3:138529462:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1271:25327:8413	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5546	"[""INTRACHROMOSOMAL[chr3:51.92Mb]""]"	chr3:190514219-chr3:138529462	False			0	Read count too low: 1 < 8	FAIL	1
IL15RA--AC109630.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	IL15RA^ENSG00000134470.21	chr10:5977405:-	AC109630.1^ENSG00000259269.2	chr15:39496646:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2476:41588:29011	.	NO_LDAS	0.0017	GT	1.2729	AG	1.7968	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:5977405-chr15:39496646	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IL10RB--IFNAR2	1	0	1.0	0.0	ONLY_REF_SPLICE	IL10RB^ENSG00000243646.10	chr21:33288261:+	IFNAR2^ENSG00000159110.20	chr21:33241886:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:31928:2107	.	NO_LDAS	0.0034	GT	1.8062	AG	1.6729	"[""DGD_PARALOGS"",""INTRACHROMOSOMAL[chr21:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[692]""]"	chr21:33288261-chr21:33241886	False			0	Excluded annotation pattern: DGD_PARALOGS	FAIL	1
IK--TMEM254	1	0	1.0	0.0	ONLY_REF_SPLICE	IK^ENSG00000113141.18	chr5:140655992:+	TMEM254^ENSG00000133678.14	chr10:80090797:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1276:25205:28772	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr10]""]"	chr5:140655992-chr10:80090797	False			0	Read count too low: 1 < 8	FAIL	1
IFT88--RRN3	1	0	1.0	0.0	ONLY_REF_SPLICE	IFT88^ENSG00000032742.18	chr13:20598753:+	RRN3^ENSG00000085721.13	chr16:15073080:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2189:39225:21640	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8256	"[""INTERCHROMOSOMAL[chr13--chr16]""]"	chr13:20598753-chr16:15073080	False			0	Read count too low: 1 < 8	FAIL	1
IFT43--TTC22	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IFT43^ENSG00000119650.13	chr14:76059373:+	TTC22^ENSG00000006555.11	chr1:54782444:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1267:34226:10907	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr14--chr1]""]"	chr14:76059373-chr1:54782444	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IFT43--FAM122C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IFT43^ENSG00000119650.13	chr14:75902224:+	FAM122C^ENSG00000156500.15	chrX:134835679:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1263:45980:27035	.	NO_LDAS	0.0034	GT	1.8892	AG	1.3996	"[""INTERCHROMOSOMAL[chr14--chrX]""]"	chr14:75902224-chrX:134835679	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
IFT122--MAGT1	1	0	1.0	0.0	ONLY_REF_SPLICE	IFT122^ENSG00000163913.12	chr3:129458015:+	MAGT1^ENSG00000102158.20	chrX:77870925:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2351:48561:6423	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr3--chrX]""]"	chr3:129458015-chrX:77870925	False			0	Read count too low: 1 < 8	FAIL	1
IFFO2--NKIRAS2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	IFFO2^ENSG00000169991.11	chr1:18908530:-	NKIRAS2^ENSG00000168256.18	chr17:42025204:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2282:39403:21024	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9219	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:18908530-chr17:42025204	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HSPH1--WDFY2	1	0	1.0	0.0	ONLY_REF_SPLICE	HSPH1^ENSG00000120694.20	chr13:31154633:-	WDFY2^ENSG00000139668.9	chr13:51759740:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1139:14785:22915	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9086	"[""INTRACHROMOSOMAL[chr13:20.42Mb]""]"	chr13:31154633-chr13:51759740	False			0	Read count too low: 1 < 8	FAIL	1
HSPH1--ELAPOR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSPH1^ENSG00000120694.20	chr13:31149954:-	ELAPOR1^ENSG00000116299.17	chr1:109204068:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2131:40503:21892	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr13--chr1]""]"	chr13:31149954-chr1:109204068	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HSPE1--NBN	1	0	1.0	0.0	ONLY_REF_SPLICE	HSPE1^ENSG00000115541.11	chr2:197501238:+	NBN^ENSG00000104320.14	chr8:89958854:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:17350:8188	.	YES_LDAS	0.0034	GT	1.7819	AG	1.6049	"[""INTERCHROMOSOMAL[chr2--chr8]""]"	chr2:197501238-chr8:89958854	False			0	Read count too low: 1 < 8	FAIL	1
HSPA1B--ASB17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSPA1B^ENSG00000204388.7	chr6:31829997:+	ASB17^ENSG00000154007.7	chr1:75931917:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2283:40698:20379	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9899	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:31829997-chr1:75931917	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
HSF2--TAMM41	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSF2^ENSG00000025156.13	chr6:122432005:+	TAMM41^ENSG00000144559.10	chr3:11808629:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1197:10797:24246	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:122432005-chr3:11808629	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HSDL2--EPB41L4A-AS1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	HSDL2^ENSG00000119471.15	chr9:112470563:+	EPB41L4A-AS1^ENSG00000224032.7	chr5:112160997:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1150:22778:1532	.	NO_LDAS	0.0017	GT	0.5665	AG	1.7056	"[""INTERCHROMOSOMAL[chr9--chr5]""]"	chr9:112470563-chr5:112160997	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HSBP1L1--BDH1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HSBP1L1^ENSG00000226742.4	chr18:79966762:+	BDH1^ENSG00000161267.12	chr3:197522693:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1440:33538:14704	.	NO_LDAS	0.0034	GT	1.6895	AG	1.3996	"[""INTERCHROMOSOMAL[chr18--chr3]""]"	chr18:79966762-chr3:197522693	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HRH4--IMPACT	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HRH4^ENSG00000134489.7	chr18:24477077:+	IMPACT^ENSG00000154059.11	chr18:24428869:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:50268:29641	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7106]""]"	chr18:24477077-chr18:24428869	False			0	Read count too low: 1 < 8	FAIL	1
HPCAL4--VSNL1	1	0	1.0	0.0	ONLY_REF_SPLICE	HPCAL4^ENSG00000116983.13	chr1:39683937:-	VSNL1^ENSG00000163032.12	chr2:17592070:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1103:6784:8693	.	NO_LDAS	0.0034	GT	1.9656	AG	1.6402	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:39683937-chr2:17592070	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
HOXB13--STRIP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HOXB13^ENSG00000159184.8	chr17:48728645:-	STRIP1^ENSG00000143093.15	chr1:110041734:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1167:36847:6535	.	NO_LDAS	0.0034	GT	1.5546	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:48728645-chr1:110041734	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HNRNPCP2--PLCH2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HNRNPCP2^ENSG00000204253.4	chr2:189923644:+	PLCH2^ENSG00000149527.18	chr1:2479814:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2201:13685:6465	.	YES_LDAS	0.0034	AT	1.8892	AC	1.7968	"[""INTERCHROMOSOMAL[chr2--chr1]""]"	chr2:189923644-chr1:2479814	False			0	Read count too low: 1 < 8	FAIL	1
HNRNPA1P3--HNRNPA1P7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HNRNPA1P3^ENSG00000226188.2	chr20:45745982:-	HNRNPA1P7^ENSG00000215492.6	chr18:32412975:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1402:36774:15965	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr20--chr18]""]"	chr20:45745982-chr18:32412975	False			0	Read count too low: 1 < 8	FAIL	1
HMOX2--NAGPA	1	0	1.0	0.0	ONLY_REF_SPLICE	HMOX2^ENSG00000103415.12	chr16:4507012:+	NAGPA^ENSG00000103174.13	chr16:5031884:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:18094:20968	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.51Mb]""]"	chr16:4507012-chr16:5031884	False			0	Read count too low: 1 < 8	FAIL	1
HMGA1P4--PCCA	1	0	1.0	0.0	ONLY_REF_SPLICE	HMGA1P4^ENSG00000234705.2	chr9:128684366:-	PCCA^ENSG00000175198.17	chr13:100330561:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1314:10579:17675	.	NO_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""INTERCHROMOSOMAL[chr9--chr13]""]"	chr9:128684366-chr13:100330561	False			0	Read count too low: 1 < 8	FAIL	1
HMGA1P3--KIAA0753	1	0	0.5	0.0	INCL_NON_REF_SPLICE	HMGA1P3^ENSG00000258011.2	chr12:110430108:-	KIAA0753^ENSG00000198920.11	chr17:6607024:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2317:2853:8665	.	YES_LDAS	0.0017	GC	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr17]""]"	chr12:110430108-chr17:6607024	False			0	Read count too low: 1 < 8	FAIL	1
HLF--NPM1P21	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HLF^ENSG00000108924.14	chr17:55265062:+	NPM1P21^ENSG00000248578.1	chr8:56101596:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1261:42089:2499	.	NO_LDAS	0.0034	GT	0.9056	AG	1.8323	"[""INTERCHROMOSOMAL[chr17--chr8]""]"	chr17:55265062-chr8:56101596	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HLA-F-AS1--YJEFN3	1	0	1.0	0.0	ONLY_REF_SPLICE	HLA-F-AS1^ENSG00000214922.9	chr6:29748900:-	YJEFN3^ENSG00000250067.12	chr19:19535034:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1141:48602:9267	.	YES_LDAS	0.0034	GT	1.8295	AG	1.5301	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:29748900-chr19:19535034	False			0	Read count too low: 1 < 8	FAIL	1
HIGD1A--CCDC13	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HIGD1A^ENSG00000181061.14	chr3:42804436:-	CCDC13^ENSG00000244607.7	chr3:42758346:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2424:40601:28422	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8323	"[""ConjoinG"",""INTRACHROMOSOMAL[chr3:0.01Mb]"",""NEIGHBORS[9655]""]"	chr3:42804436-chr3:42758346	False			0	Excluded annotation pattern: ConjoinG	FAIL	1
HHAT--SENP7	1	0	1.0	0.0	ONLY_REF_SPLICE	HHAT^ENSG00000054392.13	chr1:210588099:+	SENP7^ENSG00000138468.16	chr3:101372126:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1345:44379:21878	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8256	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:210588099-chr3:101372126	False			0	Read count too low: 1 < 8	FAIL	1
HEXIM2--ZFAS1	1	0	1.0	0.0	ONLY_REF_SPLICE	HEXIM2^ENSG00000168517.10	chr17:45162859:+	ZFAS1^ENSG00000177410.13	chr20:49289045:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2276:44807:12476	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8323	"[""INTERCHROMOSOMAL[chr17--chr20]""]"	chr17:45162859-chr20:49289045	False			0	Read count too low: 1 < 8	FAIL	1
HERC4--TUBD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HERC4^ENSG00000148634.16	chr10:67954595:-	TUBD1^ENSG00000108423.15	chr17:59860353:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2436:28781:13611	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr17]""]"	chr10:67954595-chr17:59860353	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
HERC2P10--GOLGA8UP	1	0	1.0	0.0	ONLY_REF_SPLICE	HERC2P10^ENSG00000259845.1	chr15:30836910:+	GOLGA8UP^ENSG00000103832.10	chr15:30793291:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2209:39913:12014	.	YES_LDAS	0.0034	GT	1.7968	AG	1.5058	"[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13412]""]"	chr15:30836910-chr15:30793291	False			0	Read count too low: 1 < 8	FAIL	1
HELQ--ABRAXAS1	1	0	1.0	0.0	ONLY_REF_SPLICE	HELQ^ENSG00000163312.11	chr4:83448783:-	ABRAXAS1^ENSG00000163322.14	chr4:83469151:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1206:33174:15026	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9219	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr4:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3662]""]"	chr4:83448783-chr4:83469151	False			0	Read count too low: 1 < 8	FAIL	1
HELLS--FAM114A2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HELLS^ENSG00000119969.15	chr10:94571429:+	FAM114A2^ENSG00000055147.19	chr5:154029560:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1298:50851:7614	.	NO_LDAS	0.0034	GT	1.231	AG	1.7819	"[""INTERCHROMOSOMAL[chr10--chr5]""]"	chr10:94571429-chr5:154029560	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HELLPAR--PARPBP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HELLPAR^ENSG00000281344.1	chr12:102205157:+	PARPBP^ENSG00000185480.12	chr12:102148230:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2132:29550:26544	.	YES_LDAS	0.0034	GT	1.5301	AG	1.9329	"[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[65]""]"	chr12:102205157-chr12:102148230	False			0	Read count too low: 1 < 8	FAIL	1
HDHD5--DCAF17	1	0	0.25	0.0	INCL_NON_REF_SPLICE	HDHD5^ENSG00000069998.12	chr22:17142964:-	DCAF17^ENSG00000115827.14	chr2:171448681:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2358:26799:12588	.	NO_LDAS	0.0008	GT	1.9086	AG	1.9899	"[""INTERCHROMOSOMAL[chr22--chr2]""]"	chr22:17142964-chr2:171448681	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HDHD2--ZNF407	1	0	1.0	0.0	ONLY_REF_SPLICE	HDHD2^ENSG00000167220.12	chr18:47150378:-	ZNF407^ENSG00000215421.9	chr18:74781428:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:18547:16960	.	NO_LDAS	0.0034	GT	1.7232	AG	1.6402	"[""INTRACHROMOSOMAL[chr18:27.45Mb]""]"	chr18:47150378-chr18:74781428	False			0	Read count too low: 1 < 8	FAIL	1
HCG9--TMEM61	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HCG9^ENSG00000204625.10	chr6:29975517:+	TMEM61^ENSG00000143001.5	chr1:54980954:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:13216:10556	.	NO_LDAS	0.0034	GT	1.1589	AG	1.7056	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:29975517-chr1:54980954	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HAUS7--ECHDC2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	HAUS7^ENSG00000213397.11	chrX:153470828:-	ECHDC2^ENSG00000121310.17	chr1:52911790:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1127:8022:1084	.	NO_LDAS	0.0034	GT	1.2419	AG	1.9899	"[""INTERCHROMOSOMAL[chrX--chr1]""]"	chrX:153470828-chr1:52911790	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HAUS5--CLCN2	1	0	0.33	0.0	INCL_NON_REF_SPLICE	HAUS5^ENSG00000249115.9	chr19:35618658:+	CLCN2^ENSG00000114859.16	chr3:184355460:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921	.	NO_LDAS	0.0011	GT	1.6895	AG	1.7819	"[""INTERCHROMOSOMAL[chr19--chr3]""]"	chr19:35618658-chr3:184355460	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
HAUS3--MXD4	1	0	1.0	0.0	ONLY_REF_SPLICE	HAUS3^ENSG00000214367.9	chr4:2080958:-	MXD4^ENSG00000123933.17	chr4:2252522:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1157:42939:25129	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5156]""]"	chr4:2080958-chr4:2252522	False			0	Read count too low: 1 < 8	FAIL	1
H4C8--AC006122.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	H4C8^ENSG00000158406.5	chr6:26285448:-	AC006122.1^ENSG00000213970.4	chr12:4324635:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2380:3937:23069	.	YES_LDAS	0.0008	GT	1.6895	AG	1.6895	"[""INTERCHROMOSOMAL[chr6--chr12]""]"	chr6:26285448-chr12:4324635	False			0	Read count too low: 1 < 8	FAIL	1
H3P35--H3P16	1	0	1.0	0.0	INCL_NON_REF_SPLICE	H3P35^ENSG00000257287.1	chr12:72432001:-	H3P16^ENSG00000178458.5	chr4:139698481:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:42841:8735	.	NO_LDAS	0.0034	GT	1.7968	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:72432001-chr4:139698481	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
H3C15--H3P17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	H3C15^ENSG00000203852.3	chr1:149852814:+	H3P17^ENSG00000248205.1	chr5:17502219:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1356:6631:23784	.	NO_LDAS	0.0034	GC	1.7968	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:149852814-chr5:17502219	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
H2BC11--BVES	1	0	1.0	0.0	ONLY_REF_SPLICE	H2BC11^ENSG00000124635.9	chr6:27132525:-	BVES^ENSG00000112276.14	chr6:105133588:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:45535:23854	.	YES_LDAS	0.0034	GT	1.9086	AG	1.6895	"[""INTRACHROMOSOMAL[chr6:77.96Mb]""]"	chr6:27132525-chr6:105133588	False			0	Read count too low: 1 < 8	FAIL	1
GUCA1B--MRPS10	1	0	1.0	0.0	ONLY_REF_SPLICE	GUCA1B^ENSG00000112599.9	chr6:42188582:-	MRPS10^ENSG00000048544.6	chr6:42211917:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:4414:11733	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""INTRACHROMOSOMAL[chr6:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[11851]""]"	chr6:42188582-chr6:42211917	False			0	Read count too low: 1 < 8	FAIL	1
GTPBP10--RFC1	1	0	1.0	0.0	ONLY_REF_SPLICE	GTPBP10^ENSG00000105793.16	chr7:90346774:+	RFC1^ENSG00000035928.16	chr4:39304928:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1220:30173:21178	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr4]""]"	chr7:90346774-chr4:39304928	False			0	Read count too low: 1 < 8	FAIL	1
GTF2IP20--GTF2IP1	1	0	0.5	0.0	ONLY_REF_SPLICE	GTF2IP20^ENSG00000272645.3	chr1:223988045:-	GTF2IP1^ENSG00000277053.4	chr7:75210599:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2421:41539:27581	.	NO_LDAS	0.0017	GT	1.9656	AG	1.5058	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:223988045-chr7:75210599	False			0	Read count too low: 1 < 8	FAIL	1
GTF2H5--MILR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GTF2H5^ENSG00000272047.3	chr6:158170538:+	MILR1^ENSG00000271605.6	chr17:64468334:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:24809:13793	.	NO_LDAS	0.0034	GT	1.8256	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr17]""]"	chr6:158170538-chr17:64468334	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GTF2E2--PCMTD2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GTF2E2^ENSG00000197265.9	chr8:30658137:-	PCMTD2^ENSG00000203880.12	chr20:64255877:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:22236:22425	.	NO_LDAS	0.0034	GT	1.2419	AG	0.9183	"[""INTERCHROMOSOMAL[chr8--chr20]""]"	chr8:30658137-chr20:64255877	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GTDC1--PDP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GTDC1^ENSG00000121964.14	chr2:144145572:-	PDP2^ENSG00000172840.7	chr16:66889483:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1373:1526:7067	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:144145572-chr16:66889483	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GSDMB--AC105219.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GSDMB^ENSG00000073605.18	chr17:39912326:-	AC105219.3^ENSG00000254973.2	chr8:143758435:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:15141:26054	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr8]""]"	chr17:39912326-chr8:143758435	False			0	Read count too low: 1 < 8	FAIL	1
GRIN2C--ANKRD33	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GRIN2C^ENSG00000161509.14	chr17:74852640:-	ANKRD33^ENSG00000167612.13	chr12:51888044:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:17868:26236	.	NO_LDAS	0.0034	GC	1.3996	AG	1.6895	"[""INTERCHROMOSOMAL[chr17--chr12]""]"	chr17:74852640-chr12:51888044	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GRID2--RAPGEF6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GRID2^ENSG00000152208.13	chr4:93626367:+	RAPGEF6^ENSG00000158987.22	chr5:131603291:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2488:40560:4615	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr5]""]"	chr4:93626367-chr5:131603291	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GPT--NENF	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GPT^ENSG00000167701.14	chr8:144505530:+	NENF^ENSG00000117691.10	chr1:212433043:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:49006:29473	.	YES_LDAS	0.0034	GT	1.2366	AG	1.5546	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:144505530-chr1:212433043	False			0	Read count too low: 1 < 8	FAIL	1
GPSM2--EPM2A	1	0	1.0	0.0	ONLY_REF_SPLICE	GPSM2^ENSG00000121957.15	chr1:108904254:+	EPM2A^ENSG00000112425.16	chr6:145627693:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1469:27810:20421	.	YES_LDAS	0.0034	GT	1.8256	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:108904254-chr6:145627693	False			0	Read count too low: 1 < 8	FAIL	1
GPRIN2--NPY4R	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GPRIN2^ENSG00000204175.5	chr10:46550365:-	NPY4R^ENSG00000204174.8	chr10:46462694:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1475:32341:1504	.	YES_LDAS	0.0017	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr10:0.08Mb]"",""NEIGHBORS[83086]""]"	chr10:46550365-chr10:46462694	False			0	Read count too low: 1 < 8	FAIL	1
GPRC5D-AS1--MAOB	1	0	1.0	0.0	ONLY_REF_SPLICE	GPRC5D-AS1^ENSG00000247498.10	chr12:12927803:+	MAOB^ENSG00000069535.14	chrX:43778739:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1442:26815:9225	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8256	"[""INTERCHROMOSOMAL[chr12--chrX]""]"	chr12:12927803-chrX:43778739	False			0	Read count too low: 1 < 8	FAIL	1
GPRC5D-AS1--FAM234B	1	0	1.0	0.0	ONLY_REF_SPLICE	GPRC5D-AS1^ENSG00000247498.10	chr12:12979622:+	FAM234B^ENSG00000084444.14	chr12:13055551:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1302:43270:9393	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5219	"[""INTRACHROMOSOMAL[chr12:0.06Mb]"",""NEIGHBORS[59736]""]"	chr12:12979622-chr12:13055551	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
GPRASP1--ALDH2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GPRASP1^ENSG00000198932.13	chrX:102651328:+	ALDH2^ENSG00000111275.13	chr12:111798133:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1477:5466:6353	.	YES_LDAS	0.0034	GT	1.5546	AG	1.6729	"[""INTERCHROMOSOMAL[chrX--chr12]""]"	chrX:102651328-chr12:111798133	False			0	Read count too low: 1 < 8	FAIL	1
GPR173--WBP1P1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GPR173^ENSG00000184194.6	chrX:53049484:+	WBP1P1^ENSG00000231351.2	chr2:86930685:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1228:41353:5008	.	YES_LDAS	0.0017	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chrX--chr2]""]"	chrX:53049484-chr2:86930685	False			0	Read count too low: 1 < 8	FAIL	1
GPM6A--SCLT1	1	0	1.0	0.0	ONLY_REF_SPLICE	GPM6A^ENSG00000150625.16	chr4:175673680:-	SCLT1^ENSG00000151466.12	chr4:128936851:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2115:34970:26993	.	NO_LDAS	0.0034	GT	1.6895	AG	1.8295	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr4:46.54Mb]""]"	chr4:175673680-chr4:128936851	False			0	Read count too low: 1 < 8	FAIL	1
GPHN--MNAT1	1	0	1.0	0.0	ONLY_REF_SPLICE	GPHN^ENSG00000171723.16	chr14:66965325:+	MNAT1^ENSG00000020426.11	chr14:60879714:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1429:21484:12686	.	YES_LDAS	0.0034	GT	1.5628	AG	1.9086	"[""INTRACHROMOSOMAL[chr14:5.54Mb]""]"	chr14:66965325-chr14:60879714	False			0	Read count too low: 1 < 8	FAIL	1
GPATCH2L--CREBZF	1	0	1.0	0.0	ONLY_REF_SPLICE	GPATCH2L^ENSG00000089916.18	chr14:76195972:+	CREBZF^ENSG00000137504.14	chr11:85663601:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:17253:19762	.	YES_LDAS	0.0034	GT	1.8892	AG	1.3753	"[""INTERCHROMOSOMAL[chr14--chr11]""]"	chr14:76195972-chr11:85663601	False			0	Read count too low: 1 < 8	FAIL	1
GPATCH2--SPATA17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GPATCH2^ENSG00000092978.11	chr1:217610321:-	SPATA17^ENSG00000162814.11	chr1:217741960:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1401:51918:22915	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_INVERSION:-:+:[234]""]"	chr1:217610321-chr1:217741960	False			0	Read count too low: 1 < 8	FAIL	1
GOLIM4--SCUBE1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GOLIM4^ENSG00000173905.9	chr3:168029220:-	SCUBE1^ENSG00000159307.19	chr22:43227480:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:29995:13891	.	NO_LDAS	0.0034	GT	1.231	AG	1.7819	"[""INTERCHROMOSOMAL[chr3--chr22]""]"	chr3:168029220-chr22:43227480	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GOLGA8H--AC019322.1	1	0	0.08	0.0	INCL_NON_REF_SPLICE	GOLGA8H^ENSG00000261794.1	chr15:30607119:+	AC019322.1^ENSG00000263070.1	chr15:30386960:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2133:9260:4377	.	NO_LDAS	0.0003	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chr15:0.22Mb]""]"	chr15:30607119-chr15:30386960	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GOLGA2P8--AC019294.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GOLGA2P8^ENSG00000214433.4	chr15:90295157:+	AC019294.1^ENSG00000187812.12	chr15:75786372:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1343:3322:6815	.	NO_LDAS	0.0034	GT	1.4566	AG	1.8062	"[""INTRACHROMOSOMAL[chr15:14.51Mb]""]"	chr15:90295157-chr15:75786372	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GOLGA2P2Y--AC100827.2	1	0	0.14	0.0	ONLY_REF_SPLICE	GOLGA2P2Y^ENSG00000239533.6	chrY:24215462:-	AC100827.2^ENSG00000260144.1	chr15:72607514:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1464:23280:27091	.	NO_LDAS	0.0005	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chrY--chr15]""]"	chrY:24215462-chr15:72607514	False			0	Read count too low: 1 < 8	FAIL	1
GNPAT--COG2	1	0	1.0	0.0	ONLY_REF_SPLICE	GNPAT^ENSG00000116906.13	chr1:231241456:+	COG2^ENSG00000135775.14	chr1:230659464:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2259:16136:14382	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:0.55Mb]""]"	chr1:231241456-chr1:230659464	False			0	Read count too low: 1 < 8	FAIL	1
GNLY--SEC22B	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GNLY^ENSG00000115523.17	chr2:85696682:+	SEC22B^ENSG00000265808.4	chr1:120157192:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1336:19267:15657	.	NO_LDAS	0.0017	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr2--chr1]""]"	chr2:85696682-chr1:120157192	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GNAI3--AC126323.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GNAI3^ENSG00000065135.12	chr1:109548838:+	AC126323.1^ENSG00000166104.15	chr15:62246572:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:34145:24891	.	NO_LDAS	0.0017	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr15]""]"	chr1:109548838-chr15:62246572	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
GNAI3--AC126323.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GNAI3^ENSG00000065135.12	chr1:109548838:+	AC126323.1^ENSG00000166104.15	chr15:62246254:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1441:34145:24891	.	NO_LDAS	0.0017	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr15]""]"	chr1:109548838-chr15:62246254	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
GMFB--TIMMDC1	1	0	1.0	0.0	ONLY_REF_SPLICE	GMFB^ENSG00000197045.13	chr14:54488925:-	TIMMDC1^ENSG00000113845.10	chr3:119513641:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2354:29153:9828	.	YES_LDAS	0.0034	GT	1.7056	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr3]""]"	chr14:54488925-chr3:119513641	False			0	Read count too low: 1 < 8	FAIL	1
GMDS--ELOVL5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GMDS^ENSG00000112699.11	chr6:1624054:-	ELOVL5^ENSG00000012660.14	chr6:53273344:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2188:34274:3901	.	NO_LDAS	0.0034	GC	1.371	AG	1.8295	"[""INTRACHROMOSOMAL[chr6:51.02Mb]""]"	chr6:1624054-chr6:53273344	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GLYATL1--ZNF654	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GLYATL1^ENSG00000166840.13	chr11:58907955:+	ZNF654^ENSG00000175105.8	chr3:88140560:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1122:28482:4601	.	NO_LDAS	0.0034	GT	1.8062	AG	1.8295	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:58907955-chr3:88140560	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GLIS3--SPATA6L	1	0	1.0	0.0	ONLY_REF_SPLICE	GLIS3^ENSG00000107249.23	chr9:4286038:-	SPATA6L^ENSG00000106686.16	chr9:4666256:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1407:24631:1771	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr9:0.20Mb]""]"	chr9:4286038-chr9:4666256	False			0	Read count too low: 1 < 8	FAIL	1
GLIS3--RFX3	1	0	1.0	0.0	ONLY_REF_SPLICE	GLIS3^ENSG00000107249.23	chr9:4117768:-	RFX3^ENSG00000080298.15	chr9:3346764:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:49313:13191	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:0.30Mb]""]"	chr9:4117768-chr9:3346764	False			0	Read count too low: 1 < 8	FAIL	1
GJB4--NFIA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GJB4^ENSG00000189433.7	chr1:34762041:+	NFIA^ENSG00000162599.17	chr1:61359147:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2127:12561:3172	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7968	"[""INTRACHROMOSOMAL[chr1:26.10Mb]""]"	chr1:34762041-chr1:61359147	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GFOD2--ENKD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GFOD2^ENSG00000141098.13	chr16:67685457:-	ENKD1^ENSG00000124074.12	chr16:67667093:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:2828:12938	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""NEIGHBORS[7266]""]"	chr16:67685457-chr16:67667093	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
GFM1--AP000547.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GFM1^ENSG00000168827.15	chr3:158646947:+	AP000547.1^ENSG00000233995.1	chr22:16574465:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1480:1121:3172	.	YES_LDAS	0.0017	GT	1.9329	AG	1.9219	"[""INTERCHROMOSOMAL[chr3--chr22]""]"	chr3:158646947-chr22:16574465	False			0	Read count too low: 1 < 8	FAIL	1
GEN1--MFSD8	1	0	1.0	0.0	ONLY_REF_SPLICE	GEN1^ENSG00000178295.15	chr2:17753967:+	MFSD8^ENSG00000164073.11	chr4:127933093:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2360:51538:6479	.	YES_LDAS	0.0034	GT	1.6402	AG	1.7968	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:17753967-chr4:127933093	False			0	Read count too low: 1 < 8	FAIL	1
