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tih_rna_sample_00298_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/tih_rna_sample_00298_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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6.9 KB
Workflow Run
dev_rna_exp0005_2cae617
Published
May 16, 2026 6:38 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
GPBP1L1--STIL 604 9 604.00 9.00 GPBP1L1^ENSG00000159592.11 16117 chr1:45633489:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 1600 468 0.38 1.31 GT 1.8323 AG 1.9656 2.0623 913 0
GPBP1L1--STIL 54 0 54.00 0.00 GPBP1L1^ENSG00000159592.11 12881 chr1:45640210:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 2321 468 0.02 0.12 GT 1.6729 AG 1.9656 0.1817 1270 0
GPBP1L1--STIL 1 0 1.00 0.00 GPBP1L1^ENSG00000159592.11 15510 chr1:45634096:- STIL^ENSG00000123473.16 27013 chr1:47304996:- ONLY_REF_SPLICE YES 3078 468 0.00 0.00 GT 1.9656 AG 1.9656 0.0034 350 0
STX16--NPEPL1 260 5 260.00 5.00 STX16^ENSG00000124222.22 8855 chr20:58673711:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1115 39 0.24 6.65 GT 1.7968 AG 1.8256 0.8915 1940 0
STX16--NPEPL1 7 0 7.00 0.00 STX16^ENSG00000124222.22 7774 chr20:58671297:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1079 39 0.01 0.20 GT 1.8062 AG 1.8256 0.0235 2729 0
STX16--NPEPL1 3 0 3.00 0.00 STX16^ENSG00000124222.22 1835 chr20:58652087:+ NPEPL1^ENSG00000215440.12 17277 chr20:58691724:+ ONLY_REF_SPLICE YES 1905 39 0.00 0.10 GT 1.9899 AG 1.8256 0.0101 1258 0
TMEM59--CDH6 244 1 244.00 1.00 TMEM59^ENSG00000116209.12 1505 chr1:54053000:- CDH6^ENSG00000113361.13 37509 chr5:31322818:+ ONLY_REF_SPLICE YES 2519 110 0.10 2.22 GT 1.6895 AG 1.8323 0.8243 338 0
TMEM59--CDH6 2 0 2.00 0.00 TMEM59^ENSG00000116209.12 1149 chr1:54053356:- CDH6^ENSG00000113361.13 37509 chr5:31322818:+ ONLY_REF_SPLICE YES 43 110 0.07 0.03 GT 1.9899 AG 1.8323 0.0067 25 1
PSMB2--CCDC30 176 3 176.00 2.99 PSMB2^ENSG00000126067.12 4735 chr1:35609246:- CCDC30^ENSG00000186409.18 42853 chr1:42566296:+ ONLY_REF_SPLICE YES 1326 41 0.14 4.29 GT 1.8323 AG 1.9329 0.6022 3429 0
PSMB2--CCDC30 1 1 1.00 0.01 PSMB2^ENSG00000126067.12 4735 chr1:35609246:- CCDC30^ENSG00000186409.18 44256 chr1:42577020:+ ONLY_REF_SPLICE YES 1326 140 0.00 0.02 GT 1.8323 AG 1.6402 0.0034 2172 0
TLK2--LINC01347 97 1 97.00 1.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ LINC01347^ENSG00000214837.8 41405 chr1:243097299:- ONLY_REF_SPLICE YES 364 91 0.27 1.08 GT 1.8892 AG 1.8892 0.3297 1623 0
PPIH--TCEANC2 73 5 73.00 2.26 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 21855 chr1:54098206:+ INCL_NON_REF_SPLICE YES 1471 9 0.05 7.90 GT 1.5058 AG 1.7819 0.2532 1191 0
PPIH--TCEANC2 54 2 54.00 0.48 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 30732 chr1:54111052:+ ONLY_REF_SPLICE YES 1471 2 0.04 19.00 GT 1.5058 AG 1.9329 0.1833 994 0
PPIH--TCEANC2 40 11 40.00 7.42 PPIH^ENSG00000171960.12 7277 chr1:42666711:+ TCEANC2^ENSG00000116205.14 19949 chr1:54096300:+ INCL_NON_REF_SPLICE NO 1380 81 0.04 0.63 AA 1.9656 TG 1.5058 0.1596 1130 0
PPIH--TCEANC2 35 3 35.00 0.52 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 28985 chr1:54105336:+ INCL_NON_REF_SPLICE YES 1471 8 0.03 4.33 GT 1.5058 AG 1.9656 0.1194 1000 0
PPIH--TCEANC2 7 4 7.00 0.16 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 28214 chr1:54104565:+ INCL_NON_REF_SPLICE YES 1471 100 0.01 0.12 GT 1.5058 AG 1.8323 0.024 338 0
