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Filename
FFPE_HD835_01_RNA_0001_23LGNLLT4_3.FusionInspector.fusions.abridged.tsv
Full Path
s3://natera-platform-sandbox/pipeline-outputs/cgp_runs/nextflow/dev_rna_exp0005/A23LGNLLT4/nfcore_rnafusion__2cae617--20260515-145204/fusioninspector/FFPE_HD835_01_RNA_0001_23LGNLLT4_3.FusionInspector.fusions.abridged.tsv
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11.6 KB
Workflow Run
dev_rna_exp0005_2cae617
Published
May 16, 2026 7:16 AM

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#FusionName JunctionReadCount SpanningFragCount est_J est_S LeftGene LeftLocalBreakpoint LeftBreakpoint RightGene RightLocalBreakpoint RightBreakpoint SpliceType LargeAnchorSupport NumCounterFusionLeft NumCounterFusionRight FAR_left FAR_right LeftBreakDinuc LeftBreakEntropy RightBreakDinuc RightBreakEntropy FFPM microh_brkpt_dist num_microh_near_brkpt
PANK2--MAVS 1437 35 1437.00 34.43 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 976 131 1.51 11.16 GT 1.5656 AG 1.5628 4.9782 1183 0
PANK2--MAVS 84 2 84.00 0.11 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 976 1464 0.09 0.06 GT 1.5656 AG 1.8323 0.2846 68 1
PANK2--MAVS 18 0 18.00 0.00 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 25106 chr20:3861332:+ ONLY_REF_SPLICE YES 976 1645 0.02 0.01 GT 1.5656 AG 1.8323 0.0609 704 0
PANK2--MAVS 6 35 6.00 0.14 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 811 131 0.05 0.32 GT 1.8256 AG 1.5628 0.0208 1866 0
PANK2--MAVS 6 31 6.00 0.13 PANK2^ENSG00000125779.23 1881 chr20:3889719:+ MAVS^ENSG00000088888.18 22739 chr20:3854550:+ INCL_NON_REF_SPLICE YES 1210 97 0.03 0.39 AG 1.6402 TT 1.6895 0.0207 1191 0
PANK2--MAVS 5 33 5.00 0.11 PANK2^ENSG00000125779.23 1895 chr20:3889733:+ MAVS^ENSG00000088888.18 22753 chr20:3854564:+ INCL_NON_REF_SPLICE YES 975 176 0.04 0.22 TG 1.8062 GT 1.7056 0.0173 1178 0
PANK2--MAVS 3 35 3.00 0.07 PANK2^ENSG00000125779.23 2094 chr20:3889932:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 851 131 0.05 0.30 GT 1.6049 AG 1.5628 0.0103 1212 0
PANK2--MAVS 9 0 9.00 0.00 PANK2^ENSG00000125779.23 1890 chr20:3889728:+ MAVS^ENSG00000088888.18 26028 chr20:3862254:+ ONLY_REF_SPLICE YES 976 3012 0.01 0.00 GT 1.5656 AG 1.8892 0.0304 1017 0
PANK2--MAVS 5 2 5.00 0.01 PANK2^ENSG00000125779.23 2094 chr20:3889932:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 851 1464 0.01 0.01 GT 1.6049 AG 1.8323 0.0169 272 0
PANK2--MAVS 4 0 4.00 0.00 PANK2^ENSG00000125779.23 1066 chr20:3888904:+ MAVS^ENSG00000088888.18 22747 chr20:3854558:+ ONLY_REF_SPLICE YES 20 131 0.24 0.04 GT 1.7056 AG 1.5628 0.0135 1058 0
PANK2--MAVS 1 2 1.00 0.00 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 811 1464 0.00 0.00 GT 1.8256 AG 1.8323 0.0034 1444 0
