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tih_rna_sample_00375_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/tih_rna_sample_00375_23LGNLLT4_1.FusionInspector.fusions.abridged.tsv
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10.9 KB
Workflow Run
dev_rna_exp0005_2cae617
Published
May 16, 2026 6:46 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
MSL1--MED24 667 1 667.00 0.99 MSL1^ENSG00000188895.12 11028 chr17:40133899:+ MED24^ENSG00000008838.20 21716 chr17:40036154:- ONLY_REF_SPLICE YES 811 1193 0.82 0.56 GT 1.4566 AG 1.8892 2.4859 360 0
MSL1--MED24 33 0 33.00 0.00 MSL1^ENSG00000188895.12 11028 chr17:40133899:+ MED24^ENSG00000008838.20 22075 chr17:40035795:- ONLY_REF_SPLICE YES 811 1223 0.04 0.03 GT 1.4566 AG 1.6049 0.1228 59 1
MSL1--MED24 4 1 4.00 0.01 MSL1^ENSG00000188895.12 11028 chr17:40133899:+ MED24^ENSG00000008838.20 21719 chr17:40036151:- INCL_NON_REF_SPLICE YES 811 1220 0.01 0.00 GT 1.4566 TG 1.6895 0.0149 357 0
NSD1--UNC5A 654 1 654.00 1.00 NSD1^ENSG00000165671.21 12500 chr5:177212195:+ UNC5A^ENSG00000113763.12 47364 chr5:176862624:+ ONLY_REF_SPLICE YES 499 234 1.31 2.79 GT 1.8892 AG 1.8892 2.4375 1243 0
AATK--RPTOR 503 6 503.00 5.15 AATK^ENSG00000181409.14 1284 chr17:81165938:- RPTOR^ENSG00000141564.15 30641 chr17:80625691:+ ONLY_REF_SPLICE YES 391 1011 1.30 0.50 GT 1.7232 AG 1.8892 1.8911 3363 0
AATK--RPTOR 81 6 81.00 0.83 AATK^ENSG00000181409.14 1540 chr17:81165682:- RPTOR^ENSG00000141564.15 30641 chr17:80625691:+ ONLY_REF_SPLICE YES 151 1011 0.58 0.09 GT 1.7819 AG 1.8892 0.3045 3266 0
AATK--RPTOR 6 0 6.00 0.00 AATK^ENSG00000181409.14 1284 chr17:81165938:- RPTOR^ENSG00000141564.15 35101 chr17:80730560:+ ONLY_REF_SPLICE YES 391 603 0.02 0.01 GT 1.7232 AG 1.8323 0.0223 2536 0
AATK--RPTOR 4 1 4.00 0.01 AATK^ENSG00000181409.14 1540 chr17:81165682:- RPTOR^ENSG00000141564.15 31744 chr17:80643728:+ ONLY_REF_SPLICE YES 151 1113 0.04 0.01 GT 1.7819 AG 1.9329 0.0149 4317 0
AATK--RPTOR 3 1 3.00 0.01 AATK^ENSG00000181409.14 1284 chr17:81165938:- RPTOR^ENSG00000141564.15 31744 chr17:80643728:+ ONLY_REF_SPLICE YES 391 1113 0.01 0.00 GT 1.7232 AG 1.9329 0.0112 4391 0
AATK--RPTOR 3 1 3.00 0.01 AATK^ENSG00000181409.14 1292 chr17:81165930:- RPTOR^ENSG00000141564.15 30712 chr17:80625762:+ INCL_NON_REF_SPLICE YES 368 1159 0.01 0.00 CT 1.8323 AC 1.7968 0.0112 3425 0
AATK--RPTOR 3 0 3.00 0.00 AATK^ENSG00000181409.14 1284 chr17:81165938:- RPTOR^ENSG00000141564.15 32827 chr17:80707841:+ ONLY_REF_SPLICE YES 391 643 0.01 0.01 GT 1.7232 AG 1.8256 0.0112 4808 0
GALNT7--KLHL8 262 1 262.00 0.98 GALNT7^ENSG00000109586.12 2612 chr4:173248440:+ KLHL8^ENSG00000145332.14 31792 chr4:87170615:- ONLY_REF_SPLICE YES 1016 50 0.26 5.18 GT 1.8892 AG 1.9656 0.9786 3564 0