GDF7--RUFY3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GDF7^ENSG00000143869.7	chr2:20674474:+	RUFY3^ENSG00000018189.13	chr4:70704894:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1420:10190:9884	.	NO_LDAS	0.0034	GT	1.6895	AG	1.7056	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:20674474-chr4:70704894	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GDAP1--MIR2052HG	1	0	1.0	0.0	ONLY_REF_SPLICE	GDAP1^ENSG00000104381.14	chr8:74363053:+	MIR2052HG^ENSG00000254349.6	chr8:74702379:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:31839:24513	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9899	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.08Mb]"",""NEIGHBORS[81768]""]"	chr8:74363053-chr8:74702379	False			0	Read count too low: 1 < 8	FAIL	1
GCSH--CLYBL	1	0	1.0	0.0	ONLY_REF_SPLICE	GCSH^ENSG00000140905.11	chr16:81096131:-	CLYBL^ENSG00000125246.15	chr13:99772824:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1142:32268:9001	.	YES_LDAS	0.0034	GT	1.5301	AG	1.9899	"[""INTERCHROMOSOMAL[chr16--chr13]""]"	chr16:81096131-chr13:99772824	False			0	Read count too low: 1 < 8	FAIL	1
GCOM2--AC084824.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	GCOM2^ENSG00000227725.3	chr4:68038685:+	AC084824.1^ENSG00000257511.1	chr12:32726636:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2486:34549:24975	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr12]""]"	chr4:68038685-chr12:32726636	False			0	Read count too low: 1 < 8	FAIL	1
GATA2-AS1--ZFYVE21	1	0	1.0	0.0	ONLY_REF_SPLICE	GATA2-AS1^ENSG00000244300.3	chr3:128490069:+	ZFYVE21^ENSG00000100711.14	chr14:103726792:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:5911:23882	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr3--chr14]""]"	chr3:128490069-chr14:103726792	False			0	Read count too low: 1 < 8	FAIL	1
GATA2-AS1--UBE2J2	1	0	1.0	0.0	ONLY_REF_SPLICE	GATA2-AS1^ENSG00000244300.3	chr3:128490069:+	UBE2J2^ENSG00000160087.21	chr1:1267992:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:41976:2247	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8256	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:128490069-chr1:1267992	False			0	Read count too low: 1 < 8	FAIL	1
GARNL3--SCAI	1	0	1.0	0.0	ONLY_REF_SPLICE	GARNL3^ENSG00000136895.19	chr9:127357377:+	SCAI^ENSG00000173611.18	chr9:125056007:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2219:23757:29627	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9219	"[""INTRACHROMOSOMAL[chr9:2.08Mb]""]"	chr9:127357377-chr9:125056007	False			0	Read count too low: 1 < 8	FAIL	1
GAREM1--AC011825.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GAREM1^ENSG00000141441.16	chr18:32287031:-	AC011825.2^ENSG00000263393.1	chr18:32124154:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2317:7957:12658	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8323	"[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""NEIGHBORS[399]""]"	chr18:32287031-chr18:32124154	False			0	Read count too low: 1 < 8	FAIL	1
GALNS--GMEB2	1	0	1.0	0.0	ONLY_REF_SPLICE	GALNS^ENSG00000141012.13	chr16:88856758:-	GMEB2^ENSG00000101216.11	chr20:63619454:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:32559:20575	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr20]""]"	chr16:88856758-chr20:63619454	False			0	Read count too low: 1 < 8	FAIL	1
GALK2--FGF7	1	0	1.0	0.0	ONLY_REF_SPLICE	GALK2^ENSG00000156958.15	chr15:49217313:+	FGF7^ENSG00000140285.12	chr15:49483151:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1357:51692:25157	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7968	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr15:0.06Mb]"",""NEIGHBORS[55368]""]"	chr15:49217313-chr15:49483151	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
GALK2--COPS2	1	0	1.0	0.0	ONLY_REF_SPLICE	GALK2^ENSG00000156958.15	chr15:49170358:+	COPS2^ENSG00000166200.15	chr15:49137437:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2177:24663:12280	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9329	"[""INTRACHROMOSOMAL[chr15:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[5]""]"	chr15:49170358-chr15:49137437	False			0	Read count too low: 1 < 8	FAIL	1
GACAT2--LCMT2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GACAT2^ENSG00000265962.1	chr18:8707539:-	LCMT2^ENSG00000168806.8	chr15:43326756:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2129:8904:5974	.	NO_LDAS	0.0034	GT	1.4566	AG	1.7056	"[""INTERCHROMOSOMAL[chr18--chr15]""]"	chr18:8707539-chr15:43326756	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
GABARAPL1--CNOT11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	GABARAPL1^ENSG00000139112.11	chr12:10221893:+	CNOT11^ENSG00000158435.8	chr2:101266771:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1153:47793:19104	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:10221893-chr2:101266771	False			0	Read count too low: 1 < 8	FAIL	1
G2E3-AS1--ADAP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	G2E3-AS1^ENSG00000257636.6	chr14:30492717:-	ADAP2^ENSG00000184060.11	chr17:30953288:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1211:20173:1476	.	NO_LDAS	0.0034	GT	1.9329	AG	1.6895	"[""INTERCHROMOSOMAL[chr14--chr17]""]"	chr14:30492717-chr17:30953288	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FYCO1--ZNF618	1	0	1.0	0.0	ONLY_REF_SPLICE	FYCO1^ENSG00000163820.15	chr3:45931071:-	ZNF618^ENSG00000157657.14	chr9:114001996:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1486:11897:22761	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr3--chr9]""]"	chr3:45931071-chr9:114001996	False			0	Read count too low: 1 < 8	FAIL	1
FXN--CBWD6	1	0	0.5	0.0	ONLY_REF_SPLICE	FXN^ENSG00000165060.15	chr9:69043561:+	CBWD6^ENSG00000215126.10	chr9:41156439:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:35051:22985	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr9:27.84Mb]""]"	chr9:69043561-chr9:41156439	False			0	Read count too low: 1 < 8	FAIL	1
FUT8--TMX4	1	0	1.0	0.0	ONLY_REF_SPLICE	FUT8^ENSG00000033170.17	chr14:65455718:+	TMX4^ENSG00000125827.9	chr20:8010315:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2439:25610:2513	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr20]""]"	chr14:65455718-chr20:8010315	False			0	Read count too low: 1 < 8	FAIL	1
FUT8--RIC8B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FUT8^ENSG00000033170.17	chr14:65629606:+	RIC8B^ENSG00000111785.21	chr12:106815230:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1214:49856:21332	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr14--chr12]""]"	chr14:65629606-chr12:106815230	False			0	Read count too low: 1 < 8	FAIL	1
FSIP1--ARHGEF5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FSIP1^ENSG00000150667.8	chr15:39782628:-	ARHGEF5^ENSG00000050327.15	chr7:144362676:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1390:38432:16960	.	NO_LDAS	0.0034	GT	1.4566	AG	1.7465	"[""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:39782628-chr7:144362676	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FP565260.3--ATP5F1E	1	0	0.5	0.0	INCL_NON_REF_SPLICE	FP565260.3^ENSG00000277117.5	chr21:5036720:+	ATP5F1E^ENSG00000124172.10	chr20:59030429:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:39039:2822	.	NO_LDAS	0.0017	GT	1.9899	AG	1.8062	"[""INTERCHROMOSOMAL[chr21--chr20]""]"	chr21:5036720-chr20:59030429	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FOXO1--LINC00598	1	0	1.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40470162:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1211:38570:6689	.	YES_LDAS	0.0034	GT	1.7232	AG	1.8295	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40470162	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FOXO1--LINC00598	1	0	1.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40460406:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1476:4916:2794	.	YES_LDAS	0.0034	GT	1.7232	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40460406	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FOXO1--LINC00598	1	0	1.0	0.0	ONLY_REF_SPLICE	FOXO1^ENSG00000150907.10	chr13:40665583:-	LINC00598^ENSG00000215483.11	chr13:40097967:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1304:32082:13387	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9656	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr13:0.02Mb]"",""NEIGHBORS[19860]""]"	chr13:40665583-chr13:40097967	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FOXN3--DCTD	1	0	1.0	0.0	ONLY_REF_SPLICE	FOXN3^ENSG00000053254.16	chr14:89411934:-	DCTD^ENSG00000129187.15	chr4:182915575:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2168:10926:21864	.	NO_LDAS	0.0034	GT	1.5628	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr4]""]"	chr14:89411934-chr4:182915575	False			0	Read count too low: 1 < 8	FAIL	1
FO393418.1--NRG1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FO393418.1^ENSG00000223695.1	chr22:36396215:+	NRG1^ENSG00000157168.20	chr8:32763748:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1491:20853:4391	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr22--chr8]""]"	chr22:36396215-chr8:32763748	False			0	Read count too low: 1 < 8	FAIL	1
FNTA--STAU2	1	0	1.0	0.0	ONLY_REF_SPLICE	FNTA^ENSG00000168522.13	chr8:43064215:+	STAU2^ENSG00000040341.18	chr8:73617451:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1314:8774:21052	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chr8:30.33Mb]""]"	chr8:43064215-chr8:73617451	False			0	Read count too low: 1 < 8	FAIL	1
FNBP1L--RPAP2	1	0	1.0	0.0	ONLY_REF_SPLICE	FNBP1L^ENSG00000137942.18	chr1:93499583:+	RPAP2^ENSG00000122484.9	chr1:92323445:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1129:18393:21878	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:1.05Mb]""]"	chr1:93499583-chr1:92323445	False			0	Read count too low: 1 < 8	FAIL	1
FNBP1L--PINX1	1	0	1.0	0.0	ONLY_REF_SPLICE	FNBP1L^ENSG00000137942.18	chr1:93448305:+	PINX1^ENSG00000254093.9	chr8:10826244:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1405:29655:19945	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr8]""]"	chr1:93448305-chr8:10826244	False			0	Read count too low: 1 < 8	FAIL	1
FNBP1L--DNTTIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	FNBP1L^ENSG00000137942.18	chr1:93499583:+	DNTTIP2^ENSG00000067334.14	chr1:93873214:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1124:40576:15040	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.31Mb]""]"	chr1:93499583-chr1:93873214	False			0	Read count too low: 1 < 8	FAIL	1
FGGY--C11orf80	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FGGY^ENSG00000172456.18	chr1:59378837:+	C11orf80^ENSG00000173715.18	chr11:66815758:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1243:18474:7782	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:59378837-chr11:66815758	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
FGFR1OP2--NELFCD	1	0	1.0	0.0	ONLY_REF_SPLICE	FGFR1OP2^ENSG00000111790.14	chr12:26957743:+	NELFCD^ENSG00000101158.15	chr20:58991881:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1296:18256:28394	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:26957743-chr20:58991881	False			0	Read count too low: 1 < 8	FAIL	1
FGF7P3--ZNF23	1	0	1.0	0.0	ONLY_REF_SPLICE	FGF7P3^ENSG00000204837.5	chr9:39830013:-	ZNF23^ENSG00000167377.18	chr16:71449882:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2311:4244:20715	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr16]""]"	chr9:39830013-chr16:71449882	False			0	Read count too low: 1 < 8	FAIL	1
FGD4--INTS13	1	0	1.0	0.0	ONLY_REF_SPLICE	FGD4^ENSG00000139132.15	chr12:32399959:+	INTS13^ENSG00000064102.15	chr12:26928905:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:2529:3844	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chr12:5.46Mb]""]"	chr12:32399959-chr12:26928905	False			0	Read count too low: 1 < 8	FAIL	1
FEZ1--C11orf98	1	0	1.0	0.0	ONLY_REF_SPLICE	FEZ1^ENSG00000149557.14	chr11:125463484:-	C11orf98^ENSG00000278615.5	chr11:62664973:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2221:33044:7011	.	YES_LDAS	0.0034	GT	1.9086	AG	1.5628	"[""INTRACHROMOSOMAL[chr11:62.78Mb]""]"	chr11:125463484-chr11:62664973	False			0	Read count too low: 1 < 8	FAIL	1
FER1L5--RPS12P5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FER1L5^ENSG00000249715.13	chr2:96647886:+	RPS12P5^ENSG00000226216.1	chr3:29390908:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:32608:10514	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:96647886-chr3:29390908	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FEN1--AC006122.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	FEN1^ENSG00000168496.4	chr11:61796333:+	AC006122.1^ENSG00000213970.4	chr12:4324623:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:6364:21276	.	YES_LDAS	0.0008	GT	1.8892	AG	1.5219	"[""INTERCHROMOSOMAL[chr11--chr12]""]"	chr11:61796333-chr12:4324623	False			0	Read count too low: 1 < 8	FAIL	1
FEM1C--DCP2	1	0	1.0	0.0	ONLY_REF_SPLICE	FEM1C^ENSG00000145780.8	chr5:115542950:-	DCP2^ENSG00000172795.17	chr5:112985835:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2206:50300:23364	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8295	"[""INTRACHROMOSOMAL[chr5:2.50Mb]""]"	chr5:115542950-chr5:112985835	False			0	Read count too low: 1 < 8	FAIL	1
FEM1C--CCDC112	1	0	1.0	0.0	ONLY_REF_SPLICE	FEM1C^ENSG00000145780.8	chr5:115542950:-	CCDC112^ENSG00000164221.13	chr5:115284908:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2391:15004:19678	.	YES_LDAS	0.0034	GT	1.6402	AG	1.6895	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.22Mb]""]"	chr5:115542950-chr5:115284908	False			0	Read count too low: 1 < 8	FAIL	1
FDPSP5--GAL3ST1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FDPSP5^ENSG00000215035.2	chrX:44476198:-	GAL3ST1^ENSG00000128242.13	chr22:30557401:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1230:51385:27623	.	NO_LDAS	0.0034	GT	1.3996	AG	1.8323	"[""INTERCHROMOSOMAL[chrX--chr22]""]"	chrX:44476198-chr22:30557401	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FCN3--CD164L2	1	0	1.0	0.0	ONLY_REF_SPLICE	FCN3^ENSG00000142748.13	chr1:27370596:-	CD164L2^ENSG00000174950.11	chr1:27382399:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:6979:24751	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[4352]""]"	chr1:27370596-chr1:27382399	False			0	Read count too low: 1 < 8	FAIL	1
FCHO1--RNF167	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FCHO1^ENSG00000130475.14	chr19:17783101:+	RNF167^ENSG00000108523.16	chr17:4940749:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:27293:17535	.	YES_LDAS	0.0034	GT	1.1589	AG	1.5058	"[""INTERCHROMOSOMAL[chr19--chr17]""]"	chr19:17783101-chr17:4940749	False			0	Read count too low: 1 < 8	FAIL	1
FBXO24--GZF1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FBXO24^ENSG00000106336.13	chr7:100584777:+	GZF1^ENSG00000125812.16	chr20:23364363:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1496:50665:16568	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr20]""]"	chr7:100584777-chr20:23364363	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FBN1--AC084757.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FBN1^ENSG00000166147.14	chr15:48610728:-	AC084757.2^ENSG00000259469.1	chr15:48729540:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:3055:23167	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTRACHROMOSOMAL[chr15:0.08Mb]"",""LOCAL_REARRANGEMENT:-:[83359]""]"	chr15:48610728-chr15:48729540	False			0	Read count too low: 1 < 8	FAIL	1
FARS2--AC093249.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FARS2^ENSG00000145982.13	chr6:5368846:+	AC093249.2^ENSG00000260167.1	chr16:30585922:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1144:11250:28590	.	NO_LDAS	0.0034	GT	1.8323	AG	1.6895	"[""INTERCHROMOSOMAL[chr6--chr16]""]"	chr6:5368846-chr16:30585922	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FAR2P1--DTNB	1	0	1.0	0.0	ONLY_REF_SPLICE	FAR2P1^ENSG00000180178.11	chr2:130028309:-	DTNB^ENSG00000138101.19	chr2:25628384:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1324:43448:16736	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7232	"[""INTRACHROMOSOMAL[chr2:104.34Mb]""]"	chr2:130028309-chr2:25628384	False			0	Read count too low: 1 < 8	FAIL	1
FANCD2--UBE3D	1	0	1.0	0.0	ONLY_REF_SPLICE	FANCD2^ENSG00000144554.12	chr3:10032423:+	UBE3D^ENSG00000118420.17	chr6:83024038:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1377:47598:8398	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chr3--chr6]""]"	chr3:10032423-chr6:83024038	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FANCC--AOPEP	1	0	1.0	0.0	ONLY_REF_SPLICE	FANCC^ENSG00000158169.13	chr9:95135346:-	AOPEP^ENSG00000148120.17	chr9:94792765:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1231:36790:23111	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr9:0.01Mb]"",""LOCAL_INVERSION:-:+:[11895]""]"	chr9:95135346-chr9:94792765	False			0	Read count too low: 1 < 8	FAIL	1
FAM86DP--LINC02014	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM86DP^ENSG00000244026.6	chr3:75426450:-	LINC02014^ENSG00000248243.1	chr3:130090818:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1430:24437:8721	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:54.65Mb]""]"	chr3:75426450-chr3:130090818	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FAM219B--BEND7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM219B^ENSG00000178761.15	chr15:74900217:-	BEND7^ENSG00000165626.17	chr10:13452658:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1185:45155:5680	.	YES_LDAS	0.0034	GC	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr10]""]"	chr15:74900217-chr10:13452658	False			0	Read count too low: 1 < 8	FAIL	1
FAM20C--PRKAR1B	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM20C^ENSG00000177706.9	chr7:208976:+	PRKAR1B^ENSG00000188191.15	chr7:711527:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2345:38263:17254	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr7:0.29Mb]""]"	chr7:208976-chr7:711527	False			0	Read count too low: 1 < 8	FAIL	1
FAM20C--AC091390.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM20C^ENSG00000177706.9	chr7:197583:+	AC091390.3^ENSG00000239969.5	chr7:102366018:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2302:43230:4475	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTRACHROMOSOMAL[chr7:102.10Mb]""]"	chr7:197583-chr7:102366018	False			0	Read count too low: 1 < 8	FAIL	1
FAM177A1--PRORP	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM177A1^ENSG00000151327.13	chr14:35102729:+	PRORP^ENSG00000100890.16	chr14:35122952:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1397:49079:3788	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9329	"[""INTRACHROMOSOMAL[chr14:0.01Mb]"",""NEIGHBORS[8716]""]"	chr14:35102729-chr14:35122952	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
FAM172A--DEPDC1B	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM172A^ENSG00000113391.19	chr5:94050731:-	DEPDC1B^ENSG00000035499.13	chr5:60687227:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2494:9883:10052	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:32.92Mb]""]"	chr5:94050731-chr5:60687227	False			0	Read count too low: 1 < 8	FAIL	1
FAM149B1--AC008267.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM149B1^ENSG00000138286.15	chr10:73168386:+	AC008267.3^ENSG00000234500.1	chr7:66520992:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1339:30051:26404	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr10--chr7]""]"	chr10:73168386-chr7:66520992	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FAM13A--LINC01997	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM13A^ENSG00000138640.15	chr4:88938088:-	LINC01997^ENSG00000241383.2	chr3:169005995:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:27074:27749	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9086	"[""INTERCHROMOSOMAL[chr4--chr3]""]"	chr4:88938088-chr3:169005995	False			0	Read count too low: 1 < 8	FAIL	1
FAM135A--BCKDHB	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM135A^ENSG00000082269.17	chr6:70502791:+	BCKDHB^ENSG00000083123.15	chr6:80273135:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2357:32721:29431	.	NO_LDAS	0.0034	GT	1.9899	AG	1.8892	"[""INTRACHROMOSOMAL[chr6:9.55Mb]""]"	chr6:70502791-chr6:80273135	False			0	Read count too low: 1 < 8	FAIL	1
FAM126A--SEC11A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	FAM126A^ENSG00000122591.13	chr7:22938280:-	SEC11A^ENSG00000140612.14	chr15:84680832:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1305:50608:24316	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr15]""]"	chr7:22938280-chr15:84680832	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
FAM114A2--FBXO9	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM114A2^ENSG00000055147.19	chr5:154038857:-	FBXO9^ENSG00000112146.17	chr6:53076486:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2217:42979:18221	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9656	"[""INTERCHROMOSOMAL[chr5--chr6]""]"	chr5:154038857-chr6:53076486	False			0	Read count too low: 1 < 8	FAIL	1
FAM107B--STAM	1	0	1.0	0.0	ONLY_REF_SPLICE	FAM107B^ENSG00000065809.14	chr10:14604240:-	STAM^ENSG00000136738.15	chr10:17700191:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2325:49047:24358	.	YES_LDAS	0.0034	GT	1.6895	AG	1.5546	"[""INTRACHROMOSOMAL[chr10:2.87Mb]""]"	chr10:14604240-chr10:17700191	False			0	Read count too low: 1 < 8	FAIL	1
FAH--ZFAND6	1	0	1.0	0.0	ONLY_REF_SPLICE	FAH^ENSG00000103876.13	chr15:80168316:+	ZFAND6^ENSG00000086666.19	chr15:80120328:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1437:3039:28884	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14097]""]"	chr15:80168316-chr15:80120328	False			0	Read count too low: 1 < 8	FAIL	1
EXT1--FAM210B	1	0	0.5	0.0	INCL_NON_REF_SPLICE	EXT1^ENSG00000182197.12	chr8:118110541:-	FAM210B^ENSG00000124098.10	chr20:56365087:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1183:32478:20183	.	NO_LDAS	0.0017	GT	1.8892	AG	1.4566	"[""INTERCHROMOSOMAL[chr8--chr20]""]"	chr8:118110541-chr20:56365087	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EXOC4--LRGUK	1	0	1.0	0.0	ONLY_REF_SPLICE	EXOC4^ENSG00000131558.15	chr7:134007835:+	LRGUK^ENSG00000155530.3	chr7:134191655:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1219:39096:1434	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9219	"[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]"	chr7:134007835-chr7:134191655	False			0	Read count too low: 1 < 8	FAIL	1
EXOC4--LRGUK	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EXOC4^ENSG00000131558.15	chr7:134007835:+	LRGUK^ENSG00000155530.3	chr7:134158022:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2233:49880:7362	.	NO_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[60710]""]"	chr7:134007835-chr7:134158022	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EXOC2--CCDC66	1	0	1.0	0.0	ONLY_REF_SPLICE	EXOC2^ENSG00000112685.14	chr6:572520:-	CCDC66^ENSG00000180376.17	chr3:56618172:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:46037:20659	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:572520-chr3:56618172	False			0	Read count too low: 1 < 8	FAIL	1
EXOC1--DNTTIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	EXOC1^ENSG00000090989.18	chr4:55899884:+	DNTTIP2^ENSG00000067334.14	chr1:93873214:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2422:2149:13527	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:55899884-chr1:93873214	False			0	Read count too low: 1 < 8	FAIL	1
EVI5L--IPO11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EVI5L^ENSG00000142459.8	chr19:7863067:+	IPO11^ENSG00000086200.17	chr5:62403995:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:2343:18151	.	NO_LDAS	0.0034	GT	1.8892	AG	1.3996	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:7863067-chr5:62403995	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ERVK13-1--TOR1B	1	0	1.0	0.0	ONLY_REF_SPLICE	ERVK13-1^ENSG00000260565.7	chr16:2682140:-	TOR1B^ENSG00000136816.16	chr9:129808905:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2434:20052:26741	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7465	"[""INTERCHROMOSOMAL[chr16--chr9]""]"	chr16:2682140-chr9:129808905	False			0	Read count too low: 1 < 8	FAIL	1
ERLIN1--LINC01297	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ERLIN1^ENSG00000107566.14	chr10:100167348:-	LINC01297^ENSG00000274827.4	chr14:19384391:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1293:25278:22173	.	NO_LDAS	0.0034	GT	1.4295	AG	1.5329	"[""INTERCHROMOSOMAL[chr10--chr14]""]"	chr10:100167348-chr14:19384391	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ERH--CA13	1	0	1.0	0.0	ONLY_REF_SPLICE	ERH^ENSG00000100632.11	chr14:69386963:-	CA13^ENSG00000185015.8	chr8:85281230:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1230:29307:18557	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr8]""]"	chr14:69386963-chr8:85281230	False			0	Read count too low: 1 < 8	FAIL	1
ERFE--RECQL	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ERFE^ENSG00000178752.16	chr2:238167725:+	RECQL^ENSG00000004700.16	chr12:21483574:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:1728:7109	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8256	"[""INTERCHROMOSOMAL[chr2--chr12]""]"	chr2:238167725-chr12:21483574	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EPHA1--AC008132.1	1	0	0.06	0.0	INCL_NON_REF_SPLICE	EPHA1^ENSG00000146904.9	chr7:143390635:-	AC008132.1^ENSG00000161103.11	chr22:18847398:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:1825:1645	.	NO_LDAS	0.0002	GT	1.8256	AG	1.7968	"[""INTERCHROMOSOMAL[chr7--chr22]""]"	chr7:143390635-chr22:18847398	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
EPB41L5--PTPN4	1	0	1.0	0.0	ONLY_REF_SPLICE	EPB41L5^ENSG00000115109.14	chr2:120042110:+	PTPN4^ENSG00000088179.9	chr2:119920069:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1272:47461:28618	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8295	"[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]"	chr2:120042110-chr2:119920069	False			0	Read count too low: 1 < 8	FAIL	1
EPB41L5--PTPN4	1	0	1.0	0.0	ONLY_REF_SPLICE	EPB41L5^ENSG00000115109.14	chr2:120019264:+	PTPN4^ENSG00000088179.9	chr2:119932424:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1296:14017:23826	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""DEEPEST2019"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[28178]""]"	chr2:120019264-chr2:119932424	False			0	Read count too low: 1 < 8	FAIL	1
EML1--GFY	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EML1^ENSG00000066629.18	chr14:99920877:+	GFY^ENSG00000261949.7	chr19:49423870:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:33902:16484	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7968	"[""INTERCHROMOSOMAL[chr14--chr19]""]"	chr14:99920877-chr19:49423870	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ELP2--CMAS	1	0	1.0	0.0	ONLY_REF_SPLICE	ELP2^ENSG00000134759.14	chr18:36141201:+	CMAS^ENSG00000111726.13	chr12:22060832:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2109:7949:7039	.	YES_LDAS	0.0034	GT	1.7232	AG	1.7056	"[""INTERCHROMOSOMAL[chr18--chr12]""]"	chr18:36141201-chr12:22060832	False			0	Read count too low: 1 < 8	FAIL	1
ELOVL2-AS1--SYCP2L	1	0	1.0	0.0	ONLY_REF_SPLICE	ELOVL2-AS1^ENSG00000230314.7	chr6:11047999:+	SYCP2L^ENSG00000153157.13	chr6:10956136:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:42308:3550	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTRACHROMOSOMAL[chr6:0.06Mb]"",""LOCAL_REARRANGEMENT:+:[64162]""]"	chr6:11047999-chr6:10956136	False			0	Read count too low: 1 < 8	FAIL	1
ELOC--MKRN3	1	0	1.0	0.0	ONLY_REF_SPLICE	ELOC^ENSG00000154582.17	chr8:73972077:-	MKRN3^ENSG00000179455.10	chr15:23566808:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1218:17172:12812	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr15]""]"	chr8:73972077-chr15:23566808	False			0	Read count too low: 1 < 8	FAIL	1
ELOA--ZNF165	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ELOA^ENSG00000011007.12	chr1:23749077:+	ZNF165^ENSG00000197279.4	chr6:28085616:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:19769:18740	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:23749077-chr6:28085616	False			0	Read count too low: 1 < 8	FAIL	1
ELAC1--SMAD4	1	0	1.0	0.0	ONLY_REF_SPLICE	ELAC1^ENSG00000141642.9	chr18:50974561:+	SMAD4^ENSG00000141646.14	chr18:51046920:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2365:22997:26937	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""ChimerSeq"",""INTRACHROMOSOMAL[chr18:0.04Mb]"",""NEIGHBORS[40273]""]"	chr18:50974561-chr18:51046920	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
EIF4E2--AC009075.2	1	0	0.25	0.0	INCL_NON_REF_SPLICE	EIF4E2^ENSG00000135930.14	chr2:232558018:+	AC009075.2^ENSG00000261774.1	chr16:72278298:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:12431:6591	.	NO_LDAS	0.0008	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:232558018-chr16:72278298	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EIF2AK3--SAMD3	1	0	1.0	0.0	ONLY_REF_SPLICE	EIF2AK3^ENSG00000172071.14	chr2:88613724:-	SAMD3^ENSG00000164483.17	chr6:130184623:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:5417:15517	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:88613724-chr6:130184623	False			0	Read count too low: 1 < 8	FAIL	1
EFR3B--H2AC4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EFR3B^ENSG00000084710.14	chr2:25146569:+	H2AC4^ENSG00000278463.2	chr6:26033576:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:2990:20533	.	NO_LDAS	0.0034	GT	1.8295	AG	1.8062	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:25146569-chr6:26033576	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EFCAB2--KIF26B	1	0	1.0	0.0	ONLY_REF_SPLICE	EFCAB2^ENSG00000203666.12	chr1:245083688:+	KIF26B^ENSG00000162849.16	chr1:245366834:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2455:21597:19328	.	YES_LDAS	0.0034	GT	1.7465	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""NEIGHBORS[27821]""]"	chr1:245083688-chr1:245366834	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