PANK2--MAVS 1 0 1.00 0.00 PANK2^ENSG00000125779.23 3266 chr20:3891411:+ MAVS^ENSG00000088888.18 26028 chr20:3862254:+ ONLY_REF_SPLICE YES 811 3012 0.00 0.00 GT 1.8256 AG 1.8892 0.0034 92 1
PANK2--MAVS 1 0 1.00 0.00 PANK2^ENSG00000125779.23 1178 chr20:3889016:+ MAVS^ENSG00000088888.18 23931 chr20:3857635:+ ONLY_REF_SPLICE YES 50 1464 0.04 0.00 GT 1.4566 AG 1.8323 0.0034 342 0
TCF7L2--AL158212.1 778 27 778.00 19.81 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 3174 0 0.25 806.00 GT 1.9219 AG 1.8892 2.6992 3386 0
TCF7L2--AL158212.1 204 16 204.00 2.72 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 30959 chr10:112905977:+ ONLY_REF_SPLICE YES 3174 8 0.07 24.56 GT 1.9219 AG 1.9899 0.6994 3331 0
TCF7L2--AL158212.1 136 32 136.00 8.31 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 2282 0 0.07 169.00 GT 1.9086 AG 1.8892 0.4882 4477 0
TCF7L2--AL158212.1 43 16 43.00 0.57 TCF7L2^ENSG00000148737.17 4532 chr10:113040126:+ AL158212.1^ENSG00000225292.2 29852 chr10:112890966:+ ONLY_REF_SPLICE YES 3174 10 0.02 5.45 GT 1.9219 AG 1.9329 0.1474 3179 0
TCF7L2--AL158212.1 20 18 20.00 0.52 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 30959 chr10:112905977:+ ONLY_REF_SPLICE YES 2282 8 0.02 4.33 GT 1.9086 AG 1.9899 0.0695 3973 0
TCF7L2--AL158212.1 2 18 2.00 0.05 TCF7L2^ENSG00000148737.17 5676 chr10:113089540:+ AL158212.1^ENSG00000225292.2 29852 chr10:112890966:+ ONLY_REF_SPLICE NO 2282 10 0.01 1.91 GT 1.9086 AG 1.9329 0.007 4135 0
TCF7L2--AL158212.1 5 2 5.00 0.01 TCF7L2^ENSG00000148737.17 2361 chr10:112951607:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 4078 0 0.00 8.00 GT 1.2419 AG 1.8892 0.0169 1543 0
TCF7L2--AL158212.1 1 2 1.00 0.00 TCF7L2^ENSG00000148737.17 3430 chr10:112964624:+ AL158212.1^ENSG00000225292.2 28779 chr10:112888735:+ ONLY_REF_SPLICE YES 3831 0 0.00 4.00 GT 1.9899 AG 1.8892 0.0034 2382 0
COMMD10--AP3S1 382 20 382.00 19.76 COMMD10^ENSG00000145781.9 4949 chr5:116092700:+ AP3S1^ENSG00000177879.17 23931 chr5:115895087:+ ONLY_REF_SPLICE YES 781 5200 0.52 0.08 GT 1.9329 AG 1.8256 1.3593 1674 0
COMMD10--AP3S1 5 13 5.00 0.16 COMMD10^ENSG00000145781.9 4944 chr5:116092695:+ AP3S1^ENSG00000177879.17 23931 chr5:115895087:+ ONLY_REF_SPLICE YES 805 5200 0.02 0.00 GT 1.9086 AG 1.8256 0.0174 1670 0
COMMD10--AP3S1 8 1 8.00 0.02 COMMD10^ENSG00000145781.9 4949 chr5:116092700:+ AP3S1^ENSG00000177879.17 26148 chr5:115902885:+ ONLY_REF_SPLICE YES 781 5476 0.01 0.00 GT 1.9329 AG 1.7465 0.0272 1173 0
COMMD10--AP3S1 1 20 1.00 0.05 COMMD10^ENSG00000145781.9 6060 chr5:116134178:+ AP3S1^ENSG00000177879.17 21724 chr5:115866670:+ ONLY_REF_SPLICE YES 757 4416 0.03 0.00 GT 1.6729 AG 1.7232 0.0036 2027 0
SPAG9--MBTD1 206 4 206.00 3.60 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 59071 chr17:51201696:- ONLY_REF_SPLICE YES 1190 507 0.18 0.42 GT 1.7819 AG 1.6402 0.7091 3937 0