GALNT7--KLHL8 4 1 4.00 0.02 GALNT7^ENSG00000109586.12 2610 chr4:173248438:+ KLHL8^ENSG00000145332.14 31794 chr4:87170613:- INCL_NON_REF_SPLICE YES 1052 57 0.01 0.10 GA 1.8892 GC 1.8892 0.015 3564 0
ZNF184--PPP1R1B 234 2 234.00 2.00 ZNF184^ENSG00000096654.15 1831 chr6:27472288:- PPP1R1B^ENSG00000131771.14 13408 chr17:39629170:+ ONLY_REF_SPLICE YES 77 7154 3.04 0.03 GT 1.9656 AG 1.8062 0.8782 3906 0
STARD3--GRB7 192 0 192.00 0.00 STARD3^ENSG00000131748.16 1142 chr17:39637231:+ GRB7^ENSG00000141738.14 18985 chr17:39742252:+ ONLY_REF_SPLICE YES 773 1157 0.25 0.17 GT 1.8892 AG 1.5301 0.7145 424 0
STARD3--GRB7 4 0 4.00 0.00 STARD3^ENSG00000131748.16 1131 chr17:39637220:+ GRB7^ENSG00000141738.14 18979 chr17:39742246:+ INCL_NON_REF_SPLICE YES 762 1036 0.01 0.00 AC 1.3996 CT 1.5656 0.0149 426 0
STARD3--GRB7 3 0 3.00 0.00 STARD3^ENSG00000131748.16 1426 chr17:39637515:+ GRB7^ENSG00000141738.14 18985 chr17:39742252:+ ONLY_REF_SPLICE YES 782 1157 0.01 0.00 GT 0.9183 AG 1.5301 0.0112 574 0
ERBB2--TCAP 187 1 187.00 0.87 ERBB2^ENSG00000141736.14 27006 chr17:39730263:+ TCAP^ENSG00000173991.6 30537 chr17:39665716:+ INCL_NON_REF_SPLICE YES 2279 251 0.08 0.75 GT 1.8892 AG 1.8892 0.6991 429 0
ERBB2--TCAP 27 2 27.00 1.13 ERBB2^ENSG00000141736.14 27006 chr17:39730263:+ TCAP^ENSG00000173991.6 30194 chr17:39665373:+ INCL_NON_REF_SPLICE YES 2279 166 0.01 0.18 GT 1.8892 AG 1.8295 0.1047 771 0
OCLN--HAPLN1 185 0 185.00 0.00 OCLN^ENSG00000197822.12 10682 chr5:69534839:+ HAPLN1^ENSG00000145681.11 30219 chr5:83652824:- ONLY_REF_SPLICE YES 162 45 1.14 4.04 GT 1.7819 AG 1.7819 0.6885 1790 0
OCLN--HAPLN1 25 0 25.00 0.00 OCLN^ENSG00000197822.12 10682 chr5:69534839:+ HAPLN1^ENSG00000145681.11 30222 chr5:83652821:- ONLY_REF_SPLICE YES 162 50 0.16 0.51 GT 1.7819 AG 1.8323 0.093 1789 0
OCLN--HAPLN1 3 0 3.00 0.00 OCLN^ENSG00000197822.12 6703 chr5:69514109:+ HAPLN1^ENSG00000145681.11 30219 chr5:83652824:- ONLY_REF_SPLICE YES 275 45 0.01 0.09 GT 1.7465 AG 1.7819 0.0112 1385 0
TANC2--PCTP 156 0 156.00 0.00 TANC2^ENSG00000170921.15 2143 chr17:63074014:+ PCTP^ENSG00000141179.14 52063 chr17:55767335:+ ONLY_REF_SPLICE YES 593 105 0.26 1.48 GT 1.8323 AG 1.9086 0.5805 1344 0
TANC2--PCTP 4 0 4.00 0.00 TANC2^ENSG00000170921.15 1071 chr17:63009626:+ PCTP^ENSG00000141179.14 52063 chr17:55767335:+ ONLY_REF_SPLICE YES 278 105 0.02 0.05 GT 1.7968 AG 1.9086 0.0149 1699 0
COBLL1--LSAMP 152 0 152.00 0.00 COBLL1^ENSG00000082438.18 3277 chr2:164841156:- LSAMP^ENSG00000185565.12 52893 chr3:115842578:- ONLY_REF_SPLICE YES 355 16 0.43 9.00 GT 1.5058 AG 1.5301 0.5656 5308 0
DEPDC1B--UNC5A 127 0 127.00 0.00 DEPDC1B^ENSG00000035499.13 9902 chr5:60638750:- UNC5A^ENSG00000113763.12 21222 chr5:176862624:+ ONLY_REF_SPLICE YES 35 234 3.56 0.54 GT 1.8323 AG 1.8892 0.4726 3217 0