EEF1AKMT3--TSFM	1	0	1.0	0.0	ONLY_REF_SPLICE	EEF1AKMT3^ENSG00000123427.17	chr12:57773128:+	TSFM^ENSG00000123297.20	chr12:57783110:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:49613:23153	.	YES_LDAS	0.0034	GT	1.7968	AG	1.5656	"[""INTRACHROMOSOMAL[chr12:0.00Mb]"",""NEIGHBORS[220]""]"	chr12:57773128-chr12:57783110	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
EEF1AKMT2--AL121769.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EEF1AKMT2^ENSG00000203791.15	chr10:124789043:-	AL121769.1^ENSG00000242163.1	chr14:81332990:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1280:33837:5022	.	NO_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr14]""]"	chr10:124789043-chr14:81332990	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
EEF1AKMT1--INTS4	1	0	1.0	0.0	ONLY_REF_SPLICE	EEF1AKMT1^ENSG00000150456.11	chr13:20757455:-	INTS4^ENSG00000149262.17	chr11:77961138:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1229:28474:14116	.	NO_LDAS	0.0034	GT	1.5058	AG	1.9656	"[""INTERCHROMOSOMAL[chr13--chr11]""]"	chr13:20757455-chr11:77961138	False			0	Read count too low: 1 < 8	FAIL	1
EEA1--TMEM258	1	0	1.0	0.0	ONLY_REF_SPLICE	EEA1^ENSG00000102189.17	chr12:92832512:-	TMEM258^ENSG00000134825.16	chr11:61790602:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1414:39241:6843	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8892	"[""INTERCHROMOSOMAL[chr12--chr11]""]"	chr12:92832512-chr11:61790602	False			0	Read count too low: 1 < 8	FAIL	1
EDRF1-DT--FRA10AC1	1	0	1.0	0.0	ONLY_REF_SPLICE	EDRF1-DT^ENSG00000224023.10	chr10:125719422:-	FRA10AC1^ENSG00000148690.12	chr10:93700106:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2155:30205:4783	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr10:32.00Mb]""]"	chr10:125719422-chr10:93700106	False			0	Read count too low: 1 < 8	FAIL	1
EAF1--PPP2R5E	1	0	1.0	0.0	INCL_NON_REF_SPLICE	EAF1^ENSG00000144597.14	chr3:15432195:+	PPP2R5E^ENSG00000154001.14	chr14:63374243:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2271:49758:2724	.	NO_LDAS	0.0034	GT	1.9219	AG	1.8323	"[""INTERCHROMOSOMAL[chr3--chr14]""]"	chr3:15432195-chr14:63374243	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DYNC1I2--ICE2	1	0	0.5	0.0	ONLY_REF_SPLICE	DYNC1I2^ENSG00000077380.16	chr2:171692894:+	ICE2^ENSG00000128915.12	chr15:60478069:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1122:27859:23588	.	YES_LDAS	0.0017	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr2--chr15]""]"	chr2:171692894-chr15:60478069	False			0	Read count too low: 1 < 8	FAIL	1
DVL2--POLD4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DVL2^ENSG00000004975.12	chr17:7230316:-	POLD4^ENSG00000175482.9	chr11:67352709:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2141:7707:12588	.	NO_LDAS	0.0034	GC	1.5656	AG	1.7232	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:7230316-chr11:67352709	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DUS3L--AP001324.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DUS3L^ENSG00000141994.16	chr19:5788357:-	AP001324.3^ENSG00000279353.1	chr11:74699256:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1114:49831:25381	.	NO_LDAS	0.0034	GT	1.4256	AG	1.8323	"[""INTERCHROMOSOMAL[chr19--chr11]""]"	chr19:5788357-chr11:74699256	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DTX4--DTX2P1	1	0	1.0	0.0	ONLY_REF_SPLICE	DTX4^ENSG00000110042.8	chr11:59172806:+	DTX2P1^ENSG00000186704.9	chr7:76980621:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1103:33506:5484	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chr7]""]"	chr11:59172806-chr7:76980621	False			0	Read count too low: 1 < 8	FAIL	1
DTX2P1--TNFRSF11A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DTX2P1^ENSG00000186704.9	chr7:77002321:+	TNFRSF11A^ENSG00000141655.17	chr18:62389144:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:4883:28744	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr7--chr18]""]"	chr7:77002321-chr18:62389144	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DTWD2--TNFAIP8	1	0	1.0	0.0	ONLY_REF_SPLICE	DTWD2^ENSG00000169570.10	chr5:118988294:-	TNFAIP8^ENSG00000145779.8	chr5:119392816:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2482:8588:20561	.	YES_LDAS	0.0034	GT	1.8323	AG	1.9899	"[""INTRACHROMOSOMAL[chr5:0.28Mb]""]"	chr5:118988294-chr5:119392816	False			0	Read count too low: 1 < 8	FAIL	1
DTWD2--TAB1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DTWD2^ENSG00000169570.10	chr5:118839037:-	TAB1^ENSG00000100324.14	chr22:39426703:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:44265:17815	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr22]""]"	chr5:118839037-chr22:39426703	False			0	Read count too low: 1 < 8	FAIL	1
DTWD1--SEC62	1	0	1.0	0.0	ONLY_REF_SPLICE	DTWD1^ENSG00000104047.15	chr15:49625431:+	SEC62^ENSG00000008952.17	chr3:169982707:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:14543:14144	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr3]""]"	chr15:49625431-chr3:169982707	False			0	Read count too low: 1 < 8	FAIL	1
DTNB--DNMT3A	1	0	1.0	0.0	ONLY_REF_SPLICE	DTNB^ENSG00000138101.19	chr2:25652594:-	DNMT3A^ENSG00000119772.17	chr2:25282711:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:19486:24499	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7968	"[""INTRACHROMOSOMAL[chr2:0.03Mb]"",""NEIGHBORS[34608]""]"	chr2:25652594-chr2:25282711	False			0	Read count too low: 1 < 8	FAIL	1
DTD2--G2E3	1	0	1.0	0.0	ONLY_REF_SPLICE	DTD2^ENSG00000129480.13	chr14:31457283:-	G2E3^ENSG00000092140.16	chr14:30601770:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1330:3476:15993	.	YES_LDAS	0.0034	GT	1.7232	AG	1.5546	"[""INTRACHROMOSOMAL[chr14:0.83Mb]""]"	chr14:31457283-chr14:30601770	False			0	Read count too low: 1 < 8	FAIL	1
DSTN--AC073840.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DSTN^ENSG00000125868.16	chr20:17601042:+	AC073840.1^ENSG00000286035.1	chr4:83084051:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2161:2707:28142	.	NO_LDAS	0.0034	GT	1.053	AG	1.9329	"[""INTERCHROMOSOMAL[chr20--chr4]""]"	chr20:17601042-chr4:83084051	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DRC3--YRDC	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DRC3^ENSG00000171962.18	chr17:17993823:+	YRDC^ENSG00000196449.4	chr1:37808148:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1434:51287:28156	.	NO_LDAS	0.0034	GC	1.6402	AG	1.3996	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:17993823-chr1:37808148	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DRAM1--MREG	1	0	1.0	0.0	ONLY_REF_SPLICE	DRAM1^ENSG00000136048.14	chr12:101890221:+	MREG^ENSG00000118242.16	chr2:215996465:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1197:50244:15979	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:101890221-chr2:215996465	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DRAM1--AC079907.1	1	0	1.0	0.0	ONLY_REF_SPLICE	DRAM1^ENSG00000136048.14	chr12:101901433:+	AC079907.1^ENSG00000257222.1	chr12:102074408:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1412:19777:2752	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTRACHROMOSOMAL[chr12:0.05Mb]"",""NEIGHBORS[51225]""]"	chr12:101901433-chr12:102074408	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DPM1--CERNA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DPM1^ENSG00000000419.13	chr20:50945737:-	CERNA1^ENSG00000259577.2	chr15:52205277:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2463:20327:9113	.	NO_LDAS	0.0034	GT	1.7968	AG	1.4256	"[""INTERCHROMOSOMAL[chr20--chr15]""]"	chr20:50945737-chr15:52205277	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DPH6--TRIM67	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DPH6^ENSG00000134146.12	chr15:35373517:-	TRIM67^ENSG00000119283.15	chr1:231197446:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2204:7715:14760	.	NO_LDAS	0.0034	GT	1.7056	AG	1.9219	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:35373517-chr1:231197446	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DPH5--LDHAL6EP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DPH5^ENSG00000117543.21	chr1:100992637:-	LDHAL6EP^ENSG00000270098.1	chr4:71436985:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2426:34582:11719	.	NO_LDAS	0.0034	GT	1.4295	AG	1.1589	"[""INTERCHROMOSOMAL[chr1--chr4]""]"	chr1:100992637-chr4:71436985	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DOK1--CRYBG3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DOK1^ENSG00000115325.14	chr2:74555324:+	CRYBG3^ENSG00000080200.10	chr3:97872545:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2281:23280:13387	.	NO_LDAS	0.0034	GT	1.6402	AG	1.7465	"[""INTERCHROMOSOMAL[chr2--chr3]""]"	chr2:74555324-chr3:97872545	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DNTTIP2--FNBP1L	1	0	1.0	0.0	ONLY_REF_SPLICE	DNTTIP2^ENSG00000067334.14	chr1:93879077:-	FNBP1L^ENSG00000137942.18	chr1:93546842:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:48132:24457	.	YES_LDAS	0.0034	GT	1.9086	AG	1.7968	"[""INTRACHROMOSOMAL[chr1:0.31Mb]""]"	chr1:93879077-chr1:93546842	False			0	Read count too low: 1 < 8	FAIL	1
DNM1L--CPNE2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DNM1L^ENSG00000087470.19	chr12:32707387:+	CPNE2^ENSG00000140848.17	chr16:57110900:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1236:32098:18207	.	NO_LDAS	0.0034	GT	1.5628	AG	1.7968	"[""INTERCHROMOSOMAL[chr12--chr16]""]"	chr12:32707387-chr16:57110900	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DNM1L--AMN1	1	0	1.0	0.0	ONLY_REF_SPLICE	DNM1L^ENSG00000087470.19	chr12:32701562:+	AMN1^ENSG00000151743.11	chr12:31689118:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1438:38457:3690	.	NO_LDAS	0.0034	GT	1.5329	AG	1.8256	"[""INTRACHROMOSOMAL[chr12:0.95Mb]""]"	chr12:32701562-chr12:31689118	False			0	Read count too low: 1 < 8	FAIL	1
DNAL4--DCTD	1	0	1.0	0.0	ONLY_REF_SPLICE	DNAL4^ENSG00000100246.13	chr22:38794068:-	DCTD^ENSG00000129187.15	chr4:182915575:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:33708:20071	.	YES_LDAS	0.0034	GT	1.5058	AG	1.8892	"[""INTERCHROMOSOMAL[chr22--chr4]""]"	chr22:38794068-chr4:182915575	False			0	Read count too low: 1 < 8	FAIL	1
DNAJC22--SDHAP1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	DNAJC22^ENSG00000178401.16	chr12:49351498:+	SDHAP1^ENSG00000185485.14	chr3:195960086:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1180:51595:16610	.	YES_LDAS	0.0017	GT	1.7968	AG	1.8062	"[""INTERCHROMOSOMAL[chr12--chr3]""]"	chr12:49351498-chr3:195960086	False			0	Read count too low: 1 < 8	FAIL	1
DNAJC2--PSMC2	1	0	1.0	0.0	ONLY_REF_SPLICE	DNAJC2^ENSG00000105821.15	chr7:103319609:-	PSMC2^ENSG00000161057.13	chr7:103366076:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1266:47898:16960	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr7:0.02Mb]"",""NEIGHBORS_OVERLAP:-:+:[16260]""]"	chr7:103319609-chr7:103366076	False			0	Read count too low: 1 < 8	FAIL	1
DNAJC19--DNAJC19P5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DNAJC19^ENSG00000205981.8	chr3:180985926:-	DNAJC19P5^ENSG00000225808.1	chr2:177229255:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1366:41296:25059	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr3--chr2]""]"	chr3:180985926-chr2:177229255	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DNAJC17--RAD51	1	0	1.0	0.0	ONLY_REF_SPLICE	DNAJC17^ENSG00000104129.10	chr15:40773727:-	RAD51^ENSG00000051180.17	chr15:40709025:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2128:44524:10332	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTRACHROMOSOMAL[chr15:0.03Mb]"",""LOCAL_INVERSION:-:+:[32821]""]"	chr15:40773727-chr15:40709025	False			0	Read count too low: 1 < 8	FAIL	1
DNAJB11--AC022400.7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DNAJB11^ENSG00000090520.12	chr3:186585483:+	AC022400.7^ENSG00000279689.1	chr10:73769433:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1312:36685:13933	.	YES_LDAS	0.0034	GT	0.9183	AG	1.9656	"[""INTERCHROMOSOMAL[chr3--chr10]""]"	chr3:186585483-chr10:73769433	False			0	Read count too low: 1 < 8	FAIL	1
DNAJA1--SMDT1	1	0	1.0	0.0	ONLY_REF_SPLICE	DNAJA1^ENSG00000086061.16	chr9:33037115:+	SMDT1^ENSG00000183172.9	chr22:42083119:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1311:32187:17745	.	NO_LDAS	0.0034	GT	1.8323	AG	1.6402	"[""INTERCHROMOSOMAL[chr9--chr22]""]"	chr9:33037115-chr22:42083119	False			0	Read count too low: 1 < 8	FAIL	1
DNAJA1--BHLHE41	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DNAJA1^ENSG00000086061.16	chr9:33025387:+	BHLHE41^ENSG00000123095.6	chr12:26124785:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2207:2076:21332	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr12]""]"	chr9:33025387-chr12:26124785	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DNAJA1--ARMC5	1	0	1.0	0.0	ONLY_REF_SPLICE	DNAJA1^ENSG00000086061.16	chr9:33026990:+	ARMC5^ENSG00000140691.18	chr16:31461922:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1279:46547:2597	.	YES_LDAS	0.0034	GT	0.9968	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr16]""]"	chr9:33026990-chr16:31461922	False			0	Read count too low: 1 < 8	FAIL	1
DMTF1--DCDC2B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DMTF1^ENSG00000135164.19	chr7:87171089:+	DCDC2B^ENSG00000222046.2	chr1:32215503:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2352:47598:8707	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:87171089-chr1:32215503	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DMBX1--SEMA7A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DMBX1^ENSG00000197587.11	chr1:46512649:+	SEMA7A^ENSG00000138623.10	chr15:74411680:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:3427:5400	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chr15]""]"	chr1:46512649-chr15:74411680	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DMAC2L--UBE2Q2P1	1	0	0.5	0.0	ONLY_REF_SPLICE	DMAC2L^ENSG00000125375.17	chr14:50322719:+	UBE2Q2P1^ENSG00000189136.9	chr15:84526876:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2441:16630:27511	.	YES_LDAS	0.0017	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr15]""]"	chr14:50322719-chr15:84526876	False			0	Read count too low: 1 < 8	FAIL	1
DHX29--PTCD2	1	0	1.0	0.0	ONLY_REF_SPLICE	DHX29^ENSG00000067248.10	chr5:55274614:-	PTCD2^ENSG00000049883.15	chr5:72358203:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1115:33570:21290	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:17.01Mb]""]"	chr5:55274614-chr5:72358203	False			0	Read count too low: 1 < 8	FAIL	1
DHTKD1--AC008805.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DHTKD1^ENSG00000181192.12	chr10:12091684:+	AC008805.2^ENSG00000267555.1	chr19:32831308:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2452:9753:24653	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:12091684-chr19:32831308	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DHFR--MRPL1	1	0	0.5	0.0	ONLY_REF_SPLICE	DHFR^ENSG00000228716.7	chr5:80654008:-	MRPL1^ENSG00000169288.18	chr4:77871744:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:30351:23504	.	YES_LDAS	0.0017	GT	1.9899	AG	1.8256	"[""INTERCHROMOSOMAL[chr5--chr4]""]"	chr5:80654008-chr4:77871744	False			0	Read count too low: 1 < 8	FAIL	1
DHDDS--AL121970.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DHDDS^ENSG00000117682.17	chr1:26442873:+	AL121970.1^ENSG00000236389.1	chr6:134706498:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1459:39751:21654	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:26442873-chr6:134706498	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DESI2--FLVCR1	1	0	1.0	0.0	ONLY_REF_SPLICE	DESI2^ENSG00000121644.19	chr1:244653355:+	FLVCR1^ENSG00000162769.13	chr1:212863725:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:25213:24723	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:31.75Mb]""]"	chr1:244653355-chr1:212863725	False			0	Read count too low: 1 < 8	FAIL	1
DERL1--NAA20	1	0	1.0	0.0	ONLY_REF_SPLICE	DERL1^ENSG00000136986.10	chr8:123024986:-	NAA20^ENSG00000173418.12	chr20:20025677:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2124:4147:12756	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr8--chr20]""]"	chr8:123024986-chr20:20025677	False			0	Read count too low: 1 < 8	FAIL	1
DEPDC1B--PDE4D	1	0	1.0	0.0	ONLY_REF_SPLICE	DEPDC1B^ENSG00000035499.13	chr5:60638750:-	PDE4D^ENSG00000113448.19	chr5:60185687:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1134:42227:15433	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""Klijn_CellLines"",""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr5:0.07Mb]"",""NEIGHBORS[74792]""]"	chr5:60638750-chr5:60185687	False			0	Read count too low: 1 < 8	FAIL	1
DENND5B--ARNTL2	1	0	1.0	0.0	ONLY_REF_SPLICE	DENND5B^ENSG00000170456.16	chr12:31590706:-	ARNTL2^ENSG00000029153.14	chr12:27368262:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2364:43990:23672	.	YES_LDAS	0.0034	GT	1.7968	AG	1.5656	"[""INTRACHROMOSOMAL[chr12:3.96Mb]""]"	chr12:31590706-chr12:27368262	False			0	Read count too low: 1 < 8	FAIL	1
DENND4A--AQP7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DENND4A^ENSG00000174485.16	chr15:65676445:-	AQP7^ENSG00000165269.13	chr9:33383687:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2363:16581:16750	.	NO_LDAS	0.0034	GT	1.9899	AG	1.7819	"[""INTERCHROMOSOMAL[chr15--chr9]""]"	chr15:65676445-chr9:33383687	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DENND2B--DZIP1L	1	0	1.0	0.0	ONLY_REF_SPLICE	DENND2B^ENSG00000166444.19	chr11:8713998:-	DZIP1L^ENSG00000158163.15	chr3:138068367:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1155:25804:11173	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7465	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:8713998-chr3:138068367	False			0	Read count too low: 1 < 8	FAIL	1
DENND11--NDUFB2	1	0	1.0	0.0	ONLY_REF_SPLICE	DENND11^ENSG00000257093.7	chr7:141685478:-	NDUFB2^ENSG00000090266.13	chr7:140702866:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1362:23474:19160	.	YES_LDAS	0.0034	GT	1.8892	AG	1.3996	"[""INTRACHROMOSOMAL[chr7:0.93Mb]""]"	chr7:141685478-chr7:140702866	False			0	Read count too low: 1 < 8	FAIL	1
DENND10--METTL16	1	0	1.0	0.0	ONLY_REF_SPLICE	DENND10^ENSG00000119979.18	chr10:119108164:+	METTL16^ENSG00000127804.13	chr17:2420904:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1105:40738:15937	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr17]""]"	chr10:119108164-chr17:2420904	False			0	Read count too low: 1 < 8	FAIL	1
DEGS1--NVL	1	0	1.0	0.0	ONLY_REF_SPLICE	DEGS1^ENSG00000143753.13	chr1:224183418:+	NVL^ENSG00000143748.18	chr1:224250318:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1192:9891:26068	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.03Mb]"",""LOCAL_INVERSION:+:-:[33893]""]"	chr1:224183418-chr1:224250318	False			0	Read count too low: 1 < 8	FAIL	1
DEGS1--GPR137B	1	0	1.0	0.0	ONLY_REF_SPLICE	DEGS1^ENSG00000143753.13	chr1:224183418:+	GPR137B^ENSG00000077585.14	chr1:236178414:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2275:2173:15222	.	NO_LDAS	0.0034	GT	1.7968	AG	1.6895	"[""INTRACHROMOSOMAL[chr1:11.95Mb]""]"	chr1:224183418-chr1:236178414	False			0	Read count too low: 1 < 8	FAIL	1
DEGS1--ATF3	1	0	1.0	0.0	ONLY_REF_SPLICE	DEGS1^ENSG00000143753.13	chr1:224183418:+	ATF3^ENSG00000162772.17	chr1:212615018:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1109:20837:6185	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:11.55Mb]""]"	chr1:224183418-chr1:212615018	False			0	Read count too low: 1 < 8	FAIL	1
DEF8--METTL3	1	0	1.0	0.0	ONLY_REF_SPLICE	DEF8^ENSG00000140995.17	chr16:89955266:+	METTL3^ENSG00000165819.12	chr14:21501129:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1166:14340:1490	.	YES_LDAS	0.0034	GT	1.5058	AG	1.6402	"[""INTERCHROMOSOMAL[chr16--chr14]""]"	chr16:89955266-chr14:21501129	False			0	Read count too low: 1 < 8	FAIL	1
DDX59--MCAT	1	0	1.0	0.0	ONLY_REF_SPLICE	DDX59^ENSG00000118197.14	chr1:200648439:-	MCAT^ENSG00000100294.13	chr22:43141249:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1270:20125:5008	.	NO_LDAS	0.0034	GT	1.9899	AG	1.8256	"[""INTERCHROMOSOMAL[chr1--chr22]""]"	chr1:200648439-chr22:43141249	False			0	Read count too low: 1 < 8	FAIL	1
DDX59--ABHD15	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DDX59^ENSG00000118197.14	chr1:200669876:-	ABHD15^ENSG00000168792.5	chr17:29566839:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1210:46514:10164	.	YES_LDAS	0.0034	GT	1.4566	AG	1.5301	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:200669876-chr17:29566839	False			0	Read count too low: 1 < 8	FAIL	1
DDX55--AC068620.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DDX55^ENSG00000111364.16	chr12:123606159:+	AC068620.1^ENSG00000269921.1	chr4:56387694:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1290:36798:8525	.	NO_LDAS	0.0034	GT	1.6729	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:123606159-chr4:56387694	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DDX27--AC008481.1	1	0	0.2	0.0	INCL_NON_REF_SPLICE	DDX27^ENSG00000124228.15	chr20:49233342:+	AC008481.1^ENSG00000213303.3	chr19:11523731:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2181:8904:20799	.	YES_LDAS	0.0007	AT	1.5628	AC	1.9086	"[""INTERCHROMOSOMAL[chr20--chr19]""]"	chr20:49233342-chr19:11523731	False			0	Read count too low: 1 < 8	FAIL	1
DDTL--SPAG8	1	0	0.5	0.0	ONLY_REF_SPLICE	DDTL^ENSG00000099974.8	chr22:23967561:+	SPAG8^ENSG00000137098.14	chr9:35808306:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2204:46725:2065	.	YES_LDAS	0.0017	GT	1.7056	AG	1.9899	"[""INTERCHROMOSOMAL[chr22--chr9]""]"	chr22:23967561-chr9:35808306	False			0	Read count too low: 1 < 8	FAIL	1
DDTL--MRPL45P2	1	0	0.5	0.0	ONLY_REF_SPLICE	DDTL^ENSG00000099974.8	chr22:23967561:+	MRPL45P2^ENSG00000228782.7	chr17:47456793:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:13426:11369	.	YES_LDAS	0.0017	GT	1.7056	AG	1.9219	"[""INTERCHROMOSOMAL[chr22--chr17]""]"	chr22:23967561-chr17:47456793	False			0	Read count too low: 1 < 8	FAIL	1
DDT--SPAG8	1	0	0.5	0.0	ONLY_REF_SPLICE	DDT^ENSG00000099977.14	chr22:23973768:-	SPAG8^ENSG00000137098.14	chr9:35808306:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2204:46725:2065	.	YES_LDAS	0.0017	GT	1.7056	AG	1.9899	"[""INTERCHROMOSOMAL[chr22--chr9]""]"	chr22:23973768-chr9:35808306	False			0	Read count too low: 1 < 8	FAIL	1
DDT--MRPL45P2	1	0	0.5	0.0	ONLY_REF_SPLICE	DDT^ENSG00000099977.14	chr22:23973768:-	MRPL45P2^ENSG00000228782.7	chr17:47456793:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:13426:11369	.	YES_LDAS	0.0017	GT	1.7056	AG	1.9219	"[""INTERCHROMOSOMAL[chr22--chr17]""]"	chr22:23973768-chr17:47456793	False			0	Read count too low: 1 < 8	FAIL	1
DDR2--RGS5	1	0	1.0	0.0	ONLY_REF_SPLICE	DDR2^ENSG00000162733.19	chr1:162655374:+	RGS5^ENSG00000143248.13	chr1:163168368:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1292:21824:14592	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr1:0.32Mb]""]"	chr1:162655374-chr1:163168368	False			0	Read count too low: 1 < 8	FAIL	1
DDIT4L--KIF14	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DDIT4L^ENSG00000145358.6	chr4:100188121:-	KIF14^ENSG00000118193.12	chr1:200618179:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1412:23070:2766	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:100188121-chr1:200618179	False			0	Read count too low: 1 < 8	FAIL	1
DDAH1--BCL10	1	0	1.0	0.0	ONLY_REF_SPLICE	DDAH1^ENSG00000153904.21	chr1:85464743:-	BCL10^ENSG00000142867.14	chr1:85270906:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1478:48610:18277	.	YES_LDAS	0.0034	GT	1.3996	AG	1.8323	"[""INTRACHROMOSOMAL[chr1:0.04Mb]"",""NEIGHBORS[41853]""]"	chr1:85464743-chr1:85270906	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DCTD--TRPM6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DCTD^ENSG00000129187.15	chr4:182891403:-	TRPM6^ENSG00000119121.22	chr9:74782476:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2321:1396:10626	.	NO_LDAS	0.0034	GT	1.9219	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:182891403-chr9:74782476	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DCAKD--LINC02862	1	0	0.33	0.0	INCL_NON_REF_SPLICE	DCAKD^ENSG00000172992.12	chr17:45013487:-	LINC02862^ENSG00000237571.1	chr2:215277608:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271	.	NO_LDAS	0.0011	GT	1.9899	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:45013487-chr2:215277608	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DCAKD--ELP4	1	0	0.33	0.0	INCL_NON_REF_SPLICE	DCAKD^ENSG00000172992.12	chr17:45013487:-	ELP4^ENSG00000109911.19	chr11:31580683:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271	.	NO_LDAS	0.0011	GT	1.9899	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:45013487-chr11:31580683	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DCAKD--CCDC144NL	1	0	0.33	0.0	INCL_NON_REF_SPLICE	DCAKD^ENSG00000172992.12	chr17:45013487:-	CCDC144NL^ENSG00000205212.5	chr17:20837111:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1282:8087:22271	.	NO_LDAS	0.0011	GT	1.9899	AG	1.8062	"[""INTRACHROMOSOMAL[chr17:24.13Mb]""]"	chr17:45013487-chr17:20837111	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
DCAF11--PSTPIP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DCAF11^ENSG00000100897.18	chr14:24118458:+	PSTPIP2^ENSG00000152229.18	chr18:45992202:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1257:33198:8763	.	NO_LDAS	0.0034	GT	1.8062	AG	1.9219	"[""INTERCHROMOSOMAL[chr14--chr18]""]"	chr14:24118458-chr18:45992202	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DAPK1--FPR2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	DAPK1^ENSG00000196730.13	chr9:87647403:+	FPR2^ENSG00000171049.9	chr19:51769618:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987	.	NO_LDAS	0.0017	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr19]""]"	chr9:87647403-chr19:51769618	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DAPK1--FPR1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	DAPK1^ENSG00000196730.13	chr9:87647403:+	FPR1^ENSG00000171051.9	chr19:51746038:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1138:11889:8987	.	NO_LDAS	0.0017	GT	1.6895	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr19]""]"	chr9:87647403-chr19:51746038	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
DAPK1--AC139491.6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	DAPK1^ENSG00000196730.13	chr9:87640847:+	AC139491.6^ENSG00000283559.2	chr5:176155439:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2490:39541:29249	.	NO_LDAS	0.0034	GT	1.9656	AG	1.7232	"[""INTERCHROMOSOMAL[chr9--chr5]""]"	chr9:87640847-chr5:176155439	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CYTOR--MRPS9	1	0	0.5	0.0	ONLY_REF_SPLICE	CYTOR^ENSG00000222041.11	chr2:87455645:+	MRPS9^ENSG00000135972.9	chr2:105071313:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2283:9414:21094	.	YES_LDAS	0.0017	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr2:17.40Mb]""]"	chr2:87455645-chr2:105071313	False			0	Read count too low: 1 < 8	FAIL	1
CYP2C23P--CLCN2	1	0	0.33	0.0	INCL_NON_REF_SPLICE	CYP2C23P^ENSG00000283232.1	chr10:100122527:-	CLCN2^ENSG00000114859.16	chr3:184355460:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:44702:10921	.	NO_LDAS	0.0011	GT	1.6895	AG	1.7819	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:100122527-chr3:184355460	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CYP24A1--ATAD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CYP24A1^ENSG00000019186.10	chr20:54157169:-	ATAD1^ENSG00000138138.14	chr10:87753498:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2196:21217:19202	.	NO_LDAS	0.0034	GT	1.9656	AG	1.6895	"[""INTERCHROMOSOMAL[chr20--chr10]""]"	chr20:54157169-chr10:87753498	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CYP20A1--AC084838.1	1	0	1.0	0.0	ONLY_REF_SPLICE	CYP20A1^ENSG00000119004.16	chr2:203272748:+	AC084838.1^ENSG00000255076.2	chr8:14879300:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2427:46086:16343	.	NO_LDAS	0.0034	GT	1.6729	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr8]""]"	chr2:203272748-chr8:14879300	False			0	Read count too low: 1 < 8	FAIL	1
CYB5D1--MVD	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CYB5D1^ENSG00000182224.12	chr17:7858824:+	MVD^ENSG00000167508.12	chr16:88663115:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2309:18944:20589	.	YES_LDAS	0.0034	GT	1.8256	AG	1.6402	"[""INTERCHROMOSOMAL[chr17--chr16]""]"	chr17:7858824-chr16:88663115	False			0	Read count too low: 1 < 8	FAIL	1
CYB561D2--EIF1B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CYB561D2^ENSG00000114395.11	chr3:50351560:+	EIF1B^ENSG00000114784.4	chr3:40309871:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1182:14769:21206	.	YES_LDAS	0.0034	GT	1.7968	AG	1.9656	"[""INTRACHROMOSOMAL[chr3:10.05Mb]""]"	chr3:50351560-chr3:40309871	False			0	Read count too low: 1 < 8	FAIL	1
CYB561A3--LINC00279	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CYB561A3^ENSG00000162144.10	chr11:61356533:-	LINC00279^ENSG00000286217.2	chrY:8633049:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1326:43950:14214	.	NO_LDAS	0.0034	GT	1.7819	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chrY]""]"	chr11:61356533-chrY:8633049	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CXorf56--NDUFA1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CXorf56^ENSG00000018610.15	chrX:119539672:-	NDUFA1^ENSG00000125356.7	chrX:119876514:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1207:8661:24807	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8256	"[""INTRACHROMOSOMAL[chrX:0.31Mb]""]"	chrX:119539672-chrX:119876514	False			0	Read count too low: 1 < 8	FAIL	1
CUTC--ELF4	1	0	1.0	0.0	ONLY_REF_SPLICE	CUTC^ENSG00000119929.13	chr10:99736317:+	ELF4^ENSG00000102034.17	chrX:130081312:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1329:38918:12644	.	YES_LDAS	0.0034	GT	1.5628	AG	1.9219	"[""INTERCHROMOSOMAL[chr10--chrX]""]"	chr10:99736317-chrX:130081312	False			0	Read count too low: 1 < 8	FAIL	1