SPAG9--MBTD1 26 1 26.00 0.10 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 60176 chr17:51195361:- ONLY_REF_SPLICE YES 1190 703 0.02 0.04 GT 1.7819 AG 1.9219 0.0883 3426 0
SPAG9--MBTD1 25 0 25.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 61818 chr17:51193016:- ONLY_REF_SPLICE YES 1190 948 0.02 0.03 GT 1.7819 AG 1.9329 0.0846 2752 0
SPAG9--MBTD1 17 4 17.00 0.30 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 58690 chr17:51202077:- ONLY_REF_SPLICE YES 1190 432 0.02 0.05 GT 1.7819 AG 1.5546 0.0585 4168 0
SPAG9--MBTD1 6 0 6.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 61324 chr17:51193510:- ONLY_REF_SPLICE YES 1190 795 0.01 0.01 GT 1.7819 AG 1.8062 0.0203 3212 0
SPAG9--MBTD1 6 0 6.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 62554 chr17:51192280:- ONLY_REF_SPLICE YES 1190 1229 0.01 0.01 GT 1.7819 AG 1.6402 0.0203 2094 0
SPAG9--MBTD1 3 0 3.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 62005 chr17:51192829:- INCL_NON_REF_SPLICE YES 1190 1658 0.00 0.00 GT 1.7819 AG 1.7819 0.0101 2581 0
SPAG9--MBTD1 2 0 2.00 0.00 SPAG9^ENSG00000008294.21 1515 chr17:51120354:- MBTD1^ENSG00000011258.16 64251 chr17:51180694:- ONLY_REF_SPLICE YES 1190 553 0.00 0.01 GT 1.7819 AG 1.9086 0.0068 1078 0
AC005993.1--RGS6 177 3 177.00 1.21 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 7 39 22.62 4.53 GT 1.9656 AG 1.9086 0.6029 4013 0
AC005993.1--RGS6 142 11 142.00 6.82 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 39 77.00 3.85 GT 1.6402 AG 1.9086 0.5035 3057 0
AC005993.1--RGS6 74 8 74.00 2.00 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 39 27.67 2.08 GT 1.8892 AG 1.9086 0.2572 1167 0
AC005993.1--RGS6 19 8 19.00 0.51 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 2 39 9.33 0.70 GT 1.8892 AG 1.9086 0.066 1167 0
AC005993.1--RGS6 12 6 12.00 0.22 AC005993.1^ENSG00000266869.2 3571 chr14:71869984:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 7 39 2.38 0.47 GT 1.8062 AG 1.9086 0.0413 1819 0
AC005993.1--RGS6 3 11 3.00 0.14 AC005993.1^ENSG00000266869.2 9007 chr14:71919246:+ RGS6^ENSG00000182732.18 15196 chr14:71964772:+ ONLY_REF_SPLICE YES 1 39 7.50 0.38 GT 1.9329 AG 1.9086 0.0106 2463 0
AC005993.1--RGS6 4 3 4.00 0.05 AC005993.1^ENSG00000266869.2 7910 chr14:71916030:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 1 101 4.00 0.08 GT 1.6402 AG 1.8323 0.0137 2045 0
AC005993.1--RGS6 4 2 4.00 0.02 AC005993.1^ENSG00000266869.2 4841 chr14:71908434:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 2 101 2.33 0.07 GT 1.8892 AG 1.8323 0.0136 142 0
AC005993.1--RGS6 3 2 3.00 0.02 AC005993.1^ENSG00000266869.2 4837 chr14:71908430:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 2 101 2.00 0.06 GT 1.8892 AG 1.8323 0.0102 145 0
AC005993.1--RGS6 3 1 3.00 0.01 AC005993.1^ENSG00000266869.2 1131 chr14:71848736:+ RGS6^ENSG00000182732.18 16303 chr14:72352095:+ ONLY_REF_SPLICE YES 7 101 0.62 0.05 GT 1.9656 AG 1.8323 0.0101 3754 0