DEPDC1B--UNC5A 1 0 1.00 0.00 DEPDC1B^ENSG00000035499.13 8761 chr5:60642812:- UNC5A^ENSG00000113763.12 21222 chr5:176862624:+ ONLY_REF_SPLICE YES 87 234 0.02 0.01 GT 1.8062 AG 1.8892 0.0037 2209 0
STRN3--AL135878.1 117 0 117.00 0.00 STRN3^ENSG00000196792.12 1498 chr14:31025904:- AL135878.1^ENSG00000258028.3 27438 chr14:28986400:+ ONLY_REF_SPLICE YES 135 3 0.87 29.50 GT 1.7819 AG 1.6895 0.4354 5425 0
STRN3--AL135878.1 26 0 26.00 0.00 STRN3^ENSG00000196792.12 1498 chr14:31025904:- AL135878.1^ENSG00000258028.3 29749 chr14:29018953:+ ONLY_REF_SPLICE YES 135 2 0.20 9.00 GT 1.7819 AG 1.9899 0.0968 4377 0
STRN3--AL135878.1 1 0 1.00 0.00 STRN3^ENSG00000196792.12 1498 chr14:31025904:- AL135878.1^ENSG00000258028.3 30884 chr14:29021280:+ ONLY_REF_SPLICE YES 135 2 0.01 0.67 GT 1.7819 AG 1.9086 0.0037 3285 0
EOGT--LMOD3 87 0 87.00 0.00 EOGT^ENSG00000163378.14 7646 chr3:69004378:- LMOD3^ENSG00000163380.16 26208 chr3:69109121:- ONLY_REF_SPLICE YES 81 0 1.07 88.00 GT 1.8892 AG 1.8892 0.3238 891 0
UNC119--PCTP 67 0 67.00 0.00 UNC119^ENSG00000109103.12 1294 chr17:28552338:- PCTP^ENSG00000141179.14 14729 chr17:55771106:+ ONLY_REF_SPLICE YES 111 80 0.61 0.84 GT 1.8892 AG 1.8295 0.2493 259 0
UNC119--PCTP 24 0 24.00 0.00 UNC119^ENSG00000109103.12 5040 chr17:28548592:- PCTP^ENSG00000141179.14 14729 chr17:55771106:+ ONLY_REF_SPLICE YES 122 80 0.20 0.31 GT 1.8295 AG 1.8295 0.0893 593 0
TGIF1--DLGAP1 52 0 52.00 0.00 TGIF1^ENSG00000177426.22 8043 chr18:3450505:+ DLGAP1^ENSG00000170579.17 48924 chr18:3534615:- ONLY_REF_SPLICE YES 312 2 0.17 17.67 GT 1.5329 AG 1.8892 0.1935 122 0
TGIF1--DLGAP1 4 0 4.00 0.00 TGIF1^ENSG00000177426.22 5335 chr18:3447797:+ DLGAP1^ENSG00000170579.17 48924 chr18:3534615:- ONLY_REF_SPLICE YES 17 2 0.28 1.67 GT 1.9899 AG 1.8892 0.0149 2641 0
ACYP2--EML6 43 0 43.00 0.00 ACYP2^ENSG00000170634.13 13762 chr2:54138748:+ EML6^ENSG00000214595.12 25725 chr2:54813232:+ ONLY_REF_SPLICE YES 114 1 0.38 22.00 GT 1.8062 AG 1.6402 0.16 1527 0
BAIAP2--CYP24A1 42 1 42.00 1.00 BAIAP2^ENSG00000175866.15 13823 chr17:81086580:+ CYP24A1^ENSG00000019186.10 36489 chr20:54165833:- ONLY_REF_SPLICE YES 1649 15 0.03 2.75 GT 1.7819 AG 1.8062 0.16 859 0
PCTP--AC015923.1 42 0 42.00 0.00 PCTP^ENSG00000141179.14 2545 chr17:55767452:+ AC015923.1^ENSG00000233635.2 17132 chr17:63339077:- INCL_NON_REF_SPLICE YES 87 0 0.49 43.00 GT 1.8892 AG 1.8295 0.1563 5127 0
PCTP--AC015923.1 3 0 3.00 0.00 PCTP^ENSG00000141179.14 2545 chr17:55767452:+ AC015923.1^ENSG00000233635.2 19396 chr17:63320491:- ONLY_REF_SPLICE YES 87 7 0.05 0.50 GT 1.8892 AG 1.8323 0.0112 3221 0
TLK2--AC240565.1 41 0 41.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 194 13 0.22 3.00 GT 1.8892 AG 1.8892 0.1526 1734 0
SEC23A--NELL1 35 0 35.00 0.00 SEC23A^ENSG00000100934.15 19070 chr14:39061765:- NELL1^ENSG00000165973.19 41711 chr11:20885444:+ ONLY_REF_SPLICE YES 310 11 0.12 3.00 GT 1.9656 AG 1.7819 0.1302 3108 0