CUL2--FAM221B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CUL2^ENSG00000108094.16	chr10:35062960:-	FAM221B^ENSG00000204930.10	chr9:35818016:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:51085:21332	.	NO_LDAS	0.0034	GT	1.9899	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr9]""]"	chr10:35062960-chr9:35818016	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CU633906.5--RAB41	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CU633906.5^ENSG00000288187.1	chr21:6216499:-	RAB41^ENSG00000147127.8	chrX:70282261:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2290:45576:6353	.	NO_LDAS	0.0034	GT	1.2419	AG	1.6895	"[""INTERCHROMOSOMAL[chr21--chrX]""]"	chr21:6216499-chrX:70282261	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CTTNBP2--ELAPOR2	1	0	1.0	0.0	ONLY_REF_SPLICE	CTTNBP2^ENSG00000077063.11	chr7:117861209:-	ELAPOR2^ENSG00000164659.15	chr7:86926916:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1119:20473:16988	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTRACHROMOSOMAL[chr7:30.65Mb]""]"	chr7:117861209-chr7:86926916	False			0	Read count too low: 1 < 8	FAIL	1
CTSC--RAB38	1	0	1.0	0.0	ONLY_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88296133:-	RAB38^ENSG00000123892.12	chr11:88149955:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:23620:25774	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8062	"[""GTEx_recurrent_StarF2019"",""Babiceanu_Normal"",""ChimerSeq"",""Greger_Normal"",""INTRACHROMOSOMAL[chr11:0.09Mb]"",""NEIGHBORS[89626]""]"	chr11:88296133-chr11:88149955	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CTSC--DCTN6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CTSC^ENSG00000109861.17	chr11:88337556:-	DCTN6^ENSG00000104671.8	chr8:30164164:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2329:46927:12252	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTERCHROMOSOMAL[chr11--chr8]""]"	chr11:88337556-chr8:30164164	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CTDSPL2--PRPF38A	1	0	1.0	0.0	ONLY_REF_SPLICE	CTDSPL2^ENSG00000137770.14	chr15:44459200:+	PRPF38A^ENSG00000134748.13	chr1:52408569:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1181:13208:7460	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:44459200-chr1:52408569	False			0	Read count too low: 1 < 8	FAIL	1
CTAGE15--ARHGEF5	1	0	0.2	0.0	INCL_NON_REF_SPLICE	CTAGE15^ENSG00000271079.1	chr7:143571949:+	ARHGEF5^ENSG00000050327.15	chr7:144371299:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1291:31087:8076	.	NO_LDAS	0.0007	GT	1.9656	AG	1.9219	"[""INTRACHROMOSOMAL[chr7:0.78Mb]""]"	chr7:143571949-chr7:144371299	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CSTA--TPRG1	1	0	1.0	0.0	ONLY_REF_SPLICE	CSTA^ENSG00000121552.4	chr3:122325358:+	TPRG1^ENSG00000188001.10	chr3:189215292:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1283:34622:14872	.	YES_LDAS	0.0034	GT	1.585	AG	1.7968	"[""INTRACHROMOSOMAL[chr3:66.61Mb]""]"	chr3:122325358-chr3:189215292	False			0	Read count too low: 1 < 8	FAIL	1
CSNK1G1--EDC3	1	0	1.0	0.0	ONLY_REF_SPLICE	CSNK1G1^ENSG00000169118.18	chr15:64300319:-	EDC3^ENSG00000179151.13	chr15:74675142:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:30423:11747	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9086	"[""INTRACHROMOSOMAL[chr15:10.27Mb]""]"	chr15:64300319-chr15:74675142	False			0	Read count too low: 1 < 8	FAIL	1
CSGALNACT2--MGME1	1	0	1.0	0.0	ONLY_REF_SPLICE	CSGALNACT2^ENSG00000169826.8	chr10:43138567:+	MGME1^ENSG00000125871.14	chr20:17988166:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:38724:28870	.	YES_LDAS	0.0034	GT	1.3383	AG	1.8892	"[""INTERCHROMOSOMAL[chr10--chr20]""]"	chr10:43138567-chr20:17988166	False			0	Read count too low: 1 < 8	FAIL	1
CS--TLR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CS^ENSG00000062485.19	chr12:56286595:-	TLR2^ENSG00000137462.9	chr4:153706248:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:8305:17661	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:56286595-chr4:153706248	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CRYL1--RHBDL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CRYL1^ENSG00000165475.15	chr13:20432102:-	RHBDL1^ENSG00000103269.14	chr16:676053:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1463:3880:7782	.	NO_LDAS	0.0034	GT	1.7232	AG	1.5546	"[""INTERCHROMOSOMAL[chr13--chr16]""]"	chr13:20432102-chr16:676053	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CRYBG3--TMSB15B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CRYBG3^ENSG00000080200.10	chr3:97822355:+	TMSB15B^ENSG00000158427.15	chrX:103931139:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2391:33934:19987	.	NO_LDAS	0.0034	GT	1.6895	AG	1.8062	"[""INTERCHROMOSOMAL[chr3--chrX]""]"	chr3:97822355-chrX:103931139	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CRY1--KLHDC2	1	0	1.0	0.0	ONLY_REF_SPLICE	CRY1^ENSG00000008405.12	chr12:106992787:-	KLHDC2^ENSG00000165516.11	chr14:49771594:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1126:7731:29053	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8295	"[""INTERCHROMOSOMAL[chr12--chr14]""]"	chr12:106992787-chr14:49771594	False			0	Read count too low: 1 < 8	FAIL	1
CRNDE--USH1C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CRNDE^ENSG00000245694.10	chr16:54925212:-	USH1C^ENSG00000006611.17	chr11:17522926:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2383:6987:26642	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7465	"[""INTERCHROMOSOMAL[chr16--chr11]""]"	chr16:54925212-chr11:17522926	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CREM--CCDC7	1	0	1.0	0.0	ONLY_REF_SPLICE	CREM^ENSG00000095794.19	chr10:35179276:+	CCDC7^ENSG00000216937.13	chr10:32451592:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2210:32753:6787	.	YES_LDAS	0.0034	GT	1.8256	AG	1.585	"[""INTRACHROMOSOMAL[chr10:2.24Mb]""]"	chr10:35179276-chr10:32451592	False			0	Read count too low: 1 < 8	FAIL	1
CR2--ZNF717	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CR2^ENSG00000117322.18	chr1:207477954:+	ZNF717^ENSG00000227124.11	chr3:75736919:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1230:29355:19090	.	NO_LDAS	0.0034	GT	1.6729	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:207477954-chr3:75736919	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
COX6A1--BCLAF3	1	0	1.0	0.0	ONLY_REF_SPLICE	COX6A1^ENSG00000111775.3	chr12:120438521:+	BCLAF3^ENSG00000173681.16	chrX:19917334:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1459:24914:7670	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr12--chrX]""]"	chr12:120438521-chrX:19917334	False			0	Read count too low: 1 < 8	FAIL	1
COX18--SEC11C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	COX18^ENSG00000163626.17	chr4:73061895:-	SEC11C^ENSG00000166562.9	chr18:59152565:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1279:19914:9127	.	NO_LDAS	0.0034	GT	1.5546	AG	1.8892	"[""INTERCHROMOSOMAL[chr4--chr18]""]"	chr4:73061895-chr18:59152565	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
COX15--HERC4	1	0	1.0	0.0	ONLY_REF_SPLICE	COX15^ENSG00000014919.13	chr10:99727441:-	HERC4^ENSG00000148634.16	chr10:67955130:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:2925:8623	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9329	"[""INTRACHROMOSOMAL[chr10:31.64Mb]""]"	chr10:99727441-chr10:67955130	False			0	Read count too low: 1 < 8	FAIL	1
COX11--COQ2	1	0	1.0	0.0	ONLY_REF_SPLICE	COX11^ENSG00000166260.13	chr17:54963306:-	COQ2^ENSG00000173085.15	chr4:83279114:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1301:34145:7460	.	YES_LDAS	0.0034	GT	1.6402	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr4]""]"	chr17:54963306-chr4:83279114	False			0	Read count too low: 1 < 8	FAIL	1
CORO2B--TEAD3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CORO2B^ENSG00000103647.13	chr15:68645364:+	TEAD3^ENSG00000007866.22	chr6:35475981:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2394:28441:4923	.	NO_LDAS	0.0034	GT	1.8892	AG	1.3996	"[""INTERCHROMOSOMAL[chr15--chr6]""]"	chr15:68645364-chr6:35475981	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
COQ2--AC004847.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	COQ2^ENSG00000173085.15	chr4:83273496:-	AC004847.1^ENSG00000260997.1	chr7:44959448:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1148:27632:13191	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr4--chr7]""]"	chr4:83273496-chr7:44959448	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
COPS2--AC018638.8	1	0	0.13	0.0	INCL_NON_REF_SPLICE	COPS2^ENSG00000166200.15	chr15:49119045:-	AC018638.8^ENSG00000281896.1	chr7:128617868:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1121:48488:28100	.	YES_LDAS	0.0004	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:49119045-chr7:128617868	False			0	Read count too low: 1 < 8	FAIL	1
COMMD2--ATP1B3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	COMMD2^ENSG00000114744.9	chr3:149752406:-	ATP1B3^ENSG00000069849.11	chr3:141876881:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1409:51878:9365	.	YES_LDAS	0.0034	GC	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr3:7.81Mb]""]"	chr3:149752406-chr3:141876881	False			0	Read count too low: 1 < 8	FAIL	1
COL4A3--COA5	1	0	1.0	0.0	ONLY_REF_SPLICE	COL4A3^ENSG00000169031.20	chr2:227310948:+	COA5^ENSG00000183513.9	chr2:98602645:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2292:45964:19020	.	NO_LDAS	0.0034	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chr2:128.56Mb]""]"	chr2:227310948-chr2:98602645	False			0	Read count too low: 1 < 8	FAIL	1
COG3--FAHD2A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	COG3^ENSG00000136152.15	chr13:45465137:+	FAHD2A^ENSG00000115042.10	chr2:95412476:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1237:40722:6521	.	YES_LDAS	0.0034	GC	1.5219	AG	1.8892	"[""INTERCHROMOSOMAL[chr13--chr2]""]"	chr13:45465137-chr2:95412476	False			0	Read count too low: 1 < 8	FAIL	1
COA5--KIF5C	1	0	0.25	0.0	INCL_NON_REF_SPLICE	COA5^ENSG00000183513.9	chr2:98604111:-	KIF5C^ENSG00000168280.18	chr2:148978973:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1458:21039:16736	.	NO_LDAS	0.0008	GT	1.7465	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:50.27Mb]""]"	chr2:98604111-chr2:148978973	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CNTNAP3C--BX005040.4	1	0	1.0	0.0	ONLY_REF_SPLICE	CNTNAP3C^ENSG00000283378.1	chr9:61453030:+	BX005040.4^ENSG00000283541.1	chr9:61097039:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1476:34946:25942	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61453030-chr9:61097039	False			0	Read count too low: 1 < 8	FAIL	1
CNTNAP3C--BX005040.4	1	0	1.0	0.0	ONLY_REF_SPLICE	CNTNAP3C^ENSG00000283378.1	chr9:61331052:+	BX005040.4^ENSG00000283541.1	chr9:61082046:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:32074:17577	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61331052-chr9:61082046	False			0	Read count too low: 1 < 8	FAIL	1
CNTLN--IVNS1ABP	1	0	1.0	0.0	ONLY_REF_SPLICE	CNTLN^ENSG00000044459.15	chr9:17226287:+	IVNS1ABP^ENSG00000116679.16	chr1:185305643:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2473:16258:14984	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9329	"[""INTERCHROMOSOMAL[chr9--chr1]""]"	chr9:17226287-chr1:185305643	False			0	Read count too low: 1 < 8	FAIL	1
CNOT10--TTC13	1	0	1.0	0.0	ONLY_REF_SPLICE	CNOT10^ENSG00000182973.19	chr3:32762863:+	TTC13^ENSG00000143643.13	chr1:230961303:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:23992:11313	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""HGNC_GENEFAM"",""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:32762863-chr1:230961303	False			0	Excluded annotation pattern: HGNC_GENEFAM	FAIL	1
CNGB1--GAR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CNGB1^ENSG00000070729.14	chr16:57949361:-	GAR1^ENSG00000109534.17	chr4:109822405:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1438:2909:17002	.	NO_LDAS	0.0034	GT	0.971	AG	1.9086	"[""INTERCHROMOSOMAL[chr16--chr4]""]"	chr16:57949361-chr4:109822405	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CLYBL--PCCA	1	0	1.0	0.0	ONLY_REF_SPLICE	CLYBL^ENSG00000125246.15	chr13:99859049:+	PCCA^ENSG00000175198.17	chr13:100425633:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2145:36289:13667	.	YES_LDAS	0.0034	GT	1.8323	AG	1.4566	"[""INTRACHROMOSOMAL[chr13:0.19Mb]""]"	chr13:99859049-chr13:100425633	False			0	Read count too low: 1 < 8	FAIL	1
CLPX--ACSM2B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CLPX^ENSG00000166855.9	chr15:65164029:-	ACSM2B^ENSG00000066813.14	chr16:20536835:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1164:26961:26713	.	NO_LDAS	0.0034	GT	1.7968	AG	0.9183	"[""INTERCHROMOSOMAL[chr15--chr16]""]"	chr15:65164029-chr16:20536835	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CLDN15--FIS1	1	0	1.0	0.0	ONLY_REF_SPLICE	CLDN15^ENSG00000106404.14	chr7:101237365:-	FIS1^ENSG00000214253.9	chr7:101244139:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1237:30965:28492	.	YES_LDAS	0.0034	GT	1.5656	AG	1.371	"[""INTRACHROMOSOMAL[chr7:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[638]""]"	chr7:101237365-chr7:101244139	False			0	Read count too low: 1 < 8	FAIL	1
CLCF1--POLD4	1	0	1.0	0.0	ONLY_REF_SPLICE	CLCF1^ENSG00000175505.11	chr11:67373524:-	POLD4^ENSG00000175482.9	chr11:67353077:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2297:6081:20925	.	YES_LDAS	0.0034	GT	1.9086	AG	1.5058	"[""ConjoinG"",""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[7196]""]"	chr11:67373524-chr11:67353077	False			0	Excluded annotation pattern: ConjoinG	FAIL	1
CKLF--CMTM1	1	0	1.0	0.0	ONLY_REF_SPLICE	CKLF^ENSG00000217555.13	chr16:66552793:+	CMTM1^ENSG00000089505.18	chr16:66577104:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1258:18547:14858	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9329	"[""ConjoinG"",""INTRACHROMOSOMAL[chr16:0.00Mb]"",""NEIGHBORS[142]""]"	chr16:66552793-chr16:66577104	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CISD2--ZMYND11	1	0	1.0	0.0	ONLY_REF_SPLICE	CISD2^ENSG00000145354.12	chr4:102869187:+	ZMYND11^ENSG00000015171.20	chr10:179994:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1193:20861:21752	.	YES_LDAS	0.0034	GT	1.9656	AG	1.6049	"[""INTERCHROMOSOMAL[chr4--chr10]""]"	chr4:102869187-chr10:179994	False			0	Read count too low: 1 < 8	FAIL	1
CIBAR1--TUBE1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CIBAR1^ENSG00000188343.13	chr8:93705010:+	TUBE1^ENSG00000074935.14	chr6:112086904:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1250:46919:26474	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTERCHROMOSOMAL[chr8--chr6]""]"	chr8:93705010-chr6:112086904	False			0	Read count too low: 1 < 8	FAIL	1
CIB1--ATP5MF	1	0	1.0	0.0	ONLY_REF_SPLICE	CIB1^ENSG00000185043.12	chr15:90233669:-	ATP5MF^ENSG00000241468.8	chr7:99460193:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1173:11412:7039	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr15--chr7]""]"	chr15:90233669-chr7:99460193	False			0	Read count too low: 1 < 8	FAIL	1
CHST11--SLC41A2	1	0	1.0	0.0	ONLY_REF_SPLICE	CHST11^ENSG00000171310.11	chr12:104601991:+	SLC41A2^ENSG00000136052.9	chr12:104805337:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1331:21112:3466	.	YES_LDAS	0.0034	GT	1.7056	AG	1.8295	"[""Klijn_CellLines"",""INTRACHROMOSOMAL[chr12:0.04Mb]"",""LOCAL_INVERSION:+:-:[40539]""]"	chr12:104601991-chr12:104805337	False			0	Read count too low: 1 < 8	FAIL	1
CHN1--ZNF830	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CHN1^ENSG00000128656.15	chr2:175005263:-	ZNF830^ENSG00000198783.6	chr17:34962113:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2218:17431:25451	.	NO_LDAS	0.0034	GT	1.1589	AG	1.7232	"[""INTERCHROMOSOMAL[chr2--chr17]""]"	chr2:175005263-chr17:34962113	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CHMP7--AC100861.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CHMP7^ENSG00000147457.14	chr8:23260648:+	AC100861.1^ENSG00000246582.3	chr8:23225805:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2487:46644:6521	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[12711]""]"	chr8:23260648-chr8:23225805	False			0	Read count too low: 1 < 8	FAIL	1
CHMP4C--TERF1	1	0	1.0	0.0	ONLY_REF_SPLICE	CHMP4C^ENSG00000164695.5	chr8:81732816:+	TERF1^ENSG00000147601.15	chr8:73045961:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2242:16452:23952	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:8.68Mb]""]"	chr8:81732816-chr8:73045961	False			0	Read count too low: 1 < 8	FAIL	1
CHMP4A--ZNF721	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CHMP4A^ENSG00000254505.11	chr14:24210756:-	ZNF721^ENSG00000182903.16	chr4:444432:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2183:31071:4797	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7232	"[""INTERCHROMOSOMAL[chr14--chr4]""]"	chr14:24210756-chr4:444432	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CHMP4A--IRF9	1	0	1.0	0.0	ONLY_REF_SPLICE	CHMP4A^ENSG00000254505.11	chr14:24210348:-	IRF9^ENSG00000213928.9	chr14:24164063:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1286:52113:14536	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTRACHROMOSOMAL[chr14:0.04Mb]"",""LOCAL_INVERSION:-:+:[43050]""]"	chr14:24210348-chr14:24164063	False			0	Read count too low: 1 < 8	FAIL	1
CHML--TSNAX	1	0	1.0	0.0	ONLY_REF_SPLICE	CHML^ENSG00000203668.3	chr1:241639882:-	TSNAX^ENSG00000116918.15	chr1:231542481:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1177:3848:18768	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:10.06Mb]""]"	chr1:241639882-chr1:231542481	False			0	Read count too low: 1 < 8	FAIL	1
CHM--AC117394.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CHM^ENSG00000188419.14	chrX:86027491:-	AC117394.1^ENSG00000241671.1	chr3:153129193:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:42752:14494	.	YES_LDAS	0.0017	GT	1.8295	AG	1.8295	"[""INTERCHROMOSOMAL[chrX--chr3]""]"	chrX:86027491-chr3:153129193	False			0	Read count too low: 1 < 8	FAIL	1
CHKA--ZNF343	1	0	1.0	0.0	ONLY_REF_SPLICE	CHKA^ENSG00000110721.12	chr11:68097019:-	ZNF343^ENSG00000088876.13	chr20:2493577:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:47404:11313	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr20]""]"	chr11:68097019-chr20:2493577	False			0	Read count too low: 1 < 8	FAIL	1
CHCHD6--TXNRD3	1	0	1.0	0.0	ONLY_REF_SPLICE	CHCHD6^ENSG00000159685.11	chr3:126733222:+	TXNRD3^ENSG00000197763.20	chr3:126647296:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:6412:22901	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:0.05Mb]"",""LOCAL_INVERSION:+:-:[49116]""]"	chr3:126733222-chr3:126647296	False			0	Read count too low: 1 < 8	FAIL	1
CFAP70--ACKR2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CFAP70^ENSG00000156042.18	chr10:73291226:-	ACKR2^ENSG00000144648.16	chr3:42866359:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2287:45082:19342	.	YES_LDAS	0.0034	GT	1.8256	AG	1.7819	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:73291226-chr3:42866359	False			0	Read count too low: 1 < 8	FAIL	1
CFAP44--SPICE1	1	0	1.0	0.0	ONLY_REF_SPLICE	CFAP44^ENSG00000206530.11	chr3:113380899:-	SPICE1^ENSG00000163611.11	chr3:113468404:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:29420:11411	.	YES_LDAS	0.0034	GT	1.8323	AG	1.6402	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1108]""]"	chr3:113380899-chr3:113468404	False			0	Read count too low: 1 < 8	FAIL	1
CFAP36--ACSM3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CFAP36^ENSG00000163001.12	chr2:55519910:+	ACSM3^ENSG00000005187.12	chr16:20749650:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2312:13337:26993	.	NO_LDAS	0.0034	GT	1.8062	AG	1.4295	"[""INTERCHROMOSOMAL[chr2--chr16]""]"	chr2:55519910-chr16:20749650	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CETN3--DEPDC1B	1	0	1.0	0.0	ONLY_REF_SPLICE	CETN3^ENSG00000153140.9	chr5:90399358:-	DEPDC1B^ENSG00000035499.13	chr5:60647533:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2313:19300:12910	.	YES_LDAS	0.0034	GT	1.5219	AG	1.2729	"[""INTRACHROMOSOMAL[chr5:29.69Mb]""]"	chr5:90399358-chr5:60647533	False			0	Read count too low: 1 < 8	FAIL	1
CERS5--TRMT12	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CERS5^ENSG00000139624.14	chr12:50133212:-	TRMT12^ENSG00000183665.5	chr8:124450925:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2256:5903:18571	.	YES_LDAS	0.0034	GT	1.9219	AG	1.5219	"[""INTERCHROMOSOMAL[chr12--chr8]""]"	chr12:50133212-chr8:124450925	False			0	Read count too low: 1 < 8	FAIL	1
CEP85L--GET1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CEP85L^ENSG00000111860.14	chr6:118464213:-	GET1^ENSG00000182093.16	chr21:39390830:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1270:18369:9618	.	NO_LDAS	0.0017	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chr6--chr21]""]"	chr6:118464213-chr21:39390830	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CEP68--CMTR1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CEP68^ENSG00000011523.14	chr2:65072521:+	CMTR1^ENSG00000137200.13	chr6:37435713:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2248:32939:3438	.	YES_LDAS	0.0034	GT	1.4716	AG	1.9219	"[""INTERCHROMOSOMAL[chr2--chr6]""]"	chr2:65072521-chr6:37435713	False			0	Read count too low: 1 < 8	FAIL	1
CEP44--AC025458.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CEP44^ENSG00000164118.13	chr4:174317915:+	AC025458.1^ENSG00000249774.1	chr5:31923466:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2317:38942:16133	.	YES_LDAS	0.0034	AT	1.585	AC	1.8062	"[""INTERCHROMOSOMAL[chr4--chr5]""]"	chr4:174317915-chr5:31923466	False			0	Read count too low: 1 < 8	FAIL	1
CEP290--HEATR5A	1	0	1.0	0.0	ONLY_REF_SPLICE	CEP290^ENSG00000198707.17	chr12:88120114:-	HEATR5A^ENSG00000129493.15	chr14:31296063:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:46425:18922	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr12--chr14]""]"	chr12:88120114-chr14:31296063	False			0	Read count too low: 1 < 8	FAIL	1
CEP135--FZD3	1	0	1.0	0.0	ONLY_REF_SPLICE	CEP135^ENSG00000174799.11	chr4:55992085:+	FZD3^ENSG00000104290.11	chr8:28555738:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1277:49880:14956	.	NO_LDAS	0.0034	GT	1.9899	AG	1.5219	"[""INTERCHROMOSOMAL[chr4--chr8]""]"	chr4:55992085-chr8:28555738	False			0	Read count too low: 1 < 8	FAIL	1
CEP112--TMPO	1	0	1.0	0.0	ONLY_REF_SPLICE	CEP112^ENSG00000154240.17	chr17:66175044:-	TMPO^ENSG00000120802.14	chr12:98537475:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:32098:28408	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr12]""]"	chr17:66175044-chr12:98537475	False			0	Read count too low: 1 < 8	FAIL	1
CENPV--PJVK	1	0	1.0	0.0	ONLY_REF_SPLICE	CENPV^ENSG00000166582.10	chr17:16349931:-	PJVK^ENSG00000204311.15	chr2:178460982:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1261:40002:28170	.	YES_LDAS	0.0034	GT	1.8323	AG	1.5219	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:16349931-chr2:178460982	False			0	Read count too low: 1 < 8	FAIL	1
CENPN--GCSH	1	0	1.0	0.0	ONLY_REF_SPLICE	CENPN^ENSG00000166451.14	chr16:81007277:+	GCSH^ENSG00000140905.11	chr16:81087664:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1220:41579:13219	.	YES_LDAS	0.0034	GT	1.7232	AG	1.7465	"[""INTRACHROMOSOMAL[chr16:0.05Mb]"",""LOCAL_INVERSION:+:-:[48831]""]"	chr16:81007277-chr16:81087664	False			0	Read count too low: 1 < 8	FAIL	1
CENPI--MYL6B	1	0	1.0	0.0	ONLY_REF_SPLICE	CENPI^ENSG00000102384.13	chrX:101098539:+	MYL6B^ENSG00000196465.10	chr12:56157468:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1430:2424:25241	.	YES_LDAS	0.0034	GT	1.371	AG	1.7056	"[""INTERCHROMOSOMAL[chrX--chr12]""]"	chrX:101098539-chr12:56157468	False			0	Read count too low: 1 < 8	FAIL	1
CENATAC--AC142086.6	1	0	0.25	0.0	INCL_NON_REF_SPLICE	CENATAC^ENSG00000186166.9	chr11:119011283:+	AC142086.6^ENSG00000277304.1	chr16:32946317:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2284:14680:29571	.	NO_LDAS	0.0008	GT	1.9086	AG	1.7968	"[""INTERCHROMOSOMAL[chr11--chr16]""]"	chr11:119011283-chr16:32946317	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDK8P1--CDK8	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CDK8P1^ENSG00000230044.1	chr2:11665846:-	CDK8^ENSG00000132964.12	chr13:26396300:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2112:47445:23882	.	NO_LDAS	0.0034	GT	1.3996	AG	1.5546	"[""INTERCHROMOSOMAL[chr2--chr13]""]"	chr2:11665846-chr13:26396300	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDK8--IFT88	1	0	1.0	0.0	ONLY_REF_SPLICE	CDK8^ENSG00000132964.12	chr13:26353880:+	IFT88^ENSG00000032742.18	chr13:20690705:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2356:45268:1476	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr13:5.56Mb]""]"	chr13:26353880-chr13:20690705	False			0	Read count too low: 1 < 8	FAIL	1
CDK7--AC008015.1	1	0	0.25	0.0	INCL_NON_REF_SPLICE	CDK7^ENSG00000134058.12	chr5:69235453:+	AC008015.1^ENSG00000258578.2	chr14:76013704:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2189:20416:18179	.	NO_LDAS	0.0008	GT	1.9219	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr14]""]"	chr5:69235453-chr14:76013704	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDK6--POT1	1	0	1.0	0.0	ONLY_REF_SPLICE	CDK6^ENSG00000105810.10	chr7:92725626:-	POT1^ENSG00000128513.16	chr7:124842963:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1190:16581:15713	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTRACHROMOSOMAL[chr7:31.99Mb]""]"	chr7:92725626-chr7:124842963	False			0	Read count too low: 1 < 8	FAIL	1
CDIN1--AL669831.4	1	0	0.5	0.0	ONLY_REF_SPLICE	CDIN1^ENSG00000186073.14	chr15:36709961:+	AL669831.4^ENSG00000230092.7	chr1:810170:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2486:23984:23378	.	YES_LDAS	0.0017	GT	1.9086	AG	1.7056	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:36709961-chr1:810170	False			0	Read count too low: 1 < 8	FAIL	1
CDCA5--DNAJC17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CDCA5^ENSG00000146670.10	chr11:65079382:-	DNAJC17^ENSG00000104129.10	chr15:40807455:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:33085:14900	.	YES_LDAS	0.0034	GT	1.4566	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:65079382-chr15:40807455	False			0	Read count too low: 1 < 8	FAIL	1
CDC42SE1--TRIM40	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CDC42SE1^ENSG00000197622.13	chr1:151055677:-	TRIM40^ENSG00000204614.9	chr6:30146063:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:24736:18796	.	NO_LDAS	0.0017	GT	1.5656	AG	1.6895	"[""INTERCHROMOSOMAL[chr1--chr6]""]"	chr1:151055677-chr6:30146063	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDC42SE1--MYH13	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CDC42SE1^ENSG00000197622.13	chr1:151055677:-	MYH13^ENSG00000006788.14	chr17:10320478:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1345:24736:18796	.	NO_LDAS	0.0017	GT	1.5656	AG	1.6895	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:151055677-chr17:10320478	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CDC25A--DSN1	1	0	1.0	0.0	ONLY_REF_SPLICE	CDC25A^ENSG00000164045.12	chr3:48184653:-	DSN1^ENSG00000149636.16	chr20:36771473:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1408:2383:21948	.	YES_LDAS	0.0034	GT	1.4716	AG	1.9899	"[""INTERCHROMOSOMAL[chr3--chr20]""]"	chr3:48184653-chr20:36771473	False			0	Read count too low: 1 < 8	FAIL	1
CD99P1--MCPH1	1	0	1.0	0.0	ONLY_REF_SPLICE	CD99P1^ENSG00000223773.7	chrX:2626642:+	MCPH1^ENSG00000147316.13	chr8:6455143:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1251:17131:2205	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7465	"[""INTERCHROMOSOMAL[chrY--chr8]""]"	chrX:2626642-chr8:6455143	False			0	Read count too low: 1 < 8	FAIL	1
CD99L2--FAM122C	1	0	1.0	0.0	ONLY_REF_SPLICE	CD99L2^ENSG00000102181.21	chrX:150898522:-	FAM122C^ENSG00000156500.15	chrX:134829226:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2360:50697:1518	.	YES_LDAS	0.0034	GT	1.8323	AG	1.7056	"[""INTRACHROMOSOMAL[chrX:15.91Mb]""]"	chrX:150898522-chrX:134829226	False			0	Read count too low: 1 < 8	FAIL	1
CD83--AL009177.1	1	0	1.0	0.0	ONLY_REF_SPLICE	CD83^ENSG00000112149.10	chr6:14118065:+	AL009177.1^ENSG00000286277.1	chr6:14498057:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2371:48707:18950	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8295	"[""INTRACHROMOSOMAL[chr6:0.29Mb]""]"	chr6:14118065-chr6:14498057	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CCT6P1--AC073210.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CCT6P1^ENSG00000228409.6	chr7:65763344:+	AC073210.1^ENSG00000227113.2	chr7:65078624:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:34703:17703	.	YES_LDAS	0.0034	GT	1.9086	AG	1.8323	"[""INTRACHROMOSOMAL[chr7:0.67Mb]""]"	chr7:65763344-chr7:65078624	False			0	Read count too low: 1 < 8	FAIL	1
CCSER1--TEX35	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CCSER1^ENSG00000184305.15	chr4:90309377:+	TEX35^ENSG00000240021.10	chr1:178521683:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:12884:20491	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:90309377-chr1:178521683	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCP110--ERI2	1	0	1.0	0.0	ONLY_REF_SPLICE	CCP110^ENSG00000103540.16	chr16:19532544:+	ERI2^ENSG00000196678.14	chr16:20789557:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2489:47024:12392	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9899	"[""INTRACHROMOSOMAL[chr16:1.23Mb]""]"	chr16:19532544-chr16:20789557	False			0	Read count too low: 1 < 8	FAIL	1
CCNYL4--ZNF37A	1	0	1.0	0.0	ONLY_REF_SPLICE	CCNYL4^ENSG00000224761.4	chr10:38177975:+	ZNF37A^ENSG00000075407.18	chr10:38114755:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1439:31022:26741	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8323	"[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[14355]""]"	chr10:38177975-chr10:38114755	False			0	Read count too low: 1 < 8	FAIL	1