GUSBP13--NAIP 130 3 130.00 3.00 GUSBP13^ENSG00000198237.8 5633 chr5:69920867:+ NAIP^ENSG00000249437.8 14552 chr5:71003857:- ONLY_REF_SPLICE YES 0 44 134.00 2.98 GT 1.9329 AG 1.8295 0.4499 2864 0
GDPD5--MAP6 101 11 101.00 11.00 GDPD5^ENSG00000158555.15 12795 chr11:75477619:- MAP6^ENSG00000171533.12 38601 chr11:75608322:- ONLY_REF_SPLICE YES 546 1 0.21 56.50 GT 1.9086 AG 1.9086 0.3789 2164 0
GDPD5--MAP6 1 0 1.00 0.00 GDPD5^ENSG00000158555.15 8880 chr11:75490237:- MAP6^ENSG00000171533.12 38601 chr11:75608322:- ONLY_REF_SPLICE YES 55 1 0.04 1.00 GT 1.9086 AG 1.9086 0.0034 1498 0
ARHGAP29-AS1--NME2 66 0 66.00 0.00 ARHGAP29-AS1^ENSG00000226835.3 2423 chr1:94249519:+ NME2^ENSG00000243678.12 23405 chr17:51169937:+ ONLY_REF_SPLICE YES 0 5001 67.00 0.01 GT 1.8295 AG 1.5546 0.2233 1818 0
TLK2--AC240565.1 54 0 54.00 0.00 TLK2^ENSG00000146872.18 17137 chr17:62560126:+ AC240565.1^ENSG00000280136.2 41242 chr17:106864:- ONLY_REF_SPLICE YES 942 43 0.06 1.25 GT 1.8892 AG 1.8892 0.1827 1734 0
MIR4713HG--GLDN 26 5 26.00 3.30 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 1 31 16.00 1.00 GT 1.9329 AG 1.8892 0.0992 1224 0
MIR4713HG--GLDN 26 3 26.00 1.35 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 9468 chr15:51377449:+ ONLY_REF_SPLICE YES 2 31 10.00 0.94 GT 1.9656 AG 1.8892 0.0926 158 0
MIR4713HG--GLDN 8 1 8.00 0.11 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 10869 chr15:51383785:+ ONLY_REF_SPLICE YES 2 55 3.33 0.18 GT 1.9656 AG 1.7056 0.0275 477 0
MIR4713HG--GLDN 3 2 3.00 0.13 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 10520 chr15:51383436:+ ONLY_REF_SPLICE YES 1 45 3.00 0.13 GT 1.9329 AG 1.9219 0.0105 1374 0
MIR4713HG--GLDN 2 2 2.00 0.09 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 10869 chr15:51383785:+ ONLY_REF_SPLICE YES 1 55 2.50 0.09 GT 1.9329 AG 1.7056 0.0071 1197 0
MIR4713HG--GLDN 1 1 1.00 0.01 MIR4713HG^ENSG00000259240.1 1194 chr15:51037681:+ GLDN^ENSG00000186417.14 10520 chr15:51383436:+ ONLY_REF_SPLICE YES 2 45 1.00 0.07 GT 1.9656 AG 1.9219 0.0034 826 0
MIR4713HG--GLDN 1 0 1.00 0.00 MIR4713HG^ENSG00000259240.1 2262 chr15:51278050:+ GLDN^ENSG00000186417.14 13637 chr15:51394835:+ ONLY_REF_SPLICE YES 1 48 1.00 0.04 GT 1.9329 AG 1.9219 0.0034 2532 0
PALLD--PPM1D 21 1 21.00 1.00 PALLD^ENSG00000129116.19 19562 chr4:168711923:+ PPM1D^ENSG00000170836.12 47789 chr17:60656599:+ ONLY_REF_SPLICE YES 57 448 0.40 0.05 GT 1.6895 AG 1.8323 0.0744 1456 0
PALLD--PPM1D 1 0 1.00 0.00 PALLD^ENSG00000129116.19 19562 chr4:168711923:+ PPM1D^ENSG00000170836.12 49233 chr17:60662995:+ ONLY_REF_SPLICE YES 57 493 0.03 0.00 GT 1.6895 AG 1.8892 0.0034 1004 0
CDKAL1--E2F3 5 0 5.00 0.00 CDKAL1^ENSG00000145996.11 4234 chr6:20548705:+ E2F3^ENSG00000112242.15 27384 chr6:20479846:+ ONLY_REF_SPLICE YES 562 399 0.01 0.01 GT 1.7968 AG 1.7819 0.0169 1652 0
59 rows