File Info
- Filename
- SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13.FusionInspector.fusions.abridged.tsv
- Full Path
- s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/SS_FFPE_V4_0001_RNA_0011_23LGNLLT4_13.FusionInspector.fusions.abridged.tsv
- Size
- 4.2 KB
- Workflow Run
- dev_rna_exp0005_2cae617
- Published
- May 16, 2026 6:11 AM
Content
View in new tab| #FusionName | JunctionReadCount | SpanningFragCount | est_J | est_S | LeftGene | LeftLocalBreakpoint | LeftBreakpoint | RightGene | RightLocalBreakpoint | RightBreakpoint | SpliceType | LargeAnchorSupport | NumCounterFusionLeft | NumCounterFusionRight | FAR_left | FAR_right | LeftBreakDinuc | LeftBreakEntropy | RightBreakDinuc | RightBreakEntropy | FFPM | microh_brkpt_dist | num_microh_near_brkpt |
| FGFR3--TACC3 | 649 | 0 | 649.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | TACC3^ENSG00000013810.20 | 27590 | chr4:1739702:+ | ONLY_REF_SPLICE | YES | 17 | 1892 | 36.11 | 0.34 | GT | 1.8892 | AG | 1.7819 | 2.7363 | 627 | 0 |
| TMPRSS2--ERG | 593 | 0 | 593.00 | 0.00 | TMPRSS2^ENSG00000184012.14 | 4652 | chr21:41508081:- | ERG^ENSG00000157554.19 | 28751 | chr21:38584945:- | ONLY_REF_SPLICE | YES | 1 | 9 | 297.00 | 59.40 | GT | 1.6895 | AG | 1.9219 | 2.5002 | 1104 | 0 |
| ETV6--NTRK3 | 191 | 0 | 191.00 | 0.00 | ETV6^ENSG00000139083.11 | 11237 | chr12:11869969:+ | NTRK3^ENSG00000140538.16 | 46238 | chr15:87940753:- | ONLY_REF_SPLICE | YES | 1738 | 1 | 0.11 | 96.00 | GT | 1.7819 | AG | 1.9656 | 0.8053 | 1252 | 0 |
| STX16--NPEPL1 | 168 | 2 | 168.00 | 1.98 | STX16^ENSG00000124222.22 | 8855 | chr20:58673711:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 848 | 147 | 0.20 | 1.16 | GT | 1.7968 | AG | 1.8256 | 0.7166 | 1940 | 0 |
| STX16--NPEPL1 | 8 | 0 | 8.00 | 0.00 | STX16^ENSG00000124222.22 | 1835 | chr20:58652087:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 1304 | 147 | 0.01 | 0.06 | GT | 1.9899 | AG | 1.8256 | 0.0337 | 1258 | 0 |
| STX16--NPEPL1 | 3 | 1 | 3.00 | 0.02 | STX16^ENSG00000124222.22 | 7774 | chr20:58671297:+ | NPEPL1^ENSG00000215440.12 | 17277 | chr20:58691724:+ | ONLY_REF_SPLICE | YES | 840 | 147 | 0.01 | 0.03 | GT | 1.8062 | AG | 1.8256 | 0.0127 | 2729 | 0 |
| TPM3--NTRK1 | 151 | 0 | 151.00 | 0.00 | TPM3^ENSG00000143549.21 | 13389 | chr1:154170400:- | NTRK1^ENSG00000198400.13 | 42070 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 4902 | 6 | 0.03 | 21.71 | GT | 1.9329 | AG | 1.6895 | 0.6366 | 355 | 0 |
| FGFR3--BAIAP2L1 | 149 | 0 | 149.00 | 0.00 | FGFR3^ENSG00000068078.20 | 9878 | chr4:1806934:+ | BAIAP2L1^ENSG00000006453.14 | 16927 | chr7:98362432:- | ONLY_REF_SPLICE | YES | 17 | 25 | 8.33 | 5.77 | GT | 1.8892 | AG | 1.8062 | 0.6282 | 1171 | 0 |