CCNJL--TTC1	1	0	1.0	0.0	ONLY_REF_SPLICE	CCNJL^ENSG00000135083.16	chr5:160311858:-	TTC1^ENSG00000113312.11	chr5:160035140:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1244:17779:1252	.	YES_LDAS	0.0034	GT	1.8256	AG	0.9183	"[""INTRACHROMOSOMAL[chr5:0.18Mb]""]"	chr5:160311858-chr5:160035140	False			0	Read count too low: 1 < 8	FAIL	1
CCNDBP1--ZNF780A	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCNDBP1^ENSG00000166946.14	chr15:43188626:+	ZNF780A^ENSG00000197782.14	chr19:40083237:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2358:35480:2794	.	YES_LDAS	0.0017	GT	1.9329	AG	1.9899	"[""INTERCHROMOSOMAL[chr15--chr19]""]"	chr15:43188626-chr19:40083237	False			0	Read count too low: 1 < 8	FAIL	1
CCDC62--AL035458.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CCDC62^ENSG00000130783.14	chr12:122792121:+	AL035458.1^ENSG00000236456.1	chr20:34246332:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1491:15780:27834	.	YES_LDAS	0.0017	GT	1.7232	AG	1.3996	"[""INTERCHROMOSOMAL[chr12--chr20]""]"	chr12:122792121-chr20:34246332	False			0	Read count too low: 1 < 8	FAIL	1
CCDC24--MFSD13A	1	0	0.33	0.0	INCL_NON_REF_SPLICE	CCDC24^ENSG00000159214.13	chr1:43993906:+	MFSD13A^ENSG00000138111.14	chr10:102475782:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1462:1332:8384	.	NO_LDAS	0.0011	GC	1.9656	AG	1.6729	"[""INTERCHROMOSOMAL[chr1--chr10]""]"	chr1:43993906-chr10:102475782	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCDC198--NPIPB10P	1	0	0.06	0.0	ONLY_REF_SPLICE	CCDC198^ENSG00000100557.10	chr14:57475582:-	NPIPB10P^ENSG00000196796.5	chr16:29050502:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1169:45924:10010	.	YES_LDAS	0.0002	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr14--chr16]""]"	chr14:57475582-chr16:29050502	False			0	Read count too low: 1 < 8	FAIL	1
CCDC18--CENPI	1	0	1.0	0.0	ONLY_REF_SPLICE	CCDC18^ENSG00000122483.17	chr1:93264901:+	CENPI^ENSG00000102384.13	chrX:101140666:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1106:12334:26993	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8323	"[""INTERCHROMOSOMAL[chr1--chrX]""]"	chr1:93264901-chrX:101140666	False			0	Read count too low: 1 < 8	FAIL	1
CCDC151--FAT3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CCDC151^ENSG00000198003.12	chr19:11426873:-	FAT3^ENSG00000165323.16	chr11:92799297:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2366:47162:10781	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr19--chr11]""]"	chr19:11426873-chr11:92799297	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CCDC15--SLC37A2	1	0	1.0	0.0	ONLY_REF_SPLICE	CCDC15^ENSG00000149548.15	chr11:125039069:+	SLC37A2^ENSG00000134955.12	chr11:125076757:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1222:43367:21416	.	NO_LDAS	0.0034	GT	1.5546	AG	1.9329	"[""INTRACHROMOSOMAL[chr11:0.02Mb]"",""NEIGHBORS[21813]""]"	chr11:125039069-chr11:125076757	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CCDC136--COBLL1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CCDC136^ENSG00000128596.17	chr7:128812929:+	COBLL1^ENSG00000082438.18	chr2:164779755:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2320:44063:6058	.	NO_LDAS	0.0034	GT	1.6402	AG	1.6402	"[""INTERCHROMOSOMAL[chr7--chr2]""]"	chr7:128812929-chr2:164779755	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CBLN4--AC012676.1	1	0	0.2	0.0	INCL_NON_REF_SPLICE	CBLN4^ENSG00000054803.4	chr20:56004100:-	AC012676.1^ENSG00000262712.1	chr16:4337173:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2412:32907:28941	.	NO_LDAS	0.0007	GT	1.4295	AG	1.4566	"[""INTERCHROMOSOMAL[chr20--chr16]""]"	chr20:56004100-chr16:4337173	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CATSPER3--C5orf66	1	0	1.0	0.0	ONLY_REF_SPLICE	CATSPER3^ENSG00000152705.8	chr5:135009490:+	C5orf66^ENSG00000224186.8	chr5:135174042:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1309:26815:12056	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTRACHROMOSOMAL[chr5:0.02Mb]"",""NEIGHBORS[21584]""]"	chr5:135009490-chr5:135174042	False			0	Read count too low: 1 < 8	FAIL	1
CASP8--STRADB	1	0	1.0	0.0	ONLY_REF_SPLICE	CASP8^ENSG00000064012.22	chr2:201285317:+	STRADB^ENSG00000082146.13	chr2:201454746:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2425:1558:8469	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr2:0.10Mb]""]"	chr2:201285317-chr2:201454746	False			0	Read count too low: 1 < 8	FAIL	1
CASP6--PPP1R11	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CASP6^ENSG00000138794.10	chr4:109694555:-	PPP1R11^ENSG00000204619.8	chr6:30067193:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1101:12601:20001	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9219	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:109694555-chr6:30067193	False			0	Read count too low: 1 < 8	FAIL	1
CASP4--TSPAN3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CASP4^ENSG00000196954.14	chr11:104951009:-	TSPAN3^ENSG00000140391.15	chr15:77052444:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1321:38287:13401	.	YES_LDAS	0.0034	GC	1.9329	AG	1.7232	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:104951009-chr15:77052444	False			0	Read count too low: 1 < 8	FAIL	1
CASC9--AC100782.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CASC9^ENSG00000249395.4	chr8:75324221:-	AC100782.1^ENSG00000254238.1	chr8:75029459:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:16970:3634	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8062	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[90949]""]"	chr8:75324221-chr8:75029459	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
CAPZA2--ARMC1	1	0	1.0	0.0	ONLY_REF_SPLICE	CAPZA2^ENSG00000198898.14	chr7:116862650:+	ARMC1^ENSG00000104442.10	chr8:65627433:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2212:23393:8202	.	YES_LDAS	0.0034	GT	1.7819	AG	1.2729	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:116862650-chr8:65627433	False			0	Read count too low: 1 < 8	FAIL	1
CAP2--GRIN2A	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CAP2^ENSG00000112186.12	chr6:17426694:+	GRIN2A^ENSG00000183454.18	chr16:9755337:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2222:29622:10584	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr16]""]"	chr6:17426694-chr16:9755337	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CAP2--AC132008.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CAP2^ENSG00000112186.12	chr6:17426694:+	AC132008.2^ENSG00000214135.8	chr3:197593126:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2222:29622:10584	.	NO_LDAS	0.0017	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:17426694-chr3:197593126	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CAMLG--GCSH	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CAMLG^ENSG00000164615.6	chr5:134744025:+	GCSH^ENSG00000140905.11	chr16:81082762:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1454:33570:11481	.	YES_LDAS	0.0034	AT	1.9329	AC	1.5329	"[""INTERCHROMOSOMAL[chr5--chr16]""]"	chr5:134744025-chr16:81082762	False			0	Read count too low: 1 < 8	FAIL	1
CAMKMT--SLC8A3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	CAMKMT^ENSG00000143919.15	chr2:44362145:+	SLC8A3^ENSG00000100678.19	chr14:70167459:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1186:27940:1224	.	NO_LDAS	0.0034	GT	1.9086	AG	1.7232	"[""INTERCHROMOSOMAL[chr2--chr14]""]"	chr2:44362145-chr14:70167459	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
CACNB2--NEBL	1	0	1.0	0.0	ONLY_REF_SPLICE	CACNB2^ENSG00000165995.22	chr10:18150975:+	NEBL^ENSG00000078114.19	chr10:20961779:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2290:2569:18796	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7232	"[""INTRACHROMOSOMAL[chr10:2.24Mb]""]"	chr10:18150975-chr10:20961779	False			0	Read count too low: 1 < 8	FAIL	1
CABYR--TTC39C	1	0	1.0	0.0	ONLY_REF_SPLICE	CABYR^ENSG00000154040.21	chr18:24156042:+	TTC39C^ENSG00000168234.13	chr18:24080585:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2260:3710:2892	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9086	"[""INTRACHROMOSOMAL[chr18:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3377]""]"	chr18:24156042-chr18:24080585	False			0	Read count too low: 1 < 8	FAIL	1
CA13--AC011005.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	CA13^ENSG00000185015.8	chr8:85281639:+	AC011005.1^ENSG00000230626.4	chr7:129126818:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2283:44540:8398	.	YES_LDAS	0.0017	GT	1.7968	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:85281639-chr7:129126818	False			0	Read count too low: 1 < 8	FAIL	1
C8orf88--PIP4P2	1	0	1.0	0.0	ONLY_REF_SPLICE	C8orf88^ENSG00000253250.3	chr8:90960742:-	PIP4P2^ENSG00000155099.8	chr8:91021404:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1201:11129:29305	.	YES_LDAS	0.0034	GT	1.7968	AG	1.7232	"[""INTRACHROMOSOMAL[chr8:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[8564]""]"	chr8:90960742-chr8:91021404	False			0	Read count too low: 1 < 8	FAIL	1
C7orf25--VPS41	1	0	1.0	0.0	ONLY_REF_SPLICE	C7orf25^ENSG00000136197.13	chr7:42911915:-	VPS41^ENSG00000006715.16	chr7:38898129:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1207:5555:4965	.	YES_LDAS	0.0034	GT	1.5656	AG	1.9899	"[""INTRACHROMOSOMAL[chr7:3.98Mb]""]"	chr7:42911915-chr7:38898129	False			0	Read count too low: 1 < 8	FAIL	1
C7orf25--DMGDH	1	0	1.0	0.0	INCL_NON_REF_SPLICE	C7orf25^ENSG00000136197.13	chr7:42910813:-	DMGDH^ENSG00000132837.15	chr5:79028624:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2492:22220:20239	.	NO_LDAS	0.0034	GT	1.7232	AG	1.5219	"[""INTERCHROMOSOMAL[chr7--chr5]""]"	chr7:42910813-chr5:79028624	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
C6orf62--MOB3A	1	0	1.0	0.0	ONLY_REF_SPLICE	C6orf62^ENSG00000112308.13	chr6:24708777:-	MOB3A^ENSG00000172081.14	chr19:2077013:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1241:38958:3410	.	NO_LDAS	0.0034	GT	1.9329	AG	1.7968	"[""INTERCHROMOSOMAL[chr6--chr19]""]"	chr6:24708777-chr19:2077013	False			0	Read count too low: 1 < 8	FAIL	1
C20orf27--RFESD	1	0	0.5	0.0	INCL_NON_REF_SPLICE	C20orf27^ENSG00000101220.18	chr20:3754404:-	RFESD^ENSG00000175449.14	chr5:95656529:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1235:27746:22131	.	NO_LDAS	0.0017	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr20--chr5]""]"	chr20:3754404-chr5:95656529	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
C1QTNF6--ZFYVE1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	C1QTNF6^ENSG00000133466.14	chr22:37182341:-	ZFYVE1^ENSG00000165861.14	chr14:73026977:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1370:14227:11663	.	YES_LDAS	0.0034	AT	1.8256	AC	1.4295	"[""INTERCHROMOSOMAL[chr22--chr14]""]"	chr22:37182341-chr14:73026977	False			0	Read count too low: 1 < 8	FAIL	1
C1GALT1--MSRA	1	0	1.0	0.0	ONLY_REF_SPLICE	C1GALT1^ENSG00000106392.11	chr7:7182820:+	MSRA^ENSG00000175806.15	chr8:10207833:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2446:48496:7095	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7819	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:7182820-chr8:10207833	False			0	Read count too low: 1 < 8	FAIL	1
C16orf87--TENT2	1	0	1.0	0.0	ONLY_REF_SPLICE	C16orf87^ENSG00000155330.10	chr16:46831084:-	TENT2^ENSG00000164329.13	chr5:79645123:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2472:29719:28380	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr5]""]"	chr16:46831084-chr5:79645123	False			0	Read count too low: 1 < 8	FAIL	1
C12orf75--EBLN3P	1	0	1.0	0.0	ONLY_REF_SPLICE	C12orf75^ENSG00000235162.9	chr12:105330937:+	EBLN3P^ENSG00000281649.2	chr9:37086668:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1383:45584:28926	.	YES_LDAS	0.0034	GT	1.3996	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr9]""]"	chr12:105330937-chr9:37086668	False			0	Read count too low: 1 < 8	FAIL	1
C11orf54--SYVN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	C11orf54^ENSG00000182919.15	chr11:93762514:+	SYVN1^ENSG00000162298.19	chr11:65128359:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1213:39743:6143	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTRACHROMOSOMAL[chr11:28.61Mb]""]"	chr11:93762514-chr11:65128359	False			0	Read count too low: 1 < 8	FAIL	1
C10orf88--GSDMB	1	0	1.0	0.0	ONLY_REF_SPLICE	C10orf88^ENSG00000119965.13	chr10:122954015:-	GSDMB^ENSG00000073605.18	chr17:39909924:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:25270:16133	.	NO_LDAS	0.0034	GT	1.7968	AG	1.5628	"[""INTERCHROMOSOMAL[chr10--chr17]""]"	chr10:122954015-chr17:39909924	False			0	Read count too low: 1 < 8	FAIL	1
C10orf71--CCDC114	1	0	0.5	0.0	INCL_NON_REF_SPLICE	C10orf71^ENSG00000177354.12	chr10:49325741:+	CCDC114^ENSG00000105479.16	chr19:48318554:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1451:43117:11705	.	NO_LDAS	0.0017	GT	1.5219	AG	1.7232	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:49325741-chr19:48318554	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BZW2--CRPPA	1	0	1.0	0.0	ONLY_REF_SPLICE	BZW2^ENSG00000136261.15	chr7:16646288:+	CRPPA^ENSG00000214960.11	chr7:16216197:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1321:38586:27007	.	YES_LDAS	0.0034	GT	1.9219	AG	1.6049	"[""INTRACHROMOSOMAL[chr7:0.14Mb]""]"	chr7:16646288-chr7:16216197	False			0	Read count too low: 1 < 8	FAIL	1
BX005040.4--CNTNAP3C	1	0	1.0	0.0	ONLY_REF_SPLICE	BX005040.4^ENSG00000283541.1	chr9:61104459:-	CNTNAP3C^ENSG00000283378.1	chr9:61447338:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1349:47331:14130	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9656	"[""INTRACHROMOSOMAL[chr9:0.22Mb]""]"	chr9:61104459-chr9:61447338	False			0	Read count too low: 1 < 8	FAIL	1
BTRC--RAB4A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BTRC^ENSG00000166167.18	chr10:101550822:+	RAB4A^ENSG00000168118.12	chr1:229304442:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1189:5013:27539	.	YES_LDAS	0.0034	GT	1.6402	AG	1.8323	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:101550822-chr1:229304442	False			0	Read count too low: 1 < 8	FAIL	1
BTBD8--TBK1	1	0	1.0	0.0	ONLY_REF_SPLICE	BTBD8^ENSG00000189195.15	chr1:92171460:+	TBK1^ENSG00000183735.11	chr12:64480012:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1203:47987:11145	.	NO_LDAS	0.0034	GT	1.9899	AG	1.5329	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:92171460-chr12:64480012	False			0	Read count too low: 1 < 8	FAIL	1
BRD8--ZCCHC9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BRD8^ENSG00000112983.18	chr5:138164918:-	ZCCHC9^ENSG00000131732.12	chr5:81304766:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1487:47882:3929	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTRACHROMOSOMAL[chr5:56.83Mb]""]"	chr5:138164918-chr5:81304766	False			0	Read count too low: 1 < 8	FAIL	1
BMS1P2--CDK19	1	0	1.0	0.0	ONLY_REF_SPLICE	BMS1P2^ENSG00000251079.6	chr10:47542167:-	CDK19^ENSG00000155111.15	chr6:110746201:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2349:47979:2275	.	NO_LDAS	0.0034	GT	1.7465	AG	1.1589	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:47542167-chr6:110746201	False			0	Read count too low: 1 < 8	FAIL	1
BMPR1A--COX6C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BMPR1A^ENSG00000107779.14	chr10:86921586:+	COX6C^ENSG00000164919.11	chr8:99892008:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2272:14494:10921	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr10--chr8]""]"	chr10:86921586-chr8:99892008	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BLOC1S4--TRPC3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BLOC1S4^ENSG00000186222.5	chr4:6716337:+	TRPC3^ENSG00000138741.11	chr4:121951605:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1382:8079:25620	.	NO_LDAS	0.0034	GT	1.5628	AG	1.371	"[""INTRACHROMOSOMAL[chr4:115.16Mb]""]"	chr4:6716337-chr4:121951605	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BLOC1S2--MESD	1	0	1.0	0.0	ONLY_REF_SPLICE	BLOC1S2^ENSG00000196072.12	chr10:100286097:-	MESD^ENSG00000117899.11	chr15:80952296:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1186:29970:8020	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7232	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:100286097-chr15:80952296	False			0	Read count too low: 1 < 8	FAIL	1
BLACE--INVS	1	0	1.0	0.0	ONLY_REF_SPLICE	BLACE^ENSG00000204960.7	chr7:155363104:-	INVS^ENSG00000119509.13	chr9:100226062:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2110:21379:4293	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr9]""]"	chr7:155363104-chr9:100226062	False			0	Read count too low: 1 < 8	FAIL	1
BIN3--ST7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BIN3^ENSG00000147439.13	chr8:22624206:-	ST7^ENSG00000004866.22	chr7:117209849:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1373:19575:26446	.	YES_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:22624206-chr7:117209849	False			0	Read count too low: 1 < 8	FAIL	1
BICDL1--AL139246.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BICDL1^ENSG00000135127.11	chr12:119998736:+	AL139246.3^ENSG00000228037.1	chr1:2584184:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2140:8847:25465	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr12--chr1]""]"	chr12:119998736-chr1:2584184	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BEX3--Z99755.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BEX3^ENSG00000166681.14	chrX:103377672:+	Z99755.1^ENSG00000238153.1	chr22:35165208:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1117:6388:12546	.	YES_LDAS	0.0034	GT	1.8062	AG	1.5301	"[""INTERCHROMOSOMAL[chrX--chr22]""]"	chrX:103377672-chr22:35165208	False			0	Read count too low: 1 < 8	FAIL	1
BDNF--GRIK4	1	0	0.5	0.0	INCL_NON_REF_SPLICE	BDNF^ENSG00000176697.20	chr11:27658505:-	GRIK4^ENSG00000149403.13	chr11:120956793:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1179:45163:16119	.	NO_LDAS	0.0017	AT	1.8892	AC	1.9329	"[""INTRACHROMOSOMAL[chr11:92.79Mb]""]"	chr11:27658505-chr11:120956793	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BDH1--FECH	1	0	1.0	0.0	ONLY_REF_SPLICE	BDH1^ENSG00000161267.12	chr3:197522640:-	FECH^ENSG00000066926.12	chr18:57573365:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1323:45503:9477	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr3--chr18]""]"	chr3:197522640-chr18:57573365	False			0	Read count too low: 1 < 8	FAIL	1
BCL7C--AC073046.1	1	0	1.0	0.0	ONLY_REF_SPLICE	BCL7C^ENSG00000099385.12	chr16:30888860:-	AC073046.1^ENSG00000235499.1	chr2:73985980:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2227:50567:26600	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr2]""]"	chr16:30888860-chr2:73985980	False			0	Read count too low: 1 < 8	FAIL	1
BCKDHB--AL359715.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BCKDHB^ENSG00000083123.15	chr6:80273221:+	AL359715.4^ENSG00000279022.1	chr6:80440828:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1484:8993:23672	.	YES_LDAS	0.0034	GT	1.9899	AG	1.7819	"[""INTRACHROMOSOMAL[chr6:0.09Mb]"",""NEIGHBORS[94460]""]"	chr6:80273221-chr6:80440828	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
BCKDHB--AL359715.1	1	0	1.0	0.0	ONLY_REF_SPLICE	BCKDHB^ENSG00000083123.15	chr6:80273221:+	AL359715.1^ENSG00000233967.7	chr6:80462872:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:45519:1546	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8256	"[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""NEIGHBORS[95025]""]"	chr6:80273221-chr6:80462872	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
BBS9--DTX2	1	0	1.0	0.0	ONLY_REF_SPLICE	BBS9^ENSG00000122507.21	chr7:33534176:+	DTX2^ENSG00000091073.19	chr7:76463545:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2449:21136:23041	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8323	"[""INTRACHROMOSOMAL[chr7:42.58Mb]""]"	chr7:33534176-chr7:76463545	False			0	Read count too low: 1 < 8	FAIL	1
BBS4--AC098969.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BBS4^ENSG00000140463.14	chr15:72735193:+	AC098969.1^ENSG00000285738.1	chr3:66794087:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1163:51182:4069	.	NO_LDAS	0.0034	GT	1.8323	AG	1.5546	"[""INTERCHROMOSOMAL[chr15--chr3]""]"	chr15:72735193-chr3:66794087	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BBS10--AC078820.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BBS10^ENSG00000179941.9	chr12:76332804:-	AC078820.1^ENSG00000258088.1	chr12:75694975:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:19413:22327	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5546	"[""INTRACHROMOSOMAL[chr12:0.65Mb]""]"	chr12:76332804-chr12:75694975	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
BBS10--AC078820.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	BBS10^ENSG00000179941.9	chr12:76332804:-	AC078820.1^ENSG00000258088.1	chr12:75694947:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2370:47833:2892	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr12:0.65Mb]""]"	chr12:76332804-chr12:75694947	False			0	Read count too low: 1 < 8	FAIL	1
BAZ1A--MRPS7	1	0	1.0	0.0	ONLY_REF_SPLICE	BAZ1A^ENSG00000198604.11	chr14:34874492:-	MRPS7^ENSG00000125445.11	chr17:75262497:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1111:41337:13303	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr17]""]"	chr14:34874492-chr17:75262497	False			0	Read count too low: 1 < 8	FAIL	1
BARD1--AC068051.1	1	0	1.0	0.0	ONLY_REF_SPLICE	BARD1^ENSG00000138376.11	chr2:214809412:-	AC068051.1^ENSG00000197585.10	chr2:214436317:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2180:12431:17577	.	NO_LDAS	0.0034	GT	1.5656	AG	1.9219	"[""INTRACHROMOSOMAL[chr2:0.04Mb]"",""NEIGHBORS[41400]""]"	chr2:214809412-chr2:214436317	False			0	Read count too low: 1 < 8	FAIL	1
BACH2--ANKRD6	1	0	1.0	0.0	ONLY_REF_SPLICE	BACH2^ENSG00000112182.15	chr6:90206569:-	ANKRD6^ENSG00000135299.17	chr6:89595916:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22333:2555	.	NO_LDAS	0.0034	GT	1.8892	AG	1.7968	"[""INTRACHROMOSOMAL[chr6:0.29Mb]""]"	chr6:90206569-chr6:89595916	False			0	Read count too low: 1 < 8	FAIL	1
BACE2--HMGXB4	1	0	1.0	0.0	ONLY_REF_SPLICE	BACE2^ENSG00000182240.16	chr21:41246063:+	HMGXB4^ENSG00000100281.14	chr22:35262323:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:17018:8258	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9899	"[""INTERCHROMOSOMAL[chr21--chr22]""]"	chr21:41246063-chr22:35262323	False			0	Read count too low: 1 < 8	FAIL	1
BABAM2--WARS2-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	BABAM2^ENSG00000158019.21	chr2:27988087:+	WARS2-AS1^ENSG00000231365.6	chr1:119150793:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2166:10967:23476	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr1]""]"	chr2:27988087-chr1:119150793	False			0	Read count too low: 1 < 8	FAIL	1
BABAM1--PI4KB	1	0	1.0	0.0	ONLY_REF_SPLICE	BABAM1^ENSG00000105393.16	chr19:17267527:+	PI4KB^ENSG00000143393.16	chr1:151307801:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1146:40746:26713	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:17267527-chr1:151307801	False			0	Read count too low: 1 < 8	FAIL	1
BAALC-AS1--CHCHD7	1	0	1.0	0.0	ONLY_REF_SPLICE	BAALC-AS1^ENSG00000247081.8	chr8:103246294:-	CHCHD7^ENSG00000170791.18	chr8:56217331:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1163:6250:11663	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTRACHROMOSOMAL[chr8:46.93Mb]""]"	chr8:103246294-chr8:56217331	False			0	Read count too low: 1 < 8	FAIL	1
B4GALNT1--PROC	1	0	1.0	0.0	INCL_NON_REF_SPLICE	B4GALNT1^ENSG00000135454.14	chr12:57626250:-	PROC^ENSG00000115718.18	chr2:127428766:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2171:51651:18641	.	NO_LDAS	0.0034	GT	1.5546	AG	1.6729	"[""INTERCHROMOSOMAL[chr12--chr2]""]"	chr12:57626250-chr2:127428766	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AXDND1--SOAT1	1	0	1.0	0.0	ONLY_REF_SPLICE	AXDND1^ENSG00000162779.22	chr1:179370078:+	SOAT1^ENSG00000057252.13	chr1:179337837:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:37429:5442	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7040]""]"	chr1:179370078-chr1:179337837	False			0	Read count too low: 1 < 8	FAIL	1
AUP1--LINC02667	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AUP1^ENSG00000115307.17	chr2:74527940:-	LINC02667^ENSG00000224190.2	chr10:128915668:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1415:42332:2752	.	NO_LDAS	0.0034	GT	1.9656	AG	1.3996	"[""INTERCHROMOSOMAL[chr2--chr10]""]"	chr2:74527940-chr10:128915668	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ATPSCKMT--KYNU	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATPSCKMT^ENSG00000150756.14	chr5:10227281:-	KYNU^ENSG00000115919.15	chr2:143053226:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2398:28053:10444	.	NO_LDAS	0.0034	GT	1.2419	AG	1.8892	"[""INTERCHROMOSOMAL[chr5--chr2]""]"	chr5:10227281-chr2:143053226	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ATP6V0A1--JAK3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATP6V0A1^ENSG00000033627.17	chr17:42494473:+	JAK3^ENSG00000105639.20	chr19:17844403:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1309:22050:2429	.	NO_LDAS	0.0034	GT	1.3996	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr19]""]"	chr17:42494473-chr19:17844403	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ATP5PB--GPD2	1	0	1.0	0.0	ONLY_REF_SPLICE	ATP5PB^ENSG00000116459.11	chr1:111449873:+	GPD2^ENSG00000115159.16	chr2:156476098:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1222:34396:8483	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:111449873-chr2:156476098	False			0	Read count too low: 1 < 8	FAIL	1
ATP5PB--ATP5PBP2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ATP5PB^ENSG00000116459.11	chr1:111456249:+	ATP5PBP2^ENSG00000214342.2	chr7:94739032:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2386:5538:4433	.	NO_LDAS	0.0017	GT	1.8295	AG	1.6402	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:111456249-chr7:94739032	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ATP5MD--RNF7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATP5MD^ENSG00000173915.16	chr10:103392191:-	RNF7^ENSG00000114125.14	chr3:141747123:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1321:47372:26530	.	YES_LDAS	0.0034	GT	1.6049	AG	1.6402	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:103392191-chr3:141747123	False			0	Read count too low: 1 < 8	FAIL	1
ATP5MC1--VPS54	1	0	1.0	0.0	ONLY_REF_SPLICE	ATP5MC1^ENSG00000159199.14	chr17:48895334:+	VPS54^ENSG00000143952.20	chr2:63914287:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2186:48092:18473	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9219	"[""INTERCHROMOSOMAL[chr17--chr2]""]"	chr17:48895334-chr2:63914287	False			0	Read count too low: 1 < 8	FAIL	1
ATP5F1C--PLEKHA1	1	0	1.0	0.0	ONLY_REF_SPLICE	ATP5F1C^ENSG00000165629.20	chr10:7796155:+	PLEKHA1^ENSG00000107679.14	chr10:122406576:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1354:13410:9828	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8062	"[""INTRACHROMOSOMAL[chr10:114.57Mb]""]"	chr10:7796155-chr10:122406576	False			0	Read count too low: 1 < 8	FAIL	1
ATP5F1C--DAD1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ATP5F1C^ENSG00000165629.20	chr10:7799181:+	DAD1^ENSG00000129562.11	chr14:22589034:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2368:3419:19510	.	YES_LDAS	0.0017	GC	1.7968	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr14]""]"	chr10:7799181-chr14:22589034	False			0	Read count too low: 1 < 8	FAIL	1
ATP11C--MTMR1	1	0	1.0	0.0	ONLY_REF_SPLICE	ATP11C^ENSG00000101974.14	chrX:139782547:-	MTMR1^ENSG00000063601.17	chrX:150699195:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2433:40034:8581	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTRACHROMOSOMAL[chrX:10.75Mb]""]"	chrX:139782547-chrX:150699195	False			0	Read count too low: 1 < 8	FAIL	1
ATG5--STX7	1	0	1.0	0.0	ONLY_REF_SPLICE	ATG5^ENSG00000057663.16	chr6:106316101:-	STX7^ENSG00000079950.14	chr6:132503588:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2322:11978:16343	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr6:26.12Mb]""]"	chr6:106316101-chr6:132503588	False			0	Read count too low: 1 < 8	FAIL	1
ATG4C--APIP	1	0	1.0	0.0	ONLY_REF_SPLICE	ATG4C^ENSG00000125703.15	chr1:62805255:+	APIP^ENSG00000149089.13	chr11:34895110:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1165:4851:13611	.	YES_LDAS	0.0034	GT	1.4295	AG	1.8062	"[""INTERCHROMOSOMAL[chr1--chr11]""]"	chr1:62805255-chr11:34895110	False			0	Read count too low: 1 < 8	FAIL	1
ATF3--ST7L	1	0	1.0	0.0	ONLY_REF_SPLICE	ATF3^ENSG00000162772.17	chr1:212615261:+	ST7L^ENSG00000007341.19	chr1:112611003:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:14478:15461	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5656	"[""INTRACHROMOSOMAL[chr1:99.94Mb]""]"	chr1:212615261-chr1:112611003	False			0	Read count too low: 1 < 8	FAIL	1
ATF2--SETBP1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ATF2^ENSG00000115966.17	chr2:175097444:-	SETBP1^ENSG00000152217.20	chr18:44952879:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2126:26071:25956	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr2--chr18]""]"	chr2:175097444-chr18:44952879	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ATE1-AS1--RBP7	1	0	1.0	0.0	ONLY_REF_SPLICE	ATE1-AS1^ENSG00000226864.2	chr10:121928634:+	RBP7^ENSG00000162444.12	chr1:10015782:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1379:33829:24485	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8256	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:121928634-chr1:10015782	False			0	Read count too low: 1 < 8	FAIL	1
ASS1P5--GSTO1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ASS1P5^ENSG00000227881.1	chrX:115665106:+	GSTO1^ENSG00000148834.13	chr10:104255163:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2196:48367:10907	.	NO_LDAS	0.0034	GT	1.5301	AG	1.4295	"[""INTERCHROMOSOMAL[chrX--chr10]""]"	chrX:115665106-chr10:104255163	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ASNSD1--ANKAR	1	0	1.0	0.0	ONLY_REF_SPLICE	ASNSD1^ENSG00000138381.10	chr2:189667945:+	ANKAR^ENSG00000151687.14	chr2:189689527:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1172:44832:29025	.	YES_LDAS	0.0034	GT	1.5329	AG	1.7465	"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""NEIGHBORS[3459]""]"	chr2:189667945-chr2:189689527	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ASH2L--RPS3AP26	1	0	0.33	0.0	INCL_NON_REF_SPLICE	ASH2L^ENSG00000129691.16	chr8:38128824:+	RPS3AP26^ENSG00000214389.2	chr7:98386527:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1286:15691:20113	.	NO_LDAS	0.0011	GT	1.371	AG	1.9329	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:38128824-chr7:98386527	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ASH1L-AS1--HSD17B14	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ASH1L-AS1^ENSG00000235919.4	chr1:155563329:+	HSD17B14^ENSG00000087076.9	chr19:48815141:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2256:29558:5512	.	YES_LDAS	0.0034	GT	1.9219	AG	1.3753	"[""INTERCHROMOSOMAL[chr1--chr19]""]"	chr1:155563329-chr19:48815141	False			0	Read count too low: 1 < 8	FAIL	1
ASB7--NAA35	1	0	1.0	0.0	ONLY_REF_SPLICE	ASB7^ENSG00000183475.13	chr15:100630042:+	NAA35^ENSG00000135040.16	chr9:85974967:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:17973:17619	.	YES_LDAS	0.0034	GT	1.7232	AG	1.9086	"[""INTERCHROMOSOMAL[chr15--chr9]""]"	chr15:100630042-chr9:85974967	False			0	Read count too low: 1 < 8	FAIL	1
ASB7--ACVR1C	1	0	1.0	0.0	ONLY_REF_SPLICE	ASB7^ENSG00000183475.13	chr15:100612427:+	ACVR1C^ENSG00000123612.16	chr2:157587417:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2267:32478:7516	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr15--chr2]""]"	chr15:100612427-chr2:157587417	False			0	Read count too low: 1 < 8	FAIL	1
ARTN--NHLH1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARTN^ENSG00000117407.17	chr1:43935716:+	NHLH1^ENSG00000171786.6	chr1:160372703:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2405:29784:20337	.	NO_LDAS	0.0034	GT	1.8892	AG	1.6729	"[""INTRACHROMOSOMAL[chr1:116.43Mb]""]"	chr1:43935716-chr1:160372703	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARSJ--AC092567.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARSJ^ENSG00000180801.14	chr4:113978980:-	AC092567.1^ENSG00000226605.1	chr2:62826072:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1157:26564:2121	.	NO_LDAS	0.0034	GT	1.7819	AG	1.2419	"[""INTERCHROMOSOMAL[chr4--chr2]""]"	chr4:113978980-chr2:62826072	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARSG--UVRAG	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARSG^ENSG00000141337.13	chr17:68401450:+	UVRAG^ENSG00000198382.9	chr11:75979911:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1198:40228:25451	.	NO_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:68401450-chr11:75979911	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARPC5L--YY1AP1	1	0	1.0	0.0	ONLY_REF_SPLICE	ARPC5L^ENSG00000136950.13	chr9:124864107:+	YY1AP1^ENSG00000163374.20	chr1:155675096:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1202:8564:18782	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTERCHROMOSOMAL[chr9--chr1]""]"	chr9:124864107-chr1:155675096	False			0	Read count too low: 1 < 8	FAIL	1
ARMH3--FLCN	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARMH3^ENSG00000120029.13	chr10:101956597:-	FLCN^ENSG00000154803.13	chr17:17212617:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1284:18701:25886	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr10--chr17]""]"	chr10:101956597-chr17:17212617	False			0	Read count too low: 1 < 8	FAIL	1
ARMH3--CBWD2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARMH3^ENSG00000120029.13	chr10:101889733:-	CBWD2^ENSG00000136682.15	chr2:113460680:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1198:16112:18571	.	NO_LDAS	0.0034	GT	1.6402	AG	1.7465	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:101889733-chr2:113460680	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARMC4--SLC12A1	1	0	1.0	0.0	ONLY_REF_SPLICE	ARMC4^ENSG00000169126.16	chr10:27907663:-	SLC12A1^ENSG00000074803.20	chr15:48217832:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:21581:28969	.	NO_LDAS	0.0034	GT	1.6049	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:27907663-chr15:48217832	False			0	Read count too low: 1 < 8	FAIL	1
ARMC4--DPM1	1	0	1.0	0.0	ONLY_REF_SPLICE	ARMC4^ENSG00000169126.16	chr10:27853242:-	DPM1^ENSG00000000419.13	chr20:50948662:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1140:16242:21374	.	NO_LDAS	0.0034	GC	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr10--chr20]""]"	chr10:27853242-chr20:50948662	False			0	Read count too low: 1 < 8	FAIL	1
ARL8B--MTMR14	1	0	1.0	0.0	ONLY_REF_SPLICE	ARL8B^ENSG00000134108.14	chr3:5122588:+	MTMR14^ENSG00000163719.20	chr3:9653621:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1204:49985:6171	.	YES_LDAS	0.0034	GT	1.9899	AG	1.8892	"[""INTRACHROMOSOMAL[chr3:4.47Mb]""]"	chr3:5122588-chr3:9653621	False			0	Read count too low: 1 < 8	FAIL	1
ARL3--EIF4E2	1	0	1.0	0.0	ONLY_REF_SPLICE	ARL3^ENSG00000138175.9	chr10:102685816:-	EIF4E2^ENSG00000135930.14	chr2:232564247:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1403:31507:1210	.	YES_LDAS	0.0034	GT	1.7232	AG	1.7968	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:102685816-chr2:232564247	False			0	Read count too low: 1 < 8	FAIL	1
ARL2--AP005264.4	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ARL2^ENSG00000213465.8	chr11:65021742:+	AP005264.4^ENSG00000267733.5	chr18:12222889:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1416:39792:20435	.	NO_LDAS	0.0017	GC	1.9219	AG	1.6895	"[""INTERCHROMOSOMAL[chr11--chr18]""]"	chr11:65021742-chr18:12222889	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARL17A--RPS6KC1	1	0	0.5	0.0	ONLY_REF_SPLICE	ARL17A^ENSG00000185829.18	chr17:46570759:-	RPS6KC1^ENSG00000136643.12	chr1:213242569:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2387:3289:13933	.	YES_LDAS	0.0017	GT	1.6402	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:46570759-chr1:213242569	False			0	Read count too low: 1 < 8	FAIL	1
ARL13B--SRFBP1	1	0	1.0	0.0	ONLY_REF_SPLICE	ARL13B^ENSG00000169379.17	chr3:94003908:+	SRFBP1^ENSG00000151304.6	chr5:122019260:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2158:30690:24148	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr5]""]"	chr3:94003908-chr5:122019260	False			0	Read count too low: 1 < 8	FAIL	1
ARL1--CEBPA	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARL1^ENSG00000120805.14	chr12:101402865:-	CEBPA^ENSG00000245848.3	chr19:33302352:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1322:44403:16315	.	NO_LDAS	0.0034	GT	1.8295	AG	1.053	"[""INTERCHROMOSOMAL[chr12--chr19]""]"	chr12:101402865-chr19:33302352	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARID5A--SEMA4C	1	0	1.0	0.0	ONLY_REF_SPLICE	ARID5A^ENSG00000196843.17	chr2:96536830:+	SEMA4C^ENSG00000168758.11	chr2:96865929:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1121:44589:2205	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTRACHROMOSOMAL[chr2:0.31Mb]""]"	chr2:96536830-chr2:96865929	False			0	Read count too low: 1 < 8	FAIL	1
ARID3C--DCTN3	1	0	1.0	0.0	ONLY_REF_SPLICE	ARID3C^ENSG00000205143.3	chr9:34627697:-	DCTN3^ENSG00000137100.16	chr9:34618760:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2198:16339:20533	.	YES_LDAS	0.0034	GT	1.8295	AG	1.7465	"[""Babiceanu_Normal"",""INTRACHROMOSOMAL[chr9:0.00Mb]"",""NEIGHBORS[856]""]"	chr9:34627697-chr9:34618760	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ARHGEF35-AS1--ARHGEF5	1	0	0.25	0.0	ONLY_REF_SPLICE	ARHGEF35-AS1^ENSG00000244198.7	chr7:144239388:+	ARHGEF5^ENSG00000050327.15	chr7:144362658:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1247:39525:19664	.	YES_LDAS	0.0008	GT	1.9329	AG	1.9899	"[""INTRACHROMOSOMAL[chr7:0.07Mb]"",""NEIGHBORS[74741]""]"	chr7:144239388-chr7:144362658	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ARHGAP42--AC073869.1	1	0	0.33	0.0	ONLY_REF_SPLICE	ARHGAP42^ENSG00000165895.19	chr11:100687832:+	AC073869.1^ENSG00000273073.1	chr2:131462125:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1239:46045:6689	.	YES_LDAS	0.0011	GT	1.6402	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr2]""]"	chr11:100687832-chr2:131462125	False			0	Read count too low: 1 < 8	FAIL	1
ARHGAP19--SLIT1	1	0	1.0	0.0	ONLY_REF_SPLICE	ARHGAP19^ENSG00000213390.11	chr10:97229147:-	SLIT1^ENSG00000187122.17	chr10:97164890:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1167:26710:29025	.	NO_LDAS	0.0034	GT	0.971	AG	1.8892	"[""ConjoinG"",""Greger_Normal"",""INTRACHROMOSOMAL[chr10:0.04Mb]"",""NEIGHBORS[36214]""]"	chr10:97229147-chr10:97164890	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ARG1--AL163540.1	1	0	0.07	0.0	ONLY_REF_SPLICE	ARG1^ENSG00000118520.15	chr6:131547198:+	AL163540.1^ENSG00000204790.9	chr9:63986283:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1441:22689:3760	.	YES_LDAS	0.0002	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr9]""]"	chr6:131547198-chr9:63986283	False			0	Read count too low: 1 < 8	FAIL	1
ARAF--AC019193.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ARAF^ENSG00000078061.14	chrX:47563329:+	AC019193.4^ENSG00000286821.1	chr4:183020393:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1447:48140:4545	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9219	"[""INTERCHROMOSOMAL[chrX--chr4]""]"	chrX:47563329-chr4:183020393	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ARAF--ABITRAM	1	0	1.0	0.0	ONLY_REF_SPLICE	ARAF^ENSG00000078061.14	chrX:47563329:+	ABITRAM^ENSG00000119328.12	chr9:108936308:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1449:1154:13485	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chrX--chr9]""]"	chrX:47563329-chr9:108936308	False			0	Read count too low: 1 < 8	FAIL	1
APIP--DNAAF4	1	0	1.0	0.0	ONLY_REF_SPLICE	APIP^ENSG00000149089.13	chr11:34916228:-	DNAAF4^ENSG00000256061.7	chr15:55467161:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1215:39306:8889	.	NO_LDAS	0.0034	GT	1.7465	AG	1.3996	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:34916228-chr15:55467161	False			0	Read count too low: 1 < 8	FAIL	1
APIP--DEPDC7	1	0	1.0	0.0	ONLY_REF_SPLICE	APIP^ENSG00000149089.13	chr11:34916228:-	DEPDC7^ENSG00000121690.11	chr11:33025659:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1370:9317:17002	.	YES_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:1.82Mb]""]"	chr11:34916228-chr11:33025659	False			0	Read count too low: 1 < 8	FAIL	1
APIP--CAT	1	0	1.0	0.0	ONLY_REF_SPLICE	APIP^ENSG00000149089.13	chr11:34916228:-	CAT^ENSG00000121691.7	chr11:34449192:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1472:43505:19496	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9899	"[""INTRACHROMOSOMAL[chr11:0.38Mb]""]"	chr11:34916228-chr11:34449192	False			0	Read count too low: 1 < 8	FAIL	1
AP4B1--DNTTIP2	1	0	1.0	0.0	ONLY_REF_SPLICE	AP4B1^ENSG00000134262.13	chr1:113904605:-	DNTTIP2^ENSG00000067334.14	chr1:93873214:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2325:43917:11719	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:20.01Mb]""]"	chr1:113904605-chr1:93873214	False			0	Read count too low: 1 < 8	FAIL	1
AP006621.1--AC112504.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP006621.1^ENSG00000255108.1	chr11:824521:-	AC112504.1^ENSG00000279147.1	chr3:141937814:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1175:30035:27357	.	NO_LDAS	0.0034	GC	1.7465	AG	1.7232	"[""INTERCHROMOSOMAL[chr11--chr3]""]"	chr11:824521-chr3:141937814	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AP003778.1--MEIS2	1	0	1.0	0.0	ONLY_REF_SPLICE	AP003778.1^ENSG00000287264.1	chr11:59545975:+	MEIS2^ENSG00000134138.20	chr15:36950400:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:16031:18627	.	YES_LDAS	0.0034	GT	1.3996	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:59545975-chr15:36950400	False			0	Read count too low: 1 < 8	FAIL	1
AP003108.2--PPP1R32	1	0	1.0	0.0	ONLY_REF_SPLICE	AP003108.2^ENSG00000256591.5	chr11:61438113:+	PPP1R32^ENSG00000162148.11	chr11:61484688:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1323:32244:1841	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]"	chr11:61438113-chr11:61484688	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AP003108.2--PPP1R32	1	0	1.0	0.0	ONLY_REF_SPLICE	AP003108.2^ENSG00000256591.5	chr11:61438113:+	PPP1R32^ENSG00000162148.11	chr11:61481782:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1128:9681:24471	.	NO_LDAS	0.0034	GT	1.9329	AG	1.3996	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""NEIGHBORS[12404]""]"	chr11:61438113-chr11:61481782	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AP002985.1--USP35	1	0	1.0	0.0	ONLY_REF_SPLICE	AP002985.1^ENSG00000288538.1	chr11:78224729:+	USP35^ENSG00000118369.13	chr11:78213646:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1101:32397:7964	.	YES_LDAS	0.0034	GT	1.8892	AG	1.2729	"[""INTRACHROMOSOMAL[chr11:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8583]""]"	chr11:78224729-chr11:78213646	False			0	Read count too low: 1 < 8	FAIL	1
AP002812.5--GNB5	1	0	0.33	0.0	INCL_NON_REF_SPLICE	AP002812.5^ENSG00000255449.1	chr11:77869695:-	GNB5^ENSG00000069966.19	chr15:52117054:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:15635:17941	.	NO_LDAS	0.0011	GT	1.5329	AG	1.7465	"[""INTERCHROMOSOMAL[chr11--chr15]""]"	chr11:77869695-chr15:52117054	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AP001977.1--PACSIN3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001977.1^ENSG00000286044.1	chr11:121928207:+	PACSIN3^ENSG00000165912.16	chr11:47182764:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1475:31960:10514	.	YES_LDAS	0.0034	GT	1.9329	AG	1.4716	"[""INTRACHROMOSOMAL[chr11:74.49Mb]""]"	chr11:121928207-chr11:47182764	False			0	Read count too low: 1 < 8	FAIL	1
AP001924.1--ZNF407	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001924.1^ENSG00000286023.1	chr11:121979703:-	ZNF407^ENSG00000215421.9	chr18:74781428:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1235:23879:4699	.	YES_LDAS	0.0034	GT	1.7968	AG	1.6402	"[""INTERCHROMOSOMAL[chr11--chr18]""]"	chr11:121979703-chr18:74781428	False			0	Read count too low: 1 < 8	FAIL	1
AP001924.1--UVRAG	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001924.1^ENSG00000286023.1	chr11:121979703:-	UVRAG^ENSG00000198382.9	chr11:76065710:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2234:15926:23630	.	YES_LDAS	0.0034	GT	1.7968	AG	1.8323	"[""INTRACHROMOSOMAL[chr11:45.84Mb]""]"	chr11:121979703-chr11:76065710	False			0	Read count too low: 1 < 8	FAIL	1
AP001924.1--GKAP1	1	0	1.0	0.0	ONLY_REF_SPLICE	AP001924.1^ENSG00000286023.1	chr11:122025864:-	GKAP1^ENSG00000165113.13	chr9:83753359:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1421:30011:21206	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr11--chr9]""]"	chr11:122025864-chr9:83753359	False			0	Read count too low: 1 < 8	FAIL	1
AP001453.2--MIS12	1	0	1.0	0.0	ONLY_REF_SPLICE	AP001453.2^ENSG00000257086.1	chr11:64248050:-	MIS12^ENSG00000167842.16	chr17:5488823:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:30189:27848	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9219	"[""INTERCHROMOSOMAL[chr11--chr17]""]"	chr11:64248050-chr17:5488823	False			0	Read count too low: 1 < 8	FAIL	1
AP001453.1--BAD	1	0	1.0	0.0	ONLY_REF_SPLICE	AP001453.1^ENSG00000256116.1	chr11:64234194:-	BAD^ENSG00000002330.14	chr11:64271803:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1102:1251:13569	.	YES_LDAS	0.0034	GT	1.7465	AG	1.371	"[""INTRACHROMOSOMAL[chr11:0.04Mb]"",""LOCAL_REARRANGEMENT:-:[35478]""]"	chr11:64234194-chr11:64271803	False			0	Read count too low: 1 < 8	FAIL	1
AP001122.1--AC097500.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001122.1^ENSG00000245008.4	chr11:128651857:-	AC097500.1^ENSG00000287129.1	chr2:185952902:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1176:8694:15503	.	YES_LDAS	0.0034	GT	1.9899	AG	1.7465	"[""INTERCHROMOSOMAL[chr11--chr2]""]"	chr11:128651857-chr2:185952902	False			0	Read count too low: 1 < 8	FAIL	1
AP001029.2--PRELID3A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AP001029.2^ENSG00000267199.1	chr18:12447619:+	PRELID3A^ENSG00000141391.14	chr18:12421540:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2459:6906:6521	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9329	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr18:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[6652]""]"	chr18:12447619-chr18:12421540	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
AP000487.1--IMMP2L	1	0	1.0	0.0	ONLY_REF_SPLICE	AP000487.1^ENSG00000246889.2	chr11:70398098:-	IMMP2L^ENSG00000184903.10	chr7:111561923:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1101:15772:24429	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr11--chr7]""]"	chr11:70398098-chr7:111561923	False			0	Read count too low: 1 < 8	FAIL	1
AOPEP--CYP27A1	1	0	1.0	0.0	ONLY_REF_SPLICE	AOPEP^ENSG00000148120.17	chr9:95005616:+	CYP27A1^ENSG00000135929.9	chr2:218809577:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2179:44735:2962	.	YES_LDAS	0.0034	GT	1.5656	AG	1.9899	"[""INTERCHROMOSOMAL[chr9--chr2]""]"	chr9:95005616-chr2:218809577	False			0	Read count too low: 1 < 8	FAIL	1
ANXA6--FAM210B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANXA6^ENSG00000197043.14	chr5:151117764:-	FAM210B^ENSG00000124098.10	chr20:56358976:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1232:10562:16610	.	YES_LDAS	0.0034	GC	1.6895	AG	1.3996	"[""INTERCHROMOSOMAL[chr5--chr20]""]"	chr5:151117764-chr20:56358976	False			0	Read count too low: 1 < 8	FAIL	1
ANKS3--ZNF500	1	0	1.0	0.0	ONLY_REF_SPLICE	ANKS3^ENSG00000168096.15	chr16:4729980:-	ZNF500^ENSG00000103199.14	chr16:4762756:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1147:26144:3298	.	NO_LDAS	0.0034	GT	1.7232	AG	1.9329	"[""TumorFusionsNAR2018"",""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[13861]""]"	chr16:4729980-chr16:4762756	False			0	Read count too low: 1 < 8	FAIL	1
ANKRD42--CCDC90B	1	0	1.0	0.0	ONLY_REF_SPLICE	ANKRD42^ENSG00000137494.14	chr11:83211430:+	CCDC90B^ENSG00000137500.9	chr11:83278829:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2458:36378:23097	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTRACHROMOSOMAL[chr11:0.00Mb]"",""NEIGHBORS_OVERLAP:+:-:[1597]""]"	chr11:83211430-chr11:83278829	False			0	Read count too low: 1 < 8	FAIL	1
ANKRD13C--FAM106A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANKRD13C^ENSG00000118454.13	chr1:70336058:-	FAM106A^ENSG00000273018.7	chr17:18524921:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:31216:28786	.	NO_LDAS	0.0034	GT	1.5301	AG	1.9899	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:70336058-chr17:18524921	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ANKDD1B--POLK	1	0	1.0	0.0	ONLY_REF_SPLICE	ANKDD1B^ENSG00000189045.15	chr5:75625955:+	POLK^ENSG00000122008.15	chr5:75593878:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2259:51927:13233	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9899	"[""INTRACHROMOSOMAL[chr5:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[10038]""]"	chr5:75625955-chr5:75593878	False			0	Read count too low: 1 < 8	FAIL	1
ANKDD1A--PLEKHO2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANKDD1A^ENSG00000166839.17	chr15:64934234:+	PLEKHO2^ENSG00000241839.10	chr15:64826338:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1254:6331:21864	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""TumorFusionsNAR2018"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr15:0.04Mb]"",""LOCAL_REARRANGEMENT:+:[43900]""]"	chr15:64934234-chr15:64826338	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ANKDD1A--LRP4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANKDD1A^ENSG00000166839.17	chr15:64943582:+	LRP4^ENSG00000134569.10	chr11:46889536:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1273:6032:6773	.	NO_LDAS	0.0034	GT	1.7968	AG	1.8062	"[""INTERCHROMOSOMAL[chr15--chr11]""]"	chr15:64943582-chr11:46889536	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ANKAR--ASNSD1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ANKAR^ENSG00000151687.14	chr2:189738682:+	ASNSD1^ENSG00000138381.10	chr2:189667169:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2192:13855:25283	.	YES_LDAS	0.0034	GT	1.9219	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3459]""]"	chr2:189738682-chr2:189667169	False			0	Read count too low: 1 < 8	FAIL	1
AMOT--EDC3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AMOT^ENSG00000126016.16	chrX:112805080:-	EDC3^ENSG00000179151.13	chr15:74630897:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2184:17714:14452	.	NO_LDAS	0.0034	GC	1.5546	AG	1.7968	"[""INTERCHROMOSOMAL[chrX--chr15]""]"	chrX:112805080-chr15:74630897	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AMMECR1--TMEM164	1	0	1.0	0.0	ONLY_REF_SPLICE	AMMECR1^ENSG00000101935.11	chrX:110264489:-	TMEM164^ENSG00000157600.12	chrX:110171420:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1363:26831:22004	.	YES_LDAS	0.0034	GT	1.9086	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.01Mb]"",""LOCAL_INVERSION:-:+:[11452]""]"	chrX:110264489-chrX:110171420	False			0	Read count too low: 1 < 8	FAIL	1
AMDHD2--NECAB3	1	0	1.0	0.0	ONLY_REF_SPLICE	AMDHD2^ENSG00000162066.16	chr16:2521123:+	NECAB3^ENSG00000125967.17	chr20:33660395:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1245:38538:16385	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7465	"[""INTERCHROMOSOMAL[chr16--chr20]""]"	chr16:2521123-chr20:33660395	False			0	Read count too low: 1 < 8	FAIL	1
ALPK1--HIBCH	1	0	1.0	0.0	ONLY_REF_SPLICE	ALPK1^ENSG00000073331.18	chr4:112441105:+	HIBCH^ENSG00000198130.16	chr2:190204802:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2414:10926:13961	.	NO_LDAS	0.0034	GT	1.8295	AG	1.6402	"[""INTERCHROMOSOMAL[chr4--chr2]""]"	chr4:112441105-chr2:190204802	False			0	Read count too low: 1 < 8	FAIL	1
ALOX5--CFLAR-AS1	1	0	1.0	0.0	ONLY_REF_SPLICE	ALOX5^ENSG00000012779.11	chr10:45428764:+	CFLAR-AS1^ENSG00000226312.7	chr2:201151259:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2372:41215:28955	.	YES_LDAS	0.0034	GT	1.8295	AG	1.9899	"[""INTERCHROMOSOMAL[chr10--chr2]""]"	chr10:45428764-chr2:201151259	False			0	Read count too low: 1 < 8	FAIL	1
ALG6--AL162511.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ALG6^ENSG00000088035.18	chr1:63414146:+	AL162511.1^ENSG00000258844.2	chr14:36214300:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:29776:22957	.	NO_LDAS	0.0034	GT	1.7968	AG	0.6998	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:63414146-chr14:36214300	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ALG3--GOLGA8M	1	0	0.5	0.0	ONLY_REF_SPLICE	ALG3^ENSG00000214160.10	chr3:184244601:-	GOLGA8M^ENSG00000188626.6	chr15:28703917:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1374:3734:24204	.	YES_LDAS	0.0017	GT	1.8256	AG	1.9329	"[""INTERCHROMOSOMAL[chr3--chr15]""]"	chr3:184244601-chr15:28703917	False			0	Read count too low: 1 < 8	FAIL	1
ALDH9A1--RO60	1	0	1.0	0.0	ONLY_REF_SPLICE	ALDH9A1^ENSG00000143149.12	chr1:165695252:-	RO60^ENSG00000116747.13	chr1:193075820:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1437:50915:28997	.	NO_LDAS	0.0034	GT	1.8323	AG	1.9329	"[""INTRACHROMOSOMAL[chr1:27.36Mb]""]"	chr1:165695252-chr1:193075820	False			0	Read count too low: 1 < 8	FAIL	1
ALDH2--ANK2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ALDH2^ENSG00000111275.13	chr12:111782022:+	ANK2^ENSG00000145362.20	chr4:113258267:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1254:2756:14130	.	YES_LDAS	0.0034	GT	1.6895	AG	1.7465	"[""INTERCHROMOSOMAL[chr12--chr4]""]"	chr12:111782022-chr4:113258267	False			0	Read count too low: 1 < 8	FAIL	1
AL596202.1--SDE2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL596202.1^ENSG00000235381.1	chr6:155254285:-	SDE2^ENSG00000143751.10	chr1:225991254:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:23523:2065	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9086	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:155254285-chr1:225991254	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL590714.1--SNHG9	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL590714.1^ENSG00000224985.1	chr1:161153898:-	SNHG9^ENSG00000255198.4	chr16:1965406:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1121:43699:27960	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8295	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:161153898-chr16:1965406	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL590666.4--RRNAD1	1	0	1.0	0.0	ONLY_REF_SPLICE	AL590666.4^ENSG00000285570.1	chr1:156689824:+	RRNAD1^ENSG00000143303.12	chr1:156731991:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1393:42081:7754	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9086	"[""INTRACHROMOSOMAL[chr1:0.02Mb]"",""NEIGHBORS[23685]""]"	chr1:156689824-chr1:156731991	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL590635.1--RABGAP1L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL590635.1^ENSG00000219867.1	chr6:91816008:-	RABGAP1L^ENSG00000152061.23	chr1:174250475:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1369:21015:29669	.	NO_LDAS	0.0034	GT	1.5628	AG	1.8256	"[""INTERCHROMOSOMAL[chr6--chr1]""]"	chr6:91816008-chr1:174250475	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL450322.2--WDR62	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL450322.2^ENSG00000229672.3	chr10:3763430:+	WDR62^ENSG00000075702.19	chr19:36103003:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:23579:14578	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9899	"[""INTERCHROMOSOMAL[chr10--chr19]""]"	chr10:3763430-chr19:36103003	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL391058.1--AC117481.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL391058.1^ENSG00000232499.2	chr1:113449897:+	AC117481.1^ENSG00000287398.1	chr3:75214533:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1310:34970:1154	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9086	"[""INTERCHROMOSOMAL[chr1--chr3]""]"	chr1:113449897-chr3:75214533	False			0	Read count too low: 1 < 8	FAIL	1
AL359715.1--BCKDHB	1	0	1.0	0.0	ONLY_REF_SPLICE	AL359715.1^ENSG00000233967.7	chr6:80454227:+	BCKDHB^ENSG00000083123.15	chr6:80343664:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2195:9867:18319	.	YES_LDAS	0.0034	GT	1.7819	AG	1.7819	"[""INTRACHROMOSOMAL[chr6:0.10Mb]"",""LOCAL_REARRANGEMENT:+:[95025]""]"	chr6:80454227-chr6:80343664	False			0	Read count too low: 1 < 8	FAIL	1
AL358113.1--ZNF702P	1	0	1.0	0.0	ONLY_REF_SPLICE	AL358113.1^ENSG00000285130.2	chr9:69100061:+	ZNF702P^ENSG00000242779.7	chr19:52970842:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1215:15489:8917	.	YES_LDAS	0.0034	GT	1.8892	AG	1.5656	"[""INTERCHROMOSOMAL[chr9--chr19]""]"	chr9:69100061-chr19:52970842	False			0	Read count too low: 1 < 8	FAIL	1
AL356534.1--RBM6	1	0	1.0	0.0	ONLY_REF_SPLICE	AL356534.1^ENSG00000286215.1	chr6:126819392:-	RBM6^ENSG00000004534.15	chr3:50048245:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2433:40681:19370	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr6--chr3]""]"	chr6:126819392-chr3:50048245	False			0	Read count too low: 1 < 8	FAIL	1
AL356157.3--SLC35A5	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL356157.3^ENSG00000287173.1	chr10:44510360:+	SLC35A5^ENSG00000138459.9	chr3:112573889:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1308:44023:10781	.	NO_LDAS	0.0034	GT	1.8256	AG	1.9329	"[""INTERCHROMOSOMAL[chr10--chr3]""]"	chr10:44510360-chr3:112573889	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL355379.1--JKAMP	1	0	0.33	0.0	INCL_NON_REF_SPLICE	AL355379.1^ENSG00000217786.1	chr6:79326596:-	JKAMP^ENSG00000050130.18	chr14:59486731:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2144:33902:2611	.	YES_LDAS	0.0011	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr6--chr14]""]"	chr6:79326596-chr14:59486731	False			0	Read count too low: 1 < 8	FAIL	1
AL354919.1--TRIM32	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL354919.1^ENSG00000203620.2	chr1:31842939:-	TRIM32^ENSG00000119401.11	chr9:116698533:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1178:46223:8286	.	NO_LDAS	0.0034	GT	1.4295	AG	1.9219	"[""INTERCHROMOSOMAL[chr1--chr9]""]"	chr1:31842939-chr9:116698533	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL353796.1--OTUD7B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL353796.1^ENSG00000259994.1	chr10:30305298:-	OTUD7B^ENSG00000264522.6	chr1:149944663:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1171:12286:27777	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr10--chr1]""]"	chr10:30305298-chr1:149944663	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL353576.1--PTER	1	0	1.0	0.0	ONLY_REF_SPLICE	AL353576.1^ENSG00000287925.1	chr10:16527751:+	PTER^ENSG00000165983.15	chr10:16505020:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2141:32899:21780	.	YES_LDAS	0.0034	GT	1.4295	AG	1.8323	"[""INTRACHROMOSOMAL[chr10:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[7969]""]"	chr10:16527751-chr10:16505020	False			0	Read count too low: 1 < 8	FAIL	1
AL160286.2--ARID4A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL160286.2^ENSG00000261060.1	chr1:179590936:+	ARID4A^ENSG00000032219.19	chr14:58365518:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1276:11250:14914	.	NO_LDAS	0.0034	GT	0.9183	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr14]""]"	chr1:179590936-chr14:58365518	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL139353.1--ZNF675	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL139353.1^ENSG00000203546.7	chr14:31453275:-	ZNF675^ENSG00000197372.10	chr19:23534298:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1196:25205:20925	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr19]""]"	chr14:31453275-chr19:23534298	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AL139353.1--LINC00621	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL139353.1^ENSG00000203546.7	chr14:31453275:-	LINC00621^ENSG00000262619.2	chr13:22859868:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1438:8216:16526	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr14--chr13]""]"	chr14:31453275-chr13:22859868	False			0	Read count too low: 1 < 8	FAIL	1