NELL1--LUZP2 34 0 34.00 0.00 NELL1^ENSG00000165973.19 10443 chr11:20885540:+ LUZP2^ENSG00000187398.12 48479 chr11:24905991:+ ONLY_REF_SPLICE YES 8 3 3.89 8.75 GT 1.9086 AG 1.5546 0.1265 2394 0
RPTOR--DOK5 32 0 32.00 0.00 RPTOR^ENSG00000141564.15 1973 chr17:80545791:+ DOK5^ENSG00000101134.12 53836 chr20:54588483:+ ONLY_REF_SPLICE YES 1097 16 0.03 1.94 GT 1.6895 AG 1.8892 0.1191 231 0
GRB7--PRKD1 25 0 25.00 0.00 GRB7^ENSG00000141738.14 1207 chr17:39738133:+ PRKD1^ENSG00000184304.16 19786 chr14:29666208:- ONLY_REF_SPLICE YES 392 103 0.07 0.25 GT 1.7819 AG 1.6895 0.093 2424 0
GRB7--PRKD1 19 0 19.00 0.00 GRB7^ENSG00000141738.14 1466 chr17:39738392:+ PRKD1^ENSG00000184304.16 19786 chr14:29666208:- ONLY_REF_SPLICE YES 759 103 0.03 0.19 GT 1.8892 AG 1.6895 0.0707 2352 0
GTF2H1--SHANK2 24 0 24.00 0.00 GTF2H1^ENSG00000110768.12 10462 chr11:18341607:+ SHANK2^ENSG00000162105.20 41929 chr11:70896567:- ONLY_REF_SPLICE YES 319 308 0.08 0.08 GT 1.8295 AG 1.9656 0.0893 1179 0
VAPB--PTGIS 24 0 24.00 0.00 VAPB^ENSG00000124164.16 3265 chr20:58418363:+ PTGIS^ENSG00000124212.6 27794 chr20:49514395:- ONLY_REF_SPLICE YES 257 85 0.10 0.29 GT 1.8323 AG 1.9219 0.0893 3606 0
VAPB--PTGIS 1 0 1.00 0.00 VAPB^ENSG00000124164.16 4750 chr20:58431517:+ PTGIS^ENSG00000124212.6 27794 chr20:49514395:- ONLY_REF_SPLICE YES 226 85 0.01 0.02 GT 1.7819 AG 1.9219 0.0037 3336 0
VAPB--PTGIS 1 0 1.00 0.00 VAPB^ENSG00000124164.16 3265 chr20:58418363:+ PTGIS^ENSG00000124212.6 28928 chr20:49513261:- ONLY_REF_SPLICE YES 257 97 0.01 0.02 GT 1.8323 AG 1.8892 0.0037 2852 0
ARHGAP42--TTC12 22 0 22.00 0.00 ARHGAP42^ENSG00000165895.19 3699 chr11:100770438:+ TTC12^ENSG00000149292.17 51628 chr11:113341837:+ ONLY_REF_SPLICE YES 89 58 0.26 0.39 GT 1.5219 AG 1.8892 0.0819 6358 0
VGLL4--PRRT3 22 0 22.00 0.00 VGLL4^ENSG00000144560.15 7930 chr3:11702971:- PRRT3^ENSG00000163704.12 33566 chr3:9950172:- ONLY_REF_SPLICE YES 198 44 0.12 0.51 GT 1.8295 AG 1.9656 0.0819 1318 0
VGLL4--PRRT3 20 0 20.00 0.00 VGLL4^ENSG00000144560.15 13030 chr3:11643437:- PRRT3^ENSG00000163704.12 33566 chr3:9950172:- ONLY_REF_SPLICE YES 378 44 0.06 0.47 GT 1.9656 AG 1.9656 0.0744 1602 0
VGLL4--PRRT3 5 0 5.00 0.00 VGLL4^ENSG00000144560.15 7930 chr3:11702971:- PRRT3^ENSG00000163704.12 34825 chr3:9948913:- ONLY_REF_SPLICE YES 198 420 0.03 0.01 GT 1.8295 AG 1.6895 0.0186 254 0
STK32B--WDR1 19 0 19.00 0.00 STK32B^ENSG00000152953.13 2837 chr4:5139960:+ WDR1^ENSG00000071127.17 44212 chr4:10081444:- ONLY_REF_SPLICE YES 21 453 0.91 0.04 GT 1.5301 AG 1.8892 0.0707 3287 0
SDK2--NCOR1P2 13 0 13.00 0.00 SDK2^ENSG00000069188.17 4810 chr17:73472112:- NCOR1P2^ENSG00000265019.1 54540 chr17:22070612:- INCL_NON_REF_SPLICE YES 16 0 0.82 14.00 GT 1.8892 AG 1.9329 0.0484 10000 0
56 rows