File Info
- Filename
- SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_19.FusionInspector.fusions.abridged.tsv
- Size
- 5.0 KB
- Workflow Run
- dev_rna_exp0005_2cae617
- Published
- May 16, 2026 6:05 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 2422 | 3 | 2422.00 | 3.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 35 | 2273 | 67.39 | 1.07 | GT | 1.8892 | AG | 1.7819 | 8.8089 | 627 | 0 |
| FGFR3--TACC3 | 3 | 0 | 3.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9566 | chr4:1806622:+ | TACC3^ENSG00000013810.20 | 27591 | chr4:1739703:+ | INCL_NON_REF_SPLICE | YES | 819 | 2298 | 0.00 | 0.00 | TC | 1.8892 | GG | 1.7819 | 0.0109 | 496 | 0 |
| TMPRSS2--ERG | 2150 | 0 | 2150.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 0 | 51 | 2151.00 | 41.37 | GT | 1.6895 | AG | 1.9219 | 7.8099 | 1104 | 0 |
| FGFR3--BAIAP2L1 | 765 | 0 | 765.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 35 | 32 | 21.28 | 23.21 | GT | 1.8892 | AG | 1.8062 | 2.7789 | 1171 | 0 |
| ETV6--NTRK3 | 631 | 2 | 631.00 | 2.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 2240 | 5 | 0.28 | 105.67 | GT | 1.7819 | AG | 1.9656 | 2.2994 | 1252 | 0 |
| ETV6--NTRK3 | 6 | 0 | 6.00 | 0.00 | ETV6^ENSG00000139083.11 | 9691 | chr12:11853561:+ | NTRK3^ENSG00000140538.16 | 40814 | chr15:88033045:- | ONLY_REF_SPLICE | YES | 1352 | 0 | 0.01 | 7.00 | GT | 1.6402 | AG | 1.8256 | 0.0218 | 1246 | 0 |
| TPM3--NTRK1 | 609 | 1 | 609.00 | 1.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 5835 | 19 | 0.10 | 30.55 | GT | 1.9329 | AG | 1.6895 | 2.2158 | 355 | 0 |
| LMNA--NTRK1 | 571 | 2 | 571.00 | 2.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 2314 | 142 | 0.25 | 4.01 | GT | 1.7465 | AG | 1.5058 | 2.0815 | 947 | 0 |
| NCOA4--RET | 450 | 1 | 450.00 | 1.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 2054 | 193 | 0.22 | 2.33 | GT | 1.9086 | AG | 1.8323 | 1.6382 | 5144 | 0 |
| CCDC6--RET | 420 | 3 | 420.00 | 3.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1542 | 193 | 0.27 | 2.19 | GT | 1.8892 | AG | 1.8323 | 1.5366 | 2092 | 0 |
| EML4--ALK | 377 | 0 | 377.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 664 | 25 | 0.57 | 14.54 | GT | 1.6895 | AG | 1.9086 | 1.3695 | 1550 | 0 |
| KIF5B--RET | 368 | 1 | 368.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 1209 | 9 | 0.31 | 37.00 | GT | 1.9656 | AG | 1.9656 | 1.3404 | 3178 | 0 |
| CD74--ROS1 | 337 | 0 | 337.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 17127 | 15 | 0.02 | 21.12 | GT | 1.7819 | AG | 1.7465 | 1.2242 | 2407 | 0 |
| SLC45A3--BRAF | 268 | 0 | 268.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 1316 | 269.00 | 0.20 | GT | 1.5628 | AG | 1.7465 | 0.9735 | 2599 | 0 |
| PAX8--PPARG | 251 | 1 | 251.00 | 1.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 64 | 11 | 3.89 | 21.08 | GT | 1.8295 | AG | 1.9329 | 0.9154 | 1923 | 0 |
| TFG--NTRK1 | 247 | 0 | 247.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1678 | 19 | 0.15 | 12.40 | GT | 1.9329 | AG | 1.6895 | 0.8972 | 883 | 0 |
| SLC34A2--ROS1 | 238 | 11 | 238.00 | 10.69 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 0 | 15 | 250.00 | 15.62 | GT | 1.8892 | AG | 1.7465 | 0.9033 | 999 | 0 |
| SLC34A2--ROS1 | 4 | 11 | 4.00 | 0.18 | SLC34A2^ENSG00000157765.13 | 6081 | chr4:25664327:+ | ROS1^ENSG00000047936.11 | 58023 | chr6:117324417:- | INCL_NON_REF_SPLICE | NO | 8 | 0 | 1.78 | 16.00 | GA | 1.8256 | TT | 1.5301 | 0.0152 | 997 | 0 |
| SLC34A2--ROS1 | 4 | 8 | 4.00 | 0.13 | SLC34A2^ENSG00000157765.13 | 6088 | chr4:25664334:+ | ROS1^ENSG00000047936.11 | 58028 | chr6:117324412:- | INCL_NON_REF_SPLICE | YES | 0 | 23 | 13.00 | 0.54 | GA | 1.7465 | TG | 1.8892 | 0.015 | 1002 | 0 |
| EGFR--SEPTIN14 | 218 | 2 | 218.00 | 2.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 4 | 20 | 44.20 | 10.52 | GT | 1.8892 | AG | 1.9899 | 0.7992 | 658 | 0 |
| STX16--NPEPL1 | 149 | 2 | 149.00 | 1.97 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 927 | 130 | 0.16 | 1.16 | GT | 1.7968 | AG | 1.8256 | 0.5484 | 1940 | 0 |
| STX16--NPEPL1 | 5 | 1 | 5.00 | 0.03 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 925 | 130 | 0.01 | 0.05 | GT | 1.8062 | AG | 1.8256 | 0.0183 | 2729 | 0 |
| STX16--NPEPL1 | 1 | 0 | 1.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1589 | 130 | 0.00 | 0.02 | GT | 1.9899 | AG | 1.8256 | 0.0036 | 1258 | 0 |
| TLK2--AC240565.1 | 50 | 0 | 50.00 | 0.00 | TLK2^ENSG00000146872.18 | 17137 | chr17:62560126:+ | AC240565.1^ENSG00000280136.2 | 41242 | chr17:106864:- | ONLY_REF_SPLICE | YES | 480 | 31 | 0.11 | 1.59 | GT | 1.8892 | AG | 1.8892 | 0.1816 | 1734 | 0 |
25 rows