AL138778.1--AL136456.1	1	0	1.0	0.0	ONLY_REF_SPLICE	AL138778.1^ENSG00000286285.1	chr1:193457750:+	AL136456.1^ENSG00000227240.2	chr1:193673210:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1208:42065:25774	.	YES_LDAS	0.0034	GT	1.5656	AG	1.5628	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[8026]""]"	chr1:193457750-chr1:193673210	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AL121894.3--C9orf116	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AL121894.3^ENSG00000286117.2	chr20:23666906:+	C9orf116^ENSG00000160345.13	chr9:135498656:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2432:35285:17086	.	NO_LDAS	0.0017	GT	1.5301	AG	1.9329	"[""INTERCHROMOSOMAL[chr20--chr9]""]"	chr20:23666906-chr9:135498656	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL049828.1--AKR1C1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AL049828.1^ENSG00000258526.7	chr14:39470400:+	AKR1C1^ENSG00000187134.14	chr10:4967033:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:16112:9632	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8256	"[""INTERCHROMOSOMAL[chr14--chr10]""]"	chr14:39470400-chr10:4967033	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL049780.1--MLH3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL049780.1^ENSG00000258646.1	chr14:75004735:-	MLH3^ENSG00000119684.16	chr14:75049718:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1265:22924:8370	.	YES_LDAS	0.0034	GT	1.5628	AG	1.8892	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr14:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[5288]""]"	chr14:75004735-chr14:75049718	False			0	Read count too low: 1 < 8	FAIL	1
AL035446.2--TMA16	1	0	1.0	0.0	ONLY_REF_SPLICE	AL035446.2^ENSG00000285875.1	chr6:140898188:-	TMA16^ENSG00000198498.10	chr4:163507033:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1423:4689:19945	.	YES_LDAS	0.0034	GT	1.9086	AG	1.4295	"[""INTERCHROMOSOMAL[chr6--chr4]""]"	chr6:140898188-chr4:163507033	False			0	Read count too low: 1 < 8	FAIL	1
AL024497.2--TARID	1	0	1.0	0.0	ONLY_REF_SPLICE	AL024497.2^ENSG00000234567.1	chr6:133456534:-	TARID^ENSG00000227954.7	chr6:133538192:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:10376:12112	.	YES_LDAS	0.0034	GT	1.6729	AG	1.7232	"[""INTRACHROMOSOMAL[chr6:0.05Mb]"",""LOCAL_REARRANGEMENT:-:[45647]""]"	chr6:133456534-chr6:133538192	False			0	Read count too low: 1 < 8	FAIL	1
AL022324.1--AP000346.2	1	0	0.5	0.0	ONLY_REF_SPLICE	AL022324.1^ENSG00000230637.2	chr22:25327738:+	AP000346.2^ENSG00000234353.2	chr22:23638942:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2385:50592:5624	.	YES_LDAS	0.0017	GT	1.7465	AG	1.9086	"[""INTRACHROMOSOMAL[chr22:1.69Mb]""]"	chr22:25327738-chr22:23638942	False			0	Read count too low: 1 < 8	FAIL	1
AL021707.2--MRPS35	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL021707.2^ENSG00000228274.4	chr22:38674891:-	MRPS35^ENSG00000061794.13	chr12:27735447:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1253:43877:12014	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr22--chr12]""]"	chr22:38674891-chr12:27735447	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AL008725.1--PRELID2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AL008725.1^ENSG00000286100.1	chr20:44864458:-	PRELID2^ENSG00000186314.11	chr5:145796547:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1382:16436:22439	.	YES_LDAS	0.0034	GT	1.9899	AG	1.9656	"[""INTERCHROMOSOMAL[chr20--chr5]""]"	chr20:44864458-chr5:145796547	False			0	Read count too low: 1 < 8	FAIL	1
AKAP10--ALG14	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AKAP10^ENSG00000108599.15	chr17:19909234:-	ALG14^ENSG00000172339.10	chr1:95064872:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1240:38384:11944	.	NO_LDAS	0.0017	GT	1.7968	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:19909234-chr1:95064872	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AGTPBP1--INTS13	1	0	1.0	0.0	ONLY_REF_SPLICE	AGTPBP1^ENSG00000135049.16	chr9:85596362:-	INTS13^ENSG00000064102.15	chr12:26914578:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2160:22074:11159	.	YES_LDAS	0.0034	GT	1.6895	AG	1.4566	"[""INTERCHROMOSOMAL[chr9--chr12]""]"	chr9:85596362-chr12:26914578	False			0	Read count too low: 1 < 8	FAIL	1
AF121898.1--FAAH	1	0	1.0	0.0	ONLY_REF_SPLICE	AF121898.1^ENSG00000253500.6	chr8:87636601:-	FAAH^ENSG00000117480.16	chr1:46402091:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2477:20351:7249	.	NO_LDAS	0.0034	GT	1.8323	AG	1.7819	"[""INTERCHROMOSOMAL[chr8--chr1]""]"	chr8:87636601-chr1:46402091	False			0	Read count too low: 1 < 8	FAIL	1
AF064860.1--PCP4	1	0	1.0	0.0	ONLY_REF_SPLICE	AF064860.1^ENSG00000225330.1	chr21:39630490:+	PCP4^ENSG00000183036.11	chr21:39928984:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2466:48658:26657	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5329	"[""INTRACHROMOSOMAL[chr21:0.14Mb]""]"	chr21:39630490-chr21:39928984	False			0	Read count too low: 1 < 8	FAIL	1
AF064860.1--IGSF5	1	0	1.0	0.0	ONLY_REF_SPLICE	AF064860.1^ENSG00000225330.1	chr21:39630490:+	IGSF5^ENSG00000183067.5	chr21:39765535:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2187:20934:20393	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7056	"[""INTRACHROMOSOMAL[chr21:0.02Mb]"",""NEIGHBORS[19322]""]"	chr21:39630490-chr21:39765535	False			0	Read count too low: 1 < 8	FAIL	1
ADSS2--AC007906.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ADSS2^ENSG00000035687.10	chr1:244418838:-	AC007906.2^ENSG00000277639.2	chr16:53044186:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1294:36750:29431	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr1--chr16]""]"	chr1:244418838-chr16:53044186	False			0	Read count too low: 1 < 8	FAIL	1
ADO--AL356776.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ADO^ENSG00000181915.5	chr10:62805852:+	AL356776.2^ENSG00000286340.1	chr6:79078004:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2258:34112:16624	.	NO_LDAS	0.0017	GT	1.9086	AG	1.231	"[""INTERCHROMOSOMAL[chr10--chr6]""]"	chr10:62805852-chr6:79078004	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ADGRE2--MRPL37	1	0	1.0	0.0	ONLY_REF_SPLICE	ADGRE2^ENSG00000127507.18	chr19:14746232:-	MRPL37^ENSG00000116221.15	chr1:54205018:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2343:42947:7796	.	YES_LDAS	0.0034	GT	1.7819	AG	1.9329	"[""INTERCHROMOSOMAL[chr19--chr1]""]"	chr19:14746232-chr1:54205018	False			0	Read count too low: 1 < 8	FAIL	1
ADD3--PLEKHO2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ADD3^ENSG00000148700.15	chr10:110122212:+	PLEKHO2^ENSG00000241839.10	chr15:64848593:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2125:37494:2387	.	YES_LDAS	0.0034	GT	1.7232	AG	1.7968	"[""INTERCHROMOSOMAL[chr10--chr15]""]"	chr10:110122212-chr15:64848593	False			0	Read count too low: 1 < 8	FAIL	1
ACYP2--C4orf50	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACYP2^ENSG00000170634.13	chr2:54138752:+	C4orf50^ENSG00000181215.15	chr4:6018161:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2251:33684:14452	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr2--chr4]""]"	chr2:54138752-chr4:6018161	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ACYP1--MLH3	1	0	1.0	0.0	ONLY_REF_SPLICE	ACYP1^ENSG00000119640.9	chr14:75069210:-	MLH3^ENSG00000119684.16	chr14:75049718:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2271:1032:19244	.	YES_LDAS	0.0034	GT	1.5628	AG	1.8892	"[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[1705]""]"	chr14:75069210-chr14:75049718	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
ACVR1B--UHRF2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACVR1B^ENSG00000135503.13	chr12:51976575:+	UHRF2^ENSG00000147854.17	chr9:6460710:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1288:2092:6143	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6895	"[""INTERCHROMOSOMAL[chr12--chr9]""]"	chr12:51976575-chr9:6460710	False			0	Read count too low: 1 < 8	FAIL	1
ACTR8--SACM1L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACTR8^ENSG00000113812.14	chr3:53868674:-	SACM1L^ENSG00000211456.13	chr3:45703438:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1104:3136:1056	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTRACHROMOSOMAL[chr3:8.12Mb]""]"	chr3:53868674-chr3:45703438	False			0	Read count too low: 1 < 8	FAIL	1
ACTBP7--ACTG1P3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACTBP7^ENSG00000185607.5	chr15:43989463:-	ACTG1P3^ENSG00000215388.3	chr20:1161168:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1182:41086:19426	.	YES_LDAS	0.0034	GC	1.8892	AG	1.6729	"[""INTERCHROMOSOMAL[chr15--chr20]""]"	chr15:43989463-chr20:1161168	False			0	Read count too low: 1 < 8	FAIL	1
ACSL1--ZBTB34	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACSL1^ENSG00000151726.15	chr4:184773663:-	ZBTB34^ENSG00000177125.5	chr9:126881764:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1263:39258:8441	.	NO_LDAS	0.0034	GT	1.8892	AG	1.5219	"[""INTERCHROMOSOMAL[chr4--chr9]""]"	chr4:184773663-chr9:126881764	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ACP7--GEMIN7-AS1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACP7^ENSG00000183760.11	chr19:39084400:+	GEMIN7-AS1^ENSG00000267348.3	chr19:45091000:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1369:8071:4391	.	NO_LDAS	0.0034	GT	1.2729	AG	1.8892	"[""INTRACHROMOSOMAL[chr19:5.97Mb]""]"	chr19:39084400-chr19:45091000	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ACP6--TBC1D15	1	0	1.0	0.0	ONLY_REF_SPLICE	ACP6^ENSG00000162836.12	chr1:147648246:-	TBC1D15^ENSG00000121749.16	chr12:71880469:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2403:16776:29501	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTERCHROMOSOMAL[chr1--chr12]""]"	chr1:147648246-chr12:71880469	False			0	Read count too low: 1 < 8	FAIL	1
ACOT9--POLA1	1	0	1.0	0.0	ONLY_REF_SPLICE	ACOT9^ENSG00000123130.17	chrX:23721881:-	POLA1^ENSG00000101868.13	chrX:24699425:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2145:6347:12504	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chrX:0.93Mb]""]"	chrX:23721881-chrX:24699425	False			0	Read count too low: 1 < 8	FAIL	1
ACOT9--APOO	1	0	1.0	0.0	ONLY_REF_SPLICE	ACOT9^ENSG00000123130.17	chrX:23743125:-	APOO^ENSG00000184831.14	chrX:23880952:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2481:36677:4867	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9899	"[""Klijn_CellLines"",""DEEPEST2019"",""TumorFusionsNAR2018"",""ChimerSeq"",""TCGA_StarF2019"",""INTRACHROMOSOMAL[chrX:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[66878]""]"	chrX:23743125-chrX:23880952	False			0	Read count too low: 1 < 8	FAIL	1
ACOT9--AL354714.2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	ACOT9^ENSG00000123130.17	chrX:23743125:-	AL354714.2^ENSG00000213080.3	chr1:160895029:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:40649:14718	.	NO_LDAS	0.0017	GT	1.6895	AG	1.9656	"[""INTERCHROMOSOMAL[chrX--chr1]""]"	chrX:23743125-chr1:160895029	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ACER3--FCHSD2	1	0	1.0	0.0	ONLY_REF_SPLICE	ACER3^ENSG00000078124.13	chr11:76926667:+	FCHSD2^ENSG00000137478.15	chr11:72989097:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1106:45479:2878	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""DEEPEST2019"",""ChimerSeq"",""INTRACHROMOSOMAL[chr11:3.72Mb]""]"	chr11:76926667-chr11:72989097	False			0	Read count too low: 1 < 8	FAIL	1
ACER3--ALG8	1	0	1.0	0.0	ONLY_REF_SPLICE	ACER3^ENSG00000078124.13	chr11:76959031:+	ALG8^ENSG00000159063.14	chr11:78121174:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:38942:15293	.	YES_LDAS	0.0034	GT	1.6729	AG	1.9329	"[""INTRACHROMOSOMAL[chr11:1.07Mb]""]"	chr11:76959031-chr11:78121174	False			0	Read count too low: 1 < 8	FAIL	1
ACAT1--AC024451.4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	ACAT1^ENSG00000075239.14	chr11:108140215:+	AC024451.4^ENSG00000269924.1	chr8:47527638:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2440:33942:6717	.	NO_LDAS	0.0034	GT	1.8295	AG	1.9656	"[""INTERCHROMOSOMAL[chr11--chr8]""]"	chr11:108140215-chr8:47527638	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
ACADM--SSX2IP	1	0	1.0	0.0	ONLY_REF_SPLICE	ACADM^ENSG00000117054.15	chr1:75761370:+	SSX2IP^ENSG00000117155.17	chr1:84647607:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1173:12989:22046	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chr1:8.86Mb]""]"	chr1:75761370-chr1:84647607	False			0	Read count too low: 1 < 8	FAIL	1
ACADM--OSBPL3	1	0	1.0	0.0	ONLY_REF_SPLICE	ACADM^ENSG00000117054.15	chr1:75740110:+	OSBPL3^ENSG00000070882.13	chr7:24800279:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:49216:26530	.	NO_LDAS	0.0034	GT	1.7465	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:75740110-chr7:24800279	False			0	Read count too low: 1 < 8	FAIL	1
ACAD11--INSL6	1	0	1.0	0.0	ONLY_REF_SPLICE	ACAD11^ENSG00000240303.8	chr3:132618634:-	INSL6^ENSG00000120210.8	chr9:5133592:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1147:33384:22845	.	NO_LDAS	0.0034	GT	1.7819	AG	1.7056	"[""INTERCHROMOSOMAL[chr3--chr9]""]"	chr3:132618634-chr9:5133592	False			0	Read count too low: 1 < 8	FAIL	1
ACAD11--AL513493.1	1	0	0.5	0.0	ONLY_REF_SPLICE	ACAD11^ENSG00000240303.8	chr3:132618634:-	AL513493.1^ENSG00000285079.1	chr1:65710813:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2478:16646:4251	.	YES_LDAS	0.0017	GT	1.7819	AG	1.7056	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:132618634-chr1:65710813	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.2--NBPF11	1	0	0.08	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	NBPF11^ENSG00000263956.6	chr1:148143686:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1368:32252:27609	.	YES_LDAS	0.0003	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:1.46Mb]""]"	chr1:149607554-chr1:148143686	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.2--IMMP2L	1	0	0.2	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	IMMP2L^ENSG00000184903.10	chr7:111561923:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1222:14494:29053	.	NO_LDAS	0.0007	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr7]""]"	chr1:149607554-chr7:111561923	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.2--AC073046.1	1	0	0.17	0.0	ONLY_REF_SPLICE	AC242842.2^ENSG00000284964.1	chr1:149607554:+	AC073046.1^ENSG00000235499.1	chr2:73985980:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2461:45398:4755	.	YES_LDAS	0.0006	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr1--chr2]""]"	chr1:149607554-chr2:73985980	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.1--MAP3K1	1	0	0.2	0.0	ONLY_REF_SPLICE	AC242842.1^ENSG00000275557.1	chr1:149608516:+	MAP3K1^ENSG00000095015.6	chr5:56856600:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1192:13774:22733	.	YES_LDAS	0.0007	GT	1.7819	AG	1.7819	"[""INTERCHROMOSOMAL[chr1--chr5]""]"	chr1:149608516-chr5:56856600	False			0	Read count too low: 1 < 8	FAIL	1
AC242842.1--LINC00623	1	0	1.0	0.0	ONLY_REF_SPLICE	AC242842.1^ENSG00000275557.1	chr1:149608516:+	LINC00623^ENSG00000226067.7	chr1:120952439:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1127:25877:22537	.	YES_LDAS	0.0034	GT	1.7819	AG	1.5628	"[""INTRACHROMOSOMAL[chr1:28.60Mb]""]"	chr1:149608516-chr1:120952439	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC140076.1--AC005094.1	1	0	0.33	0.0	INCL_NON_REF_SPLICE	AC140076.1^ENSG00000227309.1	chr3:17465389:+	AC005094.1^ENSG00000229949.1	chr7:21401030:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2120:51797:20743	.	NO_LDAS	0.0011	GT	1.8256	AG	1.9656	"[""INTERCHROMOSOMAL[chr3--chr7]""]"	chr3:17465389-chr7:21401030	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC138866.1--PGBD2	1	0	0.2	0.0	ONLY_REF_SPLICE	AC138866.1^ENSG00000254701.3	chr5:70197255:-	PGBD2^ENSG00000185220.12	chr1:248917279:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1342:15473:25143	.	YES_LDAS	0.0007	GT	1.9329	AG	1.8295	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:70197255-chr1:248917279	False			0	Read count too low: 1 < 8	FAIL	1
AC138393.1--AC015802.6	1	0	0.33	0.0	INCL_NON_REF_SPLICE	AC138393.1^ENSG00000229930.1	chr1:224030704:-	AC015802.6^ENSG00000284526.1	chr17:76564707:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1160:32300:8469	.	NO_LDAS	0.0011	GT	1.7819	AG	1.7056	"[""INTERCHROMOSOMAL[chr1--chr17]""]"	chr1:224030704-chr17:76564707	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC138207.8--RNF135	1	0	1.0	0.0	ONLY_REF_SPLICE	AC138207.8^ENSG00000266865.6	chr17:31024426:+	RNF135^ENSG00000181481.14	chr17:30984617:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2340:38546:25844	.	YES_LDAS	0.0034	GT	1.8323	AG	1.6895	"[""INTRACHROMOSOMAL[chr17:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8586]""]"	chr17:31024426-chr17:30984617	False			0	Read count too low: 1 < 8	FAIL	1
AC138207.2--BEX2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC138207.2^ENSG00000264107.1	chr17:31095204:-	BEX2^ENSG00000133134.12	chrX:103309734:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1102:14915:27287	.	YES_LDAS	0.0034	GT	1.2729	AG	1.4295	"[""INTERCHROMOSOMAL[chr17--chrX]""]"	chr17:31095204-chrX:103309734	False			0	Read count too low: 1 < 8	FAIL	1
AC137723.1--YRDC	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC137723.1^ENSG00000279372.1	chr17:82035724:-	YRDC^ENSG00000196449.4	chr1:37804441:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1498:43481:6086	.	NO_LDAS	0.0034	GT	1.9086	AG	1.9329	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:82035724-chr1:37804441	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC134878.2--PSMD14	1	0	0.33	0.0	ONLY_REF_SPLICE	AC134878.2^ENSG00000278212.2	chrY:11212744:-	PSMD14^ENSG00000115233.12	chr2:161367478:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1177:21152:12616	.	YES_LDAS	0.0011	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chrY--chr2]""]"	chrY:11212744-chr2:161367478	False			0	Read count too low: 1 < 8	FAIL	1
AC134407.3--ZNF800	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC134407.3^ENSG00000279880.1	chr17:67975958:+	ZNF800^ENSG00000048405.10	chr7:127373479:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1120:32891:21206	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8062	"[""INTERCHROMOSOMAL[chr17--chr7]""]"	chr17:67975958-chr7:127373479	False			0	Read count too low: 1 < 8	FAIL	1
AC120057.3--NBPF19	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC120057.3^ENSG00000279641.1	chr17:7243696:+	NBPF19^ENSG00000271383.7	chr1:149501602:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2135:44710:24975	.	YES_LDAS	0.0034	GT	1.231	AG	0.971	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:7243696-chr1:149501602	False			0	Read count too low: 1 < 8	FAIL	1
AC117481.1--AL391058.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC117481.1^ENSG00000287398.1	chr3:75214555:+	AL391058.1^ENSG00000232499.2	chr1:113450190:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1315:46692:14872	.	YES_LDAS	0.0017	GT	1.9086	AG	1.5301	"[""INTERCHROMOSOMAL[chr3--chr1]""]"	chr3:75214555-chr1:113450190	False			0	Read count too low: 1 < 8	FAIL	1
AC115284.4--IQCF1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC115284.4^ENSG00000287707.1	chr3:51929275:-	IQCF1^ENSG00000173389.16	chr3:51903089:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:21864:5358	.	YES_LDAS	0.0034	GT	1.9219	AG	1.5656	"[""INTRACHROMOSOMAL[chr3:0.02Mb]"",""NEIGHBORS[23718]""]"	chr3:51929275-chr3:51903089	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC114781.2--COQ2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC114781.2^ENSG00000250057.1	chr4:83238522:-	COQ2^ENSG00000173085.15	chr4:83279114:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1333:37122:16904	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9329	"[""INTRACHROMOSOMAL[chr4:0.01Mb]"",""LOCAL_REARRANGEMENT:-:[14323]""]"	chr4:83238522-chr4:83279114	False			0	Read count too low: 1 < 8	FAIL	1
AC114489.1--SYNC	1	0	1.0	0.0	ONLY_REF_SPLICE	AC114489.1^ENSG00000224409.1	chr1:32725078:-	SYNC^ENSG00000162520.15	chr1:32696044:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2445:45932:26334	.	YES_LDAS	0.0034	GT	1.7819	AG	1.4716	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""NEIGHBORS[14138]""]"	chr1:32725078-chr1:32696044	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC105052.5--AC004980.4	1	0	0.03	0.0	INCL_NON_REF_SPLICE	AC105052.5^ENSG00000286830.1	chr7:102703315:-	AC004980.4^ENSG00000250778.1	chr7:76521938:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2362:1744:7754	.	NO_LDAS	0.0001	GT	1.8295	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:26.18Mb]""]"	chr7:102703315-chr7:76521938	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC104462.1--SMYD3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC104462.1^ENSG00000231612.1	chr1:245673692:-	SMYD3^ENSG00000185420.19	chr1:245749664:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2456:15797:14802	.	YES_LDAS	0.0034	GT	1.7819	AG	1.6729	"[""INTRACHROMOSOMAL[chr1:0.07Mb]"",""LOCAL_REARRANGEMENT:-:[72864]""]"	chr1:245673692-chr1:245749664	False			0	Read count too low: 1 < 8	FAIL	1
AC104383.1--GALNT18	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC104383.1^ENSG00000286959.1	chr11:11810773:-	GALNT18^ENSG00000110328.6	chr11:11448936:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2442:12067:25550	.	YES_LDAS	0.0034	GC	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr11:0.16Mb]""]"	chr11:11810773-chr11:11448936	False			0	Read count too low: 1 < 8	FAIL	1
AC104117.3--ZNF454	1	0	1.0	0.0	ONLY_REF_SPLICE	AC104117.3^ENSG00000254035.1	chr5:178969693:+	ZNF454^ENSG00000178187.8	chr5:178942685:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1455:8564:9533	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8892	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2957]""]"	chr5:178969693-chr5:178942685	False			0	Read count too low: 1 < 8	FAIL	1
AC104078.1--KIF17	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC104078.1^ENSG00000247193.3	chr4:36248606:+	KIF17^ENSG00000117245.13	chr1:20717598:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1205:23393:7446	.	NO_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTERCHROMOSOMAL[chr4--chr1]""]"	chr4:36248606-chr1:20717598	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC099489.1--KCNAB2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC099489.1^ENSG00000188897.9	chr16:11467152:-	KCNAB2^ENSG00000069424.15	chr1:6085204:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1263:41822:18067	.	NO_LDAS	0.0034	GT	1.9329	AG	1.8892	"[""INTERCHROMOSOMAL[chr16--chr1]""]"	chr16:11467152-chr1:6085204	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC097533.1--AC025569.1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC097533.1^ENSG00000237868.1	chr4:122078217:-	AC025569.1^ENSG00000258168.6	chr12:70538867:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1447:27940:25045	.	NO_LDAS	0.0017	GT	1.6895	AG	1.5546	"[""INTERCHROMOSOMAL[chr4--chr12]""]"	chr4:122078217-chr12:70538867	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC097493.3--LINC00882	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC097493.3^ENSG00000284648.1	chr4:9532651:+	LINC00882^ENSG00000242759.8	chr3:106926285:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1444:25165:1799	.	YES_LDAS	0.0034	GT	1.7056	AG	1.7056	"[""INTERCHROMOSOMAL[chr4--chr3]""]"	chr4:9532651-chr3:106926285	False			0	Read count too low: 1 < 8	FAIL	1
AC093763.2--MAP3K7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC093763.2^ENSG00000251643.1	chr4:187442867:-	MAP3K7^ENSG00000135341.18	chr6:90536401:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1159:50899:13275	.	NO_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTERCHROMOSOMAL[chr4--chr6]""]"	chr4:187442867-chr6:90536401	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC092902.2--AC134684.3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC092902.2^ENSG00000272840.1	chr3:125797887:+	AC134684.3^ENSG00000284617.1	chr8:7610991:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1342:28579:19819	.	YES_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr3--chr8]""]"	chr3:125797887-chr8:7610991	False			0	Read count too low: 1 < 8	FAIL	1
AC092813.1--MSH4	1	0	1.0	0.0	ONLY_REF_SPLICE	AC092813.1^ENSG00000225605.3	chr1:75934486:+	MSH4^ENSG00000057468.7	chr1:75803731:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1244:25205:13527	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8892	"[""INTRACHROMOSOMAL[chr1:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[13212]""]"	chr1:75934486-chr1:75803731	False			0	Read count too low: 1 < 8	FAIL	1
AC092567.1--ANKRD23	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC092567.1^ENSG00000226605.1	chr2:62825932:-	ANKRD23^ENSG00000163126.15	chr2:96839406:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1125:11582:25241	.	NO_LDAS	0.0034	GT	1.4716	AG	1.7819	"[""INTRACHROMOSOMAL[chr2:33.97Mb]""]"	chr2:62825932-chr2:96839406	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC092279.1--SMIM20	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC092279.1^ENSG00000268362.6	chr19:24050742:+	SMIM20^ENSG00000250317.8	chr4:25914293:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1249:3848:1336	.	YES_LDAS	0.0034	GT	1.7819	AG	1.5628	"[""INTERCHROMOSOMAL[chr19--chr4]""]"	chr19:24050742-chr4:25914293	False			0	Read count too low: 1 < 8	FAIL	1
AC092032.2--RBAK	1	0	0.25	0.0	ONLY_REF_SPLICE	AC092032.2^ENSG00000288620.1	chr7:4985075:+	RBAK^ENSG00000146587.18	chr7:5048033:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:45730:6423	.	YES_LDAS	0.0008	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:0.06Mb]"",""NEIGHBORS[56644]""]"	chr7:4985075-chr7:5048033	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC092032.2--PMS2CL	1	0	0.25	0.0	ONLY_REF_SPLICE	AC092032.2^ENSG00000288620.1	chr7:4985075:+	PMS2CL^ENSG00000187953.10	chr7:6731897:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:45730:6423	.	YES_LDAS	0.0008	GT	1.7819	AG	1.8892	"[""INTRACHROMOSOMAL[chr7:1.72Mb]""]"	chr7:4985075-chr7:6731897	False			0	Read count too low: 1 < 8	FAIL	1
AC091212.1--METTL23	1	0	1.0	0.0	ONLY_REF_SPLICE	AC091212.1^ENSG00000239462.1	chr3:98904994:+	METTL23^ENSG00000181038.14	chr17:76732978:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1387:2489:4671	.	YES_LDAS	0.0034	GT	1.9656	AG	1.7465	"[""INTERCHROMOSOMAL[chr3--chr17]""]"	chr3:98904994-chr17:76732978	False			0	Read count too low: 1 < 8	FAIL	1
AC091117.2--C1orf112	1	0	1.0	0.0	ONLY_REF_SPLICE	AC091117.2^ENSG00000259418.1	chr15:45042367:-	C1orf112^ENSG00000000460.17	chr1:169827051:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1327:15077:5680	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9329	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:45042367-chr1:169827051	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC091057.6--ARHGAP11B	1	0	1.0	0.0	ONLY_REF_SPLICE	AC091057.6^ENSG00000285035.1	chr15:30647714:+	ARHGAP11B^ENSG00000285077.2	chr15:30630703:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2241:9325:16568	.	YES_LDAS	0.0034	GT	1.9656	AG	1.5656	"[""INTRACHROMOSOMAL[chr15:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[9246]""]"	chr15:30647714-chr15:30630703	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC091057.4--MIGA1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	MIGA1^ENSG00000180488.15	chr1:77801331:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1120:18903:27497	.	YES_LDAS	0.0017	GT	1.8892	AG	1.8062	"[""INTERCHROMOSOMAL[chr15--chr1]""]"	chr15:30750556-chr1:77801331	False			0	Read count too low: 1 < 8	FAIL	1
AC091057.4--ARHGAP11B	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	ARHGAP11B^ENSG00000285077.2	chr15:30634409:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1111:45196:9842	.	NO_LDAS	0.0017	GT	1.8892	AG	1.8295	"[""INTRACHROMOSOMAL[chr15:0.12Mb]""]"	chr15:30750556-chr15:30634409	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC091057.4--ARHGAP11B	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC091057.4^ENSG00000284783.1	chr15:30750556:+	ARHGAP11B^ENSG00000285077.2	chr15:30633490:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1123:33336:16568	.	YES_LDAS	0.0017	GT	1.8892	AG	1.7465	"[""INTRACHROMOSOMAL[chr15:0.12Mb]""]"	chr15:30750556-chr15:30633490	False			0	Read count too low: 1 < 8	FAIL	1
AC087359.1--ATG2B	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC087359.1^ENSG00000250869.2	chr8:67133745:-	ATG2B^ENSG00000066739.12	chr14:96309590:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2131:18256:2443	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTERCHROMOSOMAL[chr8--chr14]""]"	chr8:67133745-chr14:96309590	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC087280.2--MRPL17	1	0	1.0	0.0	ONLY_REF_SPLICE	AC087280.2^ENSG00000283415.2	chr11:6924498:-	MRPL17^ENSG00000158042.9	chr11:6682815:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1116:23692:9309	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9899	"[""TCGA_StarF2019"",""INTRACHROMOSOMAL[chr11:0.14Mb]""]"	chr11:6924498-chr11:6682815	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC083899.1--AC097527.1	1	0	0.25	0.0	ONLY_REF_SPLICE	AC083899.1^ENSG00000204745.4	chr2:87132117:+	AC097527.1^ENSG00000237666.2	chr2:106475817:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2111:22301:12840	.	YES_LDAS	0.0008	GT	1.8892	AG	1.8892	"[""INTRACHROMOSOMAL[chr2:19.27Mb]""]"	chr2:87132117-chr2:106475817	False			0	Read count too low: 1 < 8	FAIL	1
AC083899.1--AC097527.1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC083899.1^ENSG00000204745.4	chr2:87164658:+	AC097527.1^ENSG00000237666.2	chr2:106470935:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1329:1356:7390	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5219	"[""INTRACHROMOSOMAL[chr2:19.27Mb]""]"	chr2:87164658-chr2:106470935	False			0	Read count too low: 1 < 8	FAIL	1
AC079841.2--POLQ	1	0	1.0	0.0	ONLY_REF_SPLICE	AC079841.2^ENSG00000287022.1	chr3:121430389:-	POLQ^ENSG00000051341.14	chr3:121449426:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2467:41685:3620	.	YES_LDAS	0.0034	GT	1.2419	AG	1.8892	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]"	chr3:121430389-chr3:121449426	False			0	Read count too low: 1 < 8	FAIL	1
AC079841.2--POLQ	1	0	1.0	0.0	ONLY_REF_SPLICE	AC079841.2^ENSG00000287022.1	chr3:121430389:-	POLQ^ENSG00000051341.14	chr3:121436275:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2354:37607:14101	.	YES_LDAS	0.0034	GT	1.2419	AG	1.9656	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]"	chr3:121430389-chr3:121436275	False			0	Read count too low: 1 < 8	FAIL	1
AC079841.2--POLQ	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC079841.2^ENSG00000287022.1	chr3:121430389:-	POLQ^ENSG00000051341.14	chr3:121487509:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:37664:6409	.	YES_LDAS	0.0034	GT	1.2419	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]"	chr3:121430389-chr3:121487509	False			0	Read count too low: 1 < 8	FAIL	1
AC079841.2--POLQ	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC079841.2^ENSG00000287022.1	chr3:121430389:-	POLQ^ENSG00000051341.14	chr3:121433036:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1262:22002:1392	.	YES_LDAS	0.0034	GT	1.2419	AG	1.9329	"[""INTRACHROMOSOMAL[chr3:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[229]""]"	chr3:121430389-chr3:121433036	False			0	Read count too low: 1 < 8	FAIL	1
AC079142.1--VCX	1	0	0.33	0.0	ONLY_REF_SPLICE	AC079142.1^ENSG00000285679.2	chrX:8228405:+	VCX^ENSG00000182583.12	chrX:7843498:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:30520:10318	.	YES_LDAS	0.0011	GT	1.7465	AG	1.9329	"[""INTRACHROMOSOMAL[chrX:0.08Mb]"",""LOCAL_REARRANGEMENT:+:[84300]""]"	chrX:8228405-chrX:7843498	False			0	Read count too low: 1 < 8	FAIL	1
AC078993.1--TFCP2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC078993.1^ENSG00000238178.7	chrX:16167597:-	TFCP2^ENSG00000135457.10	chr12:51109222:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1463:47105:5498	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chrX--chr12]""]"	chrX:16167597-chr12:51109222	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC073655.2--CEP83	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC073655.2^ENSG00000258365.1	chr12:94278008:-	CEP83^ENSG00000173588.15	chr12:94400981:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1465:38157:1350	.	YES_LDAS	0.0034	GT	1.9329	AG	1.5058	"[""INTRACHROMOSOMAL[chr12:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[23605]""]"	chr12:94278008-chr12:94400981	False			0	Read count too low: 1 < 8	FAIL	1
AC073488.1--ADGRF3	1	0	0.17	0.0	INCL_NON_REF_SPLICE	AC073488.1^ENSG00000232111.2	chrX:9404753:+	ADGRF3^ENSG00000173567.15	chr2:26313625:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2341:31079:18543	.	NO_LDAS	0.0006	GT	1.8892	AG	1.8295	"[""INTERCHROMOSOMAL[chrX--chr2]""]"	chrX:9404753-chr2:26313625	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC073316.1--CARD11	1	0	1.0	0.0	ONLY_REF_SPLICE	AC073316.1^ENSG00000217455.8	chr7:3158138:-	CARD11^ENSG00000198286.10	chr7:2958631:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1224:28102:19552	.	YES_LDAS	0.0034	GT	1.8256	AG	1.8323	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr7:0.10Mb]"",""NEIGHBORS[96367]""]"	chr7:3158138-chr7:2958631	False			0	Read count too low: 1 < 8	FAIL	1
AC068989.1--DDX60	1	0	1.0	0.0	ONLY_REF_SPLICE	AC068989.1^ENSG00000287188.1	chr4:168194397:-	DDX60^ENSG00000137628.18	chr4:168237795:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1330:5765:1182	.	NO_LDAS	0.0034	GT	1.7056	AG	1.9656	"[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]"	chr4:168194397-chr4:168237795	False			0	Read count too low: 1 < 8	FAIL	1
AC068989.1--DDX60	1	0	1.0	0.0	ONLY_REF_SPLICE	AC068989.1^ENSG00000287188.1	chr4:168194397:-	DDX60^ENSG00000137628.18	chr4:168225676:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2368:17398:4041	.	YES_LDAS	0.0034	GT	1.7056	AG	1.7968	"[""INTRACHROMOSOMAL[chr4:0.02Mb]"",""LOCAL_REARRANGEMENT:-:[21430]""]"	chr4:168194397-chr4:168225676	False			0	Read count too low: 1 < 8	FAIL	1
AC068633.1--LSAMP	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC068633.1^ENSG00000243276.6	chr3:118077358:-	LSAMP^ENSG00000185565.12	chr3:116485068:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2175:48949:24891	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8323	"[""INTRACHROMOSOMAL[chr3:0.87Mb]""]"	chr3:118077358-chr3:116485068	False			0	Read count too low: 1 < 8	FAIL	1
AC068587.4--FAM86B1	1	0	0.11	0.0	ONLY_REF_SPLICE	AC068587.4^ENSG00000283674.3	chr8:12601158:-	FAM86B1^ENSG00000186523.14	chr8:12189888:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1154:44662:11691	.	YES_LDAS	0.0004	GT	1.3996	AG	1.9899	"[""INTRACHROMOSOMAL[chr8:0.29Mb]""]"	chr8:12601158-chr8:12189888	False			0	Read count too low: 1 < 8	FAIL	1
AC068189.1--CBWD6	1	0	0.5	0.0	ONLY_REF_SPLICE	AC068189.1^ENSG00000254248.1	chr8:95078521:-	CBWD6^ENSG00000215126.10	chr9:41156439:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1450:35051:22985	.	NO_LDAS	0.0017	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr8--chr9]""]"	chr8:95078521-chr9:41156439	False			0	Read count too low: 1 < 8	FAIL	1
AC053527.2--ALB	1	0	1.0	0.0	ONLY_REF_SPLICE	AC053527.2^ENSG00000250220.1	chr4:73259408:+	ALB^ENSG00000163631.17	chr4:73404369:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2143:42672:4713	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9086	"[""INTRACHROMOSOMAL[chr4:0.08Mb]"",""NEIGHBORS[79161]""]"	chr4:73259408-chr4:73404369	False			0	Read count too low: 1 < 8	FAIL	1
AC027176.1--TSPAN9	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC027176.1^ENSG00000259273.1	chr15:89936539:+	TSPAN9^ENSG00000011105.14	chr12:3083653:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1385:15077:3186	.	NO_LDAS	0.0017	GT	1.2867	AG	1.9656	"[""INTERCHROMOSOMAL[chr15--chr12]""]"	chr15:89936539-chr12:3083653	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC026150.2--GOLGA8H	1	0	0.1	0.0	INCL_NON_REF_SPLICE	AC026150.2^ENSG00000260784.1	chr15:30517819:+	GOLGA8H^ENSG00000261794.1	chr15:30612597:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2107:44492:7614	.	NO_LDAS	0.0003	GT	1.7056	AG	1.9329	"[""INTRACHROMOSOMAL[chr15:0.09Mb]"",""NEIGHBORS[86259]""]"	chr15:30517819-chr15:30612597	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC025437.1--PIAS3	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC025437.1^ENSG00000253134.1	chr5:158278743:+	PIAS3^ENSG00000131788.16	chr1:145853886:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2489:15069:27777	.	NO_LDAS	0.0034	GT	1.9219	AG	1.7465	"[""INTERCHROMOSOMAL[chr5--chr1]""]"	chr5:158278743-chr1:145853886	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC025178.1--GOLPH3	1	0	1.0	0.0	ONLY_REF_SPLICE	AC025178.1^ENSG00000250764.1	chr5:32121495:-	GOLPH3^ENSG00000113384.14	chr5:32143880:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1265:26791:8539	.	NO_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2775]""]"	chr5:32121495-chr5:32143880	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC025178.1--GOLPH3	1	0	1.0	0.0	ONLY_REF_SPLICE	AC025178.1^ENSG00000250764.1	chr5:32121495:-	GOLPH3^ENSG00000113384.14	chr5:32135686:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1252:24154:2401	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[2775]""]"	chr5:32121495-chr5:32135686	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	1
AC022400.4--TIMM23	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC022400.4^ENSG00000272140.2	chr10:73713266:-	TIMM23^ENSG00000265354.4	chr10:45975454:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1284:36321:22131	.	YES_LDAS	0.0034	GT	1.9329	AG	1.9656	"[""INTRACHROMOSOMAL[chr10:27.70Mb]""]"	chr10:73713266-chr10:45975454	True		aih_curated_blacklist score(3)	0	aih_curated_blacklist score(3)	FAIL	1
AC022167.1--PMM2	1	0	0.5	0.0	ONLY_REF_SPLICE	AC022167.1^ENSG00000259939.1	chr16:8853636:+	PMM2^ENSG00000140650.12	chr16:8847724:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1184:14268:14564	.	YES_LDAS	0.0017	GT	1.9656	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3987]""]"	chr16:8853636-chr16:8847724	False			0	Read count too low: 1 < 8	FAIL	1
AC021851.1--NUP35	1	0	1.0	0.0	ONLY_REF_SPLICE	AC021851.1^ENSG00000272800.3	chr2:183188763:+	NUP35^ENSG00000163002.13	chr2:183157444:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2345:11913:12056	.	YES_LDAS	0.0034	GT	0.9056	AG	1.9086	"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]"	chr2:183188763-chr2:183157444	False			0	Read count too low: 1 < 8	FAIL	1
AC021851.1--NUP35	1	0	1.0	0.0	ONLY_REF_SPLICE	AC021851.1^ENSG00000272800.3	chr2:183188763:+	NUP35^ENSG00000163002.13	chr2:183151508:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1125:31782:23826	.	YES_LDAS	0.0034	GT	0.9056	AG	1.8256	"[""INTRACHROMOSOMAL[chr2:0.02Mb]"",""LOCAL_REARRANGEMENT:+:[17126]""]"	chr2:183188763-chr2:183151508	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC021087.3--SECISBP2L	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC021087.3^ENSG00000260774.1	chr5:215185:-	SECISBP2L^ENSG00000138593.9	chr15:48999973:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1224:1922:19945	.	NO_LDAS	0.0034	GT	1.7819	AG	1.8295	"[""INTERCHROMOSOMAL[chr5--chr15]""]"	chr5:215185-chr15:48999973	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC016907.2--ALK	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016907.2^ENSG00000233862.7	chr2:30119768:-	ALK^ENSG00000171094.18	chr2:29717697:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2454:6137:2920	.	YES_LDAS	0.0034	GT	1.8062	AG	1.9329	"[""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr2:0.13Mb]""]"	chr2:30119768-chr2:29717697	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC016831.1--SLC35F3	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016831.1^ENSG00000226380.9	chr7:130912110:-	SLC35F3^ENSG00000183780.13	chr1:234231417:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2442:41863:16371	.	YES_LDAS	0.0034	GT	1.8892	AG	1.4295	"[""INTERCHROMOSOMAL[chr7--chr1]""]"	chr7:130912110-chr1:234231417	False			0	Read count too low: 1 < 8	FAIL	1
AC016831.1--SEM1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016831.1^ENSG00000226380.9	chr7:130912110:-	SEM1^ENSG00000127922.9	chr7:96673859:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2126:1178:11089	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr7:34.17Mb]""]"	chr7:130912110-chr7:96673859	False			0	Read count too low: 1 < 8	FAIL	1
AC016831.1--EXOC4	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016831.1^ENSG00000226380.9	chr7:130912110:-	EXOC4^ENSG00000131558.15	chr7:133817325:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2404:19664:24415	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chr7:2.34Mb]""]"	chr7:130912110-chr7:133817325	False			0	Read count too low: 1 < 8	FAIL	1
AC016821.1--TSPAN15	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016821.1^ENSG00000287306.1	chr10:69511870:+	TSPAN15^ENSG00000099282.10	chr10:69483691:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1154:25003:13961	.	YES_LDAS	0.0034	GT	1.8323	AG	1.8062	"[""INTRACHROMOSOMAL[chr10:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[2500]""]"	chr10:69511870-chr10:69483691	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC016597.1--NPIPB10P	1	0	0.06	0.0	ONLY_REF_SPLICE	AC016597.1^ENSG00000261329.6	chr16:27685266:-	NPIPB10P^ENSG00000196796.5	chr16:29050502:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1308:25521:10963	.	NO_LDAS	0.0002	GT	1.9329	AG	1.8892	"[""INTRACHROMOSOMAL[chr16:1.32Mb]""]"	chr16:27685266-chr16:29050502	False			0	Read count too low: 1 < 8	FAIL	1
AC016526.2--ESRRB	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016526.2^ENSG00000258454.1	chr14:76252108:+	ESRRB^ENSG00000119715.15	chr14:76439341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2206:23968:29291	.	YES_LDAS	0.0034	GT	1.5058	AG	1.9656	"[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[47238]""]"	chr14:76252108-chr14:76439341	False			0	Read count too low: 1 < 8	FAIL	1
AC016526.2--ESRRB	1	0	1.0	0.0	ONLY_REF_SPLICE	AC016526.2^ENSG00000258454.1	chr14:76236003:+	ESRRB^ENSG00000119715.15	chr14:76439341:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1338:51668:15923	.	YES_LDAS	0.0034	GT	1.6895	AG	1.9656	"[""INTRACHROMOSOMAL[chr14:0.05Mb]"",""NEIGHBORS[47238]""]"	chr14:76236003-chr14:76439341	False			0	Read count too low: 1 < 8	FAIL	1
AC012615.1--SCAMP4	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC012615.1^ENSG00000261526.2	chr19:1875954:-	SCAMP4^ENSG00000227500.10	chr19:1917694:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2270:9001:11383	.	YES_LDAS	0.0034	GT	1.7465	AG	1.5546	"[""INTRACHROMOSOMAL[chr19:0.03Mb]"",""LOCAL_INVERSION:-:+:[29203]""]"	chr19:1875954-chr19:1917694	False			0	Read count too low: 1 < 8	FAIL	1
AC011632.1--ELAPOR2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC011632.1^ENSG00000253706.5	chr8:74866865:-	ELAPOR2^ENSG00000164659.15	chr7:86947922:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1237:43812:9547	.	YES_LDAS	0.0034	GT	1.7465	AG	1.3996	"[""INTERCHROMOSOMAL[chr8--chr7]""]"	chr8:74866865-chr7:86947922	False			0	Read count too low: 1 < 8	FAIL	1
AC010538.1--SPATA33	1	0	1.0	0.0	ONLY_REF_SPLICE	AC010538.1^ENSG00000275734.2	chr16:89682496:+	SPATA33^ENSG00000167523.14	chr16:89669286:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2431:4729:17549	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTRACHROMOSOMAL[chr16:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[296]""]"	chr16:89682496-chr16:89669286	False			0	Read count too low: 1 < 8	FAIL	1
AC010401.1--CDIN1	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC010401.1^ENSG00000262732.1	chr16:13934190:-	CDIN1^ENSG00000186073.14	chr15:36579948:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2211:7585:11537	.	NO_LDAS	0.0034	GT	1.053	AG	1.9656	"[""INTERCHROMOSOMAL[chr16--chr15]""]"	chr16:13934190-chr15:36579948	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC010335.1--NIP7	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC010335.1^ENSG00000268199.2	chr19:18443446:+	NIP7^ENSG00000132603.15	chr16:69341576:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1406:12706:6759	.	NO_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTERCHROMOSOMAL[chr19--chr16]""]"	chr19:18443446-chr16:69341576	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC010327.4--GTF2H2C	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC010327.4^ENSG00000267577.1	chr19:55160003:+	GTF2H2C^ENSG00000183474.16	chr5:69566612:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1411:3014:5862	.	NO_LDAS	0.0034	GT	1.8892	AG	1.9086	"[""INTERCHROMOSOMAL[chr19--chr5]""]"	chr19:55160003-chr5:69566612	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC010255.2--SNCAIP	1	0	1.0	0.0	ONLY_REF_SPLICE	AC010255.2^ENSG00000250803.6	chr5:122129683:+	SNCAIP^ENSG00000064692.20	chr5:122391089:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1113:33514:14158	.	YES_LDAS	0.0034	GT	1.3753	AG	1.4295	"[""INTRACHROMOSOMAL[chr5:0.13Mb]""]"	chr5:122129683-chr5:122391089	False			0	Read count too low: 1 < 8	FAIL	1
AC010198.2--YIPF5	1	0	1.0	0.0	ONLY_REF_SPLICE	AC010198.2^ENSG00000285517.1	chr12:30800021:+	YIPF5^ENSG00000145817.17	chr5:144165604:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1277:4527:15601	.	YES_LDAS	0.0034	GT	1.9219	AG	1.9899	"[""INTERCHROMOSOMAL[chr12--chr5]""]"	chr12:30800021-chr5:144165604	False			0	Read count too low: 1 < 8	FAIL	1
AC009292.2--PIAS1	1	0	1.0	0.0	ONLY_REF_SPLICE	AC009292.2^ENSG00000259410.5	chr15:67873866:+	PIAS1^ENSG00000033800.14	chr15:68086306:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1271:16144:21430	.	YES_LDAS	0.0034	GT	1.9656	AG	1.9329	"[""INTRACHROMOSOMAL[chr15:0.18Mb]""]"	chr15:67873866-chr15:68086306	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC009093.8--AC009093.9	1	0	0.33	0.0	ONLY_REF_SPLICE	AC009093.8^ENSG00000284649.1	chr16:29116326:+	AC009093.9^ENSG00000284671.1	chr16:29084443:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2346:33781:14200	.	YES_LDAS	0.0011	GT	1.8892	AG	1.9656	"[""INTRACHROMOSOMAL[chr16:0.01Mb]"",""LOCAL_REARRANGEMENT:+:[8888]""]"	chr16:29116326-chr16:29084443	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	1
AC008770.3--SEMA7A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC008770.3^ENSG00000267274.1	chr19:11953408:+	SEMA7A^ENSG00000138623.10	chr15:74410764:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2137:32292:24737	.	YES_LDAS	0.0034	AT	1.9656	AC	1.9086	"[""INTERCHROMOSOMAL[chr19--chr15]""]"	chr19:11953408-chr15:74410764	False			0	Read count too low: 1 < 8	FAIL	1
AC008764.7--VRK2	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC008764.7^ENSG00000269578.1	chr19:16586981:-	VRK2^ENSG00000028116.18	chr2:58159349:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2103:4050:14017	.	NO_LDAS	0.0017	GT	1.7819	AG	1.3996	"[""INTERCHROMOSOMAL[chr19--chr2]""]"	chr19:16586981-chr2:58159349	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
AC008667.2--PSD2	1	0	1.0	0.0	ONLY_REF_SPLICE	AC008667.2^ENSG00000250692.1	chr5:139855786:+	PSD2^ENSG00000146005.4	chr5:139833702:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1125:29202:20785	.	YES_LDAS	0.0034	GT	1.9329	AG	1.7232	"[""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:+:[3824]""]"	chr5:139855786-chr5:139833702	False			0	Read count too low: 1 < 8	FAIL	1
AC008267.2--AC008267.5	1	0	1.0	0.0	ONLY_REF_SPLICE	AC008267.2^ENSG00000230189.7	chr7:66450071:-	AC008267.5^ENSG00000244510.2	chr7:66481599:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1493:19461:14704	.	NO_LDAS	0.0034	GT	1.8323	AG	1.8323	"[""INTRACHROMOSOMAL[chr7:0.03Mb]"",""LOCAL_REARRANGEMENT:-:[26760]""]"	chr7:66450071-chr7:66481599	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC006435.2--ODF2L	1	0	1.0	0.0	ONLY_REF_SPLICE	AC006435.2^ENSG00000263345.1	chr17:2377359:-	ODF2L^ENSG00000122417.15	chr1:86387086:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1168:39492:1560	.	YES_LDAS	0.0034	GT	1.9656	AG	1.8295	"[""INTERCHROMOSOMAL[chr17--chr1]""]"	chr17:2377359-chr1:86387086	False			0	Read count too low: 1 < 8	FAIL	1
AC006001.3--FZD6	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC006001.3^ENSG00000229180.7	chr7:66554424:-	FZD6^ENSG00000164930.12	chr8:103330022:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2282:39589:10921	.	YES_LDAS	0.0034	GT	1.5656	AG	1.7465	"[""INTERCHROMOSOMAL[chr7--chr8]""]"	chr7:66554424-chr8:103330022	False			0	Read count too low: 1 < 8	FAIL	1
AC005740.1--C16orf46	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC005740.1^ENSG00000226040.3	chr5:141896266:-	C16orf46^ENSG00000166455.14	chr16:81054094:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1351:13135:4083	.	YES_LDAS	0.0017	GT	1.8062	AG	1.3383	"[""INTERCHROMOSOMAL[chr5--chr16]""]"	chr5:141896266-chr16:81054094	False			0	Read count too low: 1 < 8	FAIL	1
AC005726.2--DNAJC17	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC005726.2^ENSG00000264044.1	chr17:28633967:+	DNAJC17^ENSG00000104129.10	chr15:40773762:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2220:17504:25353	.	YES_LDAS	0.0017	GT	1.5058	AG	1.6895	"[""INTERCHROMOSOMAL[chr17--chr15]""]"	chr17:28633967-chr15:40773762	False			0	Read count too low: 1 < 8	FAIL	1
AC005410.2--ZNF18	1	0	1.0	0.0	ONLY_REF_SPLICE	AC005410.2^ENSG00000266368.1	chr17:11977248:-	ZNF18^ENSG00000154957.14	chr17:11978744:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1241:20554:13989	.	YES_LDAS	0.0034	GT	1.8256	AG	1.5329	"[""INTRACHROMOSOMAL[chr17:0.00Mb]"",""NEIGHBORS_OVERLAP:-:-:[155]""]"	chr17:11977248-chr17:11978744	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC005336.1--UBE2D1	1	0	0.5	0.0	INCL_NON_REF_SPLICE	AC005336.1^ENSG00000267056.2	chr19:15911549:-	UBE2D1^ENSG00000072401.15	chr10:58361338:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1488:44654:14816	.	YES_LDAS	0.0017	GT	1.7056	AG	1.8256	"[""INTERCHROMOSOMAL[chr19--chr10]""]"	chr19:15911549-chr10:58361338	False			0	Read count too low: 1 < 8	FAIL	1
AC004967.1--ARL8B	1	0	1.0	0.0	ONLY_REF_SPLICE	AC004967.1^ENSG00000243554.1	chr7:97972135:-	ARL8B^ENSG00000134108.14	chr3:5172150:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1480:2391:4363	.	NO_LDAS	0.0034	GT	1.4566	AG	1.9086	"[""INTERCHROMOSOMAL[chr7--chr3]""]"	chr7:97972135-chr3:5172150	False			0	Read count too low: 1 < 8	FAIL	1
AC004923.1--ZBTB1	1	0	0.09	0.0	ONLY_REF_SPLICE	AC004923.1^ENSG00000254610.3	chr11:67955482:-	ZBTB1^ENSG00000126804.13	chr14:64516600:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1395:22074:24106	.	YES_LDAS	0.0003	GT	1.4566	AG	1.8323	"[""INTERCHROMOSOMAL[chr11--chr14]""]"	chr11:67955482-chr14:64516600	False			0	Read count too low: 1 < 8	FAIL	1
AC004846.2--NUMB	1	0	1.0	0.0	ONLY_REF_SPLICE	AC004846.2^ENSG00000258944.1	chr14:73273939:-	NUMB^ENSG00000133961.20	chr14:73277293:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2287:20618:29375	.	YES_LDAS	0.0034	GT	1.8892	AG	1.7232	"[""INTRACHROMOSOMAL[chr14:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1026]""]"	chr14:73273939-chr14:73277293	False			0	Read count too low: 1 < 8	FAIL	1
AC004596.1--AC132217.2	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AC004596.1^ENSG00000267394.1	chr17:44198930:+	AC132217.2^ENSG00000284779.2	chr11:2135529:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1470:8807:13093	.	YES_LDAS	0.0034	GT	1.7056	AG	1.8892	"[""INTERCHROMOSOMAL[chr17--chr11]""]"	chr17:44198930-chr11:2135529	False			0	Read count too low: 1 < 8	FAIL	1
AC004083.1--TMEM64	1	0	1.0	0.0	ONLY_REF_SPLICE	AC004083.1^ENSG00000254180.2	chr8:90618949:-	TMEM64^ENSG00000180694.14	chr8:90631707:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2411:51498:21206	.	YES_LDAS	0.0034	GT	1.6895	AG	1.8062	"[""INTRACHROMOSOMAL[chr8:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[1918]""]"	chr8:90618949-chr8:90631707	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC003991.1--IKZF5	1	0	1.0	0.0	ONLY_REF_SPLICE	AC003991.1^ENSG00000228113.7	chr7:88253160:+	IKZF5^ENSG00000095574.12	chr10:122996176:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1269:32616:6185	.	NO_LDAS	0.0034	GT	1.9656	AG	1.8892	"[""INTERCHROMOSOMAL[chr7--chr10]""]"	chr7:88253160-chr10:122996176	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	1
AC002116.2--CFAP44	1	0	1.0	0.0	ONLY_REF_SPLICE	AC002116.2^ENSG00000267698.1	chr19:36019384:+	CFAP44^ENSG00000206530.11	chr3:113294038:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2408:29339:10767	.	NO_LDAS	0.0034	GT	1.585	AG	1.9656	"[""INTERCHROMOSOMAL[chr19--chr3]""]"	chr19:36019384-chr3:113294038	False			0	Read count too low: 1 < 8	FAIL	1
ABCC2--CUTC	1	0	1.0	0.0	ONLY_REF_SPLICE	ABCC2^ENSG00000023839.12	chr10:99782877:+	CUTC^ENSG00000119929.13	chr10:99747257:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2257:32454:27707	.	YES_LDAS	0.0034	GT	1.8295	AG	1.8892	"[""INTRACHROMOSOMAL[chr10:0.03Mb]"",""LOCAL_REARRANGEMENT:+:[26506]""]"	chr10:99782877-chr10:99747257	False			0	Read count too low: 1 < 8	FAIL	1
ABCB10--DENND1B	1	0	1.0	0.0	ONLY_REF_SPLICE	ABCB10^ENSG00000135776.5	chr1:229518841:-	DENND1B^ENSG00000213047.13	chr1:197583253:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2150:39905:3368	.	YES_LDAS	0.0034	GT	1.7465	AG	1.9656	"[""INTRACHROMOSOMAL[chr1:31.74Mb]""]"	chr1:229518841-chr1:197583253	False			0	Read count too low: 1 < 8	FAIL	1
ABCA9-AS1--LAMP3	1	0	1.0	0.0	ONLY_REF_SPLICE	ABCA9-AS1^ENSG00000231749.3	chr17:69022467:+	LAMP3^ENSG00000078081.8	chr3:183124214:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2417:22026:17436	.	YES_LDAS	0.0034	GT	1.9329	AG	1.8323	"[""INTERCHROMOSOMAL[chr17--chr3]""]"	chr17:69022467-chr3:183124214	False			0	Read count too low: 1 < 8	FAIL	1
ABCA11P--PLEKHH2	1	0	1.0	0.0	ONLY_REF_SPLICE	ABCA11P^ENSG00000251595.7	chr4:472575:-	PLEKHH2^ENSG00000152527.14	chr2:43745866:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1105:31936:18235	.	YES_LDAS	0.0034	GT	1.8892	AG	1.6402	"[""INTERCHROMOSOMAL[chr4--chr2]""]"	chr4:472575-chr2:43745866	False			0	Read count too low: 1 < 8	FAIL	1
ABCA11P--CEP295	1	0	0.5	0.0	ONLY_REF_SPLICE	ABCA11P^ENSG00000251595.7	chr4:472575:-	CEP295^ENSG00000166004.15	chr11:93721954:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2178:13451:29263	.	YES_LDAS	0.0017	GT	1.8892	AG	1.9329	"[""INTERCHROMOSOMAL[chr4--chr11]""]"	chr4:472575-chr11:93721954	False			0	Read count too low: 1 < 8	FAIL	1
AACSP1--ZNF354A	1	0	1.0	0.0	INCL_NON_REF_SPLICE	AACSP1^ENSG00000250420.8	chr5:178767130:-	ZNF354A^ENSG00000169131.13	chr5:178749984:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1312:1663:13555	.	NO_LDAS	0.0034	GC	1.8256	AG	1.9219	"[""INTRACHROMOSOMAL[chr5:0.03Mb]"",""NEIGHBORS[34202]""]"	chr5:178767130-chr5:178749984	False			0	Excluded SpliceType: INCL_NON_REF_SPLICE	FAIL	1
A4GALT--C2orf76	1	0	1.0	0.0	ONLY_REF_SPLICE	A4GALT^ENSG00000128274.17	chr22:42720797:-	C2orf76^ENSG00000186132.15	chr2:119339971:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1139:14260:20911	.	YES_LDAS	0.0034	GT	1.8892	AG	1.8892	"[""INTERCHROMOSOMAL[chr22--chr2]""]"	chr22:42720797-chr2:119339971	False			0	Read count too low: 1 < 8	FAIL	1
YIPF6--STARD8	1	1	1.0	1.0	ONLY_REF_SPLICE	YIPF6^ENSG00000181704.12	chrX:68522917:+	STARD8^ENSG00000130052.13	chrX:68665499:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1310:28182:19833	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1365:31540:15279	YES_LDAS	0.0068	GT	1.8892	AG	1.7819	"[""INTRACHROMOSOMAL[chrX:0.11Mb]""]"	chrX:68522917-chrX:68665499	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
TTC33--PRKAA1	1	1	1.0	0.5	ONLY_REF_SPLICE	TTC33^ENSG00000113638.14	chr5:40746798:-	PRKAA1^ENSG00000132356.11	chr5:40777586:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2297:20845:20183	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:20384:21654	YES_LDAS	0.0051	GT	1.6402	AG	1.8892	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3416]""]"	chr5:40746798-chr5:40777586	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
TTC33--PRKAA1	1	1	1.0	0.5	ONLY_REF_SPLICE	TTC33^ENSG00000113638.14	chr5:40728345:-	PRKAA1^ENSG00000132356.11	chr5:40771863:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2390:25270:14760	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2429:20384:21654	NO_LDAS	0.0051	GT	1.9086	AG	1.6402	"[""DEEPEST2019"",""INTRACHROMOSOMAL[chr5:0.00Mb]"",""LOCAL_REARRANGEMENT:-:[3416]""]"	chr5:40728345-chr5:40771863	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	2
PKD1--NPIPA3	1	1	0.5	0.08	INCL_NON_REF_SPLICE	PKD1^ENSG00000008710.20	chr16:2097868:-	NPIPA3^ENSG00000224712.12	chr16:14711620:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2423:12447:21696	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1162:40188:14228	YES_LDAS	0.002	GT	1.8323	AG	1.7465	"[""GTEx_recurrent_StarF2019"",""INTRACHROMOSOMAL[chr16:12.57Mb]""]"	chr16:2097868-chr16:14711620	False			0	Excluded annotation pattern: GTEx_recurrent_StarF2019	FAIL	2
CA13--CA3	1	1	1.0	0.17	ONLY_REF_SPLICE	CA13^ENSG00000185015.8	chr8:85268627:+	CA3^ENSG00000164879.7	chr8:85439712:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1203:6542:19931	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2138:16023:10150	YES_LDAS	0.004	GT	1.9086	AG	1.8892	"[""DGD_PARALOGS"",""ConjoinG"",""GTEx_recurrent_StarF2019"",""HGNC_GENEFAM"",""INTRACHROMOSOMAL[chr8:0.09Mb]"",""NEIGHBORS[89363]""]"	chr8:85268627-chr8:85439712	True	pair|recurrent breakpoints	aih_curated_blacklist score(3)	0	Blacklisted; aih_curated_blacklist score(3)	FAIL	2
AC114763.1--NXPH2	1	1	1.0	0.17	ONLY_REF_SPLICE	AC114763.1^ENSG00000228043.5	chr2:138436473:-	NXPH2^ENSG00000144227.5	chr2:138671665:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1454:20934:22018	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2221:32527:10682	YES_LDAS	0.004	GT	1.3996	AG	1.8295	"[""INTRACHROMOSOMAL[chr2:0.17Mb]""]"	chr2:138436473-chr2:138671665	False			0	Read count too low: 2 < 8	FAIL	2
WDR27--AL135910.1	1	2	1.0	0.33	INCL_NON_REF_SPLICE	WDR27^ENSG00000184465.16	chr6:169582836:-	AL135910.1^ENSG00000272848.2	chr6:169452439:-	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:4:1260:12771:3228	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1255:20473:1378,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:1337:48610:7011	NO_LDAS	0.0045	GT	1.6729	AG	1.9899	"[""INTRACHROMOSOMAL[chr6:0.00Mb]"",""NEIGHBORS[4737]""]"	chr6:169582836-chr6:169452439	True	pair|recurrent breakpoints		0	Blacklisted	FAIL	3
AC005993.1--RGS6	1	2	1.0	0.2	ONLY_REF_SPLICE	AC005993.1^ENSG00000266869.2	chr14:71908430:+	RGS6^ENSG00000182732.18	chr14:72352095:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:2:2116:7423:14676	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740	YES_LDAS	0.0041	GT	1.8892	AG	1.8323	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]"	chr14:71908430-chr14:72352095	False			0	Read count too low: 3 < 8	FAIL	3
AC005993.1--RGS6	1	2	1.0	0.2	INCL_NON_REF_SPLICE	AC005993.1^ENSG00000266869.2	chr14:71869984:+	RGS6^ENSG00000182732.18	chr14:72292287:+	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2435:42712:15517	&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:1366:30310:26516,&FFPE_HD835_01_RNA_0001_23LGNLLT4_3@LH00166:237:23LGNLLT4:3:2484:13798:18740	YES_LDAS	0.0041	GT	1.8062	AG	1.9656	"[""TCGA_StarF2019"",""CCLE_StarF2019"",""INTRACHROMOSOMAL[chr14:0.00Mb]"",""NEIGHBORS[3833]""]"	chr14:71869984-chr14:72292287	False			0	Read count too low: 3 < 8	FAIL	3