PPIH--TCEANC2 5 5 5.00 0.15 PPIH^ENSG00000171960.12 7153 chr1:42666587:+ TCEANC2^ENSG00000116205.14 20258 chr1:54096609:+ INCL_NON_REF_SPLICE YES 1471 28 0.01 0.38 GT 1.5058 AG 1.8323 0.0173 1242 0
PRKAA1--C5orf51 61 0 61.00 0.00 PRKAA1^ENSG00000132356.11 1312 chr5:40798063:- C5orf51^ENSG00000205765.9 19564 chr5:41907736:+ ONLY_REF_SPLICE YES 857 313 0.07 0.20 GT 1.8323 AG 1.4566 0.2052 1753 0
PTPRF--LINC01707 59 2 59.00 1.66 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 47783 chr1:69189628:+ ONLY_REF_SPLICE YES 2995 1 0.02 31.00 GT 1.9656 AG 1.8256 0.2041 3559 0
PTPRF--LINC01707 12 2 12.00 0.34 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 45473 chr1:69182770:+ ONLY_REF_SPLICE YES 2995 1 0.01 7.50 GT 1.9656 AG 1.8256 0.0415 1386 0
PTPRF--LINC01707 3 0 3.00 0.00 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 54732 chr1:69218364:+ ONLY_REF_SPLICE YES 2995 1 0.00 2.00 GT 1.9656 AG 1.9899 0.0101 841 0
PTPRF--LINC01707 1 0 1.00 0.00 PTPRF^ENSG00000142949.17 10465 chr1:43578920:+ LINC01707^ENSG00000223883.2 48918 chr1:69192434:+ ONLY_REF_SPLICE YES 2995 0 0.00 2.00 GT 1.9656 AG 1.9219 0.0034 2625 0
TESK2--USP24 57 0 57.00 0.00 TESK2^ENSG00000070759.17 3742 chr1:45421725:- USP24^ENSG00000162402.14 46618 chr1:55121506:- ONLY_REF_SPLICE YES 103 346 0.56 0.17 GT 1.8062 AG 1.5301 0.1918 4180 0
TPPP--TESK2 42 0 42.00 0.00 TPPP^ENSG00000171368.12 2390 chr5:677750:- TESK2^ENSG00000070759.17 13965 chr1:45457871:- ONLY_REF_SPLICE YES 214 35 0.20 1.19 GT 1.8892 AG 1.8295 0.1413 2159 0
TPPP--TESK2 4 0 4.00 0.00 TPPP^ENSG00000171368.12 2390 chr5:677750:- TESK2^ENSG00000070759.17 15273 chr1:45421846:- ONLY_REF_SPLICE YES 214 179 0.02 0.03 GT 1.8892 AG 1.9329 0.0135 3007 0
GHR--LIFR-AS1 32 0 32.00 0.00 GHR^ENSG00000112964.14 8230 chr5:42565944:+ LIFR-AS1^ENSG00000244968.7 34187 chr5:38594922:+ ONLY_REF_SPLICE YES 118 0 0.28 33.00 GT 1.7819 AG 1.5058 0.1077 3172 0
SYNJ2--SNX9 26 0 26.00 0.00 SYNJ2^ENSG00000078269.15 8770 chr6:158033680:+ SNX9^ENSG00000130340.17 73566 chr6:157942791:+ ONLY_REF_SPLICE YES 359 812 0.07 0.03 GT 1.6895 AG 1.8892 0.0875 1362 0
THRAP3--AL031985.4 26 0 26.00 0.00 THRAP3^ENSG00000054118.15 7911 chr1:36289764:+ AL031985.4^ENSG00000284677.1 21297 chr1:40438566:- ONLY_REF_SPLICE YES 816 1 0.03 13.50 GT 1.9086 AG 1.7819 0.0875 1171 0
THRAP3--AL031985.4 1 0 1.00 0.00 THRAP3^ENSG00000054118.15 7911 chr1:36289764:+ AL031985.4^ENSG00000284677.1 22544 chr1:40436611:- ONLY_REF_SPLICE YES 816 2 0.00 0.67 GT 1.9086 AG 1.8295 0.0034 1054 0
RBFOX1--PPIE 22 0 22.00 0.00 RBFOX1^ENSG00000078328.22 5626 chr16:5867335:+ PPIE^ENSG00000084072.17 73756 chr1:39763689:+ ONLY_REF_SPLICE YES 290 154 0.08 0.15 GT 1.7819 AG 1.5546 0.074 1616 0
RBFOX1--PPIE 6 0 6.00 0.00 RBFOX1^ENSG00000078328.22 5626 chr16:5867335:+ PPIE^ENSG00000084072.17 72621 chr1:39762517:+ ONLY_REF_SPLICE YES 290 131 0.02 0.05 GT 1.7819 AG 1.9219 0.0202 1736 0
EPS15--CLSPN 20 0 20.00 0.00 EPS15^ENSG00000085832.17 2110 chr1:51481273:- CLSPN^ENSG00000092853.14 53633 chr1:35739529:- ONLY_REF_SPLICE YES 477 89 0.04 0.23 GT 1.7232 AG 1.5219 0.0673 2717 0
MTMR12--AC093277.1 18 0 18.00 0.00 MTMR12^ENSG00000150712.11 1230 chr5:32312758:- AC093277.1^ENSG00000283286.1 26868 chr5:40429932:+ ONLY_REF_SPLICE YES 284 3 0.07 4.75 GT 1.9656 AG 1.9899 0.0606 734 0
CPLANE1--FAAH 14 0 14.00 0.00 CPLANE1^ENSG00000197603.16 22475 chr5:37195858:- FAAH^ENSG00000117480.16 65668 chr1:46402091:+ ONLY_REF_SPLICE YES 112 1396 0.13 0.01 GT 1.9219 AG 1.7819 0.0471 2730 0
35 rows