| CCDC6--RET | 140 | 0 | 140.00 | 0.00 | CCDC6^ENSG00000108091.11 | 1435 | chr10:59906122:- | RET^ENSG00000165731.20 | 31587 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1217 | 48 | 0.12 | 2.88 | GT | 1.8892 | AG | 1.8323 | 0.5903 | 2092 | 0 |
| LMNA--NTRK1 | 138 | 0 | 138.00 | 0.00 | LMNA^ENSG00000160789.23 | 17733 | chr1:156130773:+ | NTRK1^ENSG00000198400.13 | 40289 | chr1:156874906:+ | ONLY_REF_SPLICE | YES | 1149 | 51 | 0.12 | 2.67 | GT | 1.7465 | AG | 1.5058 | 0.5818 | 947 | 0 |
| NCOA4--RET | 93 | 0 | 93.00 | 0.00 | NCOA4^ENSG00000266412.6 | 9075 | chr10:46012883:- | RET^ENSG00000165731.20 | 30127 | chr10:43116584:+ | ONLY_REF_SPLICE | YES | 1581 | 48 | 0.06 | 1.92 | GT | 1.9086 | AG | 1.8323 | 0.3921 | 5144 | 0 |
| KIF5B--RET | 88 | 1 | 88.00 | 1.00 | KIF5B^ENSG00000170759.11 | 19977 | chr10:32017143:- | RET^ENSG00000165731.20 | 38832 | chr10:43114480:+ | ONLY_REF_SPLICE | YES | 908 | 2 | 0.10 | 30.00 | GT | 1.9656 | AG | 1.9656 | 0.3752 | 3178 | 0 |
| CD74--ROS1 | 82 | 0 | 82.00 | 0.00 | CD74^ENSG00000019582.16 | 4990 | chr5:150404680:- | ROS1^ENSG00000047936.11 | 48731 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 14199 | 6 | 0.01 | 11.86 | GT | 1.7819 | AG | 1.7465 | 0.3457 | 2407 | 0 |
| SLC34A2--ROS1 | 76 | 3 | 76.00 | 3.00 | SLC34A2^ENSG00000157765.13 | 6084 | chr4:25664330:+ | ROS1^ENSG00000047936.11 | 58025 | chr6:117324415:- | ONLY_REF_SPLICE | YES | 1 | 6 | 40.00 | 11.43 | GT | 1.8892 | AG | 1.7465 | 0.333 | 999 | 0 |
| PAX8--PPARG | 75 | 0 | 75.00 | 0.00 | PAX8^ENSG00000125618.18 | 9714 | chr2:113235394:- | PPARG^ENSG00000132170.23 | 31404 | chr3:12379704:+ | ONLY_REF_SPLICE | YES | 48 | 8 | 1.55 | 8.44 | GT | 1.8295 | AG | 1.9329 | 0.3162 | 1923 | 0 |
| EML4--ALK | 74 | 0 | 74.00 | 0.00 | EML4^ENSG00000143924.19 | 17400 | chr2:42295516:+ | ALK^ENSG00000171094.18 | 59003 | chr2:29223528:- | ONLY_REF_SPLICE | YES | 521 | 30 | 0.14 | 2.42 | GT | 1.6895 | AG | 1.9086 | 0.312 | 1550 | 0 |
| TFG--NTRK1 | 64 | 0 | 64.00 | 0.00 | TFG^ENSG00000114354.15 | 9135 | chr3:100732672:+ | NTRK1^ENSG00000198400.13 | 37655 | chr1:156874571:+ | ONLY_REF_SPLICE | YES | 1278 | 6 | 0.05 | 9.29 | GT | 1.9329 | AG | 1.6895 | 0.2698 | 883 | 0 |
| SLC45A3--BRAF | 60 | 0 | 60.00 | 0.00 | SLC45A3^ENSG00000158715.6 | 1116 | chr1:205680394:- | BRAF^ENSG00000157764.14 | 25172 | chr7:140794467:- | ONLY_REF_SPLICE | YES | 0 | 1099 | 61.00 | 0.06 | GT | 1.5628 | AG | 1.7465 | 0.253 | 2599 | 0 |
| EGFR--SEPTIN14 | 41 | 0 | 41.00 | 0.00 | EGFR^ENSG00000146648.19 | 30734 | chr7:55200413:+ | SEPTIN14^ENSG00000154997.9 | 54769 | chr7:55796092:- | ONLY_REF_SPLICE | YES | 2 | 24 | 14.00 | 1.68 | GT | 1.8892 | AG | 1.9899 | 0.1729 | 658 | 0 |
| AL391056.1--ATAD5 | 27 | 0 | 27.00 | 0.00 | AL391056.1^ENSG00000227619.3 | 5982 | chr9:129582768:+ | ATAD5^ENSG00000176208.9 | 15120 | chr17:30837206:+ | ONLY_REF_SPLICE | YES | 0 | 221 | 28.00 | 0.13 | GT | 1.9329 | AG | 1.8295 | 0.1138 | 1935 | 0 |
21